Feature ID Fold Change (original values) P-value Target description GO biological process RPKM RPKM Sig Fold Both ruditapes_c16723 1.42 0 "562,393.87" "798,410.39" y n n ruditapes2_c3039 1.046 0 "202,895.89" "212,315.80" y n n ruditapes_c703 6.474 0 structural polyprotein "3,031.72" "19,627.86" y y y ruditapes2_c895 -1.883 0 cytochrome c oxidase subunit ii /// 0044464 // cell part "24,122.63" "12,812.21" y y y ruditapes2_c462 1.622 0 cytochrome oxidase subunit 1 /// 0009060 // aerobic respiration /// 0006810 // transport /// 0022900 // electron transport chain /// 0005507 // copper ion binding /// 0004129 // cytochrome-c oxidase activity /// 0020037 // heme binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity "7,131.09" "11,566.32" y y y ruditapes_c21056 -5.583 0 cytochrome c subunit ii /// 0006810 // transport /// 0005507 // copper ion binding /// 0004129 // cytochrome-c oxidase activity /// 0020037 // heme binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity /// 0022904 // respiratory electron transport chain "31,697.62" "5,677.87" y y y ruditapes_c17608 -2.542 0 nadh dehydrogenase subunit 6 /// 0044464 // cell part "9,626.47" "3,787.42" y y y ruditapes_c6314 2.265 0 cytochrome b /// 0006810 // transport /// 0005739 // mitochondrion /// 0016491 // oxidoreductase activity /// 0016021 // integral to membrane /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0022904 // respiratory electron transport chain "1,367.12" "3,096.90" y y y ruditapes_lrc11082 -3.799 0 "8,165.07" "2,149.31" y y y ruditapes2_lrc3255 -3.139 0 beta tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement "5,221.68" "1,663.26" y y y ruditapes_lrc16609 -6.922 0 "3,894.19" 562.617 y y y ruditapes2_lrc3558 1.842 0 ferritin /// 0046914 // transition metal ion binding 283.324 521.948 y y y ruditapes_c6080 2.465 0 163.676 403.543 y y y ruditapes_c20446 -6.845 0 "2,678.09" 391.266 y y y ruditapes2_c4794 2.589 0 ribosomal protein s12 /// 0006414 // translational elongation /// 0005739 // mitochondrion /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 133.733 346.247 y y y ruditapes_lrc33763 -7.36 0 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis "2,441.77" 331.783 y y y ruditapes_lrc33929 -10.334 0 ribosomal protein s27a /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0006414 // translational elongation /// 0046872 // metal ion binding /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0022627 // cytosolic small ribosomal subunit /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction "2,615.29" 253.065 y y y ruditapes_lrc34610 -21.475 4.44E-308 "1,621.69" 75.515 y y y ruditapes_c31191 -1.534 1.12E-303 nadh dehydrogenase subunit 4 /// 0005739 // mitochondrion /// 0016020 // membrane /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0042773 // ATP synthesis coupled electron transport "19,257.57" "12,550.10" y y y ruditapes2_c203 -3.171 2.14E-295 cg12324 protein /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit "3,814.89" "1,202.95" y y y ruditapes2_c202 -2.338 7.68E-294 cytochrome c subunit ii /// 0046914 // transition metal ion binding /// 0022900 // electron transport chain /// 0005739 // mitochondrion /// 0016020 // membrane "5,916.35" "2,530.62" y y y ruditapes2_lrc4701 -5.979 4.37E-292 tubulin beta-2c chain "2,253.78" 376.959 y y y ruditapes_c60 -1.364 2.06E-291 cytochrome oxidase subunit 1 /// 0009060 // aerobic respiration /// 0006810 // transport /// 0022900 // electron transport chain /// 0005507 // copper ion binding /// 0004129 // cytochrome-c oxidase activity /// 0020037 // heme binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity "33,161.14" "24,315.91" y n n ruditapes_c8977 -1.434 7.41E-198 cytochrome c oxidase subunit iii "/// 0005739 // mitochondrion /// 0004129 // cytochrome-c oxidase activity /// 0006123 // mitochondrial electron transport, cytochrome c to oxygen /// 0016021 // integral to membrane" "17,121.02" "11,937.20" y n n ruditapes_c10385 -8.781 6.51E-197 "1,274.62" 145.149 y y y ruditapes_lrc33521 -9.955 2.11E-189 "1,174.47" 117.98 y y y ruditapes_c14344 -77.328 1.38E-184 872.825 11.287 y y y ruditapes2_c361 -3.95 1.23E-175 ribosomal protein l19 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome "1,805.49" 457.13 y y y ruditapes2_lrc3291 -5.138 3.83E-162 "1,362.69" 265.216 y y y ruditapes_lrc35442 -30.99 1.54E-145 727.857 23.487 y y y ruditapes_c16177 -5.476 2.96E-144 "1,163.08" 212.414 y y y ruditapes_c34318 -6.937 1.51E-139 heat shock protein 70 991.347 142.912 y y y ruditapes_c7084 -7.597 7.24E-135 919.678 121.051 y y y ruditapes_lrc31880 -5.746 2.33E-122 956.513 166.462 y y y ruditapes2_lrc4170 -5.825 3.37E-121 beta 2c /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 940.004 161.385 y y y ruditapes_lrc32357 -7.264 2.05E-120 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 835.816 115.068 y y y ruditapes_c2726 -42.859 8.38E-115 rCG56563 [Rattus norvegicus] 556.635 12.988 y y y ruditapes_lrc22915 -3.248 1.52E-111 "1,387.10" 427.104 y y y ruditapes_c26049 -12.904 1.64E-107 615.373 47.687 y y y ruditapes_lrc6963 -4.495 3.45E-107 983.763 218.861 y y y ruditapes2_c318 -2.812 3.79E-105 ribosomal protein l34a /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome "1,564.60" 556.473 y y y ruditapes_lrc19908 -10.955 2.99E-102 610.526 55.73 y y y ruditapes2_c29 -1.19 1.49E-95 cytochrome b /// 0055114 // oxidation reduction /// 0044464 // cell part "33,023.63" "27,761.91" y n n ruditapes2_c587 -1.645 1.51E-88 nadh dehydrogenase subunit 2 /// 0005739 // mitochondrion /// 0042773 // ATP synthesis coupled electron transport /// 0016491 // oxidoreductase activity "4,264.86" "2,592.99" y y y ruditapes_lrc33495 -3.702 2.26E-88 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 954.064 257.719 y y y ruditapes_c28006 -2.875 1.96E-84 cytochrome c subunit ii /// 0046914 // transition metal ion binding /// 0022900 // electron transport chain /// 0005739 // mitochondrion /// 0016020 // membrane "1,213.35" 421.985 y y y ruditapes2_c4477 -7.535 2.46E-83 565.205 75.011 y y y ruditapes_c30305 -19.02 6.06E-82 431.674 22.695 y y y ruditapes2_c4099 -2.742 6.19E-82 60s acidic ribosomal protein p1 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome "1,256.39" 458.178 y y y ruditapes2_c40 -2.303 6.32E-81 ribosomal protein s28 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit "1,648.95" 716.061 y y y ruditapes_c12803 -4.654 8.25E-80 alpha 3d /// 0005929 // cilium /// 0005932 // microtubule basal body /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 709.327 152.402 y y y ruditapes_lrc25342 -4.235 1.11E-75 ribosomal protein s7 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 722.647 170.655 y y y ruditapes_lrc25392 -4.879 2.71E-74 637.448 130.664 y y y ruditapes2_c147 -3.191 1.30E-71 heat shock protein 70 900.089 282.051 y y y ruditapes_lrc31148 -5.835 1.17E-70 beta 2c /// 0005488 // binding /// 0009987 // cellular process 541.3 92.77 y y y ruditapes_lrc33484 -28.591 4.21E-69 cg12324 protein /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation 343.348 12.009 y y y ruditapes_c28797 -4.411 1.40E-68 632.296 143.359 y y y ruditapes_lrc33808 -2.844 2.94E-68 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 990.141 348.119 y y y ruditapes_lrc34074 -4.226 2.65E-65 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 622.09 147.197 y y y ruditapes_c455 -3.156 7.00E-65 823.836 261.022 y y y ruditapes2_c6484 -2.265 5.34E-63 "1,315.34" 580.639 y y y ruditapes_lrc11527 -2.98 7.78E-63 855.082 286.895 y y y ruditapes2_c3534 -5.417 5.79E-61 phosphatase 2a inhibitor i2pp2a /// 0044424 // intracellular part 485.844 89.684 y y y ruditapes2_lrc3105 -2.673 2.59E-60 beta-tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 951.822 356.027 y y y ruditapes2_lrc3006 -13.477 1.55E-56 315.21 23.388 y y y ruditapes_c7470 -3.273 2.18E-56 683.721 208.906 y y y ruditapes_c1897 -2.946 1.28E-55 ribosomal protein l37 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol 765.425 259.845 y y y ruditapes2_lrc4792 -4.723 1.52E-55 translationally controlled tumor protein 483.453 102.363 y y y ruditapes_c9763 -3.016 2.55E-55 738.722 244.949 y y y ruditapes2_c272 -7.897 2.71E-53 e2f-associated phosphoprotein 349.967 44.315 y y y ruditapes2_lrc3379 -3.201 6.68E-53 tubulin beta-2c chain /// 0000166 // nucleotide binding /// 0007017 // microtubule-based process 656.384 205.028 y y y ruditapes2_c2549 -16.454 3.70E-52 278.147 16.905 y y y ruditapes2_lrc2615 -1.965 7.16E-52 ribosomal protein s24 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0034101 // erythrocyte homeostasis /// 0042274 // ribosomal small subunit biogenesis /// 0031369 // translation initiation factor binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit "1,461.97" 743.862 y y y ruditapes_c5471 -8.285 5.31E-51 328.11 39.601 y y y ruditapes_lrc15708 -2.409 1.23E-49 beta-tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 919.609 381.746 y y y ruditapes2_c46 -1.725 2.21E-48 elongation factor 2 /// 0006414 // translational elongation /// 0042221 // response to chemical stimulus /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0003746 // translation elongation factor activity "1,952.73" "1,131.71" y y y ruditapes2_c956 -2.966 3.90E-48 ribosomal protein l19 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 653.318 220.289 y y y ruditapes2_c1535 -3.588 2.57E-47 517.141 144.12 y y y ruditapes_c31018 -2.676 4.54E-47 735.557 274.898 y y y ruditapes_c31146 -4.245 1.12E-45 428.296 100.892 y y y ruditapes2_lrc1556 -4.105 8.27E-45 431.716 105.168 y y y ruditapes_lrc34142 -6.659 3.56E-44 mitochondrial atp synthase gamma-subunit "/// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 310.786 46.672 y y y ruditapes_c9948 -12.18 5.32E-44 249.123 20.453 y y y ruditapes_lrc6872 -3.306 1.09E-43 60s ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0000166 // nucleotide binding /// 0003735 // structural constituent of ribosome 518.849 156.925 y y y ruditapes2_c404 -3.207 1.11E-43 dead box atp-dependent rna 536.973 167.438 y y y ruditapes_c27053 -6.346 1.03E-42 307.405 48.439 y y y ruditapes_c1786 -3.078 4.46E-42 542.22 176.159 y y y ruditapes_c9075 -9.514 1.73E-41 251.926 26.48 y y y ruditapes2_lrc5355 -3.194 4.31E-40 493.418 154.506 y y y ruditapes_c527 -2.462 7.09E-40 ribosomal protein l15 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 705.456 286.52 y y y ruditapes_lrc34342 -2.654 2.38E-39 ribosomal protein s4 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0007420 // brain development /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 617.703 232.726 y y y ruditapes_lrc34670 -4.705 2.68E-38 ribosomal protein s6 /// 0005811 // lipid particle /// 0005840 // ribosome /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 329.383 70.013 y y y ruditapes_c22731 -2.427 3.20E-38 691.719 285.059 y y y ruditapes2_lrc4797 -2.113 1.26E-37 ribosomal protein s7 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 886.719 419.601 y y y ruditapes2_c647 -2.922 5.05E-37 arginine kinase /// 0000166 // nucleotide binding /// 0016301 // kinase activity 506.463 173.312 y y y ruditapes_c1461 -3.059 5.06E-37 477.83 156.184 y y y ruditapes_c1500 -4.274 5.46E-37 341.735 79.954 y y y ruditapes2_c255 -2.33 8.22E-37 ribosomal protein l36a /// 0042221 // response to chemical stimulus /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 714.617 306.731 y y y ruditapes_c4349 -2.418 6.11E-36 652.281 269.718 y y y ruditapes2_c1514 -3.305 6.24E-36 423.119 128.024 y y y ruditapes2_lrc5756 -7.108 1.32E-35 240.545 33.842 y y y ruditapes2_c393 -1.788 9.97E-34 "1,200.96" 671.504 y y y ruditapes2_c439 -4.905 1.29E-33 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 278.929 56.871 y y y ruditapes_c28295 -16.06 1.68E-33 176.045 10.962 y y y ruditapes_c25489 -15.683 4.65E-33 174.4 11.12 y y y ruditapes_c2264 -7.717 8.13E-33 peptidyl-prolyl cis-trans isomerase /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 212.987 27.6 y y y ruditapes_lrc31742 -3.584 3.20E-32 basic transcription factor 3-like 4 346.344 96.632 y y y ruditapes_lrc33927 -3.107 1.38E-31 ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0000166 // nucleotide binding /// 0003735 // structural constituent of ribosome 396.788 127.703 y y y ruditapes_lrc11074 -1.714 3.26E-31 ribosomal protein l36 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome "1,261.43" 735.99 y y y ruditapes_c21768 -6.086 3.55E-31 225.842 37.109 y y y ruditapes_c1860 -9.518 7.33E-31 184.604 19.396 y y y ruditapes_c3516 -4.663 8.43E-31 263.618 56.539 y y y ruditapes_c16120 -7.554 8.49E-31 200.98 26.606 y y y ruditapes2_c3229 -5.991 1.99E-30 cyclophilin-type peptidyl-prolyl cis-trans isomerase /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 222.006 37.057 y y y ruditapes2_lrc4656 -3.097 4.88E-30 40s ribosomal protein s8 /// 0044424 // intracellular part 377.691 121.945 y y y ruditapes_c3551 -3.498 1.19E-29 325.129 92.939 y y y ruditapes_c25332 -6.789 2.97E-29 199.724 29.419 y y y ruditapes_c26769 -7.444 4.94E-29 189.989 25.522 y y y ruditapes_lrc22894 -11.855 7.67E-29 160.975 13.578 y y y ruditapes2_c1163 -2.996 5.50E-28 365.058 121.843 y y y ruditapes2_c797 -4.224 8.28E-28 255.318 60.442 y y y ruditapes_c2774 -3.944 1.08E-27 269.547 68.342 y y y ruditapes_c2865 -7.102 1.25E-27 184.055 25.915 y y y ruditapes2_c1029 -3.321 1.38E-27 318.356 95.87 y y y ruditapes_c25596 -8.076 1.51E-27 173.734 21.512 y y y ruditapes_c14234 -4.922 1.52E-27 225.37 45.79 y y y ruditapes_lrc33380 -8.463 1.66E-27 40s ribosomal protein s2 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005654 // nucleoplasm /// 0048604 // fibroblast growth factor 3 binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0048602 // fibroblast growth factor 1 binding 170.345 20.129 y y y ruditapes2_c259 -2.046 3.60E-27 ribosomal protein s18 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006417 // regulation of translation 675.003 329.838 y y y ruditapes2_c1891 -6.347 5.42E-27 189.59 29.871 y y y ruditapes_lrc31621 -11.573 7.77E-27 150.064 12.966 y y y ruditapes_c7635 -11.451 1.74E-26 148.407 12.96 y y y ruditapes_lrc32438 -3.381 1.83E-26 298.659 88.328 y y y ruditapes_c31329 -3.928 2.15E-26 257.047 65.445 y y y ruditapes_c4820 -2.288 2.19E-26 519.682 227.118 y y y ruditapes_lrc14126 -2.611 2.42E-26 414.752 158.875 y y y ruditapes2_c527 -3.16 7.75E-26 314.203 99.435 y y y ruditapes_lrc32788 -2.024 8.99E-26 ribosomal protein l26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 654.384 323.308 y y y ruditapes_c31438 -6.616 2.20E-25 173.895 26.286 y y y ruditapes_lrc32454 -2.298 2.42E-25 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 493.826 214.9 y y y ruditapes2_lrc5088 -2.201 3.22E-25 ribosomal protein l13 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 533.868 242.555 y y y ruditapes_c15795 -3.218 3.45E-25 299.389 93.041 y y y ruditapes2_c3783 -1.356 4.74E-25 cytochrome c oxidase subunit ii /// 0046914 // transition metal ion binding /// 0022900 // electron transport chain /// 0005739 // mitochondrion /// 0016020 // membrane "2,809.09" "2,071.34" y n n ruditapes_lrc33496 -8.369 6.15E-25 154.076 18.411 y y y ruditapes_c17098 -6.743 1.22E-24 166.905 24.751 y y y ruditapes2_c4998 -1.796 1.52E-24 ribosomal protein l34a /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 847.248 471.832 y y y ruditapes2_c1543 -2.732 1.64E-24 beta 2b /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0007017 // microtubule-based process 359.045 131.446 y y y ruditapes_lrc20511 -6.804 2.06E-24 26s proteasome regulatory subunit t3 /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0001824 // blastocyst development /// 0005829 // cytosol 164.536 24.181 y y y ruditapes_c1304 -2.813 2.37E-24 342.038 121.59 y y y ruditapes2_c801 -3.786 2.84E-24 243.066 64.201 y y y ruditapes_lrc33994 -2.264 2.87E-24 small subunit ribosomal protein 25 /// 0005840 // ribosome 484.751 214.077 y y y ruditapes2_lrc4098 -1.648 6.21E-24 ribosomal protein s27a /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0006414 // translational elongation /// 0046872 // metal ion binding /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0022627 // cytosolic small ribosomal subunit /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction "1,085.79" 658.96 y y y ruditapes_c31322 -3.177 6.27E-24 287.629 90.54 y y y ruditapes2_lrc5397 -2.526 9.87E-24 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 390.529 154.573 y y y ruditapes_c30595 -4.084 1.54E-23 219.795 53.819 y y y ruditapes2_c4732 -1.821 1.78E-23 nadh dehydrogenase subunit 4l 775.937 426.109 y y y ruditapes2_c671 -10.224 2.03E-23 134.47 13.153 y y y ruditapes_s33853 -4.5 3.11E-23 200.438 44.541 y y y ruditapes_c9783 -6.442 3.25E-23 160.134 24.86 y y y ruditapes_c3824 -1.434 5.09E-23 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding "1,875.16" "1,307.65" y n n ruditapes2_lrc3597 -8.736 5.16E-23 139.122 15.925 y y y ruditapes2_c3108 -1.846 5.23E-23 ribosomal protein x-linked /// 0006414 // translational elongation /// 0008284 // positive regulation of cell proliferation /// 0045727 // positive regulation of translation /// 0019843 // rRNA binding /// 0005844 // polysome /// 0007420 // brain development /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0009790 // embryonic development 731.28 396.205 y y y ruditapes2_c886 -1.963 6.42E-23 620.97 316.403 y y y ruditapes_c10084 -4.741 8.41E-23 camp response element-binding protein 5 189.009 39.863 y y y ruditapes_lrc34654 -3.261 8.73E-23 60s ribosomal protein l32 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 264.838 81.222 y y y ruditapes_c13495 -6.54 9.73E-23 155.421 23.764 y y y ruditapes2_c1194 -3.128 1.11E-22 276.575 88.424 y y y ruditapes_s36828 -3.84 1.17E-22 ribosomal protein l9 222.813 58.025 y y y ruditapes2_lrc5217 -3.994 2.26E-22 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 212.142 53.113 y y y ruditapes_lrc12434 -2.606 3.97E-22 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 345.005 132.397 y y y ruditapes_lrc33561 -3.239 4.36E-22 ribosomal protein l4 /// 0030529 // ribonucleoprotein complex /// 0005488 // binding /// 0006412 // translation /// 0005829 // cytosol 258.086 79.689 y y y ruditapes2_c1734 -3.029 4.63E-22 279.162 92.164 y y y ruditapes_c27256 -6.721 4.84E-22 148.295 22.064 y y y ruditapes_c7335 -6.127 9.50E-22 153.213 25.005 y y y ruditapes_c19262 -2.948 1.37E-21 solute carrier family anion member 1 /// 0005452 // inorganic anion exchanger activity /// 0016021 // integral to membrane /// 0006820 // anion transport /// 0030097 // hemopoiesis 282.253 95.738 y y y ruditapes2_lrc3145 -2.004 1.81E-21 alpha 8 like 4 550.254 274.538 y y y ruditapes2_lrc3184 -2.841 2.02E-21 294.004 103.497 y y y ruditapes_c2749 -4.934 2.31E-21 171.34 34.726 y y y ruditapes2_c109 -6.813 2.39E-21 hypothetical protein BRAFLDRAFT_123087 [Branchiostoma floridae] 142.331 20.89 y y y ruditapes_c13828 -5.637 4.65E-21 155.054 27.505 y y y ruditapes2_lrc4394 -2.012 6.87E-21 ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 529.238 262.998 y y y ruditapes_lrc36546 -1.465 8.16E-21 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding "1,514.04" "1,033.61" y n n ruditapes2_c69 -2.803 1.04E-20 288.745 103.021 y y y ruditapes_c2465 -8.458 1.75E-20 major surface protein 1a 124.164 14.68 y y y ruditapes2_lrc3869 -1.964 1.91E-20 ribosomal protein l7 547.901 278.951 y y y ruditapes_c15593 -5.012 2.46E-20 160.745 32.074 y y y ruditapes_c4765 -7.573 2.51E-20 128.709 16.996 y y y ruditapes_lrc33877 -3.51 3.38E-20 214.706 61.162 y y y ruditapes2_c3020 -6.075 4.28E-20 141.304 23.261 y y y ruditapes2_c773 -1.819 4.31E-20 ribosomal protein s21 /// 0006414 // translational elongation /// 0047485 // protein N-terminus binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0043022 // ribosome binding 658.166 361.862 y y y ruditapes_c28871 -7.902 4.36E-20 124.833 15.797 y y y ruditapes2_c311 -4.445 4.80E-20 172.538 38.82 y y y ruditapes_c32073 -3.46 5.02E-20 215.929 62.403 y y y ruditapes_c9743 -16.221 7.55E-20 zinc finger protein 316 100.438 6.192 y y y ruditapes_c6697 -3.97 7.90E-20 187.176 47.148 y y y ruditapes_lrc33333 -3.081 7.90E-20 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 243.567 79.055 y y y ruditapes_c28882 -2.396 8.31E-20 351.111 146.524 y y y ruditapes2_lrc3739 -6.899 1.11E-19 129.575 18.782 y y y ruditapes2_c1060 -2.205 1.18E-19 406.836 184.539 y y y ruditapes_c5211 -4.215 1.55E-19 175.018 41.524 y y y ruditapes_c22695 -1.758 2.01E-19 701.539 399.138 y y y ruditapes_c7069 -2.039 2.12E-19 473.634 232.245 y y y ruditapes_c28083 -3.426 2.35E-19 210.308 61.391 y y y ruditapes_c960 -2.48 3.12E-19 320.68 129.29 y y y ruditapes2_c4695 -8.095 3.34E-19 ribosomal protein s6 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006955 // immune response 117.729 14.543 y y y ruditapes_lrc33867 -4.862 3.40E-19 154.126 31.702 y y y ruditapes_c422 -2.104 3.77E-19 ribosomal protein l35 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 435.901 207.214 y y y ruditapes_lrc36325 -5.98 3.79E-19 135.236 22.616 y y y ruditapes_c7142 -6.483 3.80E-19 129.597 19.989 y y y ruditapes_lrc33892 -1.772 3.84E-19 ribosomal protein l11 /// 0006414 // translational elongation /// 0002119 // nematode larval development /// 0006605 // protein targeting /// 0040010 // positive regulation of growth rate /// 0005730 // nucleolus /// 0000003 // reproduction /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 673.35 379.919 y y y ruditapes_lrc8074 -8.118 4.88E-19 ribosomal protein s6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 116.501 14.351 y y y ruditapes_c5291 -2.572 5.34E-19 298.559 116.103 y y y ruditapes2_c1908 -1.952 5.47E-19 513.422 263.035 y y y ruditapes_c30823 -5.128 8.39E-19 145.385 28.353 y y y ruditapes_c9155 -1.723 1.29E-18 712.148 413.227 y y y ruditapes_c29177 -3.741 1.40E-18 184.11 49.213 y y y ruditapes_lrc38343 -4.106 1.48E-18 169.151 41.201 y y y ruditapes2_lrc4851 -2.577 1.69E-18 ribosomal protein s27a /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0006414 // translational elongation /// 0046872 // metal ion binding /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0022627 // cytosolic small ribosomal subunit /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction 288.983 112.131 y y y ruditapes2_lrc3596 -2.156 2.23E-18 tubulin alpha-3 /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 395.635 183.507 y y y ruditapes_c2738 -4.486 2.40E-18 155.553 34.674 y y y ruditapes_c32066 -7.076 4.45E-18 116.719 16.496 y y y ruditapes_lrc35949 -2.269 4.94E-18 60s ribosomal protein l6 /// 0030529 // ribonucleoprotein complex 350.136 154.316 y y y ruditapes2_lrc3246 -1.761 6.61E-18 alpha-tubulin /// 0007638 // mechanosensory behavior /// 0005874 // microtubule /// 0007017 // microtubule-based process 638.292 362.469 y y y ruditapes_c23106 -6.115 8.43E-18 123.369 20.175 y y y ruditapes_lrc12146 -3.428 8.92E-18 ribosomal protein s7 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 191.477 55.85 y y y ruditapes2_c984 -4.255 1.58E-17 154.275 36.258 y y y ruditapes_c19807 -3.059 1.68E-17 214.408 70.088 y y y ruditapes_c8699 -3.948 1.76E-17 163.932 41.522 y y y ruditapes2_c3278 -1.755 1.80E-17 ribosomal protein s21 /// 0006414 // translational elongation /// 0047485 // protein N-terminus binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0043022 // ribosome binding 627.433 357.448 y y y ruditapes2_lrc5426 -3.664 2.44E-17 174.139 47.523 y y y ruditapes_c13542 -2.258 3.02E-17 336.435 148.971 y y y ruditapes2_c365 -3.936 3.25E-17 161.62 41.061 y y y ruditapes_c12749 -6.708 4.77E-17 112.224 16.729 y y y ruditapes_lrc16810 -10.262 4.97E-17 95.026 9.26 y y y ruditapes_c30303 -2.936 5.24E-17 218.86 74.549 y y y ruditapes2_c1517 -4.387 5.47E-17 145.481 33.163 y y y ruditapes_c8528 -4.474 6.48E-17 142.605 31.877 y y y ruditapes2_lrc4165 -6.187 6.54E-17 ribosomal protein l8 /// 0044424 // intracellular part 115.888 18.731 y y y ruditapes2_c786 -2.6 7.03E-17 257.847 99.178 y y y ruditapes_lrc32805 -4.515 9.19E-17 140.216 31.057 y y y ruditapes_c11071 -5.356 9.26E-17 124.657 23.274 y y y ruditapes_c9054 -2.868 9.65E-17 221.899 77.384 y y y ruditapes_lrc32467 -4.478 9.69E-17 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 140.891 31.466 y y y ruditapes_c4924 -2.115 1.22E-16 369.381 174.636 y y y ruditapes_lrc35089 -3.11 1.23E-16 198.754 63.911 y y y ruditapes2_c188 -3.212 1.24E-16 ribosomal protein s2 /// 0031981 // nuclear lumen /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0017134 // fibroblast growth factor binding /// 0005829 // cytosol 191.335 59.574 y y y ruditapes_lrc33823 -6.272 1.40E-16 112.583 17.95 y y y ruditapes2_lrc3875 -18.398 1.72E-16 80.18 4.358 y y y ruditapes_lrc39062 -2.567 1.90E-16 ribosomal protein l32 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 255.67 99.612 y y y ruditapes2_c1356 -3.929 1.95E-16 tropomyosin 153.844 39.156 y y y ruditapes_c8589 -4.252 2.50E-16 142.767 33.574 y y y ruditapes2_c1511 -4.206 2.64E-16 143.815 34.19 y y y ruditapes_c3869 -2.279 3.50E-16 ribosomal protein l3 /// 0000022 // mitotic spindle elongation /// 0022626 // cytosolic ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 308.231 135.239 y y y ruditapes_c4057 -9.418 3.92E-16 92.03 9.772 y y y ruditapes_c6964 -2.523 4.05E-16 256.939 101.831 y y y ruditapes_c6415 -3.072 4.07E-16 194.771 63.394 y y y ruditapes_c16151 -2.541 4.18E-16 253.854 99.914 y y y ruditapes_lrc39036 -11.196 4.67E-16 86.809 7.754 y y y ruditapes_c23278 -2.517 4.94E-16 256.486 101.915 y y y ruditapes_c11596 -2.416 5.37E-16 predicted protein [Nematostella vectensis] 273.821 113.316 y y y ruditapes2_c1161 -2.889 5.62E-16 208.686 72.246 y y y ruditapes_lrc7516 -2.233 7.77E-16 laminin receptor 1 /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0004872 // receptor activity 312.911 140.109 y y y ruditapes_c7789 -3.613 9.30E-16 158.924 43.991 y y y ruditapes2_c2950 -4.41 1.17E-15 132.429 30.03 y y y ruditapes2_c2931 -3.108 1.19E-15 185.906 59.809 y y y ruditapes_lrc38595 -5.121 1.22E-15 ribosomal protein s16 /// 0044424 // intracellular part 118.853 23.21 y y y ruditapes2_c1683 -4.23 1.27E-15 thermoresistant gluconokinase family protein 136.555 32.283 y y y ruditapes_c15871 -2.488 1.31E-15 253.68 101.956 y y y ruditapes_c4188 -6.313 2.42E-15 102.982 16.312 y y y ruditapes2_c1340 -6.719 3.23E-15 98.906 14.72 y y y ruditapes2_c511 -2.317 3.73E-15 278.024 120.008 y y y ruditapes_lrc23215 -2.66 3.95E-15 220.645 82.942 y y y ruditapes_c13252 -4.314 3.99E-15 129.644 30.05 y y y ruditapes_c29576 -2.717 4.10E-15 213.604 78.609 y y y ruditapes2_lrc4717 -3.29 4.50E-15 translationally controlled tumor protein 166.947 50.746 y y y ruditapes_c6576 -3.423 4.55E-15 159.847 46.701 y y y ruditapes_lrc33749 -1.878 4.81E-15 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 438.875 233.717 y y y ruditapes2_lrc7347 -2.749 6.51E-15 206.918 75.257 y y y ruditapes_c2499 -3.846 7.18E-15 140.38 36.501 y y y ruditapes_c2998 -2.994 7.51E-15 183.677 61.346 y y y ruditapes_lrc33589 -2.543 8.05E-15 beta 2c /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 231.134 90.883 y y y ruditapes2_c1439 -2.897 8.29E-15 191.053 65.943 y y y ruditapes2_c274 -3.095 8.61E-15 175.533 56.72 y y y ruditapes_c9920 -3.847 1.05E-14 138.625 36.034 y y y ruditapes2_c681 -1.784 1.18E-14 heterogeneous nuclear ribonucleoprotein d-like /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0005515 // protein binding /// 0010467 // gene expression /// 0003723 // RNA binding /// 0016070 // RNA metabolic process /// 0043566 // structure-specific DNA binding 492.012 275.777 y y y ruditapes_c13742 -2.698 1.32E-14 207.792 77.017 y y y ruditapes2_c33 1.664 1.42E-14 348.244 579.609 y y y ruditapes_lrc32217 -15.19 1.53E-14 atp synthase beta subunit "/// 0005524 // ATP binding /// 0043499 // eukaryotic cell surface binding /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0001525 // angiogenesis /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0005754 // mitochondrial proton-transporting ATP synthase, catalytic core /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0051453 // regulation of intracellular pH /// 0042288 // MHC class I protein binding /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 72.265 4.757 y y y ruditapes2_c1 -1.187 1.53E-14 elongation factor 1 alpha "4,736.35" "3,990.21" y n n ruditapes_c13405 -5.013 1.58E-14 111.035 22.149 y y y ruditapes2_c142 -1.597 1.69E-14 40s ribosomal protein s23 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 704.185 440.923 y y y ruditapes_c14761 -2.619 1.91E-14 214.557 81.925 y y y ruditapes_lrc34668 9.789 1.95E-14 basic transcription factor 3-like 4 8.157 79.851 y y y ruditapes2_c2730 -4.603 2.17E-14 116.691 25.353 y y y ruditapes_c4286 -3.042 2.36E-14 173.384 57.002 y y y ruditapes2_lrc4224 -32.14 2.57E-14 63.803 1.985 y y y ruditapes2_c372 -3.864 2.64E-14 thioredoxin (allergen cop c 2) 133.85 34.637 y y y ruditapes_c16933 -3.984 2.67E-14 130.18 32.672 y y y ruditapes_c2943 -2.261 2.85E-14 272.175 120.379 y y y ruditapes_c25081 -27.612 2.87E-14 64.568 2.338 y y y ruditapes_c4109 -3.817 2.91E-14 134.934 35.351 y y y ruditapes2_c4635 -5.529 2.92E-14 102.211 18.486 y y y ruditapes_lrc24066 -8.768 2.93E-14 82.265 9.382 y y y ruditapes_c28275 -7.268 3.09E-14 88.555 12.184 y y y ruditapes_c19849 -14.789 3.10E-14 70.956 4.798 y y y ruditapes_c24161 -3.069 3.87E-14 168.593 54.929 y y y ruditapes_c28641 -3.442 4.11E-14 147.695 42.909 y y y ruditapes_lrc33585 -6.007 4.47E-14 96.056 15.991 y y y ruditapes_c3502 -1.89 4.75E-14 ribosomal protein l5 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding /// 0042273 // ribosomal large subunit biogenesis 400.003 211.696 y y y ruditapes_c9571 -7.857 6.39E-14 83.543 10.634 y y y ruditapes_s40362 -35.58 7.13E-14 61.031 1.715 y y y ruditapes_lrc34197 -1.651 8.06E-14 large subunit ribosomal protein 30 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 590.625 357.633 y y y ruditapes_lrc10098 -6.012 8.60E-14 93.841 15.608 y y y ruditapes_c4529 -1.876 9.30E-14 398.16 212.23 y y y ruditapes_c29246 -5.273 9.67E-14 100.96 19.147 y y y ruditapes_c13915 -2.117 1.03E-13 297.317 140.43 y y y ruditapes_lrc17640 -9.387 1.64E-13 75.621 8.056 y y y ruditapes_c12481 -6.28 1.65E-13 89.579 14.265 y y y ruditapes2_c2291 -2.388 1.98E-13 230.103 96.375 y y y ruditapes_c21434 -5.671 2.43E-13 93.428 16.474 y y y ruditapes_c226 1.545 3.17E-13 ribosomal protein s2 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005654 // nucleoplasm /// 0003723 // RNA binding /// 0048604 // fibroblast growth factor 3 binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0048602 // fibroblast growth factor 1 binding 440.947 681.396 y y y ruditapes_s33692 -11.719 3.25E-13 68.979 5.886 y y y ruditapes_c30329 -2.999 3.54E-13 160.321 53.454 y y y ruditapes_c18244 -5.884 3.58E-13 90.195 15.33 y y y ruditapes_c22671 -1.868 3.63E-13 383.128 205.048 y y y ruditapes_c17260 -4.37 4.89E-13 108.671 24.869 y y y ruditapes2_c4603 -2.124 4.92E-13 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 278.805 131.251 y y y ruditapes_c27407 -4.937 5.01E-13 99.271 20.106 y y y ruditapes_c14 -1.873 5.06E-13 ribosomal protein l15 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 376.097 200.83 y y y ruditapes2_c902 -3.133 5.87E-13 149.113 47.596 y y y ruditapes2_c1544 -9.404 6.06E-13 72.003 7.656 y y y ruditapes_c6530 -2.056 6.74E-13 295.874 143.904 y y y ruditapes_c6663 -6.738 8.76E-13 60s ribosomal protein l9 /// 0005622 // intracellular 81.26 12.06 y y y ruditapes_lrc38604 -18.858 9.12E-13 60.002 3.182 y y y ruditapes_c27212 -2.44 9.18E-13 209.303 85.79 y y y ruditapes_c26688 -8.024 9.25E-13 75.1 9.359 y y y ruditapes2_c2289 -2.447 9.40E-13 208.102 85.056 y y y ruditapes_lrc31628 -2.941 9.85E-13 158.17 53.788 y y y ruditapes_c17179 -10.067 1.01E-12 69.072 6.861 y y y ruditapes_c19698 -6.042 1.06E-12 85.308 14.119 y y y ruditapes2_lrc3434 -18.738 1.14E-12 59.554 3.178 y y y ruditapes2_c2514 -3.292 1.16E-12 137.182 41.667 y y y ruditapes_c17598 -3.84 1.17E-12 117.339 30.558 y y y ruditapes_c5697 -2.673 1.19E-12 179.261 67.073 y y y ruditapes2_c3078 -10.849 1.26E-12 66.953 6.172 y y y ruditapes2_lrc5734 2.099 1.27E-12 ribosomal protein s24 /// 0005811 // lipid particle /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 127.138 266.839 y y y ruditapes_lrc33106 -6.512 1.31E-12 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 81.363 12.494 y y y ruditapes_c16990 -3.241 1.36E-12 138.788 42.821 y y y ruditapes_c2512 -4.303 1.36E-12 105.766 24.579 y y y ruditapes2_c782 -3.883 1.38E-12 115.396 29.719 y y y ruditapes2_c198 -3.716 1.87E-12 118.793 31.968 y y y ruditapes_c12024 -2.278 2.05E-12 229.341 100.676 y y y ruditapes2_c1700 -2.251 2.15E-12 234.294 104.103 y y y ruditapes_c3042 -2.819 2.71E-12 160.837 57.061 y y y ruditapes_c11207 -6.542 2.98E-12 78.572 12.011 y y y ruditapes_lrc27610 -2.965 3.15E-12 149.489 50.417 y y y ruditapes_c22091 -6.063 3.20E-12 81.495 13.442 y y y ruditapes_c22230 -3.301 3.37E-12 131.117 39.718 y y y ruditapes_c36518 -3.044 3.57E-12 ribosomal protein l35 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 143.857 47.253 y y y ruditapes_lrc26299 -3.073 3.62E-12 142.128 46.252 y y y ruditapes2_c536 -2.201 3.85E-12 239.184 108.688 y y y ruditapes_lrc33417 -4.177 4.72E-12 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding /// 0007165 // signal transduction 103.109 24.684 y y y ruditapes_c27956 -3.02 4.76E-12 143.592 47.544 y y y ruditapes2_c58 -1.479 4.81E-12 60s ribosomal protein l27a /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 789.396 533.75 y n n ruditapes_c30528 -3.133 5.85E-12 136.132 43.446 y y y ruditapes_c3267 -7.942 6.13E-12 69.926 8.805 y y y ruditapes_lrc32328 -2.105 6.23E-12 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 257.181 122.176 y y y ruditapes2_c1190 -2.255 6.55E-12 elongation factor 1-beta 223.044 98.906 y y y ruditapes_c20431 -5.216 6.87E-12 86.313 16.547 y y y ruditapes2_c1347 -7.85 8.10E-12 69.448 8.847 y y y ruditapes_c24148 -4.853 8.39E-12 89.818 18.507 y y y ruditapes_lrc38307 -6.758 9.31E-12 AF339450_1hillarin [Hirudo medicinalis] 73.784 10.918 y y y ruditapes2_c2493 -2.309 9.68E-12 209.864 90.888 y y y ruditapes2_c1325 -2.816 1.00E-11 152.613 54.193 y y y ruditapes_lrc39142 -3.506 1.11E-11 60s ribosomal protein l7a 117.037 33.385 y y y ruditapes2_c1719 -3.983 1.23E-11 103.185 25.907 y y y ruditapes_c21785 -2.987 1.51E-11 138.751 46.457 y y y ruditapes_lrc38632 -2.633 1.86E-11 nascent polypeptide-associated complex subunit alpha /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0017025 // TATA-binding protein binding 163.828 62.23 y y y ruditapes_c3300 -2.485 1.90E-11 179.269 72.133 y y y ruditapes2_c377 -3.011 2.07E-11 135.432 44.976 y y y ruditapes_c17720 -4.71 2.17E-11 88.096 18.706 y y y ruditapes_c29081 -7.857 2.38E-11 66.28 8.435 y y y ruditapes_s37523 -3.184 2.63E-11 ribosomal protein l27a /// 0022626 // cytosolic ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 125.278 39.346 y y y ruditapes_c10489 -1.724 2.82E-11 406.673 235.947 y y y ruditapes_c3763 -3.694 2.83E-11 106.668 28.877 y y y ruditapes_c15740 -5.744 3.17E-11 76.221 13.269 y y y ruditapes2_c1056 -2.036 3.35E-11 257.702 126.585 y y y ruditapes_lrc15460 1.662 3.39E-11 elongation factor-1 alpha /// 0006414 // translational elongation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005737 // cytoplasm /// 0003746 // translation elongation factor activity 260.259 432.5 y y y ruditapes_c12292 -2.373 3.46E-11 189.02 79.661 y y y ruditapes_lrc9019 -114.851 3.89E-11 44.836 0.39 y y y ruditapes_s37746 -20.317 4.36E-11 50.492 2.485 y y y ruditapes_lrc33090 -3.138 5.12E-11 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 123.702 39.419 y y y ruditapes2_lrc3268 -2.735 5.47E-11 147.609 53.973 y y y ruditapes2_lrc4997 -3.267 5.91E-11 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 117.286 35.898 y y y ruditapes2_c2174 -1.74 6.17E-11 poly a binding cytoplasmic 1 b /// 0031370 // eukaryotic initiation factor 4G binding /// 0008266 // poly(U) RNA binding /// 0007596 // blood coagulation /// 0000166 // nucleotide binding /// 0060212 // negative regulation of nuclear-transcribed mRNA poly(A) tail shortening /// 0005844 // polysome /// 0043621 // protein self-association /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0008143 // poly(A) RNA binding /// 0048255 // mRNA stabilization /// 0017130 // poly(C) RNA binding /// 0006417 // regulation of translation 380.989 218.942 y y y ruditapes2_lrc3839 -2.511 6.34E-11 histone /// 0005811 // lipid particle /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0005700 // polytene chromosome /// 0000786 // nucleosome 167.03 66.512 y y y ruditapes_c13394 -5.17 6.52E-11 78.675 15.217 y y y ruditapes_c20545 -4.925 6.54E-11 81.254 16.498 y y y ruditapes2_c484 -5.248 6.76E-11 77.797 14.823 y y y ruditapes_lrc27061 -3.235 6.89E-11 translation elongation factor ef-2 /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0003746 // translation elongation factor activity 117.767 36.399 y y y ruditapes_c4628 -1.783 8.05E-11 alpha 3d "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 349.409 195.935 y y y ruditapes_c1966 -3.867 8.07E-11 ribosomal protein l19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 97.447 25.2 y y y ruditapes_c6456 -8.144 1.12E-10 60.896 7.478 y y y ruditapes_c22011 -4.503 1.13E-10 84.503 18.767 y y y ruditapes_c30942 -4.534 1.22E-10 83.778 18.478 y y y ruditapes_s35422 -2.862 1.27E-10 133.278 46.572 y y y ruditapes2_lrc4839 -3.716 1.29E-10 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 98.947 26.624 y y y ruditapes_c11191 -2.643 1.33E-10 148.944 56.351 y y y ruditapes_c16040 -13.963 1.49E-10 51.134 3.662 y y y ruditapes_c3092 -5.27 1.61E-10 74.504 14.138 y y y ruditapes_c19429 -2.646 1.72E-10 146.859 55.499 y y y ruditapes_c23949 -33.198 1.74E-10 44.653 1.345 y y y ruditapes_c26042 -2.597 1.75E-10 151.022 58.16 y y y ruditapes_c5084 -3.85 1.83E-10 beta-tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 94.136 24.451 y y y ruditapes_lrc34496 -1.978 1.97E-10 ribosomal protein s11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 253.925 128.348 y y y ruditapes2_c248 -2.588 2.02E-10 150.803 58.271 y y y ruditapes_c408 -1.669 2.05E-10 atp:adp antiporter /// 0005488 // binding /// 0015865 // purine nucleotide transport /// 0005471 // ATP:ADP antiporter activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009536 // plastid 412.21 246.912 y y y ruditapes_c10728 -3.938 2.07E-10 91.684 23.279 y y y ruditapes_c29502 -9.137 2.11E-10 56.635 6.198 y y y ruditapes2_c1269 -22.753 2.21E-10 46.047 2.024 y y y ruditapes_c29089 -1.998 2.23E-10 246.406 123.303 y y y ruditapes_lrc36173 -2.485 2.37E-10 60s ribosomal protein l7 /// 0007275 // multicellular organismal development /// 0040007 // growth /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 159.674 64.25 y y y ruditapes_c6359 -2.309 2.45E-10 181.223 78.476 y y y ruditapes2_c3709 -3.389 3.13E-10 glutathione peroxidase 3 /// 0006749 // glutathione metabolic process /// 0005625 // soluble fraction /// 0005615 // extracellular space /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0008134 // transcription factor binding /// 0006982 // response to lipid hydroperoxide /// 0004602 // glutathione peroxidase activity /// 0051289 // protein homotetramerization /// 0043295 // glutathione binding 104.094 30.718 y y y ruditapes_c16472 -6.213 3.81E-10 64.943 10.452 y y y ruditapes_c16275 -9.706 4.17E-10 pol-like protein 53.66 5.528 y y y ruditapes_c1528 -2.496 5.22E-10 heat shock protein 90 /// 0005515 // protein binding /// 0009987 // cellular process /// 0005622 // intracellular 152.389 61.044 y y y ruditapes_c17397 -7.453 6.42E-10 57.994 7.782 y y y ruditapes2_c1143 -1.904 6.46E-10 263.484 138.395 y y y ruditapes_c20412 -4.098 7.02E-10 83.33 20.333 y y y ruditapes2_c2958 -2.293 7.09E-10 174.124 75.937 y y y ruditapes_c4771 -3.993 8.05E-10 84.628 21.196 y y y ruditapes_lrc36587 -9.704 8.06E-10 51.897 5.348 y y y ruditapes_c12733 -2.732 8.10E-10 129.753 47.498 y y y ruditapes_c20730 -3.803 8.49E-10 88.196 23.193 y y y ruditapes2_lrc3718 -1.563 8.68E-10 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding 489.027 312.824 y y y ruditapes_c10822 -2.981 8.94E-10 114.702 38.479 y y y ruditapes2_c65 -1.971 9.01E-10 237.579 120.567 y y y ruditapes_lrc35569 -8.032 9.10E-10 atp synthase beta "/// 0005524 // ATP binding /// 0005811 // lipid particle /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 55.214 6.874 y y y ruditapes_c9496 -1.846 9.36E-10 280.524 151.929 y y y ruditapes2_c2245 -3.96 9.76E-10 84.387 21.308 y y y ruditapes_c1740 1.308 9.89E-10 863.885 "1,130.05" y n n ruditapes_c21741 -4.015 1.12E-09 82.766 20.615 y y y ruditapes_c5549 -2.626 1.15E-09 135.036 51.421 y y y ruditapes_s33494 -7.495 1.18E-09 56.063 7.48 y y y ruditapes2_c2680 -42.594 1.25E-09 39.624 0.93 y y y ruditapes_c8441 -2.819 1.32E-09 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 121.006 42.925 y y y ruditapes2_c1486 -3.106 1.38E-09 106.551 34.3 y y y ruditapes_c2011 -4.167 1.38E-09 79.324 19.035 y y y ruditapes2_lrc3447 -1.991 1.38E-09 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 226.721 113.9 y y y ruditapes_c5085 -3.331 1.41E-09 98.215 29.486 y y y ruditapes2_c1373 -2.609 1.46E-09 134.724 51.643 y y y ruditapes_lrc39292 -2.638 1.66E-09 131.534 49.857 y y y ruditapes_c22004 -3.133 1.75E-09 104.147 33.245 y y y ruditapes2_c3409 -2.748 1.77E-09 protein 123.494 44.947 y y y ruditapes2_c3740 -1.842 1.82E-09 272.554 147.953 y y y ruditapes2_c1076 -3.357 1.87E-09 95.896 28.564 y y y ruditapes_c30205 -3.799 1.92E-09 84.541 22.253 y y y ruditapes_c16238 -8.339 1.92E-09 52.296 6.271 y y y ruditapes_c2411 -3.922 1.94E-09 82.07 20.925 y y y ruditapes2_lrc5371 -2.559 1.95E-09 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 136.654 53.396 y y y ruditapes2_lrc5093 -3.485 1.98E-09 91.899 26.373 y y y ruditapes_c31661 -12.736 2.17E-09 45.586 3.579 y y y ruditapes_c3627 -3.901 2.33E-09 81.655 20.933 y y y ruditapes_c18853 -101.849 2.53E-09 36.593 0.359 y y y ruditapes_lrc33965 -2.013 2.58E-09 213.379 105.981 y y y ruditapes_c11889 -2.6 2.67E-09 131.055 50.406 y y y ruditapes2_c1624 -2.408 2.78E-09 148.296 61.596 y y y ruditapes_c9518 -3.482 2.78E-09 90.27 25.926 y y y ruditapes_lrc14347 -3.928 2.90E-09 80.194 20.418 y y y ruditapes2_c329 -3.301 3.24E-09 94.789 28.713 y y y ruditapes_c12242 -2.57 3.39E-09 131.704 51.246 y y y ruditapes_c5209 -3.175 3.64E-09 98.468 31.014 y y y ruditapes_lrc33697 -3.463 3.78E-09 89.244 25.767 y y y ruditapes_c29608 -2.767 3.84E-09 117.143 42.33 y y y ruditapes_c14949 -4.804 3.94E-09 67.168 13.982 y y y ruditapes_lrc38283 -2.155 3.99E-09 179.419 83.273 y y y ruditapes2_c583 -2.862 3.99E-09 111.574 38.979 y y y ruditapes_lrc38328 -53.884 4.62E-09 36.332 0.674 y y y ruditapes_lrc28357 -7.328 4.76E-09 52.448 7.157 y y y ruditapes_c5242 -4.148 4.85E-09 74.309 17.913 y y y ruditapes2_c6215 -1.427 4.92E-09 ribosomal protein l5 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding /// 0042273 // ribosomal large subunit biogenesis 674.438 472.589 y n n ruditapes_c4750 -2.691 4.95E-09 120.211 44.667 y y y ruditapes_c6926 1.063 4.96E-09 atp synthase subunit 6 "/// 0015986 // ATP synthesis coupled proton transport /// 0016021 // integral to membrane /// 0015078 // hydrogen ion transmembrane transporter activity /// 0005743 // mitochondrial inner membrane /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" "14,067.04" "14,960.07" y n n ruditapes_c32048 -7.936 5.21E-09 50.456 6.358 y y y ruditapes2_c792 -4.405 5.30E-09 70.433 15.99 y y y ruditapes2_c2858 -3.178 5.37E-09 96.217 30.276 y y y ruditapes2_c1368 -1.986 5.44E-09 211.297 106.375 y y y ruditapes_c3095 -5.537 5.62E-09 SclB protein [Capnocytophaga gingivalis ATCC 33624] 60.022 10.84 y y y ruditapes_lrc38246 -4.595 5.78E-09 67.867 14.769 y y y ruditapes2_c2079 -2.763 5.81E-09 eukaryotic translation initiation factor subunit 5 47kda /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol 114.685 41.508 y y y ruditapes_c20796 -2.609 5.98E-09 124.575 47.744 y y y ruditapes2_lrc3767 -2.596 6.14E-09 protein /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 125.349 48.282 y y y ruditapes_c11288 -4.062 6.14E-09 74.628 18.372 y y y ruditapes_c2078 -2.609 6.19E-09 124.322 47.645 y y y ruditapes_c4530 -36.013 6.48E-09 36.653 1.018 y y y ruditapes2_c1043 -1.595 7.79E-09 ribosomal protein s6 /// 0048471 // perinuclear region of cytoplasm /// 0043066 // negative regulation of apoptosis /// 0006414 // translational elongation /// 0001890 // placenta development /// 0005730 // nucleolus /// 0043065 // positive regulation of apoptosis /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0031575 // G1/S transition checkpoint /// 0031929 // TOR signaling pathway /// 0006924 // activation-induced cell death of T cells /// 0005844 // polysome /// 0006364 // rRNA processing /// 0000082 // G1/S transition of mitotic cell cycle /// 0002309 // T cell proliferation during immune response /// 0042593 // glucose homeostasis /// 0022605 // oogenesis stage /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033077 // T cell differentiation in the thymus /// 0007067 // mitosis /// 0007369 // gastrulation /// 0048821 // erythrocyte development 400.912 251.389 y y y ruditapes2_c1761 -4.122 7.94E-09 72.618 17.618 y y y ruditapes_c18798 -3.928 9.18E-09 75.075 19.112 y y y ruditapes2_lrc4200 -137.318 9.34E-09 33.71 0.245 y y y ruditapes2_c4288 -1.882 1.01E-08 large subunit ribosomal protein 30 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 233.43 124.028 y y y ruditapes_c29425 -3.832 1.02E-08 76.312 19.916 y y y ruditapes_c12248 -4.567 1.05E-08 65.856 14.419 y y y ruditapes_c6740 -3.17 1.05E-08 92.814 29.282 y y y ruditapes2_c10 4.743 1.05E-08 ribosomal protein s24 /// 0005840 // ribosome 13.342 63.278 y y y ruditapes_c4478 -3.762 1.06E-08 77.455 20.591 y y y ruditapes_lrc18914 -4.171 1.09E-08 70.579 16.922 y y y ruditapes_c20310 -2.891 1.09E-08 103.895 35.942 y y y ruditapes_c29994 -4.892 1.11E-08 62.454 12.766 y y y ruditapes_c26630 -11.767 1.13E-08 42.352 3.599 y y y ruditapes_c18926 -2.387 1.17E-08 138.683 58.106 y y y ruditapes2_c1430 -2.623 1.17E-08 118.814 45.294 y y y ruditapes_c3967 -3.176 1.20E-08 91.864 28.923 y y y ruditapes_lrc17737 -1.761 1.24E-08 ribosomal protein l39 /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 278.675 158.276 y y y ruditapes_lrc24298 -4.929 1.26E-08 large subunit ribosomal protein 27a /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 61.666 12.51 y y y ruditapes_c25142 -3.718 1.32E-08 77.308 20.795 y y y ruditapes2_lrc4135 -8.098 1.33E-08 47.377 5.85 y y y ruditapes_c28421 -7.046 1.37E-08 50.189 7.123 y y y ruditapes2_c399 -2.819 1.40E-08 nicotinamide nucleotide transhydrogenase /// 0055114 // oxidation reduction /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity /// 0015992 // proton transport /// 0006099 // tricarboxylic acid cycle /// 0005746 // mitochondrial respiratory chain /// 0051287 // NAD or NADH binding /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity /// 0016021 // integral to membrane /// 0050661 // NADP or NADPH binding /// 0009055 // electron carrier activity 105.864 37.552 y y y ruditapes_c9087 -3.593 1.44E-08 79.496 22.123 y y y ruditapes_c15990 -6.375 1.45E-08 52.49 8.234 y y y ruditapes_c21729 -4.656 1.51E-08 63.508 13.64 y y y ruditapes_c4380 -4.351 1.58E-08 66.678 15.325 y y y ruditapes2_c4234 -4.606 1.63E-08 63.735 13.839 y y y ruditapes_c11658 -2.322 1.64E-08 142.725 61.469 y y y ruditapes_c13782 -2.712 1.65E-08 110.732 40.831 y y y ruditapes2_c268 -2.576 1.66E-08 calponin transgelin /// 0003779 // actin binding /// 0031032 // actomyosin structure organization 119.661 46.459 y y y ruditapes_lrc21865 -4.867 1.77E-08 60.955 12.525 y y y ruditapes_c4608 -7.697 1.79E-08 47.5 6.171 y y y ruditapes_c7960 -3.571 1.83E-08 78.851 22.08 y y y ruditapes_lrc33116 -9.937 1.88E-08 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 43.144 4.342 y y y ruditapes_lrc32539 -4.017 1.93E-08 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 70.392 17.524 y y y ruditapes_c2399 -4.265 1.93E-08 66.925 15.69 y y y ruditapes_c4721 -5.052 1.97E-08 59.033 11.684 y y y ruditapes_lrc33693 -2.707 1.98E-08 109.803 40.561 y y y ruditapes_lrc33733 -2.265 2.00E-08 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 147.665 65.181 y y y ruditapes2_lrc4212 -2.151 2.04E-08 40s ribosomal protein s17 /// 0005622 // intracellular 163.505 76.007 y y y ruditapes2_lrc4862 -4.835 2.11E-08 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 60.573 12.529 y y y ruditapes2_c3356 -4.606 2.19E-08 protein /// 0005515 // protein binding 62.583 13.588 y y y ruditapes_c439 -2.404 2.20E-08 131.747 54.802 y y y ruditapes_c3138 -5.879 2.36E-08 53.208 9.051 y y y ruditapes_c26252 -2.816 2.45E-08 102.455 36.38 y y y ruditapes_c13771 -10.08 2.45E-08 crumbs homolog 1 isoform ii precursor 42.247 4.191 y y y ruditapes_lrc38206 -4.09 2.53E-08 68.164 16.667 y y y ruditapes_lrc38271 -4.734 2.54E-08 cg15828 cg15828- partial 60.779 12.84 y y y ruditapes_c12141 -3.296 2.54E-08 84.116 25.524 y y y ruditapes_c10483 -7.53 2.78E-08 46.649 6.195 y y y ruditapes_c2361 -6.951 2.95E-08 hypothetical protein [Eristalis tenax] 48.163 6.929 y y y ruditapes_c15320 -2.524 3.03E-08 119.063 47.181 y y y ruditapes_c5452 -8.025 3.14E-08 45.086 5.618 y y y ruditapes2_c2665 -5.995 3.16E-08 51.69 8.623 y y y ruditapes_c13059 -4.448 3.16E-08 62.797 14.12 y y y ruditapes_c23138 -5.871 3.16E-08 52.282 8.904 y y y ruditapes_c13222 -2.602 3.18E-08 113.114 43.472 y y y ruditapes_lrc34753 -1.583 3.19E-08 ribosomal protein s15 /// 0005840 // ribosome 378.73 239.26 y y y ruditapes_c26006 -3.098 3.24E-08 88.989 28.723 y y y ruditapes_c3052 -1.902 3.25E-08 211.316 111.085 y y y ruditapes_c16365 -4.142 3.31E-08 66.294 16.006 y y y ruditapes2_lrc5253 -1.705 3.34E-08 ribosomal protein l13 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 289.957 170.065 y y y ruditapes_c7003 -3.165 3.39E-08 86.522 27.337 y y y ruditapes_c956 -2.47 3.44E-08 122.315 49.516 y y y ruditapes_c20747 -7.689 3.47E-08 45.594 5.93 y y y ruditapes_c1219 -2.151 3.47E-08 158.242 73.582 y y y ruditapes_c4463 -2.535 3.77E-08 116.573 45.989 y y y ruditapes_c14715 -3.337 3.83E-08 80.831 24.22 y y y ruditapes_c12585 -10.536 3.85E-08 40.499 3.844 y y y ruditapes_lrc31300 -2.651 3.87E-08 108.541 40.937 y y y ruditapes2_c2581 -4.198 3.92E-08 64.849 15.446 y y y ruditapes_c2120 -3.877 3.94E-08 69.467 17.919 y y y ruditapes_c9842 -2.266 4.12E-08 141.009 62.225 y y y ruditapes_c3381 -5.49 4.35E-08 53.269 9.703 y y y ruditapes_c7132 -6.761 4.48E-08 47.512 7.028 y y y ruditapes2_lrc5444 -1.939 4.51E-08 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 197.06 101.628 y y y ruditapes2_c1812 -4.541 4.56E-08 60.372 13.294 y y y ruditapes2_c4353 -3.025 4.61E-08 tubulin polymerization-promoting protein family member 2 /// 0002119 // nematode larval development /// 0005730 // nucleolus /// 0000003 // reproduction /// 0005737 // cytoplasm 89.599 29.619 y y y ruditapes2_lrc5065 -4.325 4.67E-08 62.594 14.474 y y y ruditapes2_c514 -3.187 4.85E-08 83.862 26.314 y y y ruditapes2_c3414 -2.774 5.07E-08 99.87 35.999 y y y ruditapes_s39701 -4.448 5.35E-08 eukaryotic translation initiation factor 60.697 13.647 y y y ruditapes2_lrc4923 -1.667 5.47E-08 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0042273 // ribosomal large subunit biogenesis 302.89 181.707 y y y ruditapes_c5648 -1.377 5.61E-08 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 709.006 515.001 y n n ruditapes2_c5480 -2.114 6.11E-08 ribosomal protein l26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 158.176 74.825 y y y ruditapes_c27623 -2.246 6.14E-08 139.739 62.21 y y y ruditapes_c28257 -8.141 6.16E-08 42.921 5.272 y y y ruditapes2_c939 -2.775 6.22E-08 98.504 35.497 y y y ruditapes2_lrc4119 -1.8 6.46E-08 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 235.2 130.671 y y y ruditapes_c21174 -7.036 6.89E-08 45.33 6.442 y y y ruditapes_lrc36917 -4.959 7.25E-08 54.986 11.089 y y y ruditapes_c2139 -3.666 7.37E-08 70.264 19.165 y y y ruditapes2_c3057 -2.224 7.56E-08 140.554 63.205 y y y ruditapes_c14499 -3.749 7.72E-08 68.566 18.291 y y y ruditapes2_lrc3296 -2.303 8.08E-08 ribosomal protein s13 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 130.861 56.823 y y y ruditapes_c16323 -9.903 8.10E-08 39.316 3.97 y y y ruditapes_c2437 -3.043 8.42E-08 85.467 28.086 y y y ruditapes_c3233 -2.919 8.73E-08 89.881 30.787 y y y ruditapes_c19400 -4.087 8.74E-08 62.914 15.393 y y y ruditapes2_c1239 -5.454 8.84E-08 51.034 9.358 y y y ruditapes2_c3070 -2.636 9.19E-08 103.409 39.225 y y y ruditapes_lrc15978 -5.602 9.67E-08 49.914 8.91 y y y ruditapes_lrc12230 -2.21 9.88E-08 139.677 63.188 y y y ruditapes_c22426 -5.733 1.00E-07 49.124 8.569 y y y ruditapes2_lrc5315 -20.649 1.02E-07 ribosomal protein l32 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 32.862 1.591 y y y ruditapes2_c16 -5.068 1.04E-07 cg8844 /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0016020 // membrane /// 0016491 // oxidoreductase activity 52.876 10.434 y y y ruditapes_c12743 -5.618 1.07E-07 49.496 8.81 y y y ruditapes2_lrc3107 -1.776 1.09E-07 236.191 132.993 y y y ruditapes_lrc33482 -2.437 1.10E-07 115.902 47.557 y y y ruditapes_lrc22007 -7.101 1.11E-07 43.718 6.157 y y y ruditapes_lrc31629 -2.149 1.13E-07 146.542 68.189 y y y ruditapes2_c1084 -3.678 1.13E-07 68.031 18.495 y y y ruditapes_c25251 -2.363 1.16E-07 121.804 51.543 y y y ruditapes_lrc33622 -3.862 1.17E-07 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 64.849 16.793 y y y ruditapes_c18213 -6.671 1.18E-07 44.835 6.721 y y y ruditapes_c14038 -5.602 1.18E-07 49.234 8.789 y y y ruditapes_c28723 -12.915 1.21E-07 35.527 2.751 y y y ruditapes_c1572 -2.963 1.27E-07 85.94 29.001 y y y ruditapes2_lrc3101 1.802 1.27E-07 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0005080 // protein kinase C binding /// 0007205 // activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding /// 0016301 // kinase activity /// 0004872 // receptor activity 119.08 214.529 y y y ruditapes_c23808 -5.738 1.27E-07 48.298 8.417 y y y ruditapes_c4435 -3.478 1.32E-07 71.202 20.471 y y y ruditapes_c1737 -2.646 1.33E-07 100.279 37.904 y y y ruditapes_c29041 -3.498 1.36E-07 70.646 20.196 y y y ruditapes2_c4994 -1.736 1.36E-07 ribosomal protein l26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 249.521 143.767 y y y ruditapes_c17371 -6.313 1.41E-07 45.518 7.211 y y y ruditapes_lrc38273 -1.642 1.50E-07 ribosomal protein l32 298.055 181.503 y y y ruditapes_c20650 -2.944 1.52E-07 85.586 29.069 y y y ruditapes_c8844 -2.303 1.52E-07 125.331 54.429 y y y ruditapes2_lrc3639 -2.557 1.58E-07 104.442 40.845 y y y ruditapes_lrc32635 -3.355 1.71E-07 ribosomal protein l4 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005515 // protein binding /// 0005829 // cytosol 72.648 21.652 y y y ruditapes2_c3306 -2.226 1.76E-07 calponin-like protein 132.341 59.451 y y y ruditapes_c2782 -3.328 1.78E-07 73.099 21.962 y y y ruditapes_c13201 -2.151 1.83E-07 141.484 65.785 y y y ruditapes2_c2717 -2.514 1.93E-07 105.838 42.104 y y y ruditapes_c28758 -3.314 2.07E-07 72.654 21.926 y y y ruditapes_c21331 -4.059 2.07E-07 59.591 14.681 y y y ruditapes_c5720 -5.289 2.10E-07 48.978 9.261 y y y ruditapes_c13450 -2.976 2.12E-07 82.416 27.695 y y y ruditapes_c4267 -2.246 2.15E-07 128.165 57.058 y y y ruditapes2_c700 -3.726 2.19E-07 64.142 17.214 y y y ruditapes2_c1086 -3.615 2.22E-07 66.009 18.262 y y y ruditapes_c3255 -3.561 2.23E-07 66.989 18.814 y y y ruditapes_c3670 -2.325 2.27E-07 119.692 51.486 y y y ruditapes_c14377 -3.532 2.31E-07 67.356 19.069 y y y ruditapes_c12397 -2.58 2.39E-07 99.95 38.736 y y y ruditapes2_c601 -1.65 2.46E-07 282.629 171.248 y y y ruditapes_c24004 -3.182 2.53E-07 74.999 23.573 y y y ruditapes_c23699 -3.398 2.63E-07 69.49 20.452 y y y ruditapes_c16601 -2.691 2.71E-07 92.967 34.551 y y y ruditapes_c28270 -13.869 2.71E-07 32.991 2.379 y y y ruditapes_c31780 -3.355 2.77E-07 70.173 20.915 y y y ruditapes2_lrc5221 -4.28 2.91E-07 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 55.644 13.002 y y y ruditapes_c28332 -2.717 2.93E-07 91.127 33.542 y y y ruditapes_c4652 -6.031 2.97E-07 44.215 7.331 y y y ruditapes2_c4393 -4.085 3.04E-07 57.648 14.112 y y y ruditapes2_lrc3199 -1.94 3.09E-07 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 172.402 88.883 y y y ruditapes_c25706 -7.608 3.11E-07 39.412 5.181 y y y ruditapes2_lrc3928 -15.224 3.23E-07 31.929 2.097 y y y ruditapes2_c2845 -3.722 3.30E-07 62.331 16.749 y y y ruditapes_c28606 -3.584 3.44E-07 64.469 17.989 y y y ruditapes2_c3053 -2.926 3.58E-07 81.081 27.712 y y y ruditapes_c490 -2.847 3.64E-07 84.008 29.512 y y y ruditapes_c15663 -8.096 3.68E-07 pol-like protein 37.943 4.687 y y y ruditapes_c7156 -4.751 3.75E-07 50.437 10.617 y y y ruditapes_c22931 -3.896 3.86E-07 59.044 15.156 y y y ruditapes2_lrc5603 -1.6 3.91E-07 ribosomal protein l32 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 306.12 191.375 y y y ruditapes_c19534 -3.492 3.92E-07 65.555 18.775 y y y ruditapes_c7805 -2.315 3.95E-07 115.771 50.003 y y y ruditapes_c1259 -2.862 4.11E-07 82.646 28.879 y y y ruditapes2_c3119 -1.733 4.13E-07 myosin alkali light chain 1 /// 0005509 // calcium ion binding 231.405 133.547 y y y ruditapes_c4486 -8.531 4.26E-07 36.78 4.311 y y y ruditapes_c10090 -4.632 4.32E-07 50.827 10.972 y y y ruditapes_c29941 -12.848 4.51E-07 32.339 2.517 y y y ruditapes_c11959 -4.759 4.68E-07 49.54 10.409 y y y ruditapes_lrc21823 -2.018 4.76E-07 151.674 75.153 y y y ruditapes_c22052 -4.052 4.82E-07 56.079 13.841 y y y ruditapes_c2117 -8.566 4.84E-07 36.369 4.246 y y y ruditapes_lrc35676 -2.079 4.97E-07 beta 2c /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 141.367 68.002 y y y ruditapes2_c3526 -2.588 5.01E-07 protein 94.192 36.401 y y y ruditapes2_c3017 -3.498 5.10E-07 64.152 18.341 y y y ruditapes_c2257 -2.019 5.46E-07 cytochrome c oxidase subunit ii /// 0006810 // transport /// 0005507 // copper ion binding /// 0004129 // cytochrome-c oxidase activity /// 0020037 // heme binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity /// 0022904 // respiratory electron transport chain 149.97 74.284 y y y ruditapes_c4549 -2.722 5.47E-07 86.71 31.852 y y y ruditapes2_c1103 -1.99 5.54E-07 154.974 77.877 y y y ruditapes_c14505 -3.625 5.61E-07 61.427 16.947 y y y ruditapes_c29559 -4.588 5.62E-07 50.176 10.936 y y y ruditapes_c16743 -9.736 5.93E-07 34.248 3.518 y y y ruditapes2_lrc5326 -2.864 6.09E-07 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 80.131 27.982 y y y ruditapes_c11595 -3.83 6.23E-07 57.816 15.095 y y y ruditapes_c7098 -2.027 6.44E-07 146.63 72.322 y y y ruditapes2_c1429 -4.56 6.51E-07 49.833 10.929 y y y ruditapes_c5130 -5.408 6.77E-07 44.244 8.181 y y y ruditapes2_c1500 -2.501 7.13E-07 96.8 38.712 y y y ruditapes_c2817 -3.366 7.24E-07 65.029 19.322 y y y ruditapes_lrc28272 -3.154 7.32E-07 69.933 22.173 y y y ruditapes_c10312 -1.748 7.44E-07 215.244 123.138 y y y ruditapes2_c1503 -2.532 7.51E-07 94.485 37.32 y y y ruditapes_c24998 -3.762 7.62E-07 arylsulfatase [Haliotis discus discus] 57.871 15.384 y y y ruditapes2_lrc5054 -3.482 7.88E-07 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 62.305 17.893 y y y ruditapes_lrc34372 -1.656 7.98E-07 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 255.622 154.381 y y y ruditapes2_c743 -6.236 8.26E-07 40.17 6.442 y y y ruditapes_c3958 -2.291 8.79E-07 111.027 48.473 y y y ruditapes_c20313 -2.193 8.90E-07 120.671 55.018 y y y ruditapes_lrc35596 2.621 9.04E-07 32.833 86.066 y y y ruditapes_c17153 -3.531 9.59E-07 60.462 17.122 y y y ruditapes_c28118 -3.14 9.66E-07 68.772 21.903 y y y ruditapes2_c368 -3.577 9.77E-07 cyclophilin-type peptidyl-prolyl cis-trans isomerase /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 59.584 16.656 y y y ruditapes_c31304 -3.644 9.93E-07 58.425 16.033 y y y ruditapes_lrc34306 11.223 1.01E-06 2.79 31.315 y y y ruditapes_c3730 -3.068 1.02E-06 70.391 22.943 y y y ruditapes_c3510 -2.411 1.06E-06 99.711 41.353 y y y ruditapes2_c1522 -3.53 1.17E-06 59.511 16.86 y y y ruditapes_lrc19191 -2.349 1.24E-06 103.104 43.888 y y y ruditapes_lrc17652 -4.198 1.26E-06 50.454 12.017 y y y ruditapes_c20415 -5.535 1.26E-06 41.51 7.5 y y y ruditapes2_c2188 -3.871 1.29E-06 leydig cell tumor 10 kda protein homolog 54.013 13.955 y y y ruditapes2_lrc4265 2.143 1.31E-06 55.389 118.726 y y y ruditapes2_c2352 -1.726 1.36E-06 213.349 123.607 y y y ruditapes_c19918 -3.701 1.36E-06 56.103 15.157 y y y ruditapes_c617 -1.849 1.40E-06 173.666 93.91 y y y ruditapes2_c1713 -6.051 1.42E-06 loc794406 protein /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 39.075 6.458 y y y ruditapes_c16851 -2.651 1.42E-06 83.569 31.524 y y y ruditapes_c29465 -2.265 1.43E-06 109.032 48.141 y y y ruditapes_c15983 -3.52 1.44E-06 58.691 16.674 y y y ruditapes_c31173 -2.692 1.44E-06 81.576 30.302 y y y ruditapes_lrc35247 -10.437 1.46E-06 31.176 2.987 y y y ruditapes_c18293 -3.435 1.47E-06 60.083 17.492 y y y ruditapes_c10121 -2.675 1.53E-06 81.941 30.632 y y y ruditapes_s39096 -1.685 1.73E-06 40s ribosomal protein s3 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 226.341 134.364 y y y ruditapes_c773 -2.592 1.78E-06 84.897 32.757 y y y ruditapes2_c92 -2.401 1.78E-06 ribosomal protein s16 /// 0005811 // lipid particle /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0000022 // mitotic spindle elongation /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 96.258 40.091 y y y ruditapes_lrc34991 -1.931 1.84E-06 guanine nucleotide-binding protein subunit beta-2-like 1 /// 0019903 // protein phosphatase binding /// 0043025 // cell soma /// 0005737 // cytoplasm 151.551 78.498 y y y ruditapes_lrc38059 -3.903 1.84E-06 atp h+ mitochondrial f1 gamma polypeptide 1 /// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0016787 // hydrolase activity /// 0006754 // ATP biosynthetic process 52.047 13.335 y y y ruditapes_c23198 -6.42 1.86E-06 37.02 5.767 y y y ruditapes_c19045 1.916 1.90E-06 actin /// 0005488 // binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0030863 // cortical cytoskeleton 77.372 148.23 y y y ruditapes_c13214 -4.592 1.95E-06 45.356 9.878 y y y ruditapes_lrc33393 -2.164 1.96E-06 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 116.297 53.753 y y y ruditapes_c10900 -3.453 2.00E-06 58.239 16.868 y y y ruditapes2_c1027 -2.709 2.03E-06 78.576 29.011 y y y ruditapes_c14245 -11.754 2.05E-06 29.3 2.493 y y y ruditapes_lrc33602 -2.382 2.07E-06 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 96.334 40.437 y y y ruditapes2_c1113 -2.638 2.07E-06 81.583 30.932 y y y ruditapes_c24023 -6.044 2.07E-06 37.874 6.266 y y y ruditapes2_c5587 -1.609 2.10E-06 60s ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0000166 // nucleotide binding /// 0003735 // structural constituent of ribosome 261.772 162.692 y y y ruditapes_c1451 -2.858 2.15E-06 72.503 25.367 y y y ruditapes_c22145 -3.904 2.16E-06 51.351 13.154 y y y ruditapes2_c3305 -2.556 2.16E-06 protein 85.304 33.368 y y y ruditapes_lrc16378 4.713 2.18E-06 ubiquitin family protein /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005654 // nucleoplasm /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0045941 // positive regulation of transcription 9.239 43.546 y y y ruditapes_c31764 -7.057 2.23E-06 34.838 4.937 y y y ruditapes_c12054 -2.337 2.30E-06 98.812 42.283 y y y ruditapes2_c2050 -3.647 2.31E-06 54.409 14.918 y y y ruditapes_c15263 -1.569 2.44E-06 elongation factor-2 284.604 181.363 y y y ruditapes_lrc19277 -2.65 2.51E-06 79.683 30.071 y y y ruditapes2_c2791 -3.961 2.53E-06 hypothetical protein Kpol_464p3 [Vanderwaltozyma polyspora DSM 70294] 49.992 12.622 y y y ruditapes2_c2590 -3.669 2.56E-06 53.631 14.618 y y y ruditapes2_c1348 -3.152 2.58E-06 63.073 20.012 y y y ruditapes_c29207 -2.912 2.67E-06 69.387 23.824 y y y ruditapes_c10783 -2.105 2.73E-06 119.781 56.914 y y y ruditapes_c28098 -2.993 2.81E-06 66.692 22.281 y y y ruditapes_c5900 -6.966 2.97E-06 34.179 4.907 y y y ruditapes_c27102 -3.468 2.99E-06 56.004 16.151 y y y ruditapes2_c1329 -1.846 3.16E-06 162.701 88.125 y y y ruditapes2_c200 -3.023 3.17E-06 ribosomal l24 domain containing 1 /// 0042254 // ribosome biogenesis /// 0005634 // nucleus /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 65.167 21.557 y y y ruditapes_lrc35910 -1.456 3.25E-06 ribosomal protein s3a /// 0044424 // intracellular part 386.321 265.38 y n n ruditapes2_lrc4878 -1.592 3.25E-06 40s ribosomal protein s14 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 262.178 164.653 y y y ruditapes_c11097 -2.884 3.26E-06 69.09 23.957 y y y ruditapes_c17503 -2.66 3.34E-06 77.273 29.053 y y y ruditapes_c11114 -3.416 3.35E-06 56.322 16.488 y y y ruditapes_c21189 -3.137 3.37E-06 61.951 19.746 y y y ruditapes_c11739 -3.569 3.44E-06 53.691 15.043 y y y ruditapes_c9934 -2.806 3.50E-06 71.254 25.394 y y y ruditapes2_lrc5332 -21.33 3.51E-06 atp h+ mitochondrial f0 subunit c (subunit 9) "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 24.827 1.164 y y y ruditapes_c31905 -5.416 3.54E-06 38.507 7.109 y y y ruditapes_c2537 -3.344 3.61E-06 57.25 17.122 y y y ruditapes_c7529 -6.559 3.63E-06 histone 1 /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 34.558 5.268 y y y ruditapes2_c1264 -2.232 3.72E-06 103.319 46.299 y y y ruditapes2_c837 -3.233 3.75E-06 59.24 18.321 y y y ruditapes2_c678 -3.085 3.88E-06 62.423 20.232 y y y ruditapes_lrc35961 -5.628 3.90E-06 ribosomal protein l7a /// 0042254 // ribosome biogenesis /// 0005840 // ribosome 37.307 6.628 y y y ruditapes2_c1711 -2.495 3.93E-06 84.197 33.752 y y y ruditapes_lrc35365 -1.533 4.02E-06 60s ribosomal protein l9 299.573 195.407 y y y ruditapes_c8212 -4.957 4.07E-06 40.268 8.124 y y y ruditapes2_c779 -2.167 4.21E-06 108.366 50.007 y y y ruditapes_lrc32858 -4.912 4.29E-06 40.326 8.209 y y y ruditapes_c10759 -4.147 4.42E-06 45.739 11.03 y y y ruditapes_c25520 -3.725 4.55E-06 50.203 13.476 y y y ruditapes2_c350 -3.508 4.64E-06 53.198 15.166 y y y ruditapes_lrc32677 -1.505 4.65E-06 ribosomal protein s11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 320.553 213.034 y y y ruditapes_c4536 -3.409 4.70E-06 54.746 16.059 y y y ruditapes_c27717 -4.216 4.77E-06 44.8 10.626 y y y ruditapes_c7451 -2.426 4.79E-06 86.684 35.736 y y y ruditapes_c28189 -5.733 4.79E-06 36.22 6.317 y y y ruditapes2_c32 -2.46 4.80E-06 atp synthase d chain /// 0005811 // lipid particle 84.648 34.414 y y y ruditapes_c9843 -5.05 4.80E-06 39.175 7.757 y y y ruditapes_c3965 -1.856 4.90E-06 154.093 83.011 y y y ruditapes_c19141 -9.798 4.91E-06 28.611 2.92 y y y ruditapes2_c1662 -5.148 4.93E-06 38.594 7.497 y y y ruditapes_c9374 -5.088 4.98E-06 38.854 7.636 y y y ruditapes_c20787 -4.406 5.06E-06 43.018 9.763 y y y ruditapes_c7337 -3.166 5.17E-06 58.955 18.621 y y y ruditapes_c27684 -2.95 5.24E-06 64.247 21.779 y y y ruditapes2_c799 -1.938 5.30E-06 136.641 70.49 y y y ruditapes_c19704 -5.455 5.33E-06 36.939 6.771 y y y ruditapes2_c3295 -2.392 5.46E-06 cytochrome c oxidase subunit iv 87.729 36.671 y y y ruditapes_c5257 -3.193 5.53E-06 58.007 18.165 y y y ruditapes_lrc35225 -4.337 5.54E-06 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 43.186 9.957 y y y ruditapes_c23255 -3.366 5.56E-06 54.662 16.242 y y y ruditapes2_c90 -2.036 5.58E-06 120.911 59.389 y y y ruditapes2_c933 -3.893 5.73E-06 47.18 12.119 y y y ruditapes_lrc35753 -2.478 5.75E-06 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 82.223 33.182 y y y ruditapes_c3544 -2.186 5.83E-06 103.366 47.293 y y y ruditapes_lrc28453 4.007 6.24E-06 ferritin /// 0005488 // binding 11.223 44.97 y y y ruditapes_c9957 -2.991 6.27E-06 62.082 20.758 y y y ruditapes_c25215 -6.016 6.43E-06 34.305 5.702 y y y ruditapes_s39380 -2.584 6.49E-06 75.995 29.409 y y y ruditapes_c13501 -3.45 6.53E-06 52.443 15.203 y y y ruditapes_c14093 -3.564 6.75E-06 50.548 14.182 y y y ruditapes_lrc33408 -3.063 6.89E-06 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 59.729 19.502 y y y ruditapes_c6805 -25.472 6.89E-06 22.793 0.895 y y y ruditapes_c7967 -2.331 6.90E-06 89.866 38.546 y y y ruditapes_c6392 -32.086 7.02E-06 22.197 0.692 y y y ruditapes2_c986 -2.908 7.25E-06 63.511 21.843 y y y ruditapes_c14063 -3.27 7.28E-06 55.011 16.822 y y y ruditapes_c14752 -5.724 7.40E-06 34.815 6.083 y y y ruditapes_s38846 -2.696 7.47E-06 70.348 26.095 y y y ruditapes_c348 -1.758 7.48E-06 173.332 98.612 y y y ruditapes_c4844 -3.076 7.65E-06 58.825 19.123 y y y ruditapes_c2895 -2.306 7.76E-06 90.678 39.322 y y y ruditapes_c27435 -3.331 7.89E-06 53.493 16.061 y y y ruditapes_c16158 -18.584 8.26E-06 23.431 1.261 y y y ruditapes2_c1656 -2.409 8.36E-06 mitochondrial processing peptidase beta subunit "/// 0005811 // lipid particle /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0046872 // metal ion binding /// 0005750 // mitochondrial respiratory chain complex III /// 0016485 // protein processing /// 0008121 // ubiquinol-cytochrome-c reductase activity /// 0017087 // mitochondrial processing peptidase complex" 83.279 34.575 y y y ruditapes_c1195 -3.846 8.48E-06 vacuolar atp synthase 16 kda proteolipid subunit "/// 0005794 // Golgi apparatus /// 0005774 // vacuolar membrane /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0005515 // protein binding /// 0005764 // lysosome /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0016021 // integral to membrane /// 0033179 // proton-transporting V-type ATPase, V0 domain /// 0060059 // embryonic retina morphogenesis in camera-type eye /// 0044419 // interspecies interaction between organisms" 45.964 11.95 y y y ruditapes_c1835 -3.234 8.56E-06 54.863 16.966 y y y ruditapes2_c862 -3.016 8.56E-06 59.633 19.773 y y y ruditapes_c21703 -6.248 8.57E-06 PREDICTED: similar to CG13990-PA [Rattus norvegicus] 32.713 5.236 y y y ruditapes_c10701 -3.888 8.63E-06 45.438 11.686 y y y ruditapes_c23494 -22.476 8.87E-06 22.611 1.006 y y y ruditapes_c28076 -7.513 8.89E-06 29.868 3.976 y y y ruditapes_c9340 -2.951 8.93E-06 61.051 20.686 y y y ruditapes_c26892 -2.875 8.95E-06 63.172 21.972 y y y ruditapes_c7174 -9.749 9.00E-06 27.064 2.776 y y y ruditapes_c15573 -3.38 9.04E-06 51.956 15.372 y y y ruditapes_c23974 -2.351 9.22E-06 86.108 36.63 y y y ruditapes2_c3040 -26.47 9.47E-06 22.008 0.831 y y y ruditapes_c28981 -2.761 9.57E-06 66.361 24.035 y y y ruditapes_lrc34608 -4.608 9.72E-06 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 39.08 8.481 y y y ruditapes_lrc27368 -65.045 9.78E-06 20.489 0.315 y y y ruditapes_c25910 -3.889 1.00E-05 44.787 11.517 y y y ruditapes_c27986 -2.789 1.00E-05 65.155 23.365 y y y ruditapes_c26862 -4.557 1.00E-05 39.294 8.623 y y y ruditapes_c30588 -3.821 1.02E-05 45.425 11.888 y y y ruditapes_lrc8611 -5.319 1.02E-05 35.265 6.63 y y y ruditapes2_c6237 -2.001 1.03E-05 118.752 59.352 y y y ruditapes2_c3334 -1.677 1.04E-05 ribosomal protein l5 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding /// 0042273 // ribosomal large subunit biogenesis 195.335 116.483 y y y ruditapes_lrc25018 -2.961 1.04E-05 59.923 20.24 y y y ruditapes2_c1701 -2.866 1.06E-05 62.411 21.779 y y y ruditapes_c34196 -3.324 1.08E-05 52.013 15.646 y y y ruditapes_c30468 -2.745 1.11E-05 65.958 24.025 y y y ruditapes_lrc33999 4.996 1.13E-05 40s ribosomal protein s10 /// 0005840 // ribosome 7.198 35.96 y y y ruditapes_c17707 -2.536 1.14E-05 74.151 29.237 y y y ruditapes_c19121 -2.719 1.15E-05 66.662 24.521 y y y ruditapes_c36527 -1.745 1.17E-05 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 169.785 97.313 y y y ruditapes_c9736 -5.177 1.18E-05 ependymin related protein 1 35.386 6.835 y y y ruditapes_c8694 -2.687 1.19E-05 67.575 25.148 y y y ruditapes2_c212 -3.146 1.20E-05 aldehyde dehydrogenase 1a1 /// 0055114 // oxidation reduction /// 0002072 // optic cup morphogenesis involved in camera-type eye development /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0042573 // retinoic acid metabolic process /// 0021768 // nucleus accumbens development /// 0005829 // cytosol /// 0048048 // embryonic eye morphogenesis /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity /// 0004028 // 3-chloroallyl aldehyde dehydrogenase activity /// 0060166 // olfactory pit development /// 0001758 // retinal dehydrogenase activity 54.792 17.415 y y y ruditapes_c28062 -3.992 1.23E-05 42.866 10.737 y y y ruditapes_c26471 -2.752 1.24E-05 65.004 23.623 y y y ruditapes_c12037 -2.499 1.24E-05 75.247 30.105 y y y ruditapes_c2307 -5.319 1.25E-05 small nuclear ribonucleoprotein sm d3 /// 0007417 // central nervous system development /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0048542 // lymph gland development /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0003676 // nucleic acid binding /// 0007422 // peripheral nervous system development /// 0005829 // cytosol /// 0030182 // neuron differentiation /// 0007517 // muscle organ development /// 0000387 // spliceosomal snRNP biogenesis /// 0007052 // mitotic spindle organization 34.566 6.499 y y y ruditapes_lrc15185 -2.253 1.27E-05 ribosomal protein l17 /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 90.35 40.11 y y y ruditapes_c16306 -3.218 1.29E-05 52.998 16.467 y y y ruditapes2_c2765 -1.964 1.29E-05 121.481 61.866 y y y ruditapes_c3931 -1.971 1.29E-05 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0030235 // nitric-oxide synthase regulator activity /// 0045429 // positive regulation of nitric oxide biosynthetic process /// 0005737 // cytoplasm /// 0030911 // TPR domain binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 120.35 61.056 y y y ruditapes2_c784 -2.6 1.29E-05 70.413 27.083 y y y ruditapes2_c208 -1.58 1.32E-05 236.857 149.933 y y y ruditapes_c12574 -3.259 1.36E-05 51.946 15.938 y y y ruditapes_c1275 -1.76 1.36E-05 162.764 92.471 y y y ruditapes_c12167 -3.764 1.39E-05 44.652 11.862 y y y ruditapes_c25914 -4.745 1.41E-05 36.872 7.771 y y y ruditapes_lrc18243 -2.536 1.41E-05 72.544 28.602 y y y ruditapes_lrc23736 -1.548 1.42E-05 cg5499-pa /// 0005811 // lipid particle /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0005700 // polytene chromosome /// 0000786 // nucleosome 255.223 164.885 y y y ruditapes_c7495 -2.236 1.42E-05 90.637 40.54 y y y ruditapes_c21102 -3.75 1.45E-05 44.619 11.898 y y y ruditapes_c13244 -3.027 1.46E-05 56.317 18.605 y y y ruditapes_c30322 -2.843 1.47E-05 61.052 21.474 y y y ruditapes_c3280 -2.388 1.47E-05 79.909 33.457 y y y ruditapes_c3457 -6.788 1.48E-05 29.74 4.381 y y y ruditapes2_c410 -2.234 1.48E-05 90.398 40.47 y y y ruditapes_c7252 -3.861 1.49E-05 43.302 11.214 y y y ruditapes_c5027 -4.164 1.52E-05 40.466 9.719 y y y ruditapes_c33520 -2.88 1.53E-05 alkaline ceramidase 59.766 20.751 y y y ruditapes_lrc22700 -3.97 1.54E-05 42.095 10.602 y y y ruditapes_s36768 -11.165 1.57E-05 24.581 2.202 y y y ruditapes_c21945 -6.671 1.57E-05 29.798 4.467 y y y ruditapes_c4264 -3.069 1.58E-05 54.916 17.892 y y y ruditapes2_c253 -2.345 1.59E-05 81.911 34.925 y y y ruditapes_c35290 -2.881 1.62E-05 59.4 20.617 y y y ruditapes_c30532 -3.139 1.64E-05 53.262 16.97 y y y ruditapes_c12171 -2.448 1.66E-05 75.672 30.913 y y y ruditapes_c14586 -7.303 1.70E-05 28.346 3.881 y y y ruditapes_c22372 -5.61 1.70E-05 32.442 5.783 y y y ruditapes_c6190 -4.629 1.72E-05 36.784 7.947 y y y ruditapes_c31654 -8.302 1.72E-05 26.845 3.234 y y y ruditapes_c7453 -3.854 1.74E-05 42.714 11.084 y y y ruditapes_c17941 -4.467 1.79E-05 l _3 /// 0044238 // primary metabolic process /// 0034960 // cellular biopolymer metabolic process 37.624 8.423 y y y ruditapes_lrc34815 -2.915 1.80E-05 57.839 19.844 y y y ruditapes2_c2785 -3.305 1.82E-05 49.644 15.019 y y y ruditapes2_c2782 -2.513 1.84E-05 71.694 28.531 y y y ruditapes_c21699 -3.041 1.88E-05 54.554 17.941 y y y ruditapes_c16294 -9.502 1.95E-05 25.258 2.658 y y y ruditapes2_c239 -1.736 1.96E-05 163.622 94.26 y y y ruditapes2_c4438 1.379 2.04E-05 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 288.393 397.701 y n n ruditapes_c15879 -3.011 2.05E-05 54.739 18.182 y y y ruditapes_c11277 -2.071 2.06E-05 102.294 49.394 y y y ruditapes_c4265 -2.185 2.09E-05 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0030235 // nitric-oxide synthase regulator activity /// 0045429 // positive regulation of nitric oxide biosynthetic process /// 0005737 // cytoplasm /// 0030911 // TPR domain binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 91.204 41.748 y y y ruditapes_c8858 -2.367 2.10E-05 78.229 33.044 y y y ruditapes_c14181 -2.67 2.15E-05 64.183 24.04 y y y ruditapes2_c571 -2.759 2.17E-05 mitochondrial atp synthase gamma-subunit "/// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 61.158 22.17 y y y ruditapes_c9493 -2.261 2.22E-05 84.653 37.434 y y y ruditapes_lrc33600 -2.607 2.22E-05 malate dehydrogenase nad /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0005488 // binding /// 0006096 // glycolysis /// 0005829 // cytosol 66.282 25.42 y y y ruditapes_c5153 -2.486 2.23E-05 71.486 28.755 y y y ruditapes_c3705 -3.127 2.28E-05 51.671 16.522 y y y ruditapes_c29552 -8.044 2.29E-05 26.384 3.28 y y y ruditapes_c14519 -3.38 2.30E-05 47.264 13.983 y y y ruditapes_c31551 -4.104 2.33E-05 39.182 9.547 y y y ruditapes_lrc36503 -2.716 2.35E-05 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 61.998 22.827 y y y ruditapes_c31362 -2.478 2.36E-05 71.48 28.851 y y y ruditapes2_c2740 -2.845 2.44E-05 57.877 20.345 y y y ruditapes2_lrc4385 -1.975 2.46E-05 111.984 56.691 y y y ruditapes_c15883 -3.449 2.47E-05 45.907 13.311 y y y ruditapes_c2360 -2.694 2.51E-05 62.314 23.133 y y y ruditapes_lrc21103 1.783 2.52E-05 cytochrome oxidase subunit 1 78.867 140.6 y y y ruditapes_c12081 -4.163 2.55E-05 38.351 9.213 y y y ruditapes_lrc17151 -3.235 2.55E-05 49.061 15.164 y y y ruditapes_c1813 -2.415 2.56E-05 73.98 30.629 y y y ruditapes_lrc34048 8.896 2.58E-05 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 2.801 24.918 y y y ruditapes_c11206 -1.977 2.64E-05 110.906 56.094 y y y ruditapes2_c1539 -8.742 2.69E-05 25.126 2.874 y y y ruditapes_c31831 -4.623 2.71E-05 35.093 7.591 y y y ruditapes2_c1044 -1.806 2.73E-05 140.34 77.723 y y y ruditapes_c17282 -4.428 2.78E-05 36.159 8.165 y y y ruditapes_c18580 -2.641 2.80E-05 63.429 24.02 y y y ruditapes2_c1916 -7.937 2.86E-05 pol-like protein 25.903 3.263 y y y ruditapes_c8113 -3.613 2.88E-05 43.059 11.918 y y y ruditapes_c16525 -2.335 2.91E-05 77.456 33.171 y y y ruditapes_c671 -2.798 2.91E-05 58.094 20.764 y y y ruditapes_c31326 -6.81 2.92E-05 27.635 4.058 y y y ruditapes_c15840 -3.351 2.96E-05 46.435 13.859 y y y ruditapes_c13674 -7.929 3.05E-05 25.725 3.244 y y y ruditapes_lrc8151 -2.089 3.07E-05 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0019903 // protein phosphatase binding /// 0043025 // cell soma /// 0005737 // cytoplasm 96.124 46.007 y y y ruditapes2_lrc5220 -3.169 3.09E-05 atp synthase beta subunit "/// 0005524 // ATP binding /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 49.221 15.533 y y y ruditapes_c32582 -7.46 3.09E-05 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 26.353 3.533 y y y ruditapes_c5883 -3.093 3.10E-05 50.656 16.379 y y y ruditapes_c8390 -2.64 3.20E-05 62.547 23.695 y y y ruditapes_c20783 -4.162 3.20E-05 37.417 8.99 y y y ruditapes_c4687 -3.095 3.24E-05 50.363 16.273 y y y ruditapes2_c4169 -1.791 3.29E-05 ribosomal protein l9 /// 0030529 // ribonucleoprotein complex 140.736 78.559 y y y ruditapes_c20906 -3.709 3.30E-05 41.353 11.15 y y y ruditapes_lrc28361 -7.8 3.30E-05 25.676 3.292 y y y ruditapes_c29255 -3.862 3.34E-05 39.756 10.293 y y y ruditapes2_c427 -2.042 3.38E-05 psmd1 protein /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005838 // proteasome regulatory particle 100.109 49.028 y y y ruditapes_c4664 -2.733 3.38E-05 59.057 21.606 y y y ruditapes2_c3354 -4.597 3.42E-05 tubulin polymerization-promoting protein family member 3 34.357 7.474 y y y ruditapes_c2144 -2.62 3.43E-05 62.804 23.973 y y y ruditapes2_c983 -1.876 3.58E-05 122.622 65.379 y y y ruditapes2_c129 -3.18 3.59E-05 lethal 35di 48.234 15.17 y y y ruditapes_c4903 -2.369 3.69E-05 73.545 31.049 y y y ruditapes2_c278 -1.231 3.70E-05 ribosomal protein s26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 932.866 757.636 y n n ruditapes_c3332 -2.236 3.80E-05 81.574 36.476 y y y ruditapes_c5061 -8.831 3.86E-05 24.056 2.724 y y y ruditapes_c2918 -5.013 3.87E-05 31.879 6.359 y y y ruditapes_c11908 -4.16 3.89E-05 36.637 8.806 y y y ruditapes_c6044 -3.388 3.89E-05 44.515 13.141 y y y ruditapes_c28587 -7.863 3.92E-05 25.11 3.194 y y y ruditapes_lrc32650 -13.949 3.92E-05 21.068 1.51 y y y ruditapes_c5146 -7.199 3.93E-05 26.065 3.621 y y y ruditapes_c30179 -2.502 3.99E-05 66.38 26.528 y y y ruditapes_c13888 -5.268 4.05E-05 30.702 5.828 y y y ruditapes2_c373 -2.034 4.10E-05 cytochrome somatic "/// 0042743 // hydrogen peroxide metabolic process /// 0005759 // mitochondrial matrix /// 0006810 // transport /// 0006309 // DNA fragmentation involved in apoptosis /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0006123 // mitochondrial electron transport, cytochrome c to oxygen /// 0020037 // heme binding /// 0005746 // mitochondrial respiratory chain /// 0005625 // soluble fraction /// 0006979 // response to oxidative stress /// 0005829 // cytosol /// 0008635 // activation of caspase activity by cytochrome c /// 0045155 // electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity /// 0008289 // lipid binding" 98.879 48.623 y y y ruditapes_c23830 -2.065 4.15E-05 95.361 46.174 y y y ruditapes_c9143 -2.335 4.17E-05 74.438 31.882 y y y ruditapes_c10523 -4.163 4.19E-05 36.309 8.721 y y y ruditapes2_c2796 -1.309 4.19E-05 elongation factor 1-gamma /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 559.389 427.431 y n n ruditapes_c23623 -3.212 4.20E-05 46.826 14.578 y y y ruditapes_c3711 -3.494 4.43E-05 42.467 12.155 y y y ruditapes_lrc33003 -3.999 4.50E-05 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 37.268 9.318 y y y ruditapes_c3185 -7.902 4.52E-05 24.658 3.12 y y y ruditapes2_lrc4282 -2.781 4.62E-05 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 55.652 20.013 y y y ruditapes_c30585 -3.456 4.63E-05 42.738 12.367 y y y ruditapes_c15626 -2.942 4.79E-05 51.38 17.467 y y y ruditapes_c25311 -2.808 4.82E-05 54.643 19.463 y y y ruditapes_s39636 -2.963 4.85E-05 50.825 17.153 y y y ruditapes2_c3175 -2.198 4.93E-05 81.951 37.284 y y y ruditapes_lrc30168 -8.45 4.93E-05 23.779 2.814 y y y ruditapes_c15979 -3.299 4.98E-05 44.552 13.503 y y y ruditapes_lrc33608 -29.403 5.03E-05 18.231 0.62 y y y ruditapes_lrc11196 -9.914 5.07E-05 22.424 2.262 y y y ruditapes_c12688 -9.917 5.19E-05 22.36 2.255 y y y ruditapes_c14646 -2.511 5.21E-05 64.017 25.49 y y y ruditapes_c15595 -1.872 5.26E-05 117.906 62.967 y y y ruditapes2_c103 -2.759 5.33E-05 55.366 20.071 y y y ruditapes_c22563 -4.824 5.38E-05 31.522 6.534 y y y ruditapes2_c764 -2.843 5.41E-05 52.99 18.637 y y y ruditapes_c6955 -2.267 5.43E-05 76.265 33.634 y y y ruditapes2_lrc6116 -4.595 5.43E-05 32.611 7.098 y y y ruditapes_c23630 -3.128 5.52E-05 46.81 14.963 y y y ruditapes_c1210 -2.119 5.57E-05 87.146 41.123 y y y ruditapes_c3732 -5.129 5.61E-05 30.089 5.866 y y y ruditapes_c17607 -7.988 5.69E-05 scavenger receptor class member 2 23.903 2.992 y y y ruditapes_c5181 -2.757 5.70E-05 54.985 19.947 y y y ruditapes_lrc36808 -3.254 5.71E-05 thaumatin-like protein /// 0048046 // apoplast /// 0010224 // response to UV-B /// 0009627 // systemic acquired resistance /// 0031540 // regulation of anthocyanin biosynthetic process /// 0005515 // protein binding /// 0016023 // cytoplasmic membrane-bounded vesicle /// 0005618 // cell wall 44.536 13.685 y y y ruditapes2_c1288 -2.389 5.84E-05 68.731 28.768 y y y ruditapes_lrc35682 -2.264 5.89E-05 75.798 33.487 y y y ruditapes_c2662 -2.146 5.97E-05 84.168 39.22 y y y ruditapes2_c2878 -2.984 5.99E-05 49.138 16.465 y y y ruditapes_c10624 -3.49 6.09E-05 40.974 11.741 y y y ruditapes_c15768 -6.257 6.47E-05 26.342 4.21 y y y ruditapes2_c1764 -5.094 6.49E-05 mitochondrial ribosomal protein s15 "/// 0044403 // symbiosis, encompassing mutualism through parasitism" 29.715 5.833 y y y ruditapes2_c857 -2.023 6.50E-05 thioredoxin /// 0009987 // cellular process 94.837 46.871 y y y ruditapes_lrc20388 -3.109 6.52E-05 60s ribosomal protein l9 46.251 14.877 y y y ruditapes_c21085 -1.975 6.69E-05 100.057 50.657 y y y ruditapes_c12598 -4.252 6.87E-05 33.691 7.924 y y y ruditapes2_c18 -1.405 6.91E-05 339.753 241.878 y n n ruditapes2_c834 -1.968 7.00E-05 100.472 51.065 y y y ruditapes_c28591 -2.266 7.08E-05 glucosidase 2 subunit beta 74.013 32.664 y y y ruditapes_c9052 -3.383 7.14E-05 41.554 12.284 y y y ruditapes_lrc36006 -3.11 7.18E-05 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 45.698 14.694 y y y ruditapes2_lrc4584 -5.355 7.32E-05 predicted protein [Nematostella vectensis] 28.367 5.297 y y y ruditapes2_c2295 -3.286 7.39E-05 42.717 12.998 y y y ruditapes2_c160 1.372 7.46E-05 ribosomal protein l3 /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 258.274 354.276 y n n ruditapes2_c3357 -5.316 7.47E-05 28.429 5.348 y y y ruditapes2_c687 -2.407 7.48E-05 65.859 27.36 y y y ruditapes2_c217 -3.218 7.56E-05 43.626 13.556 y y y ruditapes_c15143 -7.911 7.62E-05 23.181 2.93 y y y ruditapes_c4374 -2.096 7.72E-05 85.846 40.959 y y y ruditapes_c19275 -1.494 7.82E-05 246.539 165.066 y n n ruditapes_c27151 -2.867 7.87E-05 50.111 17.476 y y y ruditapes_c27079 -2.718 7.92E-05 53.958 19.853 y y y ruditapes2_lrc3187 -2.571 7.94E-05 58.658 22.815 y y y ruditapes_c17349 -7.888 8.10E-05 23.035 2.92 y y y ruditapes_c5444 -2.499 8.18E-05 61.174 24.481 y y y ruditapes_c21212 -2.453 8.19E-05 63.09 25.724 y y y ruditapes2_lrc5155 8.056 8.29E-05 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 2.808 22.622 y y y ruditapes_c12483 -4.898 8.36E-05 29.592 6.042 y y y ruditapes_c13467 -1.534 8.45E-05 217.451 141.783 y y y ruditapes_c4823 -2.099 8.48E-05 84.618 40.317 y y y ruditapes_lrc32519 -4.154 8.49E-05 translationally controlled tumor protein 33.473 8.057 y y y ruditapes_c28386 -3.759 8.49E-05 36.582 9.732 y y y ruditapes_c17255 -2.234 8.71E-05 74.188 33.213 y y y ruditapes_c4320 -13.214 8.76E-05 19.412 1.469 y y y ruditapes_c9531 -3.444 8.80E-05 39.749 11.542 y y y ruditapes_c13079 -3.184 8.86E-05 43.323 13.607 y y y ruditapes_c11864 -7.019 8.88E-05 23.959 3.414 y y y ruditapes_c626 -1.783 8.90E-05 127.095 71.282 y y y ruditapes2_c729 -2.309 8.94E-05 69.459 30.088 y y y ruditapes2_c868 -1.261 9.03E-05 ubiquitin b /// 0044267 // cellular protein metabolic process /// 0065007 // biological regulation /// 0005515 // protein binding /// 0044424 // intracellular part 678.934 538.294 y n n ruditapes_c3299 -20.411 9.08E-05 17.791 0.872 y y y ruditapes_c4635 -3.803 9.12E-05 35.868 9.431 y y y ruditapes_c13506 -4.303 9.21E-05 32.2 7.484 y y y ruditapes_c14017 -3.1 9.31E-05 44.445 14.336 y y y ruditapes_c30389 -3.131 9.40E-05 43.859 14.006 y y y ruditapes2_lrc4490 -1.953 9.41E-05 98.638 50.495 y y y ruditapes_c38334 -1.591 9.74E-05 ribosomal protein l35 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 184.367 115.879 y y y ruditapes_c2348 -3.553 9.76E-05 37.999 10.696 y y y ruditapes_c5617 -3.845 9.80E-05 35.196 9.155 y y y ruditapes_c27645 -2.718 9.90E-05 52.498 19.315 y y y ruditapes_c27673 -2.851 1.00E-04 49.023 17.193 y y y ruditapes_c4612 -2.218 1.01E-04 73.867 33.302 y y y ruditapes_c21267 -4.843 1.01E-04 29.135 6.016 y y y ruditapes_lrc33839 -2.241 1.04E-04 h3 histone family 3a /// 0001740 // Barr body /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 72.085 32.16 y y y ruditapes_lrc34669 -3.265 1.05E-04 41.239 12.632 y y y ruditapes2_c1051 -5.038 1.07E-04 28.162 5.59 y y y ruditapes2_c3343 -2.518 1.08E-04 calponin-like protein 58.37 23.18 y y y ruditapes_c27388 -2.58 1.08E-04 56.139 21.761 y y y ruditapes_c25676 -4.707 1.14E-04 29.279 6.22 y y y ruditapes_c5296 -3.413 1.15E-04 38.837 11.38 y y y ruditapes_c25365 2.239 1.17E-04 tubulin alpha-1 chain /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 30.861 69.094 y y y ruditapes2_c3244 -4.098 1.17E-04 calmodulin /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0030425 // dendrite /// 0007052 // mitotic spindle organization 32.523 7.937 y y y ruditapes2_lrc4789 -2.054 1.19E-04 apolipophorin precursor protein 85.136 41.452 y y y ruditapes_c13765 -2.803 1.19E-04 49.117 17.522 y y y ruditapes_lrc32199 -8.164 1.19E-04 21.66 2.653 y y y ruditapes_lrc10147 -6.028 1.20E-04 24.896 4.13 y y y ruditapes2_c1939 -2.956 1.22E-04 45.58 15.419 y y y ruditapes2_lrc4821 -2.612 1.23E-04 54.186 20.742 y y y ruditapes_c2613 -3.304 1.23E-04 tandem repeat galectin /// 0005529 // sugar binding 39.854 12.061 y y y ruditapes_c28575 -6.878 1.24E-04 23.185 3.371 y y y ruditapes_lrc32570 -2.62 1.25E-04 ribosomal protein l5 /// 0042254 // ribosome biogenesis /// 0005840 // ribosome /// 0006412 // translation /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding 53.835 20.544 y y y ruditapes_c31726 -4.84 1.25E-04 28.379 5.864 y y y ruditapes_lrc32583 1.634 1.29E-04 ribosomal protein s18 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006417 // regulation of translation 93.507 152.815 y y y ruditapes2_c230 -2.658 1.30E-04 sperm associated antigen 8 52.403 19.712 y y y ruditapes_lrc33828 -3.125 1.30E-04 alpha actin "/// 0005524 // ATP binding /// 0042643 // actomyosin, actin part /// 0016887 // ATPase activity /// 0014829 // vascular smooth muscle contraction /// 0030240 // muscle thin filament assembly /// 0031674 // I band /// 0030048 // actin filament-based movement /// 0006915 // apoptosis /// 0060047 // heart contraction /// 0008217 // regulation of blood pressure /// 0017022 // myosin binding /// 0055003 // cardiac myofibril assembly /// 0055008 // cardiac muscle tissue morphogenesis" 42.204 13.505 y y y ruditapes_c11962 -2.244 1.30E-04 69.933 31.171 y y y ruditapes_c16878 -3.116 1.31E-04 42.33 13.585 y y y ruditapes_c6074 -2.397 1.32E-04 61.848 25.803 y y y ruditapes2_lrc3853 -7.945 1.34E-04 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 21.564 2.714 y y y ruditapes_c25260 -4.091 1.34E-04 32.007 7.823 y y y ruditapes2_lrc2932 -2.819 1.35E-04 47.95 17.008 y y y ruditapes_c12758 -25.842 1.36E-04 16.38 0.634 y y y ruditapes_c4049 -2.898 1.37E-04 46.109 15.913 y y y ruditapes_c1929 -2.735 1.38E-04 49.865 18.23 y y y ruditapes_lrc19157 -36.995 1.38E-04 hypothetical protein ZyciCp074 [Zygnema circumcarinatum] 15.771 0.426 y y y ruditapes_c31276 -2.55 1.41E-04 55.308 21.692 y y y ruditapes_c16730 -4.427 1.41E-04 29.82 6.736 y y y ruditapes2_lrc3922 -11.096 1.42E-04 19.117 1.723 y y y ruditapes_c7798 -4.1 1.44E-04 31.667 7.724 y y y ruditapes_lrc33008 -2.734 1.50E-04 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 49.35 18.048 y y y ruditapes_c15976 -2.678 1.51E-04 50.831 18.98 y y y ruditapes_c21923 -3.848 1.51E-04 33.273 8.647 y y y ruditapes_c8539 -2.844 1.52E-04 46.621 16.392 y y y ruditapes_c2791 -2.122 1.53E-04 76.701 36.144 y y y ruditapes2_c1323 -3.754 1.53E-04 calreticulin /// 0005783 // endoplasmic reticulum /// 0005509 // calcium ion binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 34 9.057 y y y ruditapes2_lrc4666 -2.824 1.55E-04 46.95 16.623 y y y ruditapes_c31678 -4.133 1.56E-04 31.12 7.53 y y y ruditapes_c29385 -3.042 1.57E-04 42.557 13.991 y y y ruditapes_c1316 1.422 1.58E-04 187.328 266.314 y n n ruditapes_c9561 -2.851 1.58E-04 46.255 16.225 y y y ruditapes_c13605 -3.848 1.59E-04 33.068 8.594 y y y ruditapes_c13529 -9.041 1.60E-04 20.065 2.219 y y y ruditapes2_lrc4480 -1.597 1.62E-04 170.317 106.663 y y y ruditapes_lrc37105 -4.045 1.64E-04 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 31.494 7.787 y y y ruditapes_c4894 -1.994 1.67E-04 87.208 43.739 y y y ruditapes_lrc33883 -2.062 1.68E-04 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 80.612 39.088 y y y ruditapes_c16615 -2.266 1.71E-04 endonuclease reverse transcriptase 66.186 29.207 y y y ruditapes_c2746 -3.065 1.75E-04 41.567 13.562 y y y ruditapes_c5040 -6.762 1.76E-04 22.336 3.303 y y y ruditapes_c2932 -10.047 1.77E-04 19.124 1.903 y y y ruditapes2_lrc3458 -16.635 1.78E-04 16.895 1.016 y y y ruditapes_c24461 -2.37 1.81E-04 60.496 25.522 y y y ruditapes_lrc34458 4.336 1.82E-04 basic transcription factor 3-like 4 6.673 28.934 y y y ruditapes_c2313 -2.028 1.85E-04 82.659 40.755 y y y ruditapes2_c1928 -5.718 1.86E-04 24.221 4.236 y y y ruditapes2_lrc3253 -3.072 1.87E-04 41.077 13.369 y y y ruditapes_c4939 -5.61 1.88E-04 24.465 4.361 y y y ruditapes_c17014 -10.258 1.88E-04 18.846 1.837 y y y ruditapes_c258 -2.283 1.90E-04 64.346 28.181 y y y ruditapes_c13098 -2.77 1.91E-04 46.901 16.931 y y y ruditapes2_lrc3327 -11.995 1.93E-04 17.964 1.498 y y y ruditapes_c2074 -1.614 1.93E-04 40s ribosomal protein s9 /// 0006414 // translational elongation /// 0008284 // positive regulation of cell proliferation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0019843 // rRNA binding /// 0045182 // translation regulator activity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 159.695 98.924 y y y ruditapes_c19008 -3.679 1.94E-04 33.567 9.124 y y y ruditapes_c5319 -2.532 1.96E-04 53.546 21.15 y y y ruditapes_c4418 -4.305 1.98E-04 29.152 6.772 y y y ruditapes2_c4058 -7.561 1.99E-04 20.889 2.763 y y y ruditapes_c27234 -2.208 2.00E-04 68.17 30.87 y y y ruditapes_c12419 -4.062 2.01E-04 30.533 7.517 y y y ruditapes_c25678 -7.191 2.05E-04 21.268 2.958 y y y ruditapes_c2510 -3.646 2.05E-04 33.623 9.223 y y y ruditapes2_c526 -1.422 2.05E-04 277.182 194.97 y n n ruditapes2_c2609 -3.624 2.06E-04 33.811 9.331 y y y ruditapes_lrc33766 4.474 2.08E-04 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 6.204 27.753 y y y ruditapes_c6225 -4.25 2.08E-04 29.264 6.885 y y y ruditapes_c4402 -3.386 2.08E-04 36.203 10.692 y y y ruditapes_c11157 -3.349 2.09E-04 36.623 10.935 y y y ruditapes_c7406 -1.876 2.12E-04 98.394 52.436 y y y ruditapes_c28936 -2.618 2.13E-04 50.223 19.183 y y y ruditapes2_c3137 -2.101 2.14E-04 74.903 35.649 y y y ruditapes_lrc32804 -2.521 2.16E-04 rna-binding expressed 53.184 21.096 y y y ruditapes_lrc35616 -3.314 2.19E-04 36.813 11.108 y y y ruditapes2_c1279 1.233 2.20E-04 cytochrome c subunit ii /// 0006810 // transport /// 0022900 // electron transport chain /// 0005507 // copper ion binding /// 0004129 // cytochrome-c oxidase activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 527.449 650.26 y n n ruditapes_c27238 -2.935 2.21E-04 42.535 14.493 y y y ruditapes2_c25 -1.374 2.22E-04 ribosomal protein l18 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 331.242 241.013 y n n ruditapes_c27965 -2.995 2.25E-04 41.355 13.81 y y y ruditapes_c13905 -6.55 2.26E-04 21.926 3.347 y y y ruditapes_lrc16474 -3.564 2.26E-04 h3 family 3b /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 33.928 9.52 y y y ruditapes_c314 -3.456 2.28E-04 mitochondrial ribosomal protein l24 /// 0044424 // intracellular part 34.98 10.121 y y y ruditapes2_c1788 -1.975 2.28E-04 85.536 43.311 y y y ruditapes_c10194 -2.667 2.28E-04 48.373 18.136 y y y ruditapes_c23934 -3.854 2.28E-04 dead (asp-glu-ala-asp) box polypeptide 49 /// 0003676 // nucleic acid binding /// 0000166 // nucleotide binding /// 0004386 // helicase activity 31.434 8.156 y y y ruditapes_c3063 -2.046 2.31E-04 78.595 38.409 y y y ruditapes_lrc30423 -1.935 2.31E-04 receptor of activated kinase c 1 /// 0019903 // protein phosphatase binding /// 0043025 // cell soma /// 0005737 // cytoplasm 89.789 46.399 y y y ruditapes_lrc34660 2.621 2.32E-04 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 18.442 48.345 y y y ruditapes_c11440 -2.166 2.34E-04 69.352 32.013 y y y ruditapes_c31843 -7.524 2.35E-04 20.459 2.719 y y y ruditapes2_lrc6231 -3.368 2.39E-04 60s ribosomal protein l13 /// 0030529 // ribonucleoprotein complex /// 0051726 // regulation of cell cycle 35.736 10.611 y y y ruditapes_c29017 -2.405 2.39E-04 56.759 23.597 y y y ruditapes_c31354 -8.707 2.41E-04 19.244 2.21 y y y ruditapes_c8651 -1.877 2.41E-04 96.538 51.424 y y y ruditapes2_lrc5010 1.906 2.52E-04 ribosomal protein s16 /// 0005811 // lipid particle /// 0042254 // ribosome biogenesis /// 0005488 // binding /// 0015935 // small ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0005829 // cytosol 46.494 88.626 y y y ruditapes_c3244 -2.91 2.53E-04 42.202 14.504 y y y ruditapes_c6938 -1.65 2.55E-04 142.123 86.144 y y y ruditapes_c16464 -3.961 2.58E-04 30.151 7.612 y y y ruditapes_c1974 -3.616 2.59E-04 32.822 9.077 y y y ruditapes_c16708 -3.894 2.59E-04 radial spokehead-like 3 30.587 7.855 y y y ruditapes2_c3038 1.592 2.61E-04 95.942 152.714 y y y ruditapes_c24830 -3.269 2.62E-04 36.444 11.148 y y y ruditapes_c30584 -2.322 2.62E-04 59.65 25.689 y y y ruditapes_lrc16484 -2.106 2.63E-04 72.404 34.382 y y y ruditapes_c13142 -1.961 2.68E-04 85.146 43.428 y y y ruditapes_c22917 -5.949 2.71E-04 22.485 3.78 y y y ruditapes_c13226 -4.535 2.74E-04 26.768 5.903 y y y ruditapes_c26237 -2.058 2.75E-04 75.701 36.78 y y y ruditapes_c25022 -3.884 2.75E-04 30.408 7.829 y y y ruditapes_c12475 -1.94 2.75E-04 87.045 44.868 y y y ruditapes_lrc33717 4.299 2.77E-04 6.392 27.48 y y y ruditapes2_c2657 -3.23 2.78E-04 36.634 11.341 y y y ruditapes_c12680 -2.025 2.79E-04 78.375 38.7 y y y ruditapes2_c2873 -1.93 2.80E-04 87.961 45.573 y y y ruditapes_c38063 -3.614 2.83E-04 32.428 8.972 y y y ruditapes_lrc34587 -4.914 2.83E-04 25.146 5.117 y y y ruditapes_c16935 -4.296 2.86E-04 27.748 6.459 y y y ruditapes2_c245 1.593 2.89E-04 ribosomal protein s4 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0008284 // positive regulation of cell proliferation /// 0045727 // positive regulation of translation /// 0019843 // rRNA binding /// 0005844 // polysome /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 94.264 150.148 y y y ruditapes_c2633 -3.413 2.90E-04 34.277 10.044 y y y ruditapes_c24103 -2.29 2.91E-04 60.351 26.36 y y y ruditapes2_c1663 -8.154 2.92E-04 19.202 2.355 y y y ruditapes_c23132 -2.662 2.92E-04 46.857 17.602 y y y ruditapes_lrc17051 -2.518 2.94E-04 51.044 20.27 y y y ruditapes_c12664 -14.931 2.94E-04 16.094 1.078 y y y ruditapes_c15828 -3.348 2.99E-04 34.841 10.408 y y y ruditapes_c8603 -2.584 2.99E-04 transposase 48.864 18.91 y y y ruditapes_lrc33849 -4.248 3.00E-04 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 27.809 6.546 y y y ruditapes_c3430 -3.703 3.05E-04 hypothetical protein [Paramecium tetraurelia strain d4-2] 31.326 8.459 y y y ruditapes_c242 -1.66 3.07E-04 small ubiquitin-related modifier 3 precursor /// 0019941 // modification-dependent protein catabolic process /// 0000776 // kinetochore /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0006464 // protein modification process 135.479 81.606 y y y ruditapes_lrc32661 -2.185 3.08E-04 65.554 30.005 y y y ruditapes_c8992 -7.714 3.09E-04 19.482 2.526 y y y ruditapes_c30786 -2.639 3.10E-04 47.067 17.834 y y y ruditapes_lrc28707 -2.818 3.11E-04 42.817 15.197 y y y ruditapes_c4977 -1.859 3.12E-04 95.539 51.383 y y y ruditapes2_c1985 -6.143 3.16E-04 21.621 3.52 y y y ruditapes_c1539 -2.564 3.20E-04 48.987 19.106 y y y ruditapes_c12495 -7.105 3.22E-04 20.073 2.825 y y y ruditapes_c30277 -3.896 3.22E-04 29.648 7.61 y y y ruditapes2_c888 -2.795 3.23E-04 43.059 15.407 y y y ruditapes_c3475 -2.079 3.23E-04 heterogeneous nuclear ribonucleoprotein d-like /// 0003676 // nucleic acid binding /// 0010467 // gene expression /// 0016070 // RNA metabolic process /// 0044424 // intracellular part 72.3 34.774 y y y ruditapes_c16376 -1.998 3.25E-04 79.114 39.595 y y y ruditapes_lrc21475 -5.109 3.25E-04 ribosomal protein s4 /// 0003729 // mRNA binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0030528 // transcription regulator activity /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 24.013 4.7 y y y ruditapes_c9031 -3.784 3.26E-04 calmodulin /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0019861 // flagellum /// 0005515 // protein binding /// 0005509 // calcium ion binding 30.395 8.032 y y y ruditapes_c4274 -3.147 3.27E-04 36.896 11.723 y y y ruditapes_c4729 -1.808 3.30E-04 102.426 56.646 y y y ruditapes_c3929 -2.137 3.30E-04 67.931 31.784 y y y ruditapes_c3528 -4.229 3.31E-04 cytochrome c oxidase subunit viic 27.523 6.509 y y y ruditapes_c26349 -18.32 3.33E-04 15.217 0.831 y y y ruditapes_c5096 -3.653 3.36E-04 31.308 8.571 y y y ruditapes_c5545 -5.584 3.37E-04 22.599 4.047 y y y ruditapes_c666 -2.143 3.38E-04 67.323 31.417 y y y ruditapes2_lrc5256 -7.198 3.42E-04 ribosomal protein l21 19.778 2.748 y y y ruditapes_c29817 -2.991 3.46E-04 38.956 13.025 y y y ruditapes2_c2086 -3.16 3.46E-04 36.428 11.529 y y y ruditapes2_c932 -2.455 3.46E-04 tubulin alpha 3 /// 0005200 // structural constituent of cytoskeleton /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0000226 // microtubule cytoskeleton organization /// 0007018 // microtubule-based movement 51.983 21.174 y y y ruditapes_lrc33836 -2.781 3.46E-04 ribosomal protein l35a /// 0044238 // primary metabolic process /// 0010467 // gene expression /// 0044424 // intracellular part /// 0034960 // cellular biopolymer metabolic process 42.911 15.428 y y y ruditapes2_c2607 -3.41 3.48E-04 33.409 9.797 y y y ruditapes_c27067 -4.398 3.49E-04 26.467 6.018 y y y ruditapes_c1873 -2.568 3.50E-04 48.214 18.772 y y y ruditapes2_c907 -2.56 3.54E-04 48.392 18.903 y y y ruditapes_c6550 -2.756 3.60E-04 43.205 15.674 y y y ruditapes2_c1223 -3.507 3.61E-04 orf2-encoded protein 32.272 9.203 y y y ruditapes2_lrc4348 -3.312 3.62E-04 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 34.291 10.352 y y y ruditapes_c27893 -1.827 3.62E-04 98.116 53.703 y y y ruditapes_c30095 -4.038 3.63E-04 28.229 6.992 y y y ruditapes_c19474 -1.668 3.63E-04 130.105 78.009 y y y ruditapes_c12307 -10.152 3.66E-04 17.209 1.695 y y y ruditapes_c16886 -3.212 3.67E-04 35.421 11.027 y y y ruditapes_c30811 -6.774 3.68E-04 20.125 2.971 y y y ruditapes_c5762 -2.468 3.70E-04 51.035 20.682 y y y ruditapes_c3657 -8.31 3.73E-04 18.398 2.214 y y y ruditapes2_c648 -1.774 3.74E-04 106.404 59.988 y y y ruditapes_lrc34936 -11.886 3.85E-04 16.331 1.374 y y y ruditapes_c29110 -2.311 3.86E-04 56.912 24.627 y y y ruditapes_c29422 -5.511 3.89E-04 22.306 4.047 y y y ruditapes_c10414 -10.31 3.90E-04 16.971 1.646 y y y ruditapes_c2008 -4.351 3.92E-04 26.233 6.029 y y y ruditapes_lrc34578 -2.326 3.96E-04 ribosomal protein l5 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding 56.013 24.077 y y y ruditapes_c29522 -2.883 3.96E-04 40.058 13.894 y y y ruditapes2_lrc1552 -14.343 3.96E-04 15.541 1.084 y y y ruditapes_lrc39605 -1.498 3.98E-04 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 195.653 130.622 y n n ruditapes_c24879 -5.105 4.04E-04 23.275 4.559 y y y ruditapes_c30139 -7.005 4.11E-04 19.485 2.782 y y y ruditapes_c31798 -3.661 4.13E-04 30.291 8.273 y y y ruditapes_c7846 -2.017 4.18E-04 74.592 36.985 y y y ruditapes_lrc22655 -3.472 4.18E-04 31.899 9.187 y y y ruditapes_c6713 -7.678 4.18E-04 18.665 2.431 y y y ruditapes_lrc35261 -1.321 4.19E-04 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 389.248 294.721 y n n ruditapes_c17177 -2.276 4.26E-04 57.683 25.339 y y y ruditapes_c18585 -3.297 4.28E-04 33.618 10.197 y y y ruditapes_c5788 -3.154 4.30E-04 35.346 11.206 y y y ruditapes_s38992 -1.97 4.32E-04 beta-actin 78.485 39.839 y y y ruditapes_lrc34251 -2.589 4.37E-04 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 46.077 17.797 y y y ruditapes_lrc32975 -2.578 4.38E-04 46.375 17.989 y y y ruditapes_c16419 -3.902 4.39E-04 plasminogen /// 0005576 // extracellular region /// 0048518 // positive regulation of biological process /// 0005515 // protein binding /// 0051917 // regulation of fibrinolysis /// 0048513 // organ development /// 0008233 // peptidase activity /// 0050794 // regulation of cellular process 28.284 7.249 y y y ruditapes_c28374 -4.472 4.44E-04 25.204 5.636 y y y ruditapes2_lrc2215 -10.476 4.44E-04 16.559 1.581 y y y ruditapes_c31108 -2.142 4.47E-04 64.614 30.16 y y y ruditapes_c4053 -2.495 4.50E-04 48.66 19.501 y y y ruditapes_c15622 -5.793 4.51E-04 21.183 3.657 y y y ruditapes_c24526 -7.584 4.52E-04 18.548 2.446 y y y ruditapes_c4926 -4.805 4.52E-04 23.844 4.962 y y y ruditapes_c30497 -? 4.53E-04 12.301 0 y y y ruditapes_c12543 -2.651 4.54E-04 44.181 16.663 y y y ruditapes2_c341 -1.536 4.55E-04 172.036 112.026 y y y ruditapes_c34961 -1.571 4.58E-04 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 156.744 99.789 y y y ruditapes_c31105 28.78 4.58E-04 0.473 13.626 y y y ruditapes_c9078 -2.567 4.58E-04 46.368 18.063 y y y ruditapes_c28071 -2.801 4.65E-04 40.672 14.523 y y y ruditapes_c29473 -2.007 4.69E-04 74.162 36.955 y y y ruditapes_c19559 -4.274 4.74E-04 25.862 6.051 y y y ruditapes_c29300 -3.753 4.76E-04 28.964 7.718 y y y ruditapes_c22425 -4.429 4.80E-04 25.1 5.668 y y y ruditapes_lrc28448 -2.634 4.83E-04 44.211 16.787 y y y ruditapes_c1087 -4.295 4.85E-04 25.668 5.976 y y y ruditapes_c28244 -3.254 4.85E-04 33.475 10.289 y y y ruditapes2_c4174 -1.719 4.86E-04 112.766 65.612 y y y ruditapes_lrc23271 -2.286 4.86E-04 56.113 24.551 y y y ruditapes_lrc13721 -4.473 4.87E-04 24.849 5.555 y y y ruditapes_c1978 -2.026 4.92E-04 71.988 35.53 y y y ruditapes_c17243 -5.868 4.95E-04 20.738 3.534 y y y ruditapes_c16614 -10.209 4.96E-04 16.413 1.608 y y y ruditapes_c22016 -5.674 4.97E-04 21.126 3.723 y y y ruditapes_c19475 -2.024 4.99E-04 72.044 35.6 y y y ruditapes_c7837 -1.975 5.01E-04 76.262 38.612 y y y ruditapes_c14631 -3.947 5.02E-04 27.428 6.949 y y y ruditapes_c27736 -3.441 5.06E-04 31.291 9.095 y y y ruditapes_c9407 -4.258 5.06E-04 25.681 6.031 y y y ruditapes_c8802 -3.33 5.08E-04 32.385 9.725 y y y ruditapes_c11697 -2.847 5.12E-04 39.175 13.76 y y y ruditapes_c7323 -2.512 5.13E-04 47.179 18.782 y y y ruditapes_c12090 -2.623 5.13E-04 44.072 16.804 y y y ruditapes_c30618 -1.769 5.15E-04 102.268 57.824 y y y ruditapes_lrc38631 -3.03 5.21E-04 ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 36.029 11.89 y y y ruditapes_c25799 -2.572 5.22E-04 45.301 17.613 y y y ruditapes_c22652 -4.574 5.27E-04 24.135 5.277 y y y ruditapes2_c5657 -1.923 5.30E-04 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) /// 0006414 // translational elongation /// 0005515 // protein binding /// 0004871 // signal transducer activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0005853 // eukaryotic translation elongation factor 1 complex 80.787 42.012 y y y ruditapes2_c3054 -5.799 5.31E-04 20.65 3.561 y y y ruditapes_lrc28636 -2.471 5.33E-04 48.189 19.503 y y y ruditapes_c17007 -2.925 5.34E-04 loc398558 protein 37.549 12.837 y y y ruditapes2_c737 -2.727 5.38E-04 41.301 15.145 y y y ruditapes2_lrc3548 -3.322 5.38E-04 32.189 9.689 y y y ruditapes_c25467 -3.5 5.40E-04 30.427 8.694 y y y ruditapes2_c3715 -3.758 5.48E-04 calmodulin /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0006468 // protein amino acid phosphorylation /// 0004687 // myosin light chain kinase activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0000287 // magnesium ion binding /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0018298 // protein-chromophore linkage /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 28.295 7.528 y y y ruditapes_c14122 -2.467 5.54E-04 48.025 19.468 y y y ruditapes2_lrc3937 -2.374 5.72E-04 s-adenosylhomocysteine hydrolase 51.048 21.504 y y y ruditapes2_lrc4161 -2.02 5.73E-04 tyb_aplca ame: full=thymosin beta ame: full=beta-thymosin 70.81 35.058 y y y ruditapes2_c1394 -21.167 5.87E-04 13.651 0.645 y y y ruditapes_lrc25075 -4.161 5.88E-04 25.567 6.145 y y y ruditapes_c5039 -4.827 5.92E-04 22.799 4.723 y y y ruditapes_c24005 -5.731 5.93E-04 20.432 3.565 y y y ruditapes_c12277 -3.002 5.93E-04 35.727 11.902 y y y ruditapes_lrc38794 -21.896 5.94E-04 ribosomal protein s8 /// 0005811 // lipid particle /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 13.56 0.619 y y y ruditapes2_c1141 -3.646 5.96E-04 28.747 7.884 y y y ruditapes_c2654 -4.256 6.00E-04 25.019 5.878 y y y ruditapes2_c1677 -2.263 6.02E-04 radial spokehead-like 3 55.287 24.426 y y y ruditapes_lrc37411 -2.435 6.03E-04 48.443 19.896 y y y ruditapes_lrc21507 -4.151 6.05E-04 25.506 6.145 y y y ruditapes2_c258 -2.038 6.10E-04 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0030235 // nitric-oxide synthase regulator activity /// 0045429 // positive regulation of nitric oxide biosynthetic process /// 0030911 // TPR domain binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 68.651 33.678 y y y ruditapes2_c5058 -1.398 6.17E-04 ribosomal protein l18 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 258.67 185.086 y n n ruditapes_c20287 -6.186 6.19E-04 19.457 3.145 y y y ruditapes2_c2777 -3.942 6.22E-04 26.55 6.735 y y y ruditapes_c19244 -4.433 6.23E-04 24.077 5.431 y y y ruditapes2_c407 -2.158 6.26E-04 60.405 27.99 y y y ruditapes_c21832 -3.926 6.31E-04 26.587 6.771 y y y ruditapes_c646 -2.409 6.31E-04 48.978 20.328 y y y ruditapes2_c1303 -3.463 6.32E-04 30.011 8.665 y y y ruditapes_c22723 -2.828 6.32E-04 38.25 13.524 y y y ruditapes_s38677 -6.203 6.33E-04 ribosomal protein l32 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 19.358 3.121 y y y ruditapes_c30736 -3.498 6.38E-04 29.651 8.476 y y y ruditapes_c1340 -3.502 6.41E-04 29.6 8.453 y y y ruditapes2_c4526 -3.082 6.41E-04 34.154 11.082 y y y ruditapes_c466 -2.403 6.44E-04 49.032 20.402 y y y ruditapes2_c2715 -2.025 6.69E-04 68.682 33.917 y y y ruditapes2_c3286 -1.977 6.80E-04 72.53 36.693 y y y ruditapes_c27181 1.702 6.83E-04 61.71 105.042 y y y ruditapes_c14202 -2.932 6.83E-04 36.008 12.283 y y y ruditapes_c3961 -3.661 6.95E-04 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 27.942 7.632 y y y ruditapes_c7527 -2.413 6.95E-04 48.085 19.925 y y y ruditapes_c19380 -3.788 6.95E-04 27.047 7.14 y y y ruditapes_lrc11840 -4.913 6.96E-04 21.948 4.467 y y y ruditapes_c1799 -3.2 7.03E-04 32.187 10.06 y y y ruditapes2_c538 -2.595 7.10E-04 42.561 16.402 y y y ruditapes_c23952 -6.342 7.19E-04 18.749 2.956 y y y ruditapes_c32014 -3.932 7.20E-04 25.989 6.609 y y y ruditapes_lrc32869 -1.987 7.21E-04 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 70.955 35.711 y y y ruditapes_c17637 -5.38 7.25E-04 20.548 3.82 y y y ruditapes_c4224 -2.512 7.29E-04 44.628 17.768 y y y ruditapes_c1899 -3.221 7.31E-04 31.735 9.852 y y y ruditapes2_c2111 -52.926 7.34E-04 12.073 0.228 y y y ruditapes_c275 -2.219 7.35E-04 55.659 25.087 y y y ruditapes_c22414 -3.732 7.36E-04 27.177 7.282 y y y ruditapes_c22988 -4.686 7.36E-04 22.481 4.797 y y y ruditapes2_lrc4525 -1.807 7.44E-04 90.594 50.143 y y y ruditapes2_c1218 -4.508 7.44E-04 23.103 5.125 y y y ruditapes_c27879 -9.213 7.52E-04 15.888 1.725 y y y ruditapes_c4617 -3.612 7.56E-04 27.927 7.731 y y y ruditapes_c14533 -2.158 7.57E-04 58.589 27.15 y y y ruditapes2_c2444 -2.376 7.57E-04 48.72 20.502 y y y ruditapes2_c1731 -2.244 7.59E-04 54.132 24.119 y y y ruditapes_lrc33832 -3.097 7.70E-04 atp:adp antiporter /// 0005739 // mitochondrion /// 0016020 // membrane 32.96 10.643 y y y ruditapes_c29276 -2.645 7.74E-04 40.747 15.404 y y y ruditapes2_c4832 -1.464 7.77E-04 ribosomal protein s26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 195.983 133.866 y n n ruditapes_c30670 -75.608 7.81E-04 11.747 0.155 y y y ruditapes_c21880 -2.558 7.83E-04 42.829 16.742 y y y ruditapes2_lrc2617 -66.713 7.85E-04 11.8 0.177 y y y ruditapes2_c753 -2.016 7.92E-04 67.537 33.504 y y y ruditapes_lrc32644 -1.697 7.93E-04 receptor of activated kinase c 1 /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding 108.753 64.095 y y y ruditapes_s40275 -10.674 8.00E-04 15.007 1.406 y y y ruditapes2_c935 -2.948 8.02E-04 34.828 11.814 y y y ruditapes_lrc24599 -4.315 8.06E-04 23.589 5.467 y y y ruditapes_c4842 -25.377 8.09E-04 12.653 0.499 y y y ruditapes_c3557 -3.166 8.10E-04 31.835 10.054 y y y ruditapes_c2889 -1.627 8.22E-04 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 124.957 76.795 y y y ruditapes_lrc32264 -3.303 8.27E-04 atp binding 30.234 9.154 y y y ruditapes2_c1437 -1.952 8.30E-04 72.416 37.102 y y y ruditapes_c23571 -2.703 8.37E-04 38.951 14.409 y y y ruditapes2_lrc5145 -2.302 8.38E-04 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding 50.768 22.059 y y y ruditapes_c7478 -2.174 8.40E-04 56.741 26.104 y y y ruditapes_c15792 -8.339 8.45E-04 16.159 1.938 y y y ruditapes_c1474 -5.325 8.52E-04 20.134 3.781 y y y ruditapes2_c2656 -3.121 8.61E-04 32.063 10.274 y y y ruditapes_c5927 22.709 8.63E-04 0.558 12.668 y y y ruditapes_c5274 -7.872 8.63E-04 orf2-encoded protein 16.476 2.093 y y y ruditapes_c11897 -4.092 8.78E-04 24.291 5.936 y y y ruditapes_c16797 -3.797 8.92E-04 25.901 6.821 y y y ruditapes2_c561 -2.391 8.93E-04 46.892 19.611 y y y ruditapes_c851 -2.775 8.96E-04 37.1 13.372 y y y ruditapes_c26498 -3.646 9.05E-04 26.856 7.365 y y y ruditapes_c19920 -11.536 9.21E-04 14.338 1.243 y y y ruditapes_c4070 -2.089 9.23E-04 60.753 29.084 y y y ruditapes_lrc33154 -3.51 9.35E-04 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 27.75 7.906 y y y ruditapes_c6631 -2.57 9.39E-04 41.241 16.046 y y y ruditapes_lrc32238 -4.337 9.41E-04 ependymin precursor 22.893 5.279 y y y ruditapes_c12458 -2.936 9.56E-04 33.994 11.579 y y y ruditapes_c27829 -4.966 9.70E-04 20.62 4.152 y y y ruditapes_c17140 -3.757 9.76E-04 25.764 6.858 y y y ruditapes_c10181 -2.286 9.78E-04 50.098 21.915 y y y ruditapes_lrc28411 -4.01 9.80E-04 24.266 6.051 y y y ruditapes2_lrc4902 -2.224 9.88E-04 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 52.745 23.719 y y y ruditapes2_c3232 -1.886 9.92E-04 76.701 40.668 y y y ruditapes_lrc29654 -5.968 9.97E-04 18.339 3.073 y y y ruditapes_c5468 -5.863 1.00E-03 18.51 3.157 y y y ruditapes_c8275 -1.727 1.01E-03 98.577 57.064 y y y ruditapes_c24233 -4.602 1.02E-03 21.578 4.689 y y y ruditapes_c25573 -1.475 1.02E-03 180.402 122.281 y n n ruditapes_c3537 -1.954 1.03E-03 protein /// 0006810 // transport /// 0005216 // ion channel activity /// 0016020 // membrane 69.616 35.624 y y y ruditapes_lrc16668 -5.991 1.03E-03 18.193 3.037 y y y ruditapes_c18661 -5.946 1.04E-03 18.248 3.069 y y y ruditapes_c10221 -2.825 1.04E-03 35.288 12.492 y y y ruditapes2_lrc1763 -2.666 1.04E-03 38.312 14.371 y y y ruditapes_c18690 -4.118 1.04E-03 PREDICTED: similar to AGAP007723-PA [Tribolium castaneum] 23.468 5.7 y y y ruditapes_c4839 -2.533 1.05E-03 41.406 16.346 y y y ruditapes_lrc26499 -1.711 1.05E-03 60s acidic ribosomal protein p2 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 100.981 59.029 y y y ruditapes_lrc38134 -2.298 1.06E-03 eukaryotic translation elongation factor 1 beta 2 /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 48.954 21.299 y y y ruditapes2_c448 -1.877 1.06E-03 76.786 40.901 y y y ruditapes_c20667 -3.053 1.07E-03 31.744 10.398 y y y ruditapes2_c1385 -2.718 1.09E-03 36.93 13.588 y y y ruditapes_c24815 -2.316 1.10E-03 47.938 20.695 y y y ruditapes_lrc35779 -10.606 1.10E-03 14.238 1.342 y y y ruditapes_lrc38194 -8.178 1.10E-03 15.559 1.903 y y y ruditapes_c3371 -5.537 1.11E-03 protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 18.809 3.397 y y y ruditapes2_lrc4195 -3.67 1.12E-03 dynein light chain /// 0030286 // dynein complex /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 25.717 7.008 y y y ruditapes_lrc31862 -3.819 1.13E-03 24.727 6.474 y y y ruditapes2_c312 -2.594 1.13E-03 isocitrate dehydrogenase 2 (nadp+) mitochondrial /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0030145 // manganese ion binding /// 0006099 // tricarboxylic acid cycle /// 0004450 // isocitrate dehydrogenase (NADP+) activity /// 0006097 // glyoxylate cycle /// 0000287 // magnesium ion binding /// 0006102 // isocitrate metabolic process 39.35 15.167 y y y ruditapes2_c6069 13.651 1.15E-03 0.966 13.182 y y y ruditapes_c12005 -3.604 1.16E-03 26.044 7.227 y y y ruditapes_c7395 -2.591 1.17E-03 39.232 15.145 y y y ruditapes_c13710 -3.894 1.17E-03 24.155 6.203 y y y ruditapes_c12450 -2.273 1.17E-03 49.063 21.581 y y y ruditapes2_c1513 -2.807 1.17E-03 34.858 12.42 y y y ruditapes_c16860 -3.074 1.17E-03 30.968 10.075 y y y ruditapes_c23608 -3.247 1.17E-03 29.027 8.939 y y y ruditapes_c2215 -3.873 1.17E-03 24.263 6.265 y y y ruditapes_c2576 -4.764 1.19E-03 20.49 4.301 y y y ruditapes_c24957 -2.73 1.19E-03 36.142 13.24 y y y ruditapes_c6027 -6.267 1.19E-03 17.314 2.763 y y y ruditapes2_lrc2960 -1.965 1.20E-03 66.814 33.997 y y y ruditapes2_c266 -2.159 1.20E-03 54.08 25.046 y y y ruditapes_c14912 -4.875 1.21E-03 20.101 4.123 y y y ruditapes_c23589 -2.532 1.21E-03 40.417 15.961 y y y ruditapes2_lrc5750 -3.168 1.21E-03 ribosomal protein s18 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006417 // regulation of translation 29.709 9.378 y y y ruditapes_c6579 -2.746 1.21E-03 35.727 13.01 y y y ruditapes_c23465 -3.665 1.22E-03 25.403 6.932 y y y ruditapes_c18586 -2.857 1.22E-03 33.777 11.821 y y y ruditapes2_c2338 -1.837 1.22E-03 79.42 43.231 y y y ruditapes_c17483 -2.138 1.24E-03 54.911 25.683 y y y ruditapes_c22153 -4.173 1.26E-03 22.453 5.38 y y y ruditapes_c6169 -3.001 1.26E-03 31.506 10.499 y y y ruditapes_c15359 -3.348 1.27E-03 27.68 8.267 y y y ruditapes2_c575 -3.825 1.27E-03 cg8844 /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0016020 // membrane /// 0016491 // oxidoreductase activity 24.219 6.332 y y y ruditapes_c9639 -1.93 1.27E-03 69.253 35.881 y y y ruditapes_c2216 -2.688 1.27E-03 max dimerization protein 1 /// 0003700 // transcription factor activity /// 0003714 // transcription corepressor activity /// 0007275 // multicellular organismal development /// 0045449 // regulation of transcription /// 0008283 // cell proliferation /// 0005739 // mitochondrion /// 0005634 // nucleus 36.547 13.596 y y y ruditapes2_c6554 -1.835 1.27E-03 solute carrier family 25 member 3 isoform b precursor isoform 6 /// 0006810 // transport /// 0006091 // generation of precursor metabolites and energy /// 0015320 // phosphate carrier activity /// 0005743 // mitochondrial inner membrane /// 0005887 // integral to plasma membrane 79.094 43.101 y y y ruditapes_c22964 -3.403 1.27E-03 27.175 7.986 y y y ruditapes_c20740 -11.531 1.27E-03 13.558 1.176 y y y ruditapes2_c512 -4.258 1.28E-03 22.021 5.172 y y y ruditapes2_c2001 -1.914 1.28E-03 70.593 36.887 y y y ruditapes2_c3461 -2.973 1.28E-03 31.785 10.693 y y y ruditapes_c24278 -2.22 1.29E-03 50.522 22.763 y y y ruditapes_c11632 -2.777 1.29E-03 34.77 12.519 y y y ruditapes_lrc31232 -15.769 1.30E-03 12.569 0.797 y y y ruditapes_c27886 -3.644 1.31E-03 25.215 6.919 y y y ruditapes2_lrc7137 -4.095 1.31E-03 eukaryotic translation initiation factor subunit h /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0005792 // microsome 22.645 5.53 y y y ruditapes2_lrc2999 1.46 1.34E-03 ubiquitin b /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0007399 // nervous system development /// 0016043 // cellular component organization /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0050804 // regulation of synaptic transmission /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0048468 // cell development /// 0045941 // positive regulation of transcription 115.703 168.891 y n n ruditapes_c1208 -2.686 1.34E-03 beta-ig-h3 fasciclin 36.272 13.506 y y y ruditapes2_c3285 -1.892 1.35E-03 72.085 38.1 y y y ruditapes_c26610 -7.192 1.35E-03 15.845 2.203 y y y ruditapes_lrc13513 -2.575 1.35E-03 38.582 14.983 y y y ruditapes_c16958 -1.819 1.36E-03 80.123 44.042 y y y ruditapes_c1699 -2.943 1.37E-03 31.847 10.823 y y y ruditapes2_lrc4221 -1.612 1.37E-03 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 118.436 73.47 y y y ruditapes_c19160 -4.276 1.38E-03 21.656 5.064 y y y ruditapes2_c1024 -2.675 1.39E-03 36.245 13.549 y y y ruditapes2_c540 -1.722 1.39E-03 94.16 54.69 y y y ruditapes_c23602 -2.677 1.40E-03 36.156 13.506 y y y ruditapes_c11150 -2.958 1.42E-03 31.428 10.627 y y y ruditapes2_c340 -3.262 1.42E-03 27.922 8.559 y y y ruditapes2_c2094 -2.722 1.42E-03 35.191 12.927 y y y ruditapes_c2884 -1.534 1.42E-03 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 143.197 93.361 y y y ruditapes_c14522 -2.039 1.42E-03 59.473 29.17 y y y ruditapes2_c1471 -4.092 1.43E-03 22.331 5.458 y y y ruditapes_c26160 -2.954 1.44E-03 31.402 10.631 y y y ruditapes_c22030 -2.961 1.45E-03 31.244 10.55 y y y ruditapes_c7669 -2.26 1.45E-03 47.767 21.139 y y y ruditapes2_c1227 -3.479 1.46E-03 25.902 7.444 y y y ruditapes_c5479 -2.395 1.47E-03 42.872 17.899 y y y ruditapes_c8921 -12.018 1.47E-03 13.075 1.088 y y y ruditapes_c28325 -5.749 1.47E-03 17.497 3.043 y y y ruditapes_c23485 -24.057 1.48E-03 11.467 0.477 y y y ruditapes_c4803 -1.506 1.48E-03 153.801 102.131 y y y ruditapes_c19561 -2.368 1.49E-03 43.587 18.405 y y y ruditapes_c1004 -3.892 1.50E-03 23.133 5.944 y y y ruditapes_lrc35449 2.377 1.50E-03 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 17.708 42.095 y y y ruditapes2_c580 -1.728 1.55E-03 91.164 52.742 y y y ruditapes_lrc32516 -1.753 1.55E-03 87.242 49.771 y y y ruditapes_c1502 -2.189 1.56E-03 50.193 22.931 y y y ruditapes_c24279 -7.413 1.57E-03 15.218 2.053 y y y ruditapes2_c3037 -3.713 1.57E-03 atp:adp antiporter /// 0005200 // structural constituent of cytoskeleton /// 0005773 // vacuole /// 0005856 // cytoskeleton /// 0048767 // root hair elongation /// 0007010 // cytoskeleton organization /// 0005730 // nucleolus /// 0005488 // binding /// 0005886 // plasma membrane /// 0015865 // purine nucleotide transport /// 0005471 // ATP:ADP antiporter activity /// 0009507 // chloroplast /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0005618 // cell wall 23.944 6.449 y y y ruditapes_c16593 -3.837 1.57E-03 23.22 6.052 y y y ruditapes_c5268 -1.715 1.61E-03 92.782 54.098 y y y ruditapes_c953 -2.577 1.62E-03 37.285 14.467 y y y ruditapes_c11823 -3.391 1.62E-03 26.11 7.701 y y y ruditapes_lrc33070 -4.993 1.64E-03 predicted protein [Nematostella vectensis] 18.704 3.746 y y y ruditapes_c30312 -3.319 1.65E-03 26.642 8.026 y y y ruditapes_c4080 -5.164 1.65E-03 hypothetical protein NEMVEDRAFT_v1g145479 [Nematostella vectensis] 18.277 3.539 y y y ruditapes2_c244 -1.525 1.66E-03 connective tissue growth factor 142.676 93.558 y y y ruditapes_c22076 -2.789 1.66E-03 33.024 11.839 y y y ruditapes_c28987 -2.431 1.66E-03 40.817 16.789 y y y ruditapes_c33242 -3.777 1.68E-03 type alpha 1 23.282 6.165 y y y ruditapes_c3888 -1.895 1.69E-03 68.867 36.335 y y y ruditapes_c8214 -5.873 1.69E-03 16.845 2.868 y y y ruditapes_c5734 -4.009 1.69E-03 22.029 5.496 y y y ruditapes2_c1829 -3.598 1.70E-03 24.347 6.768 y y y ruditapes2_lrc1705 -2.508 1.70E-03 38.611 15.397 y y y ruditapes_lrc7546 -2.919 1.70E-03 30.913 10.591 y y y ruditapes2_lrc4262 1.638 1.71E-03 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 62.129 101.77 y y y ruditapes_c6458 -2.398 1.71E-03 41.554 17.326 y y y ruditapes_c8993 -2.625 1.72E-03 35.844 13.655 y y y ruditapes2_c1480 -1.743 1.74E-03 87.044 49.953 y y y ruditapes_lrc31429 -2.442 1.74E-03 40.148 16.437 y y y ruditapes_c5665 -27.682 1.74E-03 10.944 0.395 y y y ruditapes_c7732 -12.75 1.75E-03 12.469 0.978 y y y ruditapes_c14615 -5.08 1.76E-03 18.25 3.593 y y y ruditapes2_c3707 -2.258 1.76E-03 glutathione peroxidase 3 /// 0005615 // extracellular space /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0008134 // transcription factor binding /// 0006982 // response to lipid hydroperoxide /// 0004602 // glutathione peroxidase activity /// 0051289 // protein homotetramerization 46.16 20.445 y y y ruditapes_c31175 -2.818 1.77E-03 in family member (ttn-1) 32.175 11.419 y y y ruditapes2_lrc4816 -2.874 1.78E-03 apolipophorin precursor protein 31.272 10.879 y y y ruditapes_c4470 -2.221 1.78E-03 47.557 21.412 y y y ruditapes_c15995 -104.517 1.79E-03 10.042 0.096 y y y ruditapes2_c408 -2.202 1.79E-03 48.343 21.958 y y y ruditapes_c3847 -12.883 1.80E-03 12.366 0.96 y y y ruditapes_c35752 -3.178 1.81E-03 27.513 8.656 y y y ruditapes2_c788 -3.325 1.81E-03 26.122 7.856 y y y ruditapes2_lrc3852 -1.719 1.82E-03 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0005080 // protein kinase C binding /// 0007205 // activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding 90.038 52.378 y y y ruditapes_lrc22398 -3.618 1.82E-03 60s ribosomal protein l40 "/// 0005524 // ATP binding /// 0005634 // nucleus /// 0019079 // viral genome replication /// 0006508 // proteolysis /// 0003968 // RNA-directed RNA polymerase activity /// 0033897 // ribonuclease T2 activity /// 0005515 // protein binding /// 0019082 // viral protein processing /// 0005840 // ribosome /// 0006410 // transcription, RNA-dependent /// 0030528 // transcription regulator activity /// 0016021 // integral to membrane /// 0006412 // translation /// 0016567 // protein ubiquitination /// 0003723 // RNA binding /// 0004252 // serine-type endopeptidase activity /// 0003735 // structural constituent of ribosome /// 0045941 // positive regulation of transcription /// 0004386 // helicase activity" 23.896 6.605 y y y ruditapes_c7360 -2.879 1.84E-03 31.037 10.782 y y y ruditapes_c16561 -1.572 1.85E-03 123.197 78.354 y y y ruditapes_c15539 -3.761 1.85E-03 22.939 6.1 y y y ruditapes_c18257 -2.181 1.86E-03 48.94 22.436 y y y ruditapes_c1115 -2.752 1.86E-03 viral a-type inclusion protein 32.957 11.976 y y y ruditapes_c5343 -3.673 1.86E-03 23.441 6.382 y y y ruditapes2_c50 -2.003 1.87E-03 58.883 29.391 y y y ruditapes_c30189 -4.808 1.89E-03 18.708 3.891 y y y ruditapes_c12002 -6.258 1.91E-03 15.905 2.541 y y y ruditapes_c9962 -1.937 1.92E-03 63.602 32.836 y y y ruditapes_c30015 -2.91 1.92E-03 30.356 10.433 y y y ruditapes_c35886 -2.474 1.92E-03 38.577 15.59 y y y ruditapes2_c2223 -21.793 1.92E-03 hypothetical protein GZ9E5_47 [uncultured archaeon GZfos9E5] 11.067 0.508 y y y ruditapes_c19281 -1.874 1.93E-03 69.142 36.889 y y y ruditapes_c14659 -3.336 1.95E-03 25.681 7.699 y y y ruditapes_c30466 -2.616 1.95E-03 35.184 13.449 y y y ruditapes_c14015 -3.216 1.95E-03 26.746 8.317 y y y ruditapes2_c1098 -2.517 1.95E-03 37.388 14.855 y y y ruditapes_c10949 -5.337 1.95E-03 17.341 3.249 y y y ruditapes2_c3052 -2.465 1.95E-03 38.694 15.7 y y y ruditapes_c4050 -4.205 1.97E-03 20.549 4.887 y y y ruditapes_c2876 -2.084 1.98E-03 53.213 25.529 y y y ruditapes_c14170 1.264 1.99E-03 293.154 370.589 y n n ruditapes_lrc32598 -3.434 1.99E-03 24.784 7.217 y y y ruditapes2_lrc2178 -1.524 1.99E-03 actin /// 0030029 // actin filament-based process /// 0000910 // cytokinesis /// 0005488 // binding /// 0000003 // reproduction /// 0048513 // organ development /// 0009790 // embryonic development 138.184 90.678 y y y ruditapes_c1522 -2.444 2.02E-03 39.019 15.967 y y y ruditapes_c9586 -5.268 2.05E-03 17.329 3.289 y y y ruditapes_c9688 -2.436 2.05E-03 39.093 16.05 y y y ruditapes_c19287 -5.063 2.06E-03 17.764 3.509 y y y ruditapes_c25005 -1.732 2.06E-03 85.835 49.552 y y y ruditapes_c15077 -2.996 2.06E-03 28.823 9.62 y y y ruditapes_c17037 -2.318 2.06E-03 42.628 18.387 y y y ruditapes_lrc35398 -1.672 2.06E-03 slc25a3-prov protein /// 0006810 // transport /// 0005488 // binding /// 0015317 // phosphate:hydrogen symporter activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 96.422 57.685 y y y ruditapes_c979 -2.004 2.07E-03 57.703 28.796 y y y ruditapes_s39877 -6.671 2.08E-03 15.138 2.269 y y y ruditapes_lrc18057 -2.598 2.09E-03 35.08 13.502 y y y ruditapes_c26271 -5.604 2.10E-03 16.605 2.963 y y y ruditapes2_c980 -2.127 2.10E-03 50.338 23.661 y y y ruditapes_c14071 -3.407 2.10E-03 24.728 7.257 y y y ruditapes_c12232 -1.964 2.11E-03 60.317 30.705 y y y ruditapes_c1397 -6.793 2.11E-03 14.974 2.204 y y y ruditapes2_lrc4160 -4.908 2.11E-03 glutathione s-transferase /// 0005515 // protein binding 18.047 3.677 y y y ruditapes2_c1183 -3.029 2.11E-03 28.293 9.341 y y y ruditapes_c4703 -2.079 2.12E-03 52.798 25.391 y y y ruditapes_lrc28091 -7.076 2.12E-03 14.67 2.073 y y y ruditapes_c13323 -2.514 2.14E-03 36.814 14.644 y y y ruditapes_lrc32547 -7.728 2.14E-03 mitochondrial atp synthase lipid binding protein precursor "/// 0006811 // ion transport /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain" 14.095 1.824 y y y ruditapes_lrc16632 -2.528 2.15E-03 36.433 14.413 y y y ruditapes_c7914 -1.904 2.17E-03 64.909 34.095 y y y ruditapes_c18519 -2.584 2.17E-03 35.141 13.602 y y y ruditapes_lrc16406 -2.547 2.17E-03 35.944 14.114 y y y ruditapes2_c977 -1.848 2.17E-03 70.249 38.016 y y y ruditapes_lrc16392 -9.603 2.17E-03 12.965 1.35 y y y ruditapes2_lrc3808 -1.948 2.18E-03 61.166 31.405 y y y ruditapes_lrc17957 -2.368 2.19E-03 40.578 17.138 y y y ruditapes_c2533 -2.832 2.19E-03 30.68 10.835 y y y ruditapes_c19065 -2.143 2.19E-03 49.169 22.946 y y y ruditapes_c18872 -5.961 2.20E-03 15.883 2.665 y y y ruditapes_c20949 -2.392 2.20E-03 39.792 16.634 y y y ruditapes_c16888 -5.676 2.21E-03 16.316 2.874 y y y ruditapes2_c2069 -3.855 2.21E-03 21.676 5.624 y y y ruditapes_c8197 -1.965 2.21E-03 59.682 30.366 y y y ruditapes_c11754 -2.001 2.22E-03 57.107 28.534 y y y ruditapes_c17390 -3.06 2.22E-03 27.673 9.043 y y y ruditapes_c29615 -2.187 2.22E-03 47.004 21.491 y y y ruditapes2_c3065 -1.792 2.24E-03 76.253 42.56 y y y ruditapes2_c5684 2.448 2.27E-03 60s acidic ribosomal protein p1 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 15.12 37.013 y y y ruditapes_lrc39588 -2.097 2.28E-03 51.1 24.366 y y y ruditapes_c2045 -4.267 2.29E-03 aldehyde dehydrogenase 1a3 /// 0002072 // optic cup morphogenesis involved in camera-type eye development /// 0043065 // positive regulation of apoptosis /// 0042573 // retinoic acid metabolic process /// 0021768 // nucleus accumbens development /// 0048048 // embryonic eye morphogenesis /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity /// 0060166 // olfactory pit development 19.718 4.621 y y y ruditapes2_c1354 1.908 2.32E-03 32.117 61.268 y y y ruditapes_c15724 -3.924 2.33E-03 21.11 5.379 y y y ruditapes_c9592 -2.18 2.33E-03 46.866 21.494 y y y ruditapes_c18472 -1.782 2.33E-03 76.781 43.078 y y y ruditapes_c7469 -2.344 2.34E-03 40.757 17.39 y y y ruditapes_c28110 -2.921 2.34E-03 29.034 9.938 y y y ruditapes_lrc33959 -1.433 2.36E-03 nascent polypeptide-associated complex subunit alpha "/// 0006355 // regulation of transcription, DNA-dependent /// 0015031 // protein transport /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0003677 // DNA binding /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0017025 // TATA-binding protein binding /// 0044419 // interspecies interaction between organisms" 178.513 124.58 y n n ruditapes2_c2503 -2.55 2.37E-03 35.257 13.826 y y y ruditapes_c12048 -3.953 2.40E-03 20.851 5.274 y y y ruditapes_lrc32596 -3.835 2.40E-03 21.426 5.587 y y y ruditapes_lrc32391 -4.532 2.41E-03 ribosomal protein s11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 18.617 4.108 y y y ruditapes_c21776 -4.495 2.41E-03 18.732 4.167 y y y ruditapes_c27659 -3.317 2.42E-03 24.767 7.466 y y y ruditapes_c19198 -5.69 2.42E-03 16.002 2.812 y y y ruditapes2_c1175 -2.473 2.44E-03 36.844 14.901 y y y ruditapes2_c2741 -2.056 2.46E-03 52.562 25.563 y y y ruditapes_c23513 -2.001 2.47E-03 55.912 27.944 y y y ruditapes_c869 -12.072 2.48E-03 11.816 0.979 y y y ruditapes_lrc32549 -2.231 2.48E-03 ribosomal protein l26e 44.211 19.814 y y y ruditapes2_c1075 3.277 2.50E-03 b-cell translocation gene 1 7.476 24.497 y y y ruditapes_lrc34973 -4.269 2.50E-03 elongation factor 1-beta /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 19.364 4.536 y y y ruditapes_c6680 -2.141 2.51E-03 47.951 22.393 y y y ruditapes_c17214 -3.151 2.54E-03 26.01 8.254 y y y ruditapes_c9262 -2.701 2.56E-03 31.805 11.774 y y y ruditapes2_c717 -1.638 2.56E-03 99.112 60.502 y y y ruditapes2_c3647 -1.71 2.58E-03 ribosomal protein l13 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 85.568 50.043 y y y ruditapes_c11421 -1.963 2.60E-03 57.942 29.511 y y y ruditapes_c17925 -6.57 2.62E-03 14.578 2.219 y y y ruditapes2_c2982 -5.104 2.66E-03 16.795 3.291 y y y ruditapes_c19531 -4.337 2.66E-03 18.888 4.355 y y y ruditapes_c22715 -2.467 2.66E-03 36.332 14.724 y y y ruditapes_c20104 -3.753 2.67E-03 21.396 5.7 y y y ruditapes_c27599 -9.871 2.67E-03 12.332 1.249 y y y ruditapes_c20649 -1.935 2.69E-03 59.626 30.807 y y y ruditapes2_lrc4036 -1.394 2.69E-03 ubiquitin b /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005840 // ribosome /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0045941 // positive regulation of transcription 201.652 144.661 y n n ruditapes_c8364 -10.034 2.69E-03 12.254 1.221 y y y ruditapes_c18915 -2.965 2.70E-03 27.698 9.341 y y y ruditapes_lrc33492 -3.053 2.70E-03 ribosomal protein l5 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0042273 // ribosomal large subunit biogenesis 26.687 8.741 y y y ruditapes_c23928 -2.754 2.70E-03 30.58 11.103 y y y ruditapes_c26555 -16.011 2.73E-03 10.871 0.679 y y y ruditapes_c13109 -1.945 2.74E-03 58.633 30.141 y y y ruditapes2_c1167 -2.227 2.75E-03 43.455 19.511 y y y ruditapes2_c2193 -2.786 2.76E-03 29.97 10.757 y y y ruditapes_c26133 -5.05 2.76E-03 16.788 3.324 y y y ruditapes_c12263 -1.747 2.77E-03 78.76 45.07 y y y ruditapes_c27927 -9.266 2.77E-03 12.506 1.35 y y y ruditapes_c21513 -3.051 2.77E-03 26.574 8.71 y y y ruditapes_c4489 -3.049 2.79E-03 26.558 8.709 y y y ruditapes_lrc21190 -2.708 2.80E-03 31.129 11.497 y y y ruditapes2_c2720 -3.433 2.80E-03 23.17 6.749 y y y ruditapes_c28929 -2.503 2.81E-03 35.109 14.028 y y y ruditapes_c30050 -3.097 2.81E-03 26.012 8.398 y y y ruditapes_lrc33982 -1.452 2.81E-03 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 161.038 110.882 y n n ruditapes_c13923 -3.078 2.81E-03 26.198 8.511 y y y ruditapes_c2847 -14.331 2.82E-03 11.048 0.771 y y y ruditapes_c7007 -2.287 2.85E-03 41.003 17.927 y y y ruditapes_c15496 -2.601 2.85E-03 32.933 12.661 y y y ruditapes2_c964 -2.961 2.87E-03 27.393 9.252 y y y ruditapes2_c1289 -7.515 2.87E-03 13.447 1.789 y y y ruditapes2_lrc5112 -11.38 2.88E-03 11.646 1.023 y y y ruditapes2_lrc5699 -1.513 2.88E-03 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 132.452 87.541 y y y ruditapes_c9543 -4.742 2.89E-03 17.366 3.662 y y y ruditapes_c20472 -4.635 2.91E-03 17.633 3.805 y y y ruditapes_c27527 -3.374 2.92E-03 23.399 6.934 y y y ruditapes_lrc32626 -1.941 2.92E-03 prostaglandin d synthase-like 58.212 29.993 y y y ruditapes2_lrc6948 -1.436 2.92E-03 ribosomal protein l7a 168.9 117.59 y n n ruditapes_c11038 -2.599 2.95E-03 32.746 12.602 y y y ruditapes_c24505 -3.121 2.95E-03 25.517 8.177 y y y ruditapes_c3149 -2.328 2.96E-03 39.377 16.916 y y y ruditapes_c8534 -2.028 2.96E-03 52.255 25.768 y y y ruditapes_c2893 -2.406 2.97E-03 37.092 15.415 y y y ruditapes_lrc16588 -2.705 2.97E-03 30.773 11.374 y y y ruditapes2_c2818 -3.995 2.97E-03 19.773 4.95 y y y ruditapes_c5350 -1.883 2.98E-03 62.699 33.303 y y y ruditapes_c5045 -2.254 2.98E-03 41.778 18.537 y y y ruditapes_c7606 -1.8 2.99E-03 70.946 39.412 y y y ruditapes_c23310 -2.44 3.00E-03 36.136 14.808 y y y ruditapes_lrc34207 3.228 3.00E-03 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 7.431 23.989 y y y ruditapes2_lrc4914 -18.531 3.02E-03 10.373 0.56 y y y ruditapes_c22631 -2.061 3.03E-03 50.082 24.295 y y y ruditapes2_lrc4595 -1.751 3.04E-03 76.77 43.839 y y y ruditapes_c5380 -2.638 3.05E-03 31.776 12.045 y y y ruditapes2_c1755 -1.946 3.07E-03 57.263 29.429 y y y ruditapes_lrc35548 -2.02 3.08E-03 elongation factor 1 delta /// 0006412 // translation 52.283 25.88 y y y ruditapes_s40089 -20.014 3.08E-03 10.202 0.51 y y y ruditapes_lrc32178 4.874 3.09E-03 atp synthase beta "/// 0005524 // ATP binding /// 0005811 // lipid particle /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 3.406 16.603 y y y ruditapes_c37358 -2.48 3.09E-03 34.937 14.086 y y y ruditapes_c18682 -4.232 3.11E-03 18.661 4.409 y y y ruditapes_c24861 -4.753 3.11E-03 17.078 3.593 y y y ruditapes_c8034 -2.037 3.11E-03 51.16 25.113 y y y ruditapes_c5410 -2.509 3.12E-03 34.222 13.639 y y y ruditapes_c28759 -5.246 3.12E-03 15.965 3.043 y y y ruditapes_c23972 -7.466 3.12E-03 13.253 1.775 y y y ruditapes_lrc36506 -2.203 3.13E-03 43.236 19.623 y y y ruditapes_lrc19580 -1.717 3.13E-03 vdg3 [Mytilus edulis] 81.197 47.297 y y y ruditapes_c10950 -4.842 3.16E-03 16.796 3.469 y y y ruditapes2_c3031 -5.92 3.16E-03 14.814 2.502 y y y ruditapes_c30011 -6.115 3.17E-03 14.547 2.379 y y y ruditapes2_c2896 -2.71 3.17E-03 cathepsin l-associated protein /// 0005488 // binding /// 0009987 // cellular process /// 0044421 // extracellular region part 30.294 11.18 y y y ruditapes_c7836 -2.192 3.17E-03 43.537 19.861 y y y ruditapes_c4938 -1.717 3.18E-03 80.823 47.063 y y y ruditapes_c21868 -2.562 3.18E-03 32.952 12.862 y y y ruditapes_c6974 1.224 3.20E-03 360.518 441.298 y n n ruditapes_c27880 -3.622 3.21E-03 21.327 5.889 y y y ruditapes_lrc8408 -2.422 3.21E-03 36.083 14.897 y y y ruditapes2_c2647 -1.69 3.21E-03 84.939 50.247 y y y ruditapes2_lrc2144 -1.686 3.22E-03 histone h2a /// 0005694 // chromosome 85.606 50.768 y y y ruditapes_c18337 -2.032 3.22E-03 51.085 25.136 y y y ruditapes_c2295 -2.393 3.22E-03 ferritin /// 0055114 // oxidation reduction /// 0004322 // ferroxidase activity /// 0006826 // iron ion transport /// 0006879 // cellular iron ion homeostasis /// 0005737 // cytoplasm /// 0008199 // ferric iron binding 36.809 15.379 y y y ruditapes2_c2591 -7.619 3.22E-03 13.054 1.713 y y y ruditapes_c632 1.177 3.22E-03 ribosomal protein s29 /// 0048666 // neuron development /// 0006412 // translation /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 556.678 655.124 y n n ruditapes2_c146 -2.248 3.25E-03 41.211 18.329 y y y ruditapes_c12004 -8.241 3.26E-03 12.617 1.531 y y y ruditapes_c12326 -2.254 3.28E-03 40.926 18.153 y y y ruditapes_c25183 -9.615 3.29E-03 11.919 1.24 y y y ruditapes_c24922 -3.359 3.29E-03 22.93 6.826 y y y ruditapes2_lrc3497 -1.469 3.29E-03 alpha 3d /// 0000166 // nucleotide binding /// 0017111 // nucleoside-triphosphatase activity /// 0009987 // cellular process 147.391 100.326 y n n ruditapes_c28511 -3.296 3.30E-03 23.405 7.101 y y y ruditapes_c3234 -2.489 3.32E-03 34.224 13.753 y y y ruditapes_c4685 -3.203 3.33E-03 24.131 7.535 y y y ruditapes2_c2526 -3.24 3.35E-03 23.78 7.339 y y y ruditapes_c2993 -2.645 3.38E-03 30.983 11.714 y y y ruditapes_c20597 -2.259 3.41E-03 40.421 17.893 y y y ruditapes_lrc23533 -1.487 3.43E-03 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 137.909 92.713 y n n ruditapes2_c2206 -2.194 3.43E-03 42.751 19.484 y y y ruditapes_c25348 -2.559 3.48E-03 32.379 12.651 y y y ruditapes2_c1559 -1.554 3.49E-03 ependymin related protein-1 precursor 113.828 73.272 y y y ruditapes_c14049 -9.579 3.52E-03 11.757 1.227 y y y ruditapes_c7208 -2.014 3.54E-03 51.1 25.37 y y y ruditapes_s37628 -6.158 3.56E-03 14.136 2.296 y y y ruditapes_c2527 -2.56 3.57E-03 tandem repeat galectin /// 0005529 // sugar binding 32.203 12.579 y y y ruditapes_c2551 -6.478 3.57E-03 13.765 2.125 y y y ruditapes_c25898 -3.499 3.58E-03 21.566 6.163 y y y ruditapes_c23452 -9.237 3.59E-03 11.856 1.284 y y y ruditapes_lrc33424 -3.831 3.60E-03 ribosomal protein s11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 19.729 5.15 y y y ruditapes_c26766 -1.645 3.62E-03 90.848 55.216 y y y ruditapes_c25368 -3.16 3.62E-03 24.081 7.62 y y y ruditapes_c19759 -6.319 3.62E-03 13.897 2.199 y y y ruditapes_c12470 -3.426 3.63E-03 21.992 6.419 y y y ruditapes_c14427 -3.936 3.63E-03 19.214 4.882 y y y ruditapes_c27304 -2.653 3.64E-03 30.361 11.446 y y y ruditapes2_c281 -1.482 3.67E-03 myosin alkali light chain 1 /// 0003774 // motor activity /// 0016459 // myosin complex /// 0005509 // calcium ion binding 138.028 93.112 y n n ruditapes2_c163 -2.028 3.69E-03 49.841 24.571 y y y ruditapes_c16060 -2.342 3.71E-03 37.123 15.849 y y y ruditapes_c17824 -2.611 3.81E-03 30.789 11.793 y y y ruditapes_c3125 -5.952 3.82E-03 14.187 2.384 y y y ruditapes_lrc32142 -5.284 3.83E-03 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 15.213 2.879 y y y ruditapes_c934 -2.034 3.83E-03 49.153 24.171 y y y ruditapes_c15313 -2.129 3.84E-03 44.373 20.837 y y y ruditapes2_c1383 4.954 3.89E-03 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 3.155 15.631 y y y ruditapes2_lrc5091 -6.344 3.90E-03 nadh dehydrogenase 1 alpha subcomplex subunit 6 "/// 0003954 // NADH dehydrogenase activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0005747 // mitochondrial respiratory chain complex I" 13.651 2.152 y y y ruditapes_c22463 -3.089 3.92E-03 24.324 7.875 y y y ruditapes_c28149 -2.559 3.92E-03 31.575 12.34 y y y ruditapes_c24135 -7.922 3.92E-03 12.315 1.555 y y y ruditapes_c11978 -4.897 3.93E-03 15.909 3.249 y y y ruditapes_c10753 -3.555 3.93E-03 20.802 5.851 y y y ruditapes_c25243 -2.514 3.94E-03 32.443 12.903 y y y ruditapes_c11586 -3.515 3.95E-03 21.013 5.978 y y y ruditapes_c1049 -2.152 3.96E-03 43.127 20.04 y y y ruditapes_c2478 -2.339 3.96E-03 36.685 15.684 y y y ruditapes_c17563 -2.359 3.96E-03 36.13 15.317 y y y ruditapes_c11307 -3.248 3.97E-03 22.857 7.036 y y y ruditapes_c8724 -3.661 3.98E-03 20.147 5.504 y y y ruditapes_c25004 -3.654 3.98E-03 20.181 5.523 y y y ruditapes_c1436 -3.331 3.98E-03 aldehyde dehydrogenase 1a1 "/// 0016620 // oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor /// 0008152 // metabolic process /// 0044424 // intracellular part" 22.213 6.669 y y y ruditapes_lrc38716 -1.854 3.99E-03 60s ribosomal protein l7a /// 0030529 // ribonucleoprotein complex 61.433 33.14 y y y ruditapes_c4775 -2.171 3.99E-03 42.264 19.463 y y y ruditapes2_lrc4859 -2.207 4.01E-03 isoform b 40.849 18.507 y y y ruditapes_s36218 -5.166 4.01E-03 15.28 2.958 y y y ruditapes2_c691 -2.764 4.02E-03 27.979 10.122 y y y ruditapes_c10543 -3.46 4.06E-03 21.239 6.138 y y y ruditapes2_c2031 -3.91 4.06E-03 peroxiredoxin 6 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0045454 // cell redox homeostasis /// 0016491 // oxidoreductase activity /// 0016787 // hydrolase activity /// 0016209 // antioxidant activity /// 0016042 // lipid catabolic process 18.86 4.824 y y y ruditapes_c27260 -2.166 4.07E-03 42.279 19.517 y y y ruditapes2_lrc5490 -17.448 4.08E-03 9.829 0.563 y y y ruditapes_c9750 -4.448 4.10E-03 16.904 3.801 y y y ruditapes_c25677 -12.172 4.10E-03 10.608 0.871 y y y ruditapes_c24011 -3.582 4.12E-03 20.434 5.705 y y y ruditapes2_c2973 -7.299 4.13E-03 12.603 1.727 y y y ruditapes_c10273 -2.253 4.15E-03 38.94 17.284 y y y ruditapes_lrc15856 -4.683 4.16E-03 16.214 3.462 y y y ruditapes_lrc22713 -2.931 4.16E-03 25.642 8.749 y y y ruditapes_c7062 -2.036 4.17E-03 48.115 23.63 y y y ruditapes_c8223 -3.702 4.17E-03 19.729 5.329 y y y ruditapes_c93 1.583 4.17E-03 wnt1-inducible-signaling pathway protein 1 precursor (wisp-1) (wnt-1-induced secreted protein) 60.716 96.088 y y y ruditapes_lrc27133 -2.718 4.17E-03 28.427 10.457 y y y ruditapes2_c1575 -2.741 4.18E-03 28.08 10.245 y y y ruditapes_c486 -2.002 4.18E-03 eukaryotic translation initiation factor 5a /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity 50.006 24.979 y y y ruditapes_c37744 -4.043 4.20E-03 beta-tubulin 18.176 4.495 y y y ruditapes_c8729 -4.312 4.20E-03 17.225 3.995 y y y ruditapes_c11656 -3.924 4.22E-03 18.643 4.751 y y y ruditapes_c20660 -3.278 4.22E-03 22.327 6.812 y y y ruditapes_c12834 -2.574 4.23E-03 30.78 11.96 y y y ruditapes_c7126 -1.896 4.27E-03 56.945 30.028 y y y ruditapes_c16773 -2.104 4.27E-03 44.478 21.136 y y y ruditapes2_c3112 -1.622 4.28E-03 mitochondrial atp synthase alpha subunit "/// 0005524 // ATP binding /// 0005759 // mitochondrial matrix /// 0043499 // eukaryotic cell surface binding /// 0005811 // lipid particle /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0006911 // phagocytosis, engulfment /// 0008340 // determination of adult lifespan /// 0007286 // spermatid development /// 0001937 // negative regulation of endothelial cell proliferation /// 0042288 // MHC class I protein binding /// 0009792 // embryonic development ending in birth or egg hatching /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 92.102 56.772 y y y ruditapes_c7300 -1.796 4.30E-03 66.064 36.789 y y y ruditapes_c16001 -2.605 4.31E-03 30.076 11.546 y y y ruditapes_c29398 -19.041 4.34E-03 9.553 0.502 y y y ruditapes_c30022 -2.471 4.35E-03 32.662 13.217 y y y ruditapes_lrc38547 2.05 4.35E-03 22.129 45.354 y y y ruditapes_c10486 -2.666 4.35E-03 28.984 10.872 y y y ruditapes_c3980 -2.102 4.40E-03 44.275 21.062 y y y ruditapes_c26849 -2.941 4.40E-03 25.218 8.576 y y y ruditapes_c30857 -3.017 4.43E-03 24.376 8.08 y y y ruditapes2_c1992 -2.073 4.45E-03 45.555 21.978 y y y ruditapes_c7985 -1.909 4.45E-03 55.465 29.057 y y y ruditapes_s39352 -2.183 4.54E-03 60s ribosomal protein l9 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 40.639 18.618 y y y ruditapes_c30149 -2.148 4.54E-03 42.014 19.562 y y y ruditapes2_c1271 -2.321 4.57E-03 36.048 15.532 y y y ruditapes_lrc33670 -1.816 4.58E-03 ribosomal protein l10a /// 0006414 // translational elongation /// 0006396 // RNA processing /// 0005840 // ribosome /// 0005829 // cytosol /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009653 // anatomical structure morphogenesis 63.101 34.752 y y y ruditapes_c26813 -17.79 4.58E-03 9.545 0.537 y y y ruditapes2_lrc4529 -1.908 4.62E-03 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0044238 // primary metabolic process /// 0022625 // cytosolic large ribosomal subunit /// 0010467 // gene expression /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome /// 0034960 // cellular biopolymer metabolic process 55.035 28.837 y y y ruditapes_c7060 -1.296 4.65E-03 ribosomal protein l22 /// 0005622 // intracellular 287.203 221.672 y n n ruditapes_c5515 -4.209 4.66E-03 17.163 4.077 y y y ruditapes_c1403 -3.082 4.68E-03 23.442 7.606 y y y ruditapes_c9866 -2.904 4.71E-03 25.257 8.699 y y y ruditapes_c29573 -2.734 4.72E-03 27.422 10.03 y y y ruditapes_c14057 -6.949 4.72E-03 12.512 1.801 y y y ruditapes_c23304 -2.054 4.77E-03 45.764 22.278 y y y ruditapes_c14366 -4.113 4.77E-03 17.407 4.232 y y y ruditapes2_c3341 -1.682 4.77E-03 79.246 47.12 y y y ruditapes2_lrc4130 -2.468 4.80E-03 mitochondrial atp synthase lipid binding protein precursor "/// 0006811 // ion transport /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain" 32.024 12.978 y y y ruditapes2_c348 -2.389 4.80E-03 33.835 14.162 y y y ruditapes_c16976 -2.306 4.81E-03 36.055 15.637 y y y ruditapes2_lrc4649 -2.366 4.82E-03 34.395 14.539 y y y ruditapes2_c183 -3.916 4.83E-03 calreticulin /// 0005783 // endoplasmic reticulum /// 0005509 // calcium ion binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 18.116 4.627 y y y ruditapes_c15053 -3.168 4.87E-03 22.487 7.099 y y y ruditapes2_lrc4180 -2.963 4.87E-03 24.41 8.24 y y y ruditapes_c11202 -6.177 4.87E-03 13.17 2.132 y y y ruditapes_c4441 -2.041 4.89E-03 46.177 22.626 y y y ruditapes_c26748 -2.598 4.89E-03 29.346 11.294 y y y ruditapes_c9273 -2.865 4.92E-03 25.448 8.883 y y y ruditapes_lrc23796 -6.878 4.94E-03 12.441 1.809 y y y ruditapes_c11053 -2.806 4.95E-03 26.145 9.317 y y y ruditapes2_c2921 -2.086 4.99E-03 43.795 21 y y y ruditapes_lrc38640 -2.114 5.00E-03 ependymin related protein-1 precursor 42.492 20.1 y y y ruditapes_lrc32566 -2.36 5.02E-03 34.23 14.503 y y y ruditapes_c6682 -5.416 5.02E-03 predicted protein [Nematostella vectensis] 14.102 2.604 y y y ruditapes_c21953 -3.048 5.02E-03 23.392 7.675 y y y ruditapes2_c15 -4.528 5.03E-03 15.925 3.517 y y y ruditapes_c27347 -2.481 5.03E-03 31.391 12.654 y y y ruditapes_c6687 -4.022 5.04E-03 17.526 4.358 y y y ruditapes_c7486 -2.064 5.04E-03 44.683 21.644 y y y ruditapes2_c1411 -1.838 5.06E-03 59.612 32.434 y y y ruditapes2_lrc4303 6.901 5.08E-03 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 1.774 12.244 y y y ruditapes_c30931 -3.062 5.08E-03 23.197 7.576 y y y ruditapes_c13327 -2.198 5.09E-03 39.027 17.753 y y y ruditapes_c4500 -2.614 5.11E-03 28.773 11.006 y y y ruditapes_c20489 -4.18 5.12E-03 16.9 4.043 y y y ruditapes2_lrc3903 -3.175 5.16E-03 22.132 6.971 y y y ruditapes_lrc34813 -2.585 5.16E-03 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 29.207 11.298 y y y ruditapes_lrc27046 -1.966 5.17E-03 49.801 25.337 y y y ruditapes2_c24 -1.507 5.19E-03 tropomyosin 118.553 78.659 y y y ruditapes2_lrc4864 -2.826 5.28E-03 25.509 9.026 y y y ruditapes_lrc32456 3.566 5.29E-03 ribosomal protein l9 /// 0030529 // ribonucleoprotein complex 5.35 19.077 y y y ruditapes_c21936 -7.243 5.32E-03 11.945 1.649 y y y ruditapes2_c1773 -1.873 5.34E-03 55.895 29.839 y y y ruditapes_lrc15955 -3.554 5.35E-03 19.413 5.463 y y y ruditapes_c14582 -1.932 5.35E-03 51.57 26.693 y y y ruditapes2_c4916 4.614 5.37E-03 large subunit ribosomal protein 30 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.312 15.28 y y y ruditapes_c2844 -4.208 5.37E-03 16.62 3.95 y y y ruditapes_lrc32511 -3.6 5.37E-03 atp synthase subunit b 19.143 5.318 y y y ruditapes_c32050 -3.957 5.37E-03 17.513 4.426 y y y ruditapes_c18458 -7.581 5.40E-03 11.669 1.539 y y y ruditapes_c7614 -4.971 5.41E-03 14.646 2.947 y y y ruditapes_c16964 -3.062 5.42E-03 22.847 7.461 y y y ruditapes_c5527 -2.735 5.46E-03 26.501 9.689 y y y ruditapes_lrc35087 -1.91 5.48E-03 52.806 27.647 y y y ruditapes_c12722 -3.415 5.49E-03 20.111 5.889 y y y ruditapes_c533 -7.236 5.53E-03 11.842 1.637 y y y ruditapes_c9844 -2.274 5.54E-03 35.841 15.765 y y y ruditapes_c31588 -2.656 5.54E-03 27.572 10.381 y y y ruditapes2_c1455 -2.551 5.55E-03 29.327 11.497 y y y ruditapes_c17465 -1.832 5.58E-03 58.773 32.073 y y y ruditapes_c13884 -3.679 5.60E-03 l _3 18.557 5.044 y y y ruditapes_c11303 -2.444 5.60E-03 31.385 12.84 y y y ruditapes_c9694 -2.068 5.62E-03 43.408 20.994 y y y ruditapes_c13375 -2.356 5.63E-03 33.434 14.191 y y y ruditapes_c8280 -4.112 5.64E-03 16.746 4.073 y y y ruditapes_lrc12330 -2.537 5.66E-03 29.455 11.611 y y y ruditapes_c10508 -2.214 5.68E-03 37.501 16.935 y y y ruditapes_c28647 -2.379 5.70E-03 32.766 13.774 y y y ruditapes_c16003 -3.64 5.75E-03 18.637 5.12 y y y ruditapes_c27671 -5.52 5.77E-03 13.496 2.445 y y y ruditapes_c10628 -1.912 5.78E-03 52.019 27.211 y y y ruditapes_c27715 -3.728 5.80E-03 18.166 4.873 y y y ruditapes_c5032 -3.563 5.84E-03 18.964 5.323 y y y ruditapes_c166 -1.427 5.85E-03 isocitrate dehydrogenase 2 (nadp+) mitochondrial /// 0055114 // oxidation reduction /// 0030145 // manganese ion binding /// 0006099 // tricarboxylic acid cycle /// 0004450 // isocitrate dehydrogenase (NADP+) activity /// 0005743 // mitochondrial inner membrane /// 0006097 // glyoxylate cycle /// 0000287 // magnesium ion binding /// 0006102 // isocitrate metabolic process 150.048 105.178 y n n ruditapes_c7773 -1.703 5.86E-03 72.516 42.59 y y y ruditapes_c19509 -2.511 5.87E-03 29.696 11.828 y y y ruditapes_c28442 -2.524 5.87E-03 chaperonin containing subunit 4 /// 0005524 // ATP binding /// 0005811 // lipid particle /// 0042470 // melanosome /// 0051082 // unfolded protein binding /// 0006457 // protein folding 29.432 11.66 y y y ruditapes2_c1324 -2.018 5.88E-03 45.384 22.486 y y y ruditapes_c889 -2.176 5.91E-03 38.455 17.669 y y y ruditapes_c10684 -4.843 5.95E-03 14.58 3.01 y y y ruditapes_c24616 -1.651 5.99E-03 80.105 48.523 y y y ruditapes_c3867 -2.809 5.99E-03 24.963 8.886 y y y ruditapes_lrc24078 -1.542 6.02E-03 103.794 67.314 y y y ruditapes_c10286 -1.907 6.11E-03 51.674 27.097 y y y ruditapes_c17623 -14.973 6.12E-03 9.222 0.616 y y y ruditapes_lrc27187 -4.641 6.13E-03 14.926 3.216 y y y ruditapes_lrc15898 -6.704 6.13E-03 11.973 1.786 y y y ruditapes_c10604 -2.425 6.19E-03 31.07 12.812 y y y ruditapes2_c2447 -3.248 6.22E-03 20.631 6.352 y y y ruditapes_c29165 -1.665 6.25E-03 76.954 46.216 y y y ruditapes_c12289 -2.503 6.26E-03 29.383 11.738 y y y ruditapes_c30350 -2.729 6.26E-03 25.739 9.433 y y y ruditapes_c1771 -4.477 6.29E-03 15.239 3.404 y y y ruditapes_c10782 -3.716 6.33E-03 17.849 4.803 y y y ruditapes_c641 -2.143 6.33E-03 39.04 18.215 y y y ruditapes_lrc22128 -2.72 6.36E-03 25.769 9.475 y y y ruditapes_c14626 -3.118 6.40E-03 21.487 6.891 y y y ruditapes_c11857 -3.365 6.45E-03 19.656 5.841 y y y ruditapes2_c1391 -1.877 6.46E-03 ubiquinol-cytochrome c reductase core protein ii 53.104 28.285 y y y ruditapes2_c2471 -2.193 6.49E-03 37.026 16.884 y y y ruditapes2_lrc1741 -7.21 6.53E-03 11.399 1.581 y y y ruditapes_c25011 -3.879 6.55E-03 17.009 4.385 y y y ruditapes2_lrc4116 -1.54 6.57E-03 ribosomal protein s14e /// 0005811 // lipid particle /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 102.164 66.338 y y y ruditapes2_c185 -1.6 6.66E-03 arginine kinase 87.487 54.681 y y y ruditapes2_c2759 -2.453 6.67E-03 29.917 12.196 y y y ruditapes2_c250 -1.302 6.69E-03 ribosomal protein l39 /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 254.451 195.438 y n n ruditapes_s37361 -2.379 6.73E-03 31.467 13.226 y y y ruditapes_c27155 -3.485 6.76E-03 18.729 5.374 y y y ruditapes_c8518 -4.386 6.77E-03 glucosidase 2 subunit beta 15.212 3.468 y y y ruditapes_c12763 -3.211 6.85E-03 hypothetical protein BRAFLDRAFT_118696 [Branchiostoma floridae] 20.417 6.359 y y y ruditapes_c19106 -4.139 6.85E-03 15.894 3.84 y y y ruditapes_c25947 -7.666 6.86E-03 10.969 1.431 y y y ruditapes_c10232 -2.307 6.87E-03 33.109 14.352 y y y ruditapes_c12461 -1.906 6.88E-03 50.278 26.382 y y y ruditapes_c227 -5.945 6.91E-03 12.38 2.083 y y y ruditapes_c9514 -3.64 6.91E-03 17.823 4.896 y y y ruditapes_c734 -1.876 6.93E-03 52.285 27.864 y y y ruditapes_c14013 -4.954 6.94E-03 13.831 2.792 y y y ruditapes2_lrc4214 -2.315 6.96E-03 atp binding 32.798 14.168 y y y ruditapes_c22280 -5.541 7.02E-03 12.842 2.318 y y y ruditapes_c18101 -2.888 7.02E-03 23.145 8.015 y y y ruditapes_lrc31394 -5.169 7.02E-03 13.407 2.594 y y y ruditapes_c28645 -8.076 7.04E-03 conserved plasmodium protein 10.67 1.321 y y y ruditapes_c21527 -1.624 7.04E-03 81.726 50.335 y y y ruditapes_c27394 -4.301 7.08E-03 15.278 3.552 y y y ruditapes_c6039 -2.855 7.12E-03 23.418 8.203 y y y ruditapes_c9560 -1.758 7.18E-03 62.427 35.514 y y y ruditapes2_c1037 -2.282 7.18E-03 33.429 14.651 y y y ruditapes_lrc32105 -12.296 7.19E-03 glutathione s-transferase /// 0005515 // protein binding 9.279 0.755 y y y ruditapes_c2831 -2.986 7.19E-03 22.025 7.376 y y y ruditapes_c4923 -1.728 7.21E-03 65.707 38.017 y y y ruditapes2_lrc5345 -1.795 7.29E-03 40s ribosomal protein s10 /// 0005840 // ribosome 58.383 32.516 y y y ruditapes_c22462 -24.709 7.30E-03 8.142 0.33 y y y ruditapes_c16367 -7.975 7.35E-03 10.608 1.33 y y y ruditapes_c9432 -1.914 7.36E-03 48.918 25.562 y y y ruditapes_c31313 -4.112 7.41E-03 15.676 3.812 y y y ruditapes_c12583 -2.163 7.42E-03 36.847 17.034 y y y ruditapes_c19195 -4.752 7.43E-03 13.997 2.946 y y y ruditapes_c7977 -2.455 7.45E-03 29.072 11.842 y y y ruditapes_c29720 -2.577 7.46E-03 26.867 10.425 y y y ruditapes_c18106 -4.496 7.54E-03 14.528 3.231 y y y ruditapes_lrc33598 -1.584 7.56E-03 88.195 55.693 y y y ruditapes_c4395 -3.875 7.57E-03 16.423 4.238 y y y ruditapes_c8038 -1.636 7.57E-03 78.065 47.713 y y y ruditapes2_c1664 -1.914 7.58E-03 48.533 25.354 y y y ruditapes_c7885 -2.288 7.59E-03 32.818 14.347 y y y ruditapes_c19162 -3.198 7.59E-03 19.995 6.252 y y y ruditapes_c5049 -1.893 7.60E-03 49.901 26.356 y y y ruditapes_c8498 -3.461 7.63E-03 18.306 5.289 y y y ruditapes_c26758 -2.972 7.67E-03 21.804 7.336 y y y ruditapes2_c2970 -2.252 7.69E-03 33.7 14.967 y y y ruditapes2_lrc5368 -3.858 7.70E-03 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 16.422 4.257 y y y ruditapes2_c3457 -1.539 7.77E-03 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 98.19 63.787 y y y ruditapes_c14555 -3.684 7.85E-03 17.062 4.631 y y y ruditapes_c10000 -2.374 7.86E-03 30.403 12.808 y y y ruditapes_c11449 -16.308 7.87E-03 8.522 0.523 y y y ruditapes_c20755 -2.619 7.89E-03 25.839 9.866 y y y ruditapes_c11512 -4.73 7.93E-03 13.814 2.921 y y y ruditapes_c10317 -3.787 7.94E-03 16.574 4.376 y y y ruditapes_c5189 -2.129 7.96E-03 37.404 17.565 y y y ruditapes2_c3146 1.194 7.96E-03 nadh dehydrogenase subunit 4l 381.792 455.765 y n n ruditapes_c1863 -5.997 8.00E-03 11.876 1.98 y y y ruditapes2_lrc5470 -2.667 8.04E-03 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 25.019 9.382 y y y ruditapes_c21969 -3.182 8.05E-03 19.814 6.228 y y y ruditapes2_c2492 -10.547 8.11E-03 9.39 0.89 y y y ruditapes_c28613 -2.065 8.17E-03 39.703 19.223 y y y ruditapes2_lrc3132 -2.284 8.19E-03 32.293 14.141 y y y ruditapes_c5431 -3.298 8.21E-03 18.926 5.739 y y y ruditapes2_lrc5631 2.114 8.21E-03 40s ribosomal protein s10 /// 0005840 // ribosome 17.248 36.46 y y y ruditapes_lrc8014 -1.588 8.23E-03 85.328 53.719 y y y ruditapes2_lrc5557 1.867 8.23E-03 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 26.113 48.747 y y y ruditapes_c12030 -3.365 8.23E-03 18.503 5.499 y y y ruditapes_c24715 -11.119 8.23E-03 9.211 0.828 y y y ruditapes_c18937 -3.504 8.24E-03 17.72 5.056 y y y ruditapes_c3455 -3.03 8.24E-03 20.899 6.898 y y y ruditapes_c18124 -2.508 8.25E-03 27.357 10.91 y y y ruditapes_c17088 -10.203 8.27E-03 9.436 0.925 y y y ruditapes_c17995 -1.976 8.28E-03 43.853 22.194 y y y ruditapes_c31094 3.019 8.31E-03 6.796 20.52 y y y ruditapes2_lrc4896 1.421 8.33E-03 ribosomal protein s14 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 91.549 130.101 y n n ruditapes_c5430 -2.57 8.34E-03 26.237 10.211 y y y ruditapes_c2871 -1.805 8.36E-03 55.51 30.749 y y y ruditapes_c13514 -4.043 8.37E-03 15.417 3.813 y y y ruditapes2_c5501 9.607 8.37E-03 60s acidic ribosomal protein p1 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 0.993 9.536 y y y ruditapes_lrc33987 -4.554 8.39E-03 alpha 3 type vi collagen isoform 1 precursor 14.001 3.074 y y y ruditapes_c27245 -1.547 8.40E-03 94.319 60.973 y y y ruditapes_lrc25434 -4.267 8.41E-03 14.718 3.449 y y y ruditapes_c19503 -2.106 8.44E-03 37.726 17.913 y y y ruditapes_lrc6820 5.057 8.44E-03 2.539 12.839 y y y ruditapes_c10410 -6.01 8.46E-03 11.692 1.945 y y y ruditapes_c30493 -2.343 8.48E-03 30.525 13.029 y y y ruditapes_lrc35096 2.426 8.49E-03 apextrin 11.512 27.933 y y y ruditapes_c4107 -3.783 8.49E-03 16.31 4.311 y y y ruditapes_c6002 1.18 8.49E-03 431.562 509.103 y n n ruditapes_c26063 -5.667 8.50E-03 12.07 2.13 y y y ruditapes_c5912 -8.427 8.51E-03 10.004 1.187 y y y ruditapes_c1809 -2.923 8.55E-03 21.672 7.415 y y y ruditapes_lrc24455 -9.549 8.56E-03 9.555 1.001 y y y ruditapes2_lrc4032 -1.992 8.60E-03 42.59 21.382 y y y ruditapes_c15088 -7.513 8.61E-03 10.444 1.39 y y y ruditapes_c17102 -6.236 8.64E-03 11.399 1.828 y y y ruditapes2_c1275 -2.1 8.66E-03 37.692 17.945 y y y ruditapes_c3228 -2.395 8.69E-03 29.163 12.175 y y y ruditapes_c21937 -4.613 8.70E-03 13.739 2.978 y y y ruditapes_c3630 -3.241 8.70E-03 19.016 5.868 y y y ruditapes_c19639 -2.325 8.72E-03 30.722 13.212 y y y ruditapes_c23958 -2.553 8.75E-03 26.181 10.255 y y y ruditapes_c145 -1.483 8.76E-03 112.271 75.719 y n n ruditapes_c18302 -7.095 8.84E-03 10.64 1.5 y y y ruditapes_c12094 -2.167 8.84E-03 35.091 16.192 y y y ruditapes_c36510 -2.142 8.92E-03 35.876 16.751 y y y ruditapes_c23257 -4.326 8.94E-03 14.331 3.313 y y y ruditapes_c27429 -3.878 8.97E-03 15.714 4.052 y y y ruditapes_lrc36466 -14.651 9.02E-03 8.406 0.574 y y y ruditapes_c31738 3.39 9.03E-03 5.193 17.605 y y y ruditapes2_c614 -1.819 9.05E-03 53.193 29.238 y y y ruditapes2_c3024 -2.308 9.06E-03 30.842 13.364 y y y ruditapes_c24808 -1.633 9.08E-03 75.043 45.958 y y y ruditapes2_c1078 -1.785 9.09E-03 56.098 31.42 y y y ruditapes_c17846 -1.792 9.09E-03 55.535 30.999 y y y ruditapes_c28477 -6.737 9.09E-03 10.822 1.606 y y y ruditapes_c16705 -3.561 9.10E-03 16.987 4.77 y y y ruditapes2_lrc4960 -2.621 9.11E-03 24.869 9.489 y y y ruditapes_c20956 -3.389 9.11E-03 17.881 5.276 y y y ruditapes_c15766 -3.521 9.11E-03 17.177 4.878 y y y ruditapes_c1831 -2.469 9.12E-03 27.352 11.08 y y y ruditapes_c5837 -1.656 9.12E-03 71.338 43.081 y y y ruditapes2_c1200 -2.341 9.14E-03 29.981 12.808 y y y ruditapes_c9628 -10.995 9.18E-03 orf2-encoded protein 8.982 0.817 y y y ruditapes_lrc34345 -3.326 9.19E-03 tubulin polymerization-promoting protein family member 3 /// 0002119 // nematode larval development /// 0005730 // nucleolus /// 0000003 // reproduction /// 0005737 // cytoplasm 18.211 5.476 y y y ruditapes_lrc35016 -2.419 9.20E-03 28.245 11.676 y y y ruditapes_c17611 -2.342 9.22E-03 29.879 12.756 y y y ruditapes_c11127 -2.158 9.24E-03 35.007 16.225 y y y ruditapes2_c3369 -1.699 9.26E-03 arginine kinase /// 0016740 // transferase activity 65.103 38.311 y y y ruditapes_c6236 -4.031 9.32E-03 15.03 3.728 y y y ruditapes2_c2285 -3.672 9.33E-03 16.371 4.458 y y y ruditapes_c9399 -2.172 9.33E-03 34.438 15.855 y y y ruditapes_s38256 -17.568 9.36E-03 8.036 0.457 y y y ruditapes_c30198 -4.619 9.41E-03 13.448 2.912 y y y ruditapes_lrc32929 4.047 9.45E-03 3.636 14.714 y y y ruditapes_lrc15549 -6.365 9.47E-03 11.014 1.731 y y y ruditapes_c18392 -2.536 9.48E-03 25.904 10.215 y y y ruditapes_lrc39310 1.719 9.51E-03 atp:adp antiporter /// 0044464 // cell part 34.559 59.4 y y y ruditapes2_c819 -3.675 9.51E-03 16.278 4.43 y y y ruditapes_c670 -4.425 9.51E-03 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 13.85 3.13 y y y ruditapes2_c3321 5.958 9.52E-03 AF339450_1hillarin [Hirudo medicinalis] 1.894 11.284 y y y ruditapes_c25841 -2.995 9.53E-03 20.412 6.815 y y y ruditapes_c301 -1.44 9.55E-03 126.344 87.725 y n n ruditapes_s37791 -9.475 9.57E-03 9.303 0.982 y y y ruditapes_lrc26866 -2.861 9.59E-03 21.634 7.562 y y y ruditapes_c7784 -2.055 9.61E-03 38.501 18.738 y y y ruditapes_c4912 -5.689 9.62E-03 11.659 2.049 y y y ruditapes_c32846 -5.329 9.66E-03 beta-ig-h3 fasciclin 12.116 2.274 y y y ruditapes_c29896 -1.809 9.67E-03 53.121 29.364 y y y ruditapes_lrc23579 -2 9.69E-03 40.881 20.441 y y y ruditapes_lrc34778 -2.573 9.70E-03 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 25.164 9.78 y y y ruditapes2_c6594 -2.088 9.70E-03 37.065 17.754 y y y ruditapes_c7895 -4.914 9.71E-03 coiled-coil domain containing 86 12.76 2.596 y y y ruditapes2_c1879 -3.086 9.74E-03 c030046i01rik protein 19.55 6.335 y y y ruditapes_c19609 -3.29 9.76E-03 18.136 5.512 y y y ruditapes2_lrc2758 -3.834 9.76E-03 15.527 4.05 y y y ruditapes_c31456 -2.512 9.80E-03 26.082 10.385 y y y ruditapes_c18593 -2.368 9.81E-03 28.82 12.169 y y y ruditapes2_c1088 -2.382 9.84E-03 28.492 11.96 y y y ruditapes_c10251 -2.041 9.86E-03 mgc79762 protein 38.818 19.018 y y y ruditapes_lrc34364 -1.771 9.87E-03 56.251 31.768 y y y ruditapes_c17297 -3.951 9.90E-03 15.053 3.81 y y y ruditapes2_c2626 -2.24 9.95E-03 31.845 14.218 y y y ruditapes_c12556 -2.687 9.97E-03 23.389 8.705 y y y ruditapes_lrc13111 -2.452 1.00E-02 26.99 11.006 y y y ruditapes_c180 -1.406 0.01 140.835 100.173 y n n ruditapes_c2100 -1.478 0.01 109.844 74.329 y n n ruditapes2_c903 -1.606 0.01 77.229 48.079 y y y ruditapes2_c2186 -1.613 0.01 76.111 47.189 y y y ruditapes2_c3605 -1.871 0.01 selenophosphate synthetase isoform 1 47.949 25.631 y y y ruditapes2_c1831 -1.873 0.01 47.624 25.43 y y y ruditapes2_c381 -1.921 0.01 44.412 23.117 y y y ruditapes_c18827 -2.043 0.01 38.351 18.775 y y y ruditapes_lrc16212 -2.143 0.01 34.46 16.079 y y y ruditapes_c23540 -2.187 0.01 32.931 15.059 y y y ruditapes_c33192 -2.434 0.01 26.981 11.084 y y y ruditapes_c7531 -2.621 0.01 rgm domain member b 24.245 9.251 y y y ruditapes_c14059 -2.698 0.01 23.146 8.579 y y y ruditapes_c7856 -2.763 0.01 22.361 8.092 y y y ruditapes2_c1285 -2.874 0.01 21.182 7.37 y y y ruditapes_c6724 -3.208 0.01 18.365 5.725 y y y ruditapes_c29227 -7.184 0.01 10.194 1.419 y y y ruditapes_lrc10861 -8.019 0.01 9.71 1.211 y y y ruditapes_c26834 -8.319 0.01 9.517 1.144 y y y ruditapes_c15109 -19.003 0.01 7.703 0.405 y y y ruditapes_lrc16398 -19.458 0.01 7.759 0.399 y y y ruditapes_c870 -1.559 0.011 84.738 54.355 y y y ruditapes_c2959 -1.649 0.011 glutathione peroxidase 3 /// 0005615 // extracellular space /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0008134 // transcription factor binding /// 0006982 // response to lipid hydroperoxide /// 0004602 // glutathione peroxidase activity /// 0051289 // protein homotetramerization 68.557 41.585 y y y ruditapes_c7009 -1.804 0.011 52.189 28.93 y y y ruditapes_c5162 -1.85 0.011 47.733 25.807 y y y ruditapes2_c1364 -1.914 0.011 44.151 23.067 y y y ruditapes_c17596 -1.997 0.011 39.809 19.934 y y y ruditapes_c23024 -1.996 0.011 39.673 19.879 y y y ruditapes_c22255 -2.028 0.011 38.587 19.023 y y y ruditapes2_c4095 -2.024 0.011 38.225 18.888 y y y ruditapes_c18558 -2.132 0.011 33.857 15.883 y y y ruditapes_c1673 -2.305 0.011 29.649 12.862 y y y ruditapes_c12517 -2.352 0.011 28.429 12.088 y y y ruditapes_c25409 -2.374 0.011 28.147 11.856 y y y ruditapes_c11435 -2.363 0.011 27.987 11.842 y y y ruditapes_c9435 -2.461 0.011 hairy and enhancer of split /// 0048667 // cell morphogenesis involved in neuron differentiation /// 0021983 // pituitary gland development /// 0042668 // auditory receptor cell fate determination /// 0008284 // positive regulation of cell proliferation /// 0005634 // nucleus /// 0001701 // in utero embryonic development /// 0021575 // hindbrain morphogenesis /// 0045608 // negative regulation of auditory receptor cell differentiation /// 0046982 // protein heterodimerization activity /// 0050768 // negative regulation of neurogenesis /// 0001889 // liver development /// 0003677 // DNA binding /// 0010552 // positive regulation of specific transcription from RNA polymerase II promoter /// 0021557 // oculomotor nerve development /// 0005737 // cytoplasm /// 0030324 // lung development /// 0016564 // transcription repressor activity /// 0021558 // trochlear nerve development /// 0060164 // regulation of timing of neuron differentiation /// 0048469 // cell maturation /// 0007155 // cell adhesion /// 0007219 // Notch signaling pathway /// 0010553 // negative regulation of specific transcription from RNA polymerase II promoter /// 0021555 // midbrain-hindbrain boundary morphogenesis /// 0030901 // midbrain development /// 0048635 // negative regulation of muscle development 26.443 10.745 y y y ruditapes2_c1251 -2.496 0.011 25.446 10.196 y y y ruditapes_c31252 -2.568 0.011 24.572 9.569 y y y ruditapes_c305 -2.596 0.011 dynein light chain roadblock-type 2 /// 0005868 // cytoplasmic dynein complex /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 24.074 9.273 y y y ruditapes_c31653 -2.586 0.011 23.885 9.235 y y y ruditapes_lrc33015 8.619 0.011 ribosomal protein l8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.064 9.171 y y y ruditapes_c18278 -2.636 0.011 23.259 8.822 y y y ruditapes_c9152 -2.812 0.011 21.259 7.56 y y y ruditapes2_c1618 -2.852 0.011 20.747 7.275 y y y ruditapes_c5920 -2.999 0.011 19.44 6.482 y y y ruditapes2_c1299 -3.03 0.011 19.488 6.432 y y y ruditapes_c10703 -3.208 0.011 18.183 5.668 y y y ruditapes2_c813 -3.221 0.011 18 5.588 y y y ruditapes_c20952 -3.415 0.011 16.87 4.94 y y y ruditapes2_c1613 -3.438 0.011 16.742 4.87 y y y ruditapes2_c1634 -3.672 0.011 15.606 4.251 y y y ruditapes_c29492 -3.685 0.011 15.555 4.221 y y y ruditapes_c12981 -3.712 0.011 15.525 4.182 y y y ruditapes2_lrc4897 -3.929 0.011 hydrogen-transporting atp g- /// 0005811 // lipid particle 14.823 3.773 y y y ruditapes_lrc12122 -4.012 0.011 14.342 3.575 y y y ruditapes_c13876 -4.065 0.011 14.204 3.494 y y y ruditapes_lrc33513 -4.217 0.011 13.969 3.312 y y y ruditapes_lrc30806 -4.236 0.011 13.697 3.234 y y y ruditapes_c8302 -4.385 0.011 13.442 3.065 y y y ruditapes_c17933 -4.686 0.011 12.784 2.728 y y y ruditapes_c8981 -4.776 0.011 12.56 2.63 y y y ruditapes_c10679 -5.074 0.011 12.017 2.368 y y y ruditapes_c11266 -5.534 0.011 11.399 2.06 y y y ruditapes_c26696 -6.155 0.011 10.653 1.731 y y y ruditapes_c5489 -7.698 0.011 glutathione s-transferase /// 0005515 // protein binding 9.706 1.261 y y y ruditapes_lrc23558 -9.785 0.011 8.825 0.902 y y y ruditapes_lrc34665 -10.891 0.011 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 8.507 0.781 y y y ruditapes2_c246 1.213 0.012 60s acidic ribosomal protein p0 /// 0005622 // intracellular 285.368 346.085 y n n ruditapes_c32240 -1.334 0.012 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 186.434 139.797 y n n ruditapes_c16236 -1.41 0.012 133.92 94.955 y n n ruditapes2_lrc4736 -1.416 0.012 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 129.53 91.5 y n n ruditapes_c8033 -1.503 0.012 96.802 64.396 y y y ruditapes2_c2208 -1.536 0.012 87.745 57.123 y y y ruditapes2_c1007 -1.626 0.012 70.883 43.607 y y y ruditapes_c3758 -1.666 0.012 64.753 38.878 y y y ruditapes_c30846 -1.674 0.012 63.442 37.909 y y y ruditapes_c22309 -1.738 0.012 57.054 32.831 y y y ruditapes_c31956 -1.751 0.012 54.725 31.246 y y y ruditapes_c19298 2.182 0.012 14.3 31.203 y y y ruditapes_c720 -1.817 0.012 49.232 27.096 y y y ruditapes_c25935 -1.964 0.012 40.268 20.499 y y y ruditapes_c3678 -1.968 0.012 40.202 20.431 y y y ruditapes_c2570 -1.995 0.012 38.608 19.352 y y y ruditapes2_c2135 -2.014 0.012 37.747 18.739 y y y ruditapes2_lrc3482 -2.042 0.012 atp synthase subunit b 37.201 18.222 y y y ruditapes2_c2278 -2.048 0.012 36.951 18.047 y y y ruditapes_c3145 -2.095 0.012 34.917 16.663 y y y ruditapes_c13294 -2.13 0.012 33.814 15.875 y y y ruditapes_c17205 -2.134 0.012 33.188 15.554 y y y ruditapes2_c1944 -2.16 0.012 32.723 15.153 y y y ruditapes_c3427 -2.189 0.012 31.854 14.551 y y y ruditapes_c18339 -2.199 0.012 31.534 14.34 y y y ruditapes_c8762 -2.231 0.012 30.395 13.622 y y y ruditapes_c1641 -2.272 0.012 29.562 13.011 y y y ruditapes_c7738 -2.273 0.012 29.166 12.832 y y y ruditapes_c2601 -2.36 0.012 foot protein-4 variant-1 27.73 11.75 y y y ruditapes_c16297 -2.373 0.012 27.241 11.481 y y y ruditapes2_c1538 -2.374 0.012 26.994 11.369 y y y ruditapes2_c1989 -2.401 0.012 26.76 11.145 y y y ruditapes_lrc17289 -2.432 0.012 26.148 10.751 y y y ruditapes_c11395 -2.607 0.012 23.524 9.023 y y y ruditapes_c12998 -2.604 0.012 23.471 9.014 y y y ruditapes2_c2074 -2.62 0.012 mgc81827 protein 23.043 8.797 y y y ruditapes_c24140 -2.733 0.012 21.936 8.028 y y y ruditapes_c9156 -2.792 0.012 20.991 7.519 y y y ruditapes_c17670 -2.838 0.012 20.612 7.264 y y y ruditapes2_c2151 -2.854 0.012 20.342 7.127 y y y ruditapes_c12712 -2.862 0.012 20.184 7.052 y y y ruditapes_c24413 -2.946 0.012 19.531 6.631 y y y ruditapes2_lrc5755 -3 0.012 60s ribosomal protein l23 /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 18.94 6.314 y y y ruditapes_c19983 -3.099 0.012 18.396 5.937 y y y ruditapes2_c2268 -3.113 0.012 18.339 5.891 y y y ruditapes_c18502 -3.274 0.012 17.274 5.276 y y y ruditapes_c10136 -3.349 0.012 16.694 4.985 y y y ruditapes_c2767 -3.389 0.012 16.445 4.853 y y y ruditapes_c6257 -3.979 0.012 14.135 3.552 y y y ruditapes_c13114 -4.276 0.012 13.255 3.099 y y y ruditapes_c14203 -4.565 0.012 12.811 2.807 y y y ruditapes2_lrc4908 -4.726 0.012 cyclophilin-type peptidyl-prolyl cis-trans isomerase 12.24 2.59 y y y ruditapes_c18994 -5.043 0.012 11.851 2.35 y y y ruditapes_c21608 -6.108 0.012 10.647 1.743 y y y ruditapes_c20959 -7.148 0.012 9.769 1.367 y y y ruditapes_c17586 -7.845 0.012 9.439 1.203 y y y ruditapes_c23338 -8.895 0.012 8.936 1.005 y y y ruditapes_c14182 -11.542 0.012 8.261 0.716 y y y ruditapes_lrc35630 -13.539 0.012 7.86 0.581 y y y ruditapes_c3978 -1.522 0.013 88.896 58.403 y y y ruditapes2_c2022 -1.672 0.013 63.177 37.782 y y y ruditapes_c31891 -1.789 0.013 50.561 28.268 y y y ruditapes2_c370 -1.899 0.013 43.116 22.706 y y y ruditapes_lrc27510 2.688 0.013 cytochrome oxidase subunit 1 /// 0046914 // transition metal ion binding /// 0016020 // membrane /// 0008152 // metabolic process 7.815 21.011 y y y ruditapes_c28351 2.865 0.013 6.719 19.249 y y y ruditapes2_lrc6026 -2.088 0.013 ependymin related protein 1 precursor 33.839 16.205 y y y ruditapes2_c2103 -2.144 0.013 31.948 14.898 y y y ruditapes_c16289 -2.178 0.013 31.326 14.386 y y y ruditapes_c3021 -2.175 0.013 31.177 14.335 y y y ruditapes_c26021 -2.269 0.013 28.652 12.628 y y y ruditapes_c19317 -2.274 0.013 28.697 12.622 y y y ruditapes_c12559 -2.307 0.013 27.7 12.005 y y y ruditapes2_lrc5184 -2.351 0.013 27.176 11.559 y y y ruditapes_c13970 -2.615 0.013 22.464 8.591 y y y ruditapes_c4609 -2.656 0.013 22.03 8.294 y y y ruditapes_c4804 -2.882 0.013 transmembrane protein 103 19.564 6.788 y y y ruditapes_c25464 -3.065 0.013 gene model 18.064 5.894 y y y ruditapes_c24872 -3.123 0.013 serine protease inhibitor 2 17.821 5.706 y y y ruditapes_lrc27277 -3.205 0.013 17.285 5.392 y y y ruditapes_lrc18020 -3.278 0.013 16.926 5.163 y y y ruditapes_c29690 -3.389 0.013 16.255 4.797 y y y ruditapes_lrc36241 -3.394 0.013 16.189 4.77 y y y ruditapes2_c2916 -3.433 0.013 15.887 4.628 y y y ruditapes_c27104 -3.47 0.013 15.741 4.537 y y y ruditapes2_c7159 -3.479 0.013 15.78 4.536 y y y ruditapes_c3910 -3.547 0.013 15.573 4.39 y y y ruditapes_c28763 -3.743 0.013 14.672 3.919 y y y ruditapes_c18271 -3.965 0.013 13.951 3.518 y y y ruditapes_c23758 -4.012 0.013 13.918 3.47 y y y ruditapes_c23768 -4.645 0.013 12.262 2.64 y y y ruditapes_c30484 -6.086 0.013 10.423 1.713 y y y ruditapes_c25797 -8.895 0.013 8.816 0.991 y y y ruditapes_c26854 -12.601 0.013 7.855 0.623 y y y ruditapes_lrc24381 -16.678 0.013 7.375 0.442 y y y ruditapes_c2315 1.623 0.014 39.606 64.261 y y y ruditapes_c19928 -1.517 0.014 88.41 58.262 y y y ruditapes2_c3028 -1.527 0.014 86.17 56.445 y y y ruditapes2_c2065 -1.541 0.014 83.63 54.273 y y y ruditapes2_lrc4632 -1.541 0.014 83.131 53.963 y y y ruditapes2_c331 -1.546 0.014 tgf beta-inducible nuclear protein 1 82.081 53.083 y y y ruditapes2_c237 -1.587 0.014 cofi_gibze ame: full=cofilin ame: full=actin-depolymerizing factor 1 /// 0044424 // intracellular part 73.893 46.564 y y y ruditapes_lrc33287 2.036 0.014 ubiquitin a-52 residue ribosomal protein fusion product 1 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0006464 // protein modification process 16.7 34.001 y y y ruditapes2_c21 -1.871 0.014 43.49 23.24 y y y ruditapes2_c1608 -1.873 0.014 43.097 23.006 y y y ruditapes_c2187 -1.944 0.014 39.631 20.388 y y y ruditapes2_c556 -1.971 0.014 38.063 19.313 y y y ruditapes_c17510 -2.055 0.014 34.842 16.952 y y y ruditapes2_lrc3114 -2.061 0.014 34.416 16.701 y y y ruditapes_c24045 -2.236 0.014 28.763 12.865 y y y ruditapes_c1332 -2.251 0.014 28.667 12.736 y y y ruditapes_c15012 4.655 0.014 2.525 11.753 y y y ruditapes_c16644 -2.468 0.014 24.27 9.833 y y y ruditapes_c9816 -2.565 0.014 22.666 8.836 y y y ruditapes_c30024 -2.688 0.014 21.468 7.987 y y y ruditapes2_c1217 -2.96 0.014 18.575 6.275 y y y ruditapes_c10644 -3.106 0.014 accessory gland protein 17.6 5.667 y y y ruditapes_c15005 -3.302 0.014 16.203 4.906 y y y ruditapes_c10928 -3.42 0.014 15.589 4.558 y y y ruditapes_c13192 -3.73 0.014 14.451 3.874 y y y ruditapes2_c2711 -3.804 0.014 14.084 3.702 y y y ruditapes2_lrc1548 -4.619 0.014 12.156 2.632 y y y ruditapes_c10034 -4.958 0.014 11.526 2.325 y y y ruditapes_lrc33698 -6.983 0.014 9.404 1.347 y y y ruditapes_c15668 -8.544 0.014 8.641 1.011 y y y ruditapes_c30894 -12.601 0.014 7.761 0.616 y y y ruditapes2_c355 -1.441 0.015 animal haem peroxidase family protein 111.53 77.395 y n n ruditapes2_c2753 -1.512 0.015 88.709 58.683 y y y ruditapes_lrc34295 -1.578 0.015 ribosomal protein l18a /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005515 // protein binding /// 0005829 // cytosol 73.652 46.674 y y y ruditapes2_c5219 -1.65 0.015 large subunit ribosomal protein 30 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 63.444 38.452 y y y ruditapes_c8050 -1.771 0.015 49.967 28.218 y y y ruditapes_c866 -1.818 0.015 46.164 25.399 y y y ruditapes_c12086 -1.827 0.015 45.49 24.894 y y y ruditapes2_c603 -1.872 0.015 cathepsin b /// 0005739 // mitochondrion /// 0006508 // proteolysis /// 0005515 // protein binding /// 0005764 // lysosome /// 0042470 // melanosome /// 0050790 // regulation of catalytic activity /// 0004197 // cysteine-type endopeptidase activity 42.966 22.958 y y y ruditapes_c20770 -1.908 0.015 40.41 21.181 y y y ruditapes_c11180 -1.966 0.015 37.703 19.174 y y y ruditapes_c11438 -2.007 0.015 35.607 17.739 y y y ruditapes_c19200 -2.02 0.015 35.563 17.608 y y y ruditapes_s37429 -2.028 0.015 alpha 3 type vi collagen isoform 1 precursor 35.325 17.421 y y y ruditapes_c3189 -2.104 0.015 32.436 15.417 y y y ruditapes_lrc33374 -2.141 0.015 ribosomal protein s6 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006955 // immune response 30.962 14.461 y y y ruditapes_c25773 -2.263 0.015 27.57 12.184 y y y ruditapes_c31297 -2.356 0.015 25.906 10.996 y y y ruditapes_c18676 5.246 0.015 2.059 10.803 y y y ruditapes_c4756 -2.474 0.015 23.903 9.66 y y y ruditapes_c28019 -2.483 0.015 23.5 9.466 y y y ruditapes_c4394 -2.659 0.015 21.13 7.948 y y y ruditapes2_c1846 -2.73 0.015 20.23 7.411 y y y ruditapes_c13200 -2.77 0.015 serine protease inhibitor 2 19.948 7.202 y y y ruditapes_c13175 -2.81 0.015 19.384 6.898 y y y ruditapes_lrc33086 -2.828 0.015 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 19.209 6.794 y y y ruditapes_c15174 -2.973 0.015 18.129 6.097 y y y ruditapes2_c3473 -3.241 0.015 16.274 5.021 y y y ruditapes_c27474 -3.993 0.015 13.347 3.343 y y y ruditapes_c19273 -4.281 0.015 12.566 2.935 y y y ruditapes_c6906 -4.543 0.015 11.835 2.605 y y y ruditapes_c27141 -4.861 0.015 11.336 2.332 y y y ruditapes2_c1335 -5.63 0.015 10.419 1.851 y y y ruditapes_c4257 -5.69 0.015 copine family protein 10.235 1.799 y y y ruditapes_c12065 -6.065 0.015 9.983 1.646 y y y ruditapes_c18687 -7.624 0.015 8.919 1.17 y y y ruditapes_c29979 -8.061 0.015 8.757 1.086 y y y ruditapes_lrc23039 -9.933 0.015 8.005 0.806 y y y ruditapes_c32686 -10.625 0.015 egf-like domain-containing protein 7.878 0.741 y y y ruditapes2_c2164 -13.997 0.015 7.367 0.526 y y y ruditapes_c16987 -20.649 0.015 6.848 0.332 y y y ruditapes_c31406 -? 0.015 5.9 0 y y y ruditapes2_c151 -1.259 0.016 258.343 205.119 y n n ruditapes2_c286 -1.504 0.016 88.807 59.031 y y y ruditapes2_c683 -1.63 0.016 calmodulin /// 0005524 // ATP binding /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0005634 // nucleus /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0004721 // phosphoprotein phosphatase activity /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0008270 // zinc ion binding /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0005506 // iron ion binding /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0043388 // positive regulation of DNA binding /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 64.693 39.686 y y y ruditapes_c22906 1.986 0.016 17.51 34.781 y y y ruditapes2_c5473 -1.705 0.016 55.489 32.541 y y y ruditapes_c7303 -1.721 0.016 53.838 31.292 y y y ruditapes_c7302 -1.726 0.016 52.664 30.507 y y y ruditapes2_c780 -1.746 0.016 51.685 29.611 y y y ruditapes2_c409 -1.74 0.016 51.39 29.53 y y y ruditapes_c7528 -1.845 0.016 43.888 23.794 y y y ruditapes_lrc32628 -1.888 0.016 cathepsin l 40.846 21.636 y y y ruditapes_c31618 -2.027 0.016 34.595 17.066 y y y ruditapes_c2346 -2.048 0.016 33.712 16.461 y y y ruditapes_c20630 -2.072 0.016 32.872 15.862 y y y ruditapes_c29992 -2.079 0.016 32.261 15.516 y y y ruditapes_c2796 -2.135 0.016 30.808 14.428 y y y ruditapes2_c2762 -2.248 0.016 27.685 12.314 y y y ruditapes_lrc36525 -2.26 0.016 guanine nucleotide binding protein beta polypeptide 2-like 1 /// 0019903 // protein phosphatase binding /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding /// 0007165 // signal transduction 27.592 12.209 y y y ruditapes2_c641 -2.409 0.016 24.236 10.063 y y y ruditapes2_c2687 -2.564 0.016 22.147 8.637 y y y ruditapes_c25293 -2.706 0.016 20.317 7.507 y y y ruditapes_c12893 -2.733 0.016 19.965 7.304 y y y ruditapes_lrc20020 -2.846 0.016 18.87 6.63 y y y ruditapes_c3546 -2.939 0.016 18.192 6.191 y y y ruditapes_c14604 -3.234 0.016 retinal homeobox protein 16.026 4.956 y y y ruditapes_c22460 -3.295 0.016 15.628 4.743 y y y ruditapes_c19800 -3.699 0.016 14.006 3.787 y y y ruditapes_c27499 -3.682 0.016 13.915 3.78 y y y ruditapes_c11379 -3.837 0.016 13.592 3.543 y y y ruditapes_c20635 -3.924 0.016 13.285 3.385 y y y ruditapes_c9534 -3.956 0.016 13.147 3.323 y y y ruditapes_c23147 -4.26 0.016 12.301 2.888 y y y ruditapes_c14358 -5.003 0.016 10.9 2.178 y y y ruditapes_c29159 -5.587 0.016 10.128 1.813 y y y ruditapes_c10255 -7.933 0.016 8.595 1.083 y y y ruditapes_lrc38284 -42.808 0.016 6.27 0.146 y y y ruditapes_c25921 -51.147 0.016 6.168 0.121 y y y ruditapes_c21807 -1.31 0.017 186.838 142.587 y n n ruditapes_c7350 -1.318 0.017 181.556 137.735 y n n ruditapes_lrc36032 1.503 0.017 nadh dehydrogenase subunit 1 54.832 82.391 y y y ruditapes_c21541 -1.56 0.017 75.36 48.3 y y y ruditapes_c8035 -1.606 0.017 67.068 41.766 y y y ruditapes_c3827 -1.773 0.017 48.129 27.14 y y y ruditapes_c26314 -1.976 0.017 36.129 18.288 y y y ruditapes_c1671 3.185 0.017 translationally controlled tumor protein /// 0007275 // multicellular organismal development /// 0040007 // growth /// 0005488 // binding 4.959 15.796 y y y ruditapes2_c2922 -2.124 0.017 30.49 14.354 y y y ruditapes2_lrc4096 -2.228 0.017 mgc89694 protein /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 27.54 12.362 y y y ruditapes_s38104 -2.249 0.017 27.187 12.089 y y y ruditapes_c18529 -2.436 0.017 23.489 9.641 y y y ruditapes_c5637 -2.454 0.017 23.218 9.462 y y y ruditapes_c17152 -2.66 0.017 src tyrosine /// 0040007 // growth /// 0002119 // nematode larval development /// 0008406 // gonad development /// 0005488 // binding /// 0040011 // locomotion /// 0040035 // hermaphrodite genitalia development /// 0004672 // protein kinase activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 20.461 7.693 y y y ruditapes_c9350 -2.697 0.017 predicted protein [Nematostella vectensis] 20.055 7.436 y y y ruditapes_c28745 -2.749 0.017 19.332 7.033 y y y ruditapes_c9744 -2.846 0.017 18.439 6.478 y y y ruditapes_c31290 ? 0.017 0 5.749 y y y ruditapes_lrc14283 -3.076 0.017 16.722 5.435 y y y ruditapes_c30192 -3.329 0.017 15.159 4.553 y y y ruditapes_c22724 -3.403 0.017 14.834 4.359 y y y ruditapes_c31545 -3.993 0.017 12.838 3.215 y y y ruditapes_c16442 -4.924 0.017 10.907 2.215 y y y ruditapes_c12868 -6.671 0.017 9.119 1.367 y y y ruditapes2_c4074 -9.719 0.017 calcium-binding ef-hand domain protein 7.789 0.801 y y y ruditapes_lrc12139 -65.601 0.017 5.97 0.091 y y y ruditapes2_c4312 -1.402 0.018 ribosomal protein s12 /// 0006414 // translational elongation /// 0005739 // mitochondrion /// 0022627 // cytosolic small ribosomal subunit 120.895 86.229 y n n ruditapes_lrc8556 -1.498 0.018 87.317 58.288 y n n ruditapes_lrc29932 -1.692 0.018 54.469 32.184 y y y ruditapes_c8573 -1.713 0.018 52.085 30.41 y y y ruditapes_lrc35917 -1.934 0.018 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 37.402 19.344 y y y ruditapes_c8187 -1.993 0.018 34.27 17.195 y y y ruditapes_lrc34349 3.051 0.018 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 5.305 16.189 y y y ruditapes_c4300 -2.121 0.018 30.166 14.226 y y y ruditapes_c16700 -2.244 0.018 26.826 11.953 y y y ruditapes_c29007 -2.264 0.018 26.432 11.674 y y y ruditapes_c16634 -2.443 0.018 22.738 9.305 y y y ruditapes_c27441 -2.48 0.018 22.176 8.943 y y y ruditapes_c25679 -2.541 0.018 21.652 8.52 y y y ruditapes_c12201 -2.623 0.018 20.395 7.776 y y y ruditapes_lrc30543 -2.635 0.018 20.294 7.703 y y y ruditapes_lrc34976 -2.673 0.018 19.77 7.397 y y y ruditapes_c8657 -2.686 0.018 19.564 7.283 y y y ruditapes_c13337 -2.812 0.018 18.364 6.53 y y y ruditapes_c24436 -2.842 0.018 18.259 6.424 y y y ruditapes_c30969 -2.842 0.018 18.16 6.389 y y y ruditapes_c1839 -2.897 0.018 17.826 6.153 y y y ruditapes2_c287 -2.944 0.018 mitochondrial ribosomal protein s6 /// 0005739 // mitochondrion /// 0015935 // small ribosomal subunit 17.331 5.887 y y y ruditapes_c26453 -2.958 0.018 17.315 5.854 y y y ruditapes_c6551 -3.039 0.018 16.689 5.492 y y y ruditapes_c7467 -3.405 0.018 coiled-coil domain containing 137 14.567 4.278 y y y ruditapes_c25176 -3.487 0.018 14.227 4.08 y y y ruditapes_c27963 -3.872 0.018 surface protein /// 0007126 // meiosis /// 0003774 // motor activity /// 0007064 // mitotic sister chromatid cohesion /// 0005816 // spindle pole body /// 0000742 // karyogamy during conjugation with cellular fusion /// 0007017 // microtubule-based process 12.841 3.316 y y y ruditapes_lrc26272 -4.499 0.018 11.446 2.544 y y y ruditapes_c26041 -4.487 0.018 trna (guanine-n7-)-methyltransferase /// 0006400 // tRNA modification /// 0008176 // tRNA (guanine-N7-)-methyltransferase activity /// 0009792 // embryonic development ending in birth or egg hatching 11.338 2.527 y y y ruditapes_c23453 -4.494 0.018 11.307 2.516 y y y ruditapes_c27614 -4.726 0.018 scavenger receptor cysteine-rich protein 11.033 2.335 y y y ruditapes2_c806 -16.122 0.018 6.768 0.42 y y y ruditapes_c24521 -16.901 0.018 hypothetical protein CaO19.63 [Candida albicans SC5314] 6.747 0.399 y y y ruditapes2_c3104 -20.014 0.018 6.557 0.328 y y y ruditapes2_c5144 -1.258 0.019 ribosomal protein l39 /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 250.466 199.064 y n n ruditapes2_c299 -1.295 0.019 198.695 153.482 y n n ruditapes_c10165 -1.427 0.019 109.097 76.428 y n n ruditapes2_c917 -1.455 0.019 98.628 67.783 y n n ruditapes_c9230 -1.605 0.019 64.09 39.929 y y y ruditapes2_c1696 -1.637 0.019 60.471 36.951 y y y ruditapes_c13287 -1.66 0.019 57.097 34.395 y y y ruditapes2_c43 2.038 0.019 15.317 31.21 y y y ruditapes_c12084 -1.716 0.019 50.953 29.696 y y y ruditapes_c25109 -1.919 0.019 37.498 19.545 y y y ruditapes_c8916 -1.925 0.019 36.696 19.064 y y y ruditapes_lrc33848 2.848 0.019 6.14 17.488 y y y ruditapes_c20822 2.945 0.019 5.682 16.735 y y y ruditapes2_lrc5975 -2.148 0.019 28.556 13.292 y y y ruditapes_lrc33726 -2.218 0.019 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 26.874 12.117 y y y ruditapes2_c3436 -2.379 0.019 tetraspanin 3 /// 0016020 // membrane 23.486 9.871 y y y ruditapes_c7497 -2.487 0.019 22.036 8.861 y y y ruditapes2_c931 -2.532 0.019 21.152 8.355 y y y ruditapes2_c2742 -2.965 0.019 16.891 5.697 y y y ruditapes_c28495 -3.063 0.019 16.277 5.314 y y y ruditapes_c14116 -3.191 0.019 15.373 4.817 y y y ruditapes_c6399 -3.33 0.019 14.819 4.45 y y y ruditapes_lrc34355 -3.354 0.019 lysozyme [Venerupis philippinarum] 14.547 4.338 y y y ruditapes_s39680 -3.502 0.019 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding 14.011 4.001 y y y ruditapes2_c2331 -3.685 0.019 13.359 3.625 y y y ruditapes2_c251 -4.113 0.019 mitochondrial ribosomal protein s21 /// 0005763 // mitochondrial small ribosomal subunit /// 0006412 // translation /// 0005743 // mitochondrial inner membrane /// 0003735 // structural constituent of ribosome 12.015 2.921 y y y ruditapes_lrc33941 -4.245 0.019 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 11.769 2.772 y y y ruditapes_lrc33842 -6.977 0.019 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 8.558 1.227 y y y ruditapes_lrc32779 -20.014 0.019 mgc89694 protein /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 6.36 0.318 y y y ruditapes2_c483 -1.53 0.02 77.276 50.515 y y y ruditapes_c3009 -1.562 0.02 70.739 45.295 y y y ruditapes_c14142 -1.583 0.02 67.094 42.371 y y y ruditapes_c17027 -1.726 0.02 49.197 28.511 y y y ruditapes_c22526 -1.803 0.02 43.697 24.234 y y y ruditapes_c8860 -1.9 0.02 37.823 19.909 y y y ruditapes_c8306 -1.982 0.02 33.875 17.093 y y y ruditapes_c22295 -1.992 0.02 33.498 16.82 y y y ruditapes_c7936 -2.068 0.02 30.698 14.842 y y y ruditapes_c8797 -2.112 0.02 29.344 13.892 y y y ruditapes2_c711 3.418 0.02 4.051 13.845 y y y ruditapes_c8835 -2.137 0.02 28.751 13.455 y y y ruditapes_c23527 -2.15 0.02 28.038 13.043 y y y ruditapes_c28329 -2.541 0.02 20.918 8.231 y y y ruditapes_c6348 9.533 0.02 0.779 7.431 y y y ruditapes_c14113 -2.965 0.02 16.592 5.596 y y y ruditapes2_lrc4741 -2.997 0.02 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 16.436 5.484 y y y ruditapes2_c1921 -3.021 0.02 16.307 5.398 y y y ruditapes_c2800 -3.235 0.02 14.895 4.604 y y y ruditapes_c8796 -3.381 0.02 14.285 4.225 y y y ruditapes_c11504 -3.602 0.02 13.375 3.713 y y y ruditapes_c15778 -3.639 0.02 13.275 3.648 y y y ruditapes_c7853 -3.723 0.02 13.033 3.501 y y y ruditapes_c13534 -3.847 0.02 12.459 3.239 y y y ruditapes2_c1314 -3.864 0.02 12.47 3.227 y y y ruditapes_lrc35836 -3.874 0.02 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0019674 // NAD metabolic process /// 0006107 // oxaloacetate metabolic process /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0004470 // malic enzyme activity 12.386 3.197 y y y ruditapes2_c2373 -3.939 0.02 12.288 3.119 y y y ruditapes_c23917 -5.877 0.02 9.214 1.568 y y y ruditapes_c28443 -7.487 0.02 8.259 1.103 y y y ruditapes_lrc15055 -8.26 0.02 7.821 0.947 y y y ruditapes_c28313 -11.489 0.02 7.021 0.611 y y y ruditapes_c28259 -15.395 0.02 6.65 0.432 y y y ruditapes2_c3888 -1.314 0.021 172.089 130.931 y n n ruditapes_c4025 -1.325 0.021 elongation factor 1-gamma /// 0006412 // translation 162.423 122.589 y n n ruditapes_c5403 1.547 0.021 zgc:172187 protein /// 0032501 // multicellular organismal process /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0048522 // positive regulation of cellular process /// 0051439 // regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005737 // cytoplasm /// 0006464 // protein modification process 43.829 67.786 y y y ruditapes2_c1504 -1.623 0.021 59.967 36.951 y y y ruditapes2_c635 -1.645 0.021 profilin /// 0015629 // actin cytoskeleton /// 0003779 // actin binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization 57.655 35.053 y y y ruditapes_lrc33024 1.98 0.021 ribosomal protein l17 /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 16.223 32.116 y y y ruditapes2_c1206 -1.762 0.021 45.961 26.091 y y y ruditapes_c5427 -1.918 0.021 36.095 18.82 y y y ruditapes_c25570 -2.027 0.021 31.302 15.439 y y y ruditapes2_c3200 -2.093 0.021 prolyl-trna synthetase associated region 29.569 14.125 y y y ruditapes_c7862 -2.208 0.021 26.228 11.877 y y y ruditapes2_c6235 -2.231 0.021 25.893 11.604 y y y ruditapes_c23471 -2.302 0.021 24.256 10.539 y y y ruditapes2_lrc5040 -2.373 0.021 ferritin /// 0005488 // binding 22.944 9.669 y y y ruditapes2_c865 -2.505 0.021 vacuolar atp synthase 16 kda proteolipid subunit "/// 0005774 // vacuolar membrane /// 0015986 // ATP synthesis coupled proton transport /// 0016021 // integral to membrane /// 0033179 // proton-transporting V-type ATPase, V0 domain /// 0015078 // hydrogen ion transmembrane transporter activity /// 0060059 // embryonic retina morphogenesis in camera-type eye" 21.059 8.406 y y y ruditapes2_c132 -2.626 0.021 19.542 7.442 y y y ruditapes_c11255 -2.74 0.021 18.342 6.695 y y y ruditapes2_c2224 -2.742 0.021 18.222 6.646 y y y ruditapes_c18451 -2.816 0.021 17.536 6.228 y y y ruditapes_c9291 -2.987 0.021 16.129 5.399 y y y ruditapes_c1051 -3.547 0.021 13.383 3.773 y y y ruditapes_c14208 -3.542 0.021 13.326 3.762 y y y ruditapes_c22159 -3.619 0.021 coiled-coil domain containing 96 13.072 3.612 y y y ruditapes_c21670 -3.663 0.021 13.032 3.558 y y y ruditapes_c17682 -3.744 0.021 12.72 3.398 y y y ruditapes2_lrc3366 -3.878 0.021 12.176 3.14 y y y ruditapes_c3273 -3.898 0.021 eukaryotic translation initiation factor 3 subunit 7 /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity /// 0005737 // cytoplasm 12.135 3.113 y y y ruditapes_c3593 -4.003 0.021 11.854 2.961 y y y ruditapes_lrc36763 -4.282 0.021 11.193 2.614 y y y ruditapes2_lrc4690 -5.436 0.021 9.547 1.756 y y y ruditapes_lrc31388 -6.065 0.021 conserved hypothetical protein [Culex quinquefasciatus] 8.953 1.476 y y y ruditapes_lrc18461 -8.021 0.021 7.794 0.972 y y y ruditapes_c29610 -16.308 0.021 6.441 0.395 y y y ruditapes_c20465 -16.431 0.021 6.44 0.392 y y y ruditapes_c29167 -18.108 0.021 6.355 0.351 y y y ruditapes_c30650 -33.357 0.021 5.799 0.174 y y y ruditapes_lrc21114 1.31 0.022 tubulin alpha-1 chain "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 119.963 157.148 y n n ruditapes_lrc34463 -1.647 0.022 ribosomal protein l35a /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0000003 // reproduction /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0040017 // positive regulation of locomotion /// 0009792 // embryonic development ending in birth or egg hatching 56.526 34.328 y y y ruditapes_s38583 -1.704 0.022 49.695 29.162 y y y ruditapes2_c929 -1.711 0.022 49.022 28.645 y y y ruditapes2_c298 -1.794 0.022 42.88 23.9 y y y ruditapes_c9289 -1.979 0.022 33.047 16.695 y y y ruditapes_lrc36885 2.855 0.022 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 5.832 16.652 y y y ruditapes_c30174 -2.04 0.022 30.379 14.888 y y y ruditapes_c2960 -2.26 0.022 24.871 11.007 y y y ruditapes_lrc30546 -2.319 0.022 23.504 10.137 y y y ruditapes_lrc34337 -2.4 0.022 22.165 9.234 y y y ruditapes_lrc8154 -2.412 0.022 21.965 9.107 y y y ruditapes_c440 -2.622 0.022 19.311 7.365 y y y ruditapes_c2935 -2.671 0.022 18.577 6.956 y y y ruditapes2_c716 -2.803 0.022 17.404 6.209 y y y ruditapes_c13785 -2.808 0.022 17.264 6.148 y y y ruditapes_c949 -2.978 0.022 16.159 5.426 y y y ruditapes_c15609 -3.168 0.022 splicing factor subunit 10kda "/// 0005681 // spliceosomal complex /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 14.799 4.671 y y y ruditapes_c3552 -3.297 0.022 14.132 4.287 y y y ruditapes_c15286 -3.317 0.022 14.101 4.25 y y y ruditapes_c29205 -3.779 0.022 12.278 3.249 y y y ruditapes_lrc26269 -3.969 0.022 11.738 2.958 y y y ruditapes_c18626 -4.216 0.022 11.186 2.653 y y y ruditapes_lrc7429 -4.259 0.022 11.106 2.608 y y y ruditapes_c22534 -9.034 0.022 7.397 0.819 y y y ruditapes_c16257 -10.411 0.022 7.066 0.679 y y y ruditapes_c8286 -19.003 0.022 6.205 0.327 y y y ruditapes2_c5433 1.135 0.023 60s acidic ribosomal protein p1 /// 0044444 // cytoplasmic part 549.167 623.082 y n n ruditapes_c1706 -1.653 0.023 54.178 32.767 y y y ruditapes2_lrc3404 -1.678 0.023 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 51.601 30.757 y y y ruditapes2_c927 -1.696 0.023 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 50.217 29.602 y y y ruditapes_c14717 -1.749 0.023 45.383 25.943 y y y ruditapes2_c2627 -1.824 0.023 40.171 22.02 y y y ruditapes_c2021 -2.112 0.023 mgc84531 protein 27.772 13.147 y y y ruditapes_c27663 -2.13 0.023 27.582 12.947 y y y ruditapes_c11155 -2.324 0.023 22.994 9.892 y y y ruditapes_c22457 -2.357 0.023 22.559 9.57 y y y ruditapes_c3458 -2.539 0.023 19.763 7.782 y y y ruditapes_c14178 -3.043 0.023 15.34 5.041 y y y ruditapes_c14943 -3.41 0.023 13.54 3.971 y y y ruditapes_c27041 -3.9 0.023 11.781 3.021 y y y ruditapes_c18486 -4.543 0.023 10.506 2.313 y y y ruditapes_c23610 -5.442 0.023 9.264 1.702 y y y ruditapes_c9361 -6.093 0.023 8.713 1.43 y y y ruditapes_c26832 1.524 0.024 45.59 69.467 y y y ruditapes_c2135 -1.705 0.024 48.405 28.386 y y y ruditapes_c15449 -1.727 0.024 46.256 26.789 y y y ruditapes_c26251 -1.752 0.024 44.564 25.435 y y y ruditapes_c12255 -1.787 0.024 41.623 23.287 y y y ruditapes_c7239 -1.883 0.024 36.09 19.166 y y y ruditapes2_c3823 -1.96 0.024 malate dehydrogenase nad /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0005488 // binding /// 0006096 // glycolysis /// 0005737 // cytoplasm 32.458 16.56 y y y ruditapes_lrc35347 3.554 0.024 ribosomal protein s19 /// 0030529 // ribonucleoprotein complex 3.518 12.5 y y y ruditapes_lrc31623 3.897 0.024 cytochrome oxidase subunit 1 /// 0044237 // cellular metabolic process /// 0046872 // metal ion binding /// 0003824 // catalytic activity /// 0044464 // cell part 2.939 11.455 y y y ruditapes_c1299 -2.224 0.024 24.866 11.182 y y y ruditapes_c3028 -2.281 0.024 23.443 10.279 y y y ruditapes2_c642 -2.318 0.024 22.755 9.818 y y y ruditapes2_c1376 -2.366 0.024 alpha tubulin 22.212 9.39 y y y ruditapes_lrc16425 -2.375 0.024 ribosomal protein s2 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005654 // nucleoplasm /// 0048604 // fibroblast growth factor 3 binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0048602 // fibroblast growth factor 1 binding 22.049 9.282 y y y ruditapes_c3837 -2.387 0.024 21.712 9.094 y y y ruditapes_c10475 -2.522 0.024 19.881 7.882 y y y ruditapes_c25267 -2.531 0.024 19.812 7.827 y y y ruditapes_c20484 -2.72 0.024 17.616 6.477 y y y ruditapes_lrc35006 -2.897 0.024 16.181 5.586 y y y ruditapes_c19038 -2.927 0.024 15.983 5.461 y y y ruditapes_c9915 -3.518 0.024 serologically defined colon cancer antigen 1 12.885 3.662 y y y ruditapes_c20491 -3.592 0.024 12.669 3.527 y y y ruditapes_c14254 -3.611 0.024 12.504 3.463 y y y ruditapes_c20993 -3.645 0.024 12.394 3.4 y y y ruditapes_lrc16984 -4.184 0.024 10.903 2.606 y y y ruditapes_c20251 -4.448 0.024 10.381 2.334 y y y ruditapes_c25484 -6.74 0.024 8.08 1.199 y y y ruditapes_lrc33058 -7.809 0.024 7.62 0.976 y y y ruditapes_c10116 -1.635 0.025 54.857 33.543 y y y ruditapes_c34139 -1.703 0.025 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 47.993 28.184 y y y ruditapes_c2293 -1.929 0.025 33.369 17.3 y y y ruditapes2_c2232 -1.988 0.025 31.076 15.63 y y y ruditapes_c19535 -2.035 0.025 29.517 14.507 y y y ruditapes_c19546 -2.306 0.025 22.754 9.868 y y y ruditapes_s38880 -2.345 0.025 elongation factor 1 beta 22.214 9.471 y y y ruditapes_c8304 -2.356 0.025 22.056 9.363 y y y ruditapes_lrc33724 -2.355 0.025 22.002 9.343 y y y ruditapes_c4606 -2.454 0.025 20.371 8.3 y y y ruditapes_c18404 -2.497 0.025 19.955 7.992 y y y ruditapes_c28137 -2.874 0.025 16.203 5.639 y y y ruditapes_c19727 -3.408 0.025 13.13 3.852 y y y ruditapes_c512 -4.077 0.025 11.016 2.702 y y y ruditapes2_c2822 -4.929 0.025 9.516 1.93 y y y ruditapes2_lrc4338 -7.325 0.025 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 7.711 1.053 y y y ruditapes_c29302 -8.577 0.025 7.241 0.844 y y y ruditapes_lrc11925 -13.66 0.025 6.294 0.461 y y y ruditapes2_c693 -22.844 0.025 prefoldin subunit 1 /// 0003700 // transcription factor activity /// 0016272 // prefoldin complex /// 0005886 // plasma membrane /// 0007049 // cell cycle /// 0051082 // unfolded protein binding /// 0006457 // protein folding 5.763 0.252 y y y ruditapes2_c887 -1.571 0.026 63.291 40.278 y y y ruditapes_c22761 -1.581 0.026 61.678 39.024 y y y ruditapes2_c138 -1.627 0.026 protein 55.264 33.96 y y y ruditapes_c8953 -2.005 0.026 30.026 14.975 y y y ruditapes_c6589 -2.074 0.026 27.796 13.405 y y y ruditapes_c18623 -2.142 0.026 26.016 12.145 y y y ruditapes_c10206 -2.169 0.026 25.355 11.688 y y y ruditapes_c23670 -2.518 0.026 19.278 7.655 y y y ruditapes_c16847 -2.566 0.026 18.708 7.291 y y y ruditapes_c26589 -2.655 0.026 17.7 6.668 y y y ruditapes2_c922 -3.112 0.026 14.365 4.616 y y y ruditapes_c19678 -3.16 0.026 14.024 4.438 y y y ruditapes_c30455 -3.384 0.026 13.032 3.851 y y y ruditapes_c17261 -3.6 0.026 12.301 3.417 y y y ruditapes_c18692 -3.775 0.026 11.714 3.103 y y y ruditapes_c11009 -4.073 0.026 aconitase family member (aco-2) /// 0007275 // multicellular organismal development /// 0000003 // reproduction 10.939 2.686 y y y ruditapes_c15559 -4.081 0.026 10.858 2.66 y y y ruditapes_c3772 -4.48 0.026 10.173 2.271 y y y ruditapes_c16491 -5.033 0.026 9.264 1.841 y y y ruditapes2_c2635 -5.102 0.026 9.223 1.808 y y y ruditapes_c24070 -5.093 0.026 protein 9.199 1.806 y y y ruditapes2_lrc2445 -6.354 0.026 8.145 1.282 y y y ruditapes_c26762 -10.563 0.026 6.654 0.63 y y y ruditapes_c4445 1.601 0.027 34.415 55.103 y y y ruditapes_c5022 -1.525 0.027 70.65 46.335 y y y ruditapes_lrc32594 -1.662 0.027 apextrin 50.729 30.524 y y y ruditapes2_c1872 -1.745 0.027 43.303 24.822 y y y ruditapes_c10295 -1.745 0.027 43.2 24.758 y y y ruditapes_c6354 -1.891 0.027 34.458 18.221 y y y ruditapes_s38143 -1.917 0.027 33.061 17.246 y y y ruditapes_c5178 -2.042 0.027 28.546 13.982 y y y ruditapes_c4743 -2.077 0.027 27.415 13.197 y y y ruditapes2_c1816 -2.095 0.027 27.005 12.89 y y y ruditapes_c4090 -2.349 0.027 axonemal dynein light chain p33 21.562 9.178 y y y ruditapes_c5062 -2.408 0.027 20.565 8.54 y y y ruditapes_c1648 -2.531 0.027 18.779 7.419 y y y ruditapes_lrc8076 -2.564 0.027 trove domain protein /// 0040010 // positive regulation of growth rate /// 0003723 // RNA binding /// 0044424 // intracellular part 18.573 7.245 y y y ruditapes_c6040 -2.825 0.027 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 15.992 5.66 y y y ruditapes_lrc35970 -3.014 0.027 angiopoietin-like 2 /// 0005576 // extracellular region 14.649 4.86 y y y ruditapes_c17438 -3.228 0.027 13.589 4.21 y y y ruditapes_c16201 -3.529 0.027 12.369 3.505 y y y ruditapes_lrc35190 -3.736 0.027 fungal metazoan origin like protein variant 2 /// 0016021 // integral to membrane 11.588 3.102 y y y ruditapes_lrc32392 -10.146 0.027 protein 6.634 0.654 y y y ruditapes_c3545 -1.141 0.028 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding 659.752 578.332 y n n ruditapes2_c920 -1.61 0.028 55.807 34.67 y y y ruditapes2_c1344 -1.776 0.028 40.273 22.674 y y y ruditapes_c15676 -2.001 0.028 29.408 14.697 y y y ruditapes_c30669 -2.017 0.028 28.845 14.298 y y y ruditapes_lrc30259 -2.358 0.028 21.004 8.907 y y y ruditapes_lrc24300 -2.433 0.028 19.995 8.218 y y y ruditapes2_c11 8.26 0.028 ubiquitin-conjugating enzyme e2d 3 (ubc4 5 yeast) isoform cra_a /// 0040007 // growth /// 0002119 // nematode larval development /// 0030509 // BMP signaling pathway /// 0051246 // regulation of protein metabolic process /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0031625 // ubiquitin protein ligase binding /// 0051276 // chromosome organization /// 0048477 // oogenesis /// 0008340 // determination of adult lifespan /// 0007140 // male meiosis /// 0040011 // locomotion /// 0016567 // protein ubiquitination /// 0040035 // hermaphrodite genitalia development /// 0007286 // spermatid development /// 0045676 // regulation of R7 cell differentiation /// 0004842 // ubiquitin-protein ligase activity /// 0007067 // mitosis /// 0009792 // embryonic development ending in birth or egg hatching 0.847 6.999 y y y ruditapes_c17659 -3.378 0.028 12.731 3.769 y y y ruditapes_c26582 -3.455 0.028 12.496 3.617 y y y ruditapes_c4565 -3.459 0.028 oncoprotein induced transcript 3 12.368 3.575 y y y ruditapes_c25790 -3.507 0.028 12.189 3.476 y y y ruditapes_c10073 -3.937 0.028 10.943 2.779 y y y ruditapes_c22285 -4.2 0.028 10.404 2.477 y y y ruditapes_lrc30715 -4.448 0.028 9.908 2.228 y y y ruditapes_c15905 -4.695 0.028 9.546 2.033 y y y ruditapes_c25864 -4.864 0.028 9.321 1.916 y y y ruditapes2_lrc5593 -5.021 0.028 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 9.069 1.806 y y y ruditapes_c18102 -5.604 0.028 8.522 1.521 y y y ruditapes_lrc33422 -1.34 0.029 40s ribosomal protein s10 /// 0005840 // ribosome 135.953 101.434 y n n ruditapes2_c1888 -1.503 0.029 72.913 48.52 y y y ruditapes_c4704 2.066 0.029 12.652 26.135 y y y ruditapes_lrc13423 -1.73 0.029 ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development /// 0051536 // iron-sulfur cluster binding 43.121 24.922 y y y ruditapes_c11973 -2.073 0.029 26.827 12.941 y y y ruditapes2_c2691 -2.192 0.029 23.744 10.834 y y y ruditapes_c18149 -2.451 0.029 19.528 7.967 y y y ruditapes2_c2343 -2.604 0.029 PREDICTED: hypothetical protein [Homo sapiens] 17.58 6.752 y y y ruditapes_c12993 -2.621 0.029 17.326 6.609 y y y ruditapes_c16812 -2.759 0.029 16.17 5.86 y y y ruditapes2_lrc2988 -2.785 0.029 ankyrin repeat domain 39 15.886 5.704 y y y ruditapes_c26741 -2.898 0.029 15.152 5.229 y y y ruditapes2_c394 -3.27 0.029 13.089 4.002 y y y ruditapes2_c1776 -3.306 0.029 12.888 3.899 y y y ruditapes_c22080 -3.663 0.029 11.578 3.161 y y y ruditapes2_c568 -4.349 0.029 protein 9.941 2.286 y y y ruditapes_c18699 -4.825 0.029 9.188 1.904 y y y ruditapes_c10681 -8.188 0.029 6.965 0.851 y y y ruditapes_lrc34519 -29.28 0.029 5.26 0.18 y y y ruditapes_c18325 -1.406 0.03 100.232 71.272 y n n ruditapes_c14158 1.527 0.03 41.319 63.11 y y y ruditapes2_c3984 -1.486 0.03 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 76.464 51.444 y n n ruditapes_c15153 -1.635 0.03 51.831 31.704 y y y ruditapes2_c800 -1.707 0.03 44.443 26.036 y y y ruditapes2_c1909 -1.944 0.03 30.84 15.862 y y y ruditapes_c8821 -1.954 0.03 30.467 15.593 y y y ruditapes_c27709 -1.964 0.03 serine protease inhibitor 2 30.089 15.319 y y y ruditapes_lrc33658 -2.059 0.03 serine protease inhibitor 2 26.78 13.008 y y y ruditapes_c30558 -2.07 0.03 26.693 12.898 y y y ruditapes_c2314 -2.119 0.03 25.248 11.916 y y y ruditapes2_c1164 -2.132 0.03 novel protein 24.985 11.719 y y y ruditapes_c5223 -2.35 0.03 20.602 8.765 y y y ruditapes_c3448 -2.576 0.03 kallikrein plasma (fletcher factor) 1 17.599 6.831 y y y ruditapes_c20620 -2.602 0.03 17.468 6.713 y y y ruditapes_c5335 -2.691 0.03 16.579 6.161 y y y ruditapes2_c1635 -3.016 0.03 14.114 4.68 y y y ruditapes_c18635 -3.286 0.03 12.835 3.905 y y y ruditapes_c10877 -3.304 0.03 12.683 3.838 y y y ruditapes_c12231 -3.343 0.03 12.562 3.758 y y y ruditapes_c12906 -3.841 0.03 10.903 2.838 y y y ruditapes_c7365 -3.945 0.03 10.701 2.713 y y y ruditapes_c20792 -4.04 0.03 10.415 2.578 y y y ruditapes_c29632 -4.289 0.03 9.925 2.314 y y y ruditapes_lrc13794 -4.448 0.03 9.668 2.174 y y y ruditapes_s37442 -5.189 0.03 8.707 1.678 y y y ruditapes_s40076 -6.177 0.03 7.859 1.272 y y y ruditapes_c16178 -6.743 0.03 7.51 1.114 y y y ruditapes2_c7080 -8.536 0.03 myosin heavy chain /// 0005524 // ATP binding /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0051015 // actin filament binding /// 0005863 // striated muscle thick filament 6.791 0.796 y y y ruditapes_c31647 -9.785 0.03 6.473 0.662 y y y ruditapes2_lrc6027 -12.354 0.03 6.068 0.491 y y y ruditapes_c8064 -1.797 0.031 37.554 20.896 y y y ruditapes_lrc7057 -1.819 0.031 calponin-like protein 36.483 20.055 y y y ruditapes_c8456 -1.878 0.031 33.325 17.745 y y y ruditapes2_c2068 -2.106 0.031 25.221 11.975 y y y ruditapes_c30599 -2.134 0.031 24.674 11.561 y y y ruditapes2_c2237 -2.208 0.031 docking protein 3 22.978 10.406 y y y ruditapes_lrc33519 4.422 0.031 ribosomal protein s24 /// 0030529 // ribonucleoprotein complex 2.142 9.474 y y y ruditapes_c4690 -2.295 0.031 21.396 9.322 y y y ruditapes_c11094 -2.31 0.031 20.96 9.075 y y y ruditapes2_c64 -2.346 0.031 family with sequence similarity member a 20.338 8.668 y y y ruditapes2_c2212 -2.453 0.031 18.918 7.713 y y y ruditapes_c15407 -2.564 0.031 mrna turnover protein 4 homolog /// 0042254 // ribosome biogenesis /// 0005634 // nucleus /// 0005840 // ribosome 17.595 6.861 y y y ruditapes_c19334 -2.735 0.031 15.998 5.849 y y y ruditapes_c31487 -2.808 0.031 15.401 5.486 y y y ruditapes_c20003 -2.816 0.031 15.282 5.428 y y y ruditapes_c28124 -2.93 0.031 14.493 4.946 y y y ruditapes_lrc33579 -2.965 0.031 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 14.361 4.843 y y y ruditapes_c12777 -3.106 0.031 13.565 4.368 y y y ruditapes_c26655 -3.155 0.031 13.29 4.212 y y y ruditapes_c17347 -3.695 0.031 11.14 3.015 y y y ruditapes_c11035 -4.059 0.031 10.256 2.527 y y y ruditapes_c24038 -4.143 0.031 10.167 2.454 y y y ruditapes_lrc24698 -4.42 0.031 9.618 2.176 y y y ruditapes_c14963 -4.448 0.031 9.542 2.146 y y y ruditapes_c29676 -6.354 0.031 7.594 1.195 y y y ruditapes_c30164 1.478 0.032 48.37 71.469 y n n ruditapes2_c2959 -1.617 0.032 52.373 32.39 y y y ruditapes2_lrc3339 -1.631 0.032 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 51.09 31.332 y y y ruditapes_c30208 -1.733 0.032 41.39 23.884 y y y ruditapes_lrc14825 -1.908 0.032 31.561 16.544 y y y ruditapes_c21193 -1.958 0.032 29.744 15.192 y y y ruditapes_c2862 -2.076 0.032 25.874 12.463 y y y ruditapes_c22010 -2.112 0.032 24.971 11.824 y y y ruditapes2_c992 -2.26 0.032 21.756 9.629 y y y ruditapes_c7093 -2.316 0.032 20.668 8.926 y y y ruditapes_c13007 -2.582 0.032 17.287 6.696 y y y ruditapes_lrc35286 -2.646 0.032 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 16.583 6.267 y y y ruditapes_c36135 11.617 0.032 a chain structural consequences of accommodation of four non- cognate amino-acid residues in the s1 pocket of bovine trypsin and chymotrypsin /// 0016787 // hydrolase activity 0.511 5.94 y y y ruditapes_c24652 -3.024 0.032 13.78 4.557 y y y ruditapes_c24745 -3.419 0.032 11.934 3.491 y y y ruditapes_c23005 -4.072 0.032 10.175 2.499 y y y ruditapes_c31797 -1.544 0.033 62.146 40.257 y y y ruditapes_c14542 -1.639 0.033 49.742 30.351 y y y ruditapes_c16651 2.099 0.033 11.495 24.131 y y y ruditapes2_c273 -1.776 0.033 38.078 21.441 y y y ruditapes_lrc34365 -1.851 0.033 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 33.714 18.218 y y y ruditapes_c14956 -1.913 0.033 30.847 16.121 y y y ruditapes_lrc29179 -1.98 0.033 28.337 14.312 y y y ruditapes_c7810 -2.017 0.033 27.118 13.445 y y y ruditapes_c22779 -2.109 0.033 24.622 11.676 y y y ruditapes2_c3627 -2.179 0.033 22.989 10.55 y y y ruditapes2_c2799 -2.185 0.033 22.863 10.462 y y y ruditapes_c16411 -2.193 0.033 22.667 10.338 y y y ruditapes_c7 -2.265 0.033 21.42 9.455 y y y ruditapes_c6689 4.625 0.033 1.931 8.933 y y y ruditapes_c11790 -2.357 0.033 19.885 8.437 y y y ruditapes_c28389 -2.39 0.033 19.263 8.06 y y y ruditapes_c8836 -2.585 0.033 16.934 6.551 y y y ruditapes_c37506 -2.783 0.033 15.238 5.475 y y y ruditapes_c14107 -2.814 0.033 15.049 5.348 y y y ruditapes2_c2671 -2.893 0.033 14.395 4.976 y y y ruditapes2_c2819 -2.974 0.033 13.911 4.678 y y y ruditapes_c31495 -2.974 0.033 13.889 4.67 y y y ruditapes_lrc9565 -3.518 0.033 11.475 3.262 y y y ruditapes2_c1345 -3.887 0.033 10.435 2.685 y y y ruditapes_c29206 -8.717 0.033 6.502 0.746 y y y ruditapes_c6432 -10.872 0.033 6.055 0.557 y y y ruditapes_c31178 -24.461 0.033 5.145 0.21 y y y ruditapes_c3060 -1.548 0.034 61.173 39.528 y y y ruditapes_c25371 -1.749 0.034 39.218 22.422 y y y ruditapes2_c959 -1.778 0.034 37.579 21.133 y y y ruditapes_c2926 -1.821 0.034 34.925 19.177 y y y ruditapes_c20401 -1.93 0.034 29.792 15.432 y y y ruditapes_c13228 -1.935 0.034 29.718 15.356 y y y ruditapes_lrc8121 -2.061 0.034 25.636 12.438 y y y ruditapes_c4589 -2.18 0.034 22.714 10.419 y y y ruditapes_s38725 -2.224 0.034 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 21.764 9.787 y y y ruditapes_c17643 -2.234 0.034 21.542 9.644 y y y ruditapes_c10594 -2.24 0.034 21.596 9.642 y y y ruditapes_c2916 -2.278 0.034 20.867 9.162 y y y ruditapes_c798 -2.718 0.034 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 15.588 5.735 y y y ruditapes_lrc17351 -2.762 0.034 15.2 5.503 y y y ruditapes_c18638 -2.794 0.034 15.026 5.379 y y y ruditapes_c17521 -3.152 0.034 12.889 4.089 y y y ruditapes_c9996 -3.311 0.034 12.139 3.666 y y y ruditapes2_c590 -4.63 0.034 8.953 1.934 y y y ruditapes_c24059 -5.363 0.034 8.126 1.515 y y y ruditapes2_c2045 -6.887 0.034 7.053 1.024 y y y ruditapes2_c432 -8.277 0.034 tnf superfamily ligand tl1a 6.555 0.792 y y y ruditapes_lrc30337 -40.028 0.034 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 4.836 0.121 y y y ruditapes_c1670 -1.602 0.035 52.516 32.782 y y y ruditapes2_c1819 -1.706 0.035 42.259 24.77 y y y ruditapes_c2378 -1.747 0.035 39.039 22.343 y y y ruditapes_lrc10484 -1.836 0.035 33.914 18.468 y y y ruditapes_c19690 -1.863 0.035 voltage-dependent anion channel 1 /// 0007612 // learning /// 0046930 // pore complex /// 0005515 // protein binding /// 0007270 // nerve-nerve synaptic transmission /// 0001662 // behavioral fear response /// 0042645 // mitochondrial nucleoid /// 0005743 // mitochondrial inner membrane /// 0006820 // anion transport /// 0006851 // mitochondrial calcium ion transport /// 0005741 // mitochondrial outer membrane /// 0008308 // voltage-gated anion channel activity 32.532 17.467 y y y ruditapes_c3998 -1.866 0.035 32.303 17.314 y y y ruditapes_c15207 -1.874 0.035 32.04 17.1 y y y ruditapes_c9171 2.603 0.035 cathepsin b precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 6.147 16.003 y y y ruditapes_c165 -1.919 0.035 30.175 15.725 y y y ruditapes_c23173 -2.186 0.035 22.429 10.258 y y y ruditapes2_c1996 -2.194 0.035 22.175 10.108 y y y ruditapes2_c3411 -2.224 0.035 21.581 9.705 y y y ruditapes_c7436 -2.472 0.035 17.781 7.194 y y y ruditapes_c1534 -2.491 0.035 17.586 7.059 y y y ruditapes_c24146 -2.534 0.035 17.053 6.731 y y y ruditapes2_c2011 -2.575 0.035 16.628 6.457 y y y ruditapes_c17226 -2.783 0.035 14.813 5.323 y y y ruditapes_c14872 -2.885 0.035 14.225 4.931 y y y ruditapes_c28035 -2.965 0.035 13.608 4.59 y y y ruditapes_c18752 -3.263 0.035 12.237 3.75 y y y ruditapes_s34990 -4.13 0.035 9.694 2.347 y y y ruditapes_c19756 -4.188 0.035 9.566 2.284 y y y ruditapes2_c5101 -4.7 0.035 heavy polypeptide non-muscle /// 0007409 // axonogenesis /// 0006810 // transport /// 0003774 // motor activity /// 0032559 // adenyl ribonucleotide binding /// 0015629 // actin cytoskeleton /// 0043005 // neuron projection /// 0030239 // myofibril assembly /// 0003779 // actin binding /// 0021591 // ventricular system development /// 0051649 // establishment of localization in cell /// 0005737 // cytoplasm /// 0055013 // cardiac muscle cell development /// 0030902 // hindbrain development /// 0007507 // heart development /// 0044430 // cytoskeletal part /// 0016477 // cell migration 8.71 1.853 y y y ruditapes_c28952 -14.566 0.035 5.491 0.377 y y y ruditapes2_c2423 -1.77 0.036 37.253 21.042 y y y ruditapes_c1033 -1.81 0.036 34.821 19.235 y y y ruditapes_c21041 -1.813 0.036 34.495 19.025 y y y ruditapes_c15293 -1.821 0.036 34.132 18.749 y y y ruditapes_c27781 -1.892 0.036 2500003m10rik protein 30.935 16.35 y y y ruditapes_c16202 -1.946 0.036 28.75 14.775 y y y ruditapes_c27938 -1.984 0.036 27.352 13.788 y y y ruditapes2_c4177 -2.058 0.036 tubulin polymerization-promoting protein family member 3 /// 0002119 // nematode larval development /// 0000003 // reproduction 25.256 12.271 y y y ruditapes_c1176 -2.149 0.036 22.84 10.629 y y y ruditapes_lrc21966 -2.204 0.036 21.815 9.9 y y y ruditapes_c22925 -2.224 0.036 21.437 9.64 y y y ruditapes2_c969 -2.552 0.036 16.729 6.555 y y y ruditapes_c14262 -2.646 0.036 15.782 5.966 y y y ruditapes_c29732 -2.669 0.036 15.606 5.848 y y y ruditapes_lrc35372 -2.753 0.036 14.971 5.439 y y y ruditapes_c13966 -2.865 0.036 repeat organellar 14.139 4.936 y y y ruditapes_c28720 -2.864 0.036 14.11 4.927 y y y ruditapes_c14315 -2.973 0.036 13.433 4.519 y y y ruditapes_c7938 -3.27 0.036 12.003 3.67 y y y ruditapes_lrc34981 -3.328 0.036 prefoldin subunit 1 /// 0005737 // cytoplasm 11.765 3.536 y y y ruditapes_c30902 -3.455 0.036 11.376 3.292 y y y ruditapes_c5334 -3.553 0.036 10.968 3.087 y y y ruditapes_c28906 -3.887 0.036 10.113 2.601 y y y ruditapes2_lrc2969 -3.95 0.036 9.964 2.523 y y y ruditapes_c25628 -4.136 0.036 9.562 2.312 y y y ruditapes_c26631 -4.17 0.036 9.456 2.268 y y y ruditapes2_lrc4920 -4.241 0.036 9.36 2.207 y y y ruditapes_c31873 -4.307 0.036 9.231 2.143 y y y ruditapes_c17194 -5.07 0.036 8.172 1.612 y y y ruditapes_c27730 -5.771 0.036 7.546 1.307 y y y ruditapes_c19215 -6.745 0.036 7.022 1.041 y y y ruditapes_lrc25866 -8.154 0.036 6.404 0.785 y y y ruditapes_c25959 -8.895 0.036 6.219 0.699 y y y ruditapes_lrc35406 -10.007 0.036 cystatin f 5.979 0.597 y y y ruditapes2_c2506 -13.819 0.036 5.479 0.396 y y y ruditapes_c29181 -25.944 0.036 4.953 0.191 y y y ruditapes_c1847 -1.478 0.037 72.228 48.868 y n n ruditapes_c4078 -1.512 0.037 65.412 43.264 y y y ruditapes_c12247 -1.513 0.037 65.026 42.975 y y y ruditapes2_c1205 -1.599 0.037 51.818 32.415 y y y ruditapes_c941 -1.598 0.037 51.796 32.407 y y y ruditapes_lrc32728 2.011 0.037 laminin receptor 1 /// 0034961 // cellular biopolymer biosynthetic process /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0044238 // primary metabolic process /// 0005840 // ribosome /// 0010467 // gene expression 12.54 25.212 y y y ruditapes2_c1768 -1.929 0.037 29.071 15.071 y y y ruditapes_c10678 -2.037 0.037 25.358 12.451 y y y ruditapes_c8666 -2.074 0.037 24.505 11.815 y y y ruditapes_c10916 -2.159 0.037 22.343 10.347 y y y ruditapes_c29918 -2.208 0.037 21.514 9.745 y y y ruditapes_c27208 -2.556 0.037 16.506 6.457 y y y ruditapes_c29923 -2.573 0.037 16.316 6.34 y y y ruditapes_c23740 -4.191 0.037 9.326 2.225 y y y ruditapes_c1099 -5.146 0.037 8.076 1.569 y y y ruditapes2_c1527 -6.288 0.037 7.163 1.139 y y y ruditapes_c21090 -9.213 0.037 6.077 0.66 y y y ruditapes_c18835 1.325 0.038 90.427 119.835 y n n ruditapes_c32201 1.587 0.038 31.327 49.715 y y y ruditapes_c1160 -1.659 0.038 44.712 26.955 y y y ruditapes_c10096 -1.754 0.038 37.525 21.397 y y y ruditapes2_lrc3864 2.266 0.038 tropomyosin 8.657 19.62 y y y ruditapes_c11932 -1.81 0.038 33.952 18.756 y y y ruditapes2_c798 -2.035 0.038 25.255 12.409 y y y ruditapes_c7833 -2.069 0.038 24.442 11.811 y y y ruditapes2_c1529 -2.375 0.038 18.487 7.783 y y y ruditapes_c30411 -2.502 0.038 16.919 6.763 y y y ruditapes_lrc26338 11.782 0.038 0.473 5.578 y y y ruditapes_c560 -2.716 0.038 von willebrand factor c domain containing 2 /// 0005615 // extracellular space /// 0005604 // basement membrane /// 0045666 // positive regulation of neuron differentiation /// 0010811 // positive regulation of cell-substrate adhesion /// 0030514 // negative regulation of BMP signaling pathway /// 0005614 // interstitial matrix 14.953 5.505 y y y ruditapes2_c4845 -2.751 0.038 ribosomal protein l26e /// 0006414 // translational elongation /// 0005829 // cytosol 14.715 5.349 y y y ruditapes_c4580 -2.886 0.038 13.661 4.734 y y y ruditapes_lrc14244 -3.126 0.038 ribosomal protein sa /// 0005840 // ribosome /// 0009987 // cellular process 12.43 3.977 y y y ruditapes_c27597 -3.223 0.038 12.001 3.724 y y y ruditapes_c24873 -3.494 0.038 10.91 3.122 y y y ruditapes_c23642 -5.458 0.038 7.67 1.405 y y y ruditapes_c28115 -6.671 0.038 6.907 1.035 y y y ruditapes_s38425 -7.587 0.038 6.485 0.855 y y y ruditapes_c10885 -8.599 0.038 6.162 0.717 y y y ruditapes_c7500 -11.602 0.038 5.599 0.483 y y y ruditapes2_c4162 -1.229 0.039 236.628 192.488 y n n ruditapes2_c3518 1.474 0.039 nascent polypeptide-associated complex subunit alpha /// 0003713 // transcription coactivator activity /// 0006350 // transcription /// 0005634 // nucleus /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0016787 // hydrolase activity /// 0017025 // TATA-binding protein binding 45.567 67.146 y n n ruditapes2_c199 -1.401 0.039 93.375 66.671 y n n ruditapes_c5485 -1.462 0.039 74.672 51.086 y n n ruditapes2_lrc3293 -1.484 0.039 calmodulin /// 0006810 // transport /// 0007275 // multicellular organismal development /// 0016056 // rhodopsin mediated signaling pathway /// 0046872 // metal ion binding /// 0016043 // cellular component organization /// 0000003 // reproduction /// 0005819 // spindle /// 0009586 // rhodopsin mediated phototransduction /// 0042995 // cell projection /// 0007610 // behavior /// 0005737 // cytoplasm /// 0007049 // cell cycle /// 0009966 // regulation of signal transduction /// 0008092 // cytoskeletal protein binding /// 0016301 // kinase activity 69.103 46.558 y n n ruditapes2_lrc5556 -1.668 0.039 40s ribosomal protein s14 /// 0030529 // ribonucleoprotein complex 43.469 26.063 y y y ruditapes_c24783 -1.861 0.039 31.111 16.718 y y y ruditapes_c3583 -1.975 0.039 26.778 13.559 y y y ruditapes_c27409 -2.022 0.039 25.457 12.587 y y y ruditapes_lrc38572 3.373 0.039 ribosomal protein s18 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006417 // regulation of translation 3.294 11.109 y y y ruditapes_c16010 -2.657 0.039 15.272 5.749 y y y ruditapes_c15759 -2.717 0.039 14.792 5.445 y y y ruditapes_c29771 -2.91 0.039 aldo keto reductase /// 0055114 // oxidation reduction /// 0016491 // oxidoreductase activity 13.388 4.601 y y y ruditapes_c12902 -3.029 0.039 12.699 4.193 y y y ruditapes_c26408 -3.218 0.039 gene model 11.852 3.683 y y y ruditapes_c9797 -4.881 0.039 8.16 1.672 y y y ruditapes_c1925 -8.117 0.039 6.249 0.77 y y y ruditapes_lrc33516 -1.349 0.04 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 115.052 85.261 y n n ruditapes2_lrc4355 -1.375 0.04 102.45 74.494 y n n ruditapes2_c1331 1.503 0.04 ribosomal protein l12e /// 0005811 // lipid particle /// 0030529 // ribonucleoprotein complex /// 0000022 // mitotic spindle elongation 40.492 60.842 y y y ruditapes_c9685 -1.679 0.04 42.29 25.191 y y y ruditapes_c32081 -1.709 0.04 39.677 23.212 y y y ruditapes_c14591 -1.79 0.04 34.578 19.319 y y y ruditapes_c19217 -1.809 0.04 33.483 18.506 y y y ruditapes_c12656 -1.923 0.04 28.507 14.825 y y y ruditapes2_c1059 -2.214 0.04 prolyl-trna synthetase associated protein 20.761 9.379 y y y ruditapes_c19514 -2.265 0.04 19.855 8.766 y y y ruditapes2_c137 -2.288 0.04 mannose c type 1 19.345 8.455 y y y ruditapes_c18294 -2.454 0.04 17.164 6.995 y y y ruditapes_lrc15105 -2.457 0.04 17.122 6.968 y y y ruditapes_c22134 -2.462 0.04 17.001 6.904 y y y ruditapes_c14664 -2.562 0.04 16.027 6.255 y y y ruditapes_c16239 -2.647 0.04 15.214 5.749 y y y ruditapes2_lrc3757 -2.73 0.04 14.543 5.327 y y y ruditapes_c11867 -2.794 0.04 14.076 5.038 y y y ruditapes2_lrc6086 -2.828 0.04 alpha 3 type vi collagen isoform 1 precursor /// 0005578 // proteinaceous extracellular matrix 13.854 4.899 y y y ruditapes_c3812 -3.046 0.04 12.566 4.126 y y y ruditapes_c11215 -3.089 0.04 12.383 4.009 y y y ruditapes_c20167 -3.171 0.04 11.955 3.77 y y y ruditapes_c27105 -3.293 0.04 11.446 3.476 y y y ruditapes2_lrc5554 -3.351 0.04 ribosomal protein l32 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 11.212 3.345 y y y ruditapes_c29287 -4.198 0.04 9.024 2.15 y y y ruditapes_c4234 -4.292 0.04 8.941 2.083 y y y ruditapes_lrc18606 -4.37 0.04 8.766 2.006 y y y ruditapes2_c2527 -4.759 0.04 8.223 1.728 y y y ruditapes2_c2739 -6.857 0.04 6.631 0.967 y y y ruditapes_c28858 -10.841 0.04 5.602 0.517 y y y ruditapes_c3806 -1.576 0.041 52.407 33.255 y y y ruditapes2_c1528 -1.593 0.041 50.367 31.622 y y y ruditapes_c15193 -1.959 0.041 26.744 13.653 y y y ruditapes_c15893 -2.007 0.041 25.237 12.573 y y y ruditapes_c211 -2.01 0.041 25.214 12.545 y y y ruditapes2_c1740 -2.194 0.041 20.902 9.525 y y y ruditapes_lrc29886 -2.424 0.041 17.27 7.123 y y y ruditapes_lrc13574 -2.599 0.041 15.443 5.941 y y y ruditapes_c8192 -2.681 0.041 14.732 5.494 y y y ruditapes_c30531 -2.772 0.041 14.044 5.066 y y y ruditapes_c19291 -2.956 0.041 12.898 4.363 y y y ruditapes_c30248 -3.185 0.041 11.749 3.688 y y y ruditapes_c17794 -3.697 0.041 10.06 2.721 y y y ruditapes_c1675 -4.089 0.041 9.146 2.237 y y y ruditapes2_c2686 -5.155 0.041 7.685 1.491 y y y ruditapes_c4295 -6.918 0.041 6.528 0.944 y y y ruditapes_c21701 -7.413 0.041 6.378 0.86 y y y ruditapes2_c848 -1.457 0.042 cathepsin b /// 0016324 // apical plasma membrane /// 0005576 // extracellular region /// 0005739 // mitochondrion /// 0006508 // proteolysis /// 0042277 // peptide binding /// 0009897 // external side of plasma membrane /// 0005764 // lysosome /// 0005625 // soluble fraction /// 0009611 // response to wounding /// 0030984 // kininogen binding /// 0050790 // regulation of catalytic activity /// 0004197 // cysteine-type endopeptidase activity 73.662 50.545 y n n ruditapes_c1143 -1.507 0.042 62.899 41.728 y y y ruditapes2_lrc3999 -1.586 0.042 51.044 32.184 y y y ruditapes_c13071 -1.848 0.042 30.773 16.655 y y y ruditapes_lrc36530 -1.866 0.042 histone /// 0005811 // lipid particle /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0005700 // polytene chromosome /// 0000786 // nucleosome 30.212 16.193 y y y ruditapes_c31565 -1.96 0.042 26.59 13.567 y y y ruditapes_c4865 -2.263 0.042 19.383 8.567 y y y ruditapes_c11875 -2.333 0.042 18.393 7.884 y y y ruditapes_c4507 -2.399 0.042 17.543 7.313 y y y ruditapes_c1149 -2.428 0.042 17.104 7.046 y y y ruditapes_c3153 -2.473 0.042 16.658 6.736 y y y ruditapes_c9775 -2.562 0.042 15.697 6.128 y y y ruditapes_c25697 -2.592 0.042 15.34 5.919 y y y ruditapes_c8052 -2.665 0.042 predicted protein [Nematostella vectensis] 14.742 5.533 y y y ruditapes_c17053 -2.72 0.042 14.297 5.256 y y y ruditapes_lrc23464 -2.812 0.042 13.608 4.84 y y y ruditapes_lrc11499 -2.827 0.042 13.598 4.81 y y y ruditapes_c8100 -3.574 0.042 10.313 2.886 y y y ruditapes_c9386 -4.017 0.042 9.237 2.299 y y y ruditapes_c19847 -4.071 0.042 9.146 2.246 y y y ruditapes_c16069 -4.114 0.042 9.038 2.197 y y y ruditapes_c21111 -4.109 0.042 9.005 2.191 y y y ruditapes_c19726 -4.33 0.042 8.635 1.994 y y y ruditapes_c11117 -4.751 0.042 8.047 1.694 y y y ruditapes_c22380 -5.401 0.042 7.442 1.378 y y y ruditapes_c13190 -8.895 0.042 5.839 0.656 y y y ruditapes2_c119 -1.376 0.043 98.836 71.829 y n n ruditapes_c10019 -1.489 0.043 65.439 43.951 y n n ruditapes2_c2790 -1.493 0.043 64.987 43.541 y n n ruditapes_c25424 -1.577 0.043 51.406 32.604 y y y ruditapes_c2278 -1.703 0.043 39.092 22.955 y y y ruditapes_c3026 -1.741 0.043 36.584 21.018 y y y ruditapes_c10100 -1.84 0.043 31.046 16.872 y y y ruditapes_c28466 -2.028 0.043 24.154 11.91 y y y ruditapes_c7663 -2.062 0.043 23.361 11.33 y y y ruditapes_c27272 -2.148 0.043 21.449 9.986 y y y ruditapes_c20748 -2.194 0.043 20.491 9.341 y y y ruditapes2_lrc4084 4.633 0.043 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 1.736 8.043 y y y ruditapes_c14398 -2.334 0.043 18.162 7.782 y y y ruditapes_lrc32393 -2.422 0.043 17.034 7.033 y y y ruditapes_c691 -2.434 0.043 spi1_craviserine protease inhibitor cvsi-1 precursor 16.908 6.947 y y y ruditapes_c8516 -2.649 0.043 14.687 5.545 y y y ruditapes_c24198 -2.698 0.043 14.274 5.29 y y y ruditapes_c21767 -2.822 0.043 13.499 4.784 y y y ruditapes_c20235 -3.742 0.043 9.772 2.612 y y y ruditapes2_lrc7249 -4.383 0.043 8.522 1.944 y y y ruditapes_lrc33246 -4.79 0.043 7.974 1.665 y y y ruditapes2_lrc6961 -11.119 0.043 5.427 0.488 y y y ruditapes2_c1008 -1.229 0.044 laminin receptor 1 /// 0030855 // epithelial cell differentiation /// 0006414 // translational elongation /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0016337 // cell-cell adhesion /// 0043025 // cell soma /// 0005055 // laminin receptor activity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0005604 // basement membrane /// 0043022 // ribosome binding 227.28 184.988 y n n ruditapes_c3911 -1.372 0.044 99.387 72.453 y n n ruditapes2_c1231 -1.577 0.044 50.864 32.251 y y y ruditapes_c28338 -1.805 0.044 32.469 17.99 y y y ruditapes_c19381 -1.83 0.044 31.23 17.063 y y y ruditapes_c5624 -2.04 0.044 23.63 11.584 y y y ruditapes_c27871 -2.282 0.044 18.813 8.243 y y y ruditapes_c6405 -2.793 0.044 13.528 4.843 y y y ruditapes_c5455 -2.973 0.044 12.479 4.197 y y y ruditapes_c16434 -3.007 0.044 12.202 4.058 y y y ruditapes_c5732 -3.152 0.044 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 11.569 3.67 y y y ruditapes_s38003 -3.49 0.044 10.367 2.971 y y y ruditapes_c31030 -5.232 0.044 7.411 1.416 y y y ruditapes_c4937 -7.672 0.044 6.083 0.793 y y y ruditapes_s39529 -11.786 0.044 5.252 0.446 y y y ruditapes_c23267 -1.344 0.045 112.166 83.472 y n n ruditapes_c3354 -1.513 0.045 59.77 39.494 y y y ruditapes2_c101 -1.516 0.045 high-mobility group box 3 /// 0007275 // multicellular organismal development 59.269 39.104 y y y ruditapes_c20965 -1.534 0.045 56.521 36.836 y y y ruditapes_lrc38746 1.957 0.045 tubulin alpha-1 chain /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 12.784 25.014 y y y ruditapes2_c2862 -1.687 0.045 39.63 23.492 y y y ruditapes_lrc35570 2.277 0.045 laminin receptor 1 /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0004872 // receptor activity 7.963 18.134 y y y ruditapes_c4645 -1.824 0.045 31.178 17.089 y y y ruditapes_c21855 -1.853 0.045 29.777 16.068 y y y ruditapes_c13981 -1.908 0.045 27.478 14.401 y y y ruditapes_c21146 -1.971 0.045 25.395 12.886 y y y ruditapes_lrc35028 3.885 0.045 2.352 9.137 y y y ruditapes_c11699 -2.369 0.045 17.418 7.352 y y y ruditapes2_c3418 5.272 0.045 atp:adp antiporter /// 0006810 // transport /// 0005215 // transporter activity /// 0005488 // binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 1.378 7.266 y y y ruditapes_lrc35671 6.503 0.045 0.993 6.459 y y y ruditapes_c3253 9.743 0.045 nadh dehydrogenase 1 beta 19kda 0.563 5.488 y y y ruditapes_c8874 -2.665 0.045 14.291 5.363 y y y ruditapes_c7929 -2.883 0.045 12.799 4.439 y y y ruditapes_c27269 -3.202 0.045 11.225 3.505 y y y ruditapes_c24173 -3.462 0.045 10.343 2.987 y y y ruditapes_c10661 -3.5 0.045 10.253 2.929 y y y ruditapes2_c1134 -3.51 0.045 10.145 2.89 y y y ruditapes_c23587 -3.716 0.045 9.661 2.6 y y y ruditapes_c21023 -3.916 0.045 9.161 2.339 y y y ruditapes_c9140 -3.945 0.045 9.118 2.311 y y y ruditapes_c29093 -4.114 0.045 8.813 2.142 y y y ruditapes_c22885 -4.404 0.045 8.294 1.883 y y y ruditapes_c24804 -6.595 0.045 6.48 0.983 y y y ruditapes_c20797 -8.061 0.045 5.926 0.735 y y y ruditapes_c30324 -8.524 0.045 5.803 0.681 y y y ruditapes_lrc6879 -11.366 0.045 5.274 0.464 y y y ruditapes_c29560 -20.014 0.045 4.664 0.233 y y y ruditapes_c292 -1.467 0.046 68.112 46.426 y n y ruditapes_c27885 -1.668 0.046 40.606 24.347 y y y ruditapes2_c701 -2.122 0.046 21.404 10.088 y y y ruditapes2_c315 -2.145 0.046 prefoldin subunit 2 /// 0016272 // prefoldin complex /// 0051082 // unfolded protein binding /// 0006457 // protein folding 20.765 9.682 y y y ruditapes_c11251 -2.204 0.046 19.637 8.909 y y y ruditapes_c26712 -2.584 0.046 14.924 5.775 y y y ruditapes_c15992 -2.817 0.046 13.09 4.647 y y y ruditapes_c23894 -2.835 0.046 13.023 4.595 y y y ruditapes2_lrc3545 -3.011 0.046 fkbp-type peptidyl-prolyl cis-trans isomerase /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 11.985 3.98 y y y ruditapes_c14319 -3.217 0.046 11.094 3.449 y y y ruditapes_c22449 -3.377 0.046 10.482 3.104 y y y ruditapes_c5495 -3.445 0.046 10.244 2.974 y y y ruditapes_c11333 -3.801 0.046 ataxin-2-like protein 9.318 2.451 y y y ruditapes2_c3799 -3.937 0.046 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0048046 // apoplast /// 0005739 // mitochondrion /// 0006096 // glycolysis /// 0005886 // plasma membrane /// 0009570 // chloroplast stroma /// 0005829 // cytosol /// 0006098 // pentose-phosphate shunt /// 0006094 // gluconeogenesis /// 0046686 // response to cadmium ion /// 0009651 // response to salt stress /// 0005618 // cell wall 9.003 2.287 y y y ruditapes_c3702 -4.291 0.046 8.42 1.962 y y y ruditapes_c20918 -5.303 0.046 7.194 1.357 y y y ruditapes2_c3904 -1.499 0.047 61.057 40.726 y n y ruditapes_c10006 -1.741 0.047 35.163 20.201 y y y ruditapes2_c759 -1.846 0.047 tubulin polymerization-promoting protein family member 3 29.607 16.039 y y y ruditapes_c4796 -1.866 0.047 28.72 15.39 y y y ruditapes_c29779 -1.895 0.047 27.692 14.614 y y y ruditapes_lrc17046 -1.986 0.047 24.584 12.382 y y y ruditapes_c5063 -2.547 0.047 15.02 5.897 y y y ruditapes2_lrc3741 7.783 0.047 0.751 5.844 y y y ruditapes_c10144 -2.637 0.047 14.355 5.443 y y y ruditapes_c2365 -2.641 0.047 14.241 5.392 y y y ruditapes_c16038 -2.911 0.047 12.474 4.285 y y y ruditapes2_c387 -2.955 0.047 12.202 4.13 y y y ruditapes_lrc20384 -2.965 0.047 12.103 4.082 y y y ruditapes_c7512 -3.16 0.047 11.255 3.562 y y y ruditapes_c16982 -3.442 0.047 10.175 2.956 y y y ruditapes_c10669 -3.749 0.047 9.408 2.51 y y y ruditapes_c16504 -3.775 0.047 sphingomyelin phosphodiesterase 9.317 2.468 y y y ruditapes_c2459 -3.991 0.047 8.876 2.224 y y y ruditapes_c26596 -5.308 0.047 7.167 1.35 y y y ruditapes_c20394 -5.331 0.047 7.152 1.342 y y y ruditapes_c9202 -9.173 0.047 5.551 0.605 y y y ruditapes_lrc35643 -13.545 0.047 4.97 0.367 y y y ruditapes_lrc11874 -20.014 0.047 4.602 0.23 y y y ruditapes_c3784 1.62 0.048 25.901 41.956 y y y ruditapes_c15178 -1.515 0.048 58.042 38.324 y y y ruditapes2_c3098 -1.743 0.048 protein /// 0044237 // cellular metabolic process 34.666 19.894 y y y ruditapes_c7715 -1.77 0.048 33.195 18.756 y y y ruditapes_c25470 -1.865 0.048 28.538 15.303 y y y ruditapes_lrc32780 2.765 0.048 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 4.67 12.912 y y y ruditapes_lrc32206 -2.084 0.048 21.765 10.445 y y y ruditapes_c10108 -2.129 0.048 20.711 9.728 y y y ruditapes_c27164 -2.166 0.048 20.044 9.254 y y y ruditapes_c12822 -2.301 0.048 17.729 7.706 y y y ruditapes_c26264 -3.224 0.048 10.85 3.365 y y y ruditapes_c3717 -3.226 0.048 10.828 3.356 y y y ruditapes_c25929 -3.597 0.048 9.631 2.677 y y y ruditapes_s38260 -4.064 0.048 ribosomal protein l35a /// 0009987 // cellular process /// 0005622 // intracellular 8.668 2.133 y y y ruditapes_c8062 -4.658 0.048 7.781 1.67 y y y ruditapes_c20108 -4.691 0.048 7.716 1.645 y y y ruditapes_lrc12014 -4.906 0.048 7.456 1.52 y y y ruditapes_c27547 -6.282 0.048 6.458 1.028 y y y ruditapes_c5969 -8.524 0.048 5.606 0.658 y y y ruditapes2_lrc3243 -11.754 0.048 5.098 0.434 y y y ruditapes_lrc33833 -28.464 0.048 4.336 0.152 y y y ruditapes2_c500 -1.408 0.049 82.341 58.483 y n y ruditapes_c14971 -1.652 0.049 41.173 24.925 y y y ruditapes_lrc33453 -1.914 0.049 ribosomal protein l9 /// 0030529 // ribonucleoprotein complex 26.375 13.777 y y y ruditapes2_c2265 -1.93 0.049 25.913 13.428 y y y ruditapes_c13352 -1.976 0.049 24.417 12.356 y y y ruditapes_lrc32531 -1.985 0.049 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 24.147 12.164 y y y ruditapes_c30103 -2.094 0.049 21.387 10.212 y y y ruditapes_c16637 -2.132 0.049 20.454 9.596 y y y ruditapes2_c2823 -2.19 0.049 19.491 8.9 y y y ruditapes_c29366 -2.274 0.049 17.993 7.914 y y y ruditapes_c21403 -2.625 0.049 14.178 5.4 y y y ruditapes2_c2897 -2.793 0.049 12.951 4.637 y y y ruditapes_lrc34795 -2.814 0.049 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 12.742 4.529 y y y ruditapes_c17554 -3.079 0.049 11.35 3.686 y y y ruditapes_lrc8973 -3.876 0.049 8.946 2.308 y y y ruditapes_c17842 -4.81 0.049 7.524 1.564 y y y ruditapes_c25461 -5.671 0.049 6.768 1.193 y y y ruditapes_lrc31263 -17.79 0.049 4.602 0.259 y y y ruditapes_c478 -22.979 0.049 4.444 0.193 y y y ruditapes_c2265 -1.5 0.05 59.45 39.626 y y y ruditapes_lrc18028 -1.69 0.05 37.441 22.152 y y y ruditapes_c25056 -1.695 0.05 37.122 21.902 y y y ruditapes_c9251 -1.727 0.05 35.081 20.309 y y y ruditapes2_c1359 -1.902 0.05 26.513 13.936 y y y ruditapes_c33910 -2.385 0.05 histone h2a /// 0005694 // chromosome 16.436 6.891 y y y ruditapes_c1553 -2.559 0.05 14.607 5.709 y y y ruditapes2_c2453 -2.725 0.05 13.3 4.881 y y y ruditapes_c8289 -2.785 0.05 12.846 4.613 y y y ruditapes_c5945 -3.212 0.05 10.722 3.338 y y y ruditapes_lrc25172 -3.547 0.05 9.66 2.723 y y y ruditapes2_lrc5464 -3.558 0.05 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 9.568 2.689 y y y ruditapes_c13141 -3.812 0.05 8.951 2.348 y y y ruditapes2_c4090 -4.231 0.05 8.197 1.937 y y y ruditapes_c35878 -4.419 0.05 proteasome ( macropain) 26s 1 /// 0005634 // nucleus /// 0005488 // binding /// 0030163 // protein catabolic process /// 0051439 // regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0016787 // hydrolase activity 7.926 1.794 y y y ruditapes_c24037 -4.892 0.05 7.382 1.509 y y y ruditapes_lrc23674 -5.524 0.05 6.788 1.229 y y y ruditapes_lrc17894 -6.938 0.05 6.043 0.871 y y y ruditapes_c9692 -7.227 0.05 5.923 0.82 y y y ruditapes2_lrc5930 -1.451 0.051 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 68.884 47.49 y n y ruditapes_c687 -1.514 0.051 56.637 37.404 y y y ruditapes2_c1716 -1.59 0.051 46.295 29.11 y y y ruditapes2_c6040 1.832 0.051 15.275 27.98 y y y ruditapes_c30124 -1.715 0.051 35.51 20.7 y y y ruditapes_c21786 -2.06 0.051 21.653 10.512 y y y ruditapes_c17108 -2.076 0.051 21.391 10.306 y y y ruditapes_c21917 -2.352 0.051 16.722 7.111 y y y ruditapes_c30496 -2.675 0.051 13.517 5.054 y y y ruditapes_c11163 -3.241 0.051 10.541 3.252 y y y ruditapes_c16999 -3.336 0.051 10.162 3.047 y y y ruditapes_c23373 -3.362 0.051 10.072 2.996 y y y ruditapes_c13648 -4.562 0.051 7.651 1.677 y y y ruditapes_c19252 -5.595 0.051 6.677 1.193 y y y ruditapes_c26516 -6.857 0.051 6.025 0.879 y y y ruditapes_c7464 -7.076 0.051 5.926 0.838 y y y ruditapes_c4363 -7.363 0.051 5.837 0.793 y y y ruditapes_c10037 -19.643 0.051 4.438 0.226 y y y ruditapes_c10561 -1.418 0.052 76.701 54.073 y n y ruditapes_lrc25552 -1.64 0.052 cytochrome somatic /// 0042981 // regulation of apoptosis /// 0022900 // electron transport chain /// 0044429 // mitochondrial part /// 0009055 // electron carrier activity /// 0005506 // iron ion binding 41.054 25.034 y y y ruditapes2_lrc4546 2.297 0.052 histone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0001740 // Barr body /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0010171 // body morphogenesis /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape /// 0009792 // embryonic development ending in birth or egg hatching /// 0000786 // nucleosome 7.289 16.74 y y y ruditapes2_c19 3.451 0.052 40s ribosomal protein s2 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005654 // nucleoplasm /// 0003723 // RNA binding /// 0048604 // fibroblast growth factor 3 binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0048602 // fibroblast growth factor 1 binding 2.784 9.609 y y y ruditapes2_c892 -2.119 0.052 20.234 9.549 y y y ruditapes_c11444 -2.17 0.052 19.205 8.851 y y y ruditapes2_c3481 -2.208 0.052 18.561 8.406 y y y ruditapes_lrc38300 5.465 0.052 1.216 6.646 y y y ruditapes_c15679 -2.567 0.052 14.293 5.568 y y y ruditapes_c19910 -4.089 0.052 8.328 2.037 y y y ruditapes_c4359 -1.435 0.053 71.66 49.938 y n y ruditapes2_c548 -1.644 0.053 40.238 24.48 y y y ruditapes_c4538 -1.906 0.053 25.703 13.485 y y y ruditapes_c357 -1.984 0.053 23.239 11.715 y y y ruditapes2_c2330 -2.518 0.053 14.619 5.805 y y y ruditapes_c7131 -2.533 0.053 gamma-aminobutyric acid receptor-associated protein /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0005875 // microtubule associated complex /// 0005886 // plasma membrane /// 0015629 // actin cytoskeleton /// 0005764 // lysosome /// 0005874 // microtubule /// 0008017 // microtubule binding /// 0000226 // microtubule cytoskeleton organization /// 0004872 // receptor activity 14.381 5.678 y y y ruditapes_c6400 -2.572 0.053 14.09 5.479 y y y ruditapes_lrc16361 -2.666 0.053 13.349 5.008 y y y ruditapes_c29242 -2.692 0.053 13.1 4.866 y y y ruditapes_c1517 -2.909 0.053 11.811 4.06 y y y ruditapes_c24211 -3.849 0.053 8.694 2.259 y y y ruditapes_c31729 -4.077 0.053 8.272 2.029 y y y ruditapes_c19876 -1.483 0.054 60.419 40.737 y n y ruditapes_c30873 -1.588 0.054 45.234 28.478 y y y ruditapes_c16871 -1.63 0.054 41.056 25.193 y y y ruditapes2_lrc4623 -1.788 0.054 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 30.402 17 y y y ruditapes_c9456 -1.796 0.054 30.126 16.773 y y y ruditapes_c3576 -1.831 0.054 28.395 15.512 y y y ruditapes_c18485 -1.914 0.054 25.386 13.266 y y y ruditapes2_c121 -2.197 0.054 tropomyosin 18.518 8.428 y y y ruditapes_c20542 -2.224 0.054 18.029 8.107 y y y ruditapes2_c822 -2.237 0.054 17.886 7.994 y y y ruditapes_c23223 -2.273 0.054 17.308 7.615 y y y ruditapes_c24229 -2.357 0.054 16.24 6.891 y y y ruditapes_c9524 -2.49 0.054 14.733 5.917 y y y ruditapes_c10127 -2.531 0.054 14.372 5.677 y y y ruditapes_c10865 -2.663 0.054 13.232 4.969 y y y ruditapes_c11774 -2.751 0.054 12.588 4.575 y y y ruditapes2_c1484 -3.198 0.054 10.444 3.266 y y y ruditapes_c2851 -3.207 0.054 10.384 3.237 y y y ruditapes2_c5486 -3.343 0.054 ribosomal protein s3a /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0006413 // translational initiation /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 9.898 2.961 y y y ruditapes_c5447 -3.429 0.054 9.606 2.801 y y y ruditapes_c24568 -3.477 0.054 9.532 2.741 y y y ruditapes_c30920 -4.067 0.054 8.163 2.007 y y y ruditapes_c7763 -4.351 0.054 7.739 1.779 y y y ruditapes_c24482 -4.818 0.054 7.173 1.489 y y y ruditapes2_lrc4716 -4.861 0.054 loc567151 protein /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0005829 // cytosol /// 0005792 // microsome 7.153 1.471 y y y ruditapes_c25488 -5.138 0.054 6.87 1.337 y y y ruditapes_lrc34567 -8.895 0.054 5.277 0.593 y y y ruditapes_c8013 -10.702 0.054 4.963 0.464 y y y ruditapes_c9810 -1.553 0.055 49.071 31.591 y y y ruditapes2_c732 -1.562 0.055 48.025 30.74 y y y ruditapes_c3303 -1.83 0.055 28.151 15.381 y y y ruditapes_c23254 -1.902 0.055 25.544 13.427 y y y ruditapes2_c356 4.663 0.055 ppig protein /// 0005634 // nucleus 1.55 7.229 y y y ruditapes_c13836 -2.311 0.055 16.656 7.207 y y y ruditapes2_c2382 -2.338 0.055 orf msv234 hypthetical protein 16.266 6.958 y y y ruditapes2_c134 -2.513 0.055 trove domain member 2 14.329 5.702 y y y ruditapes_c14697 -3.122 0.055 protein 10.661 3.415 y y y ruditapes_c32093 -3.122 0.055 10.645 3.41 y y y ruditapes_lrc34844 -3.384 0.055 9.691 2.864 y y y ruditapes_c9450 -4.523 0.055 7.459 1.649 y y y ruditapes_lrc33080 1.605 0.056 tubulin alpha-1 chain "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 25.26 40.539 y y y ruditapes_lrc34733 1.663 0.056 21.603 35.934 y y y ruditapes2_c2344 -1.617 0.056 41.818 25.869 y y y ruditapes2_c1919 -1.742 0.056 32.36 18.572 y y y ruditapes_c5184 -1.831 0.056 28.058 15.326 y y y ruditapes_c7637 -1.953 0.056 tektin 2 /// 0005856 // cytoskeleton /// 0016043 // cellular component organization /// 0042995 // cell projection /// 0006928 // cell motion 23.6 12.082 y y y ruditapes_c12504 -1.971 0.056 23.062 11.699 y y y ruditapes_c28242 -2.084 0.056 20.384 9.78 y y y ruditapes_c27988 -2.105 0.056 19.805 9.41 y y y ruditapes_c18862 -2.136 0.056 19.294 9.032 y y y ruditapes_c27055 -2.147 0.056 19.118 8.904 y y y ruditapes_c10888 -2.197 0.056 18.222 8.295 y y y ruditapes_c4102 -2.672 0.056 13.005 4.866 y y y ruditapes_c22100 -2.802 0.056 12.131 4.329 y y y ruditapes_c24992 -2.943 0.056 11.341 3.854 y y y ruditapes_c24100 -3.046 0.056 10.895 3.577 y y y ruditapes_c10107 -3.077 0.056 10.738 3.49 y y y ruditapes_lrc34369 -4.593 0.056 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 7.331 1.596 y y y ruditapes2_lrc6676 -5.059 0.056 6.856 1.355 y y y ruditapes_c28458 -9.848 0.056 4.995 0.507 y y y ruditapes_lrc34887 -1.561 0.057 47.432 30.382 y y y ruditapes_c8031 -1.683 0.057 36.048 21.417 y y y ruditapes_c17096 -1.714 0.057 33.793 19.72 y y y ruditapes2_c1414 -1.746 0.057 glioma tumor suppressor candidate region gene 2 32.002 18.331 y y y ruditapes_c14524 -1.84 0.057 27.435 14.911 y y y ruditapes_c15268 -1.97 0.057 sperm flagellar 2 22.997 11.673 y y y ruditapes_c15758 -2.002 0.057 22.074 11.026 y y y ruditapes_c8777 -2.03 0.057 21.42 10.553 y y y ruditapes_c26215 -2.437 0.057 14.91 6.117 y y y ruditapes_c10680 -2.773 0.057 12.208 4.402 y y y ruditapes_c29493 -2.792 0.057 12.037 4.311 y y y ruditapes_c16211 -2.832 0.057 11.838 4.179 y y y ruditapes_c1020 -3.123 0.057 10.438 3.342 y y y ruditapes_c31347 -3.476 0.057 9.248 2.661 y y y ruditapes_c26623 -3.791 0.057 8.504 2.243 y y y ruditapes2_lrc7362 -4.069 0.057 7.967 1.958 y y y ruditapes_c11734 -4.219 0.057 7.73 1.832 y y y ruditapes_c23497 -4.448 0.057 7.423 1.669 y y y ruditapes_c24570 -5.518 0.057 6.44 1.167 y y y ruditapes_c7653 -6.365 0.057 5.939 0.933 y y y ruditapes_c21846 -6.671 0.057 5.777 0.866 y y y ruditapes_lrc25848 -6.671 0.057 5.765 0.864 y y y ruditapes2_c722 -7.698 0.057 5.427 0.705 y y y ruditapes_c24352 -73.384 0.057 3.767 0.051 y y y ruditapes_c16168 -1.296 0.058 127.911 98.668 y n y ruditapes2_c80 -1.605 0.058 42.186 26.283 y y y ruditapes_c24320 -1.754 0.058 31.302 17.845 y y y ruditapes_c15506 -1.851 0.058 26.801 14.48 y y y ruditapes2_c2561 -1.923 0.058 24.158 12.561 y y y ruditapes2_c3115 -2.24 0.058 17.245 7.697 y y y ruditapes_c10336 -2.298 0.058 16.413 7.142 y y y ruditapes_c16036 -2.337 0.058 fch domain only 2 15.967 6.833 y y y ruditapes_c6770 -2.431 0.058 14.799 6.088 y y y ruditapes_c607 -2.822 0.058 11.847 4.199 y y y ruditapes_c22753 -3.41 0.058 9.409 2.759 y y y ruditapes_c863 -3.974 0.058 8.094 2.037 y y y ruditapes_c4077 -5.718 0.058 6.257 1.094 y y y ruditapes_c2038 -7.088 0.058 mitochondrial ribosomal protein l17 5.588 0.788 y y y ruditapes_c6093 -10.166 0.058 4.851 0.477 y y y ruditapes_c31433 -? 0.058 3.595 0 y y y ruditapes2_c215 2.347 0.059 60s acidic ribosomal protein p2 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 6.466 15.175 y y y ruditapes2_c2593 -1.836 0.059 histone h2a /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 27.06 14.739 y y y ruditapes_c3043 -2.196 0.059 17.723 8.07 y y y ruditapes_c22950 -2.231 0.059 17.275 7.742 y y y ruditapes_c7698 -2.274 0.059 f5 8 type c domain protein 16.605 7.302 y y y ruditapes2_c6871 6.607 0.059 0.857 5.66 y y y ruditapes2_c3215 -2.534 0.059 nadh dehydrogenase flavoprotein 2 "/// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0046872 // metal ion binding /// 0007399 // nervous system development /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0048738 // cardiac muscle tissue development /// 0009055 // electron carrier activity /// 0051536 // iron-sulfur cluster binding" 13.796 5.445 y y y ruditapes_c21657 -2.547 0.059 13.622 5.348 y y y ruditapes_c15049 -3.093 0.059 10.442 3.376 y y y ruditapes_lrc35995 -4.289 0.059 nadh dehydrogenase 1 beta 8kda 7.517 1.753 y y y ruditapes_c15544 -4.334 0.059 7.45 1.719 y y y ruditapes2_c2209 -4.517 0.059 7.215 1.597 y y y ruditapes_c6529 -4.84 0.059 6.888 1.423 y y y ruditapes2_c2877 -5.21 0.059 6.524 1.252 y y y ruditapes_c25154 -10.166 0.059 4.813 0.473 y y y ruditapes_lrc34958 1.509 0.06 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 33.094 49.939 y y y ruditapes_lrc32481 -1.442 0.06 66.136 45.857 y n y ruditapes_c11090 -1.47 0.06 60.088 40.889 y n y ruditapes2_c3228 -1.546 0.06 glutathione peroxidase 3 /// 0006749 // glutathione metabolic process /// 0005625 // soluble fraction /// 0005615 // extracellular space /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0008134 // transcription factor binding /// 0006982 // response to lipid hydroperoxide /// 0004602 // glutathione peroxidase activity /// 0051289 // protein homotetramerization /// 0043295 // glutathione binding 48.014 31.061 y y y ruditapes_c489 -1.816 0.06 27.752 15.28 y y y ruditapes_c17072 2.352 0.06 6.409 15.072 y y y ruditapes_c8619 -1.838 0.06 26.927 14.649 y y y ruditapes_c8830 -1.92 0.06 23.808 12.401 y y y ruditapes_c7827 -2.073 0.06 19.846 9.576 y y y ruditapes2_c639 -2.092 0.06 19.537 9.341 y y y ruditapes_c5283 -2.41 0.06 14.802 6.142 y y y ruditapes_c26838 -2.523 0.06 13.769 5.458 y y y ruditapes_c30965 -2.591 0.06 13.199 5.094 y y y ruditapes_c16061 -2.661 0.06 12.668 4.76 y y y ruditapes2_lrc4521 -2.74 0.06 actin /// 0000281 // cytokinesis after mitosis /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0009792 // embryonic development ending in birth or egg hatching 12.079 4.407 y y y ruditapes_c15481 18.737 0.06 0.222 4.154 y y y ruditapes_c31817 -2.878 0.06 11.325 3.935 y y y ruditapes2_c754 -3.392 0.06 9.292 2.74 y y y ruditapes_c26368 -3.494 0.06 8.976 2.569 y y y ruditapes_c12514 -3.851 0.06 ubiquitin-conjugating enzyme e2 a /// 0006511 // ubiquitin-dependent protein catabolic process /// 0000785 // chromatin /// 0051246 // regulation of protein metabolic process /// 0001701 // in utero embryonic development /// 0043687 // post-translational protein modification /// 0006301 // postreplication repair /// 0005515 // protein binding /// 0004842 // ubiquitin-protein ligase activity 8.201 2.13 y y y ruditapes_c15296 -4.077 0.06 7.798 1.913 y y y ruditapes_lrc34420 -4.209 0.06 7.603 1.806 y y y ruditapes_c3049 -5.003 0.06 6.686 1.336 y y y ruditapes_c36193 -5.394 0.06 6.336 1.175 y y y ruditapes_c29259 -6.036 0.06 5.948 0.985 y y y ruditapes_lrc12098 -6.115 0.06 5.93 0.97 y y y ruditapes2_c1875 -6.469 0.06 cytochrome p450 /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 5.735 0.886 y y y ruditapes_c8693 -7.922 0.06 5.255 0.663 y y y ruditapes_lrc34125 1.349 0.061 ribosomal protein s3a /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part /// 0043232 // intracellular non-membrane-bounded organelle /// 0006412 // translation 64.825 87.433 y n y ruditapes2_c2558 -1.695 0.061 34.08 20.108 y y y ruditapes_c7135 -1.836 0.061 26.725 14.559 y y y ruditapes_c24454 -1.921 0.061 23.759 12.368 y y y ruditapes_c9520 -2.03 0.061 20.691 10.191 y y y ruditapes_c10948 -2.083 0.061 19.527 9.374 y y y ruditapes_c11330 -2.108 0.061 19.063 9.043 y y y ruditapes_c14146 -2.253 0.061 16.637 7.386 y y y ruditapes_c19936 -2.305 0.061 15.879 6.89 y y y ruditapes_c11221 -2.356 0.061 15.267 6.481 y y y ruditapes_c20185 -2.476 0.061 14.031 5.666 y y y ruditapes_c13097 -2.51 0.061 13.782 5.49 y y y ruditapes_c32251 -2.561 0.061 13.318 5.201 y y y ruditapes_c31612 ? 0.061 0 3.499 y y y ruditapes_c31395 -3.2 0.061 9.866 3.083 y y y ruditapes_c21810 -4.546 0.061 7.085 1.558 y y y ruditapes_c21651 -4.868 0.061 apical endosomal glycoprotein 6.724 1.381 y y y ruditapes_c8767 -5.837 0.061 6.021 1.032 y y y ruditapes2_c1238 -9.288 0.061 4.906 0.528 y y y ruditapes2_c1283 -1.223 0.062 ribosomal p0 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0016829 // lyase activity 204.384 167.1 y n y ruditapes_c18145 -1.688 0.062 34.227 20.275 y y y ruditapes_c4636 -1.964 0.062 22.261 11.332 y y y ruditapes_lrc12130 -2.06 0.062 19.849 9.633 y y y ruditapes2_c1426 -2.155 0.062 18.081 8.39 y y y ruditapes_c7870 -2.177 0.062 pten induced kinase 1 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0005739 // mitochondrion /// 0006468 // protein amino acid phosphorylation /// 0004674 // protein serine/threonine kinase activity /// 0000287 // magnesium ion binding /// 0007243 // protein kinase cascade 17.714 8.138 y y y ruditapes_c15810 -2.224 0.062 16.919 7.608 y y y ruditapes_lrc33985 -2.975 0.062 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 10.644 3.577 y y y ruditapes_c16384 -3.201 0.062 9.794 3.06 y y y ruditapes_c791 -3.694 0.062 8.387 2.27 y y y ruditapes2_c2104 -4.221 0.062 7.43 1.761 y y y ruditapes_c25381 -7.561 0.062 5.268 0.697 y y y ruditapes_lrc32619 -8.724 0.062 apolipophorin precursor protein 4.983 0.571 y y y ruditapes_c2994 -8.747 0.062 4.951 0.566 y y y ruditapes_c21433 -9.173 0.062 4.877 0.532 y y y ruditapes2_lrc3698 -13.76 0.062 lethal neo18 4.359 0.317 y y y ruditapes_c8002 -24.906 0.062 3.941 0.158 y y y ruditapes_c1889 -1.33 0.063 103.393 77.758 y n y ruditapes_c4344 -1.792 0.063 28.196 15.737 y y y ruditapes_c8290 -1.836 0.063 dopamine beta hydroxylase 26.249 14.295 y y y ruditapes2_c3301 -2.002 0.063 translocon-associated protein subunit gamma /// 0005789 // endoplasmic reticulum membrane /// 0005488 // binding /// 0016021 // integral to membrane 21.127 10.551 y y y ruditapes2_c2419 -2.312 0.063 15.594 6.744 y y y ruditapes_c8054 -2.345 0.063 15.203 6.484 y y y ruditapes_c3586 -2.483 0.063 nadh dehydrogenase 1 beta 19kda /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle 13.806 5.56 y y y ruditapes_c24502 -2.513 0.063 13.496 5.37 y y y ruditapes2_c122 -2.782 0.063 acyl- synthetase long-chain family member 1 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane 11.59 4.166 y y y ruditapes_c17318 -2.789 0.063 11.573 4.15 y y y ruditapes2_c2115 -2.791 0.063 11.505 4.123 y y y ruditapes_lrc18290 -3.1 0.063 10.062 3.246 y y y ruditapes_c4022 -3.103 0.063 10.07 3.245 y y y ruditapes_c19005 -3.263 0.063 9.441 2.893 y y y ruditapes_c21728 -3.982 0.063 7.792 1.957 y y y ruditapes_c5923 -4.519 0.063 6.996 1.548 y y y ruditapes_c16908 -5.455 0.063 6.17 1.131 y y y ruditapes_c19707 -7.307 0.063 5.282 0.723 y y y ruditapes_lrc29501 -133.426 0.063 perlucin 6 3.524 0.026 y y y ruditapes_c8422 -1.521 0.064 50.155 32.979 y y y ruditapes2_lrc4425 -1.686 0.064 ribosomal protein l21 33.931 20.12 y y y ruditapes_c23957 -1.701 0.064 32.947 19.372 y y y ruditapes_c10674 -1.74 0.064 novel protein (zgc:153646) 30.494 17.525 y y y ruditapes_c10229 -2.118 0.064 18.485 8.726 y y y ruditapes2_c675 -2.228 0.064 16.56 7.431 y y y ruditapes_lrc11364 -2.242 0.064 16.397 7.313 y y y ruditapes_c3771 -2.246 0.064 16.39 7.299 y y y ruditapes_c15336 -2.301 0.064 15.578 6.77 y y y ruditapes_c22664 -2.437 0.064 14.158 5.81 y y y ruditapes_c429 -2.941 0.064 mitochondrial ribosomal protein s18c /// 0005763 // mitochondrial small ribosomal subunit 10.706 3.641 y y y ruditapes_c14388 -3.119 0.064 hypothetical protein BRAFLDRAFT_176686 [Branchiostoma floridae] 9.911 3.178 y y y ruditapes_c30723 -4.217 0.064 7.349 1.743 y y y ruditapes_c7812 -4.268 0.064 7.279 1.705 y y y ruditapes_s34388 -4.765 0.064 6.702 1.406 y y y ruditapes_c19047 -5.73 0.064 5.934 1.036 y y y ruditapes_c20672 -6.375 0.064 5.609 0.88 y y y ruditapes_c3618 -7.005 0.064 5.357 0.765 y y y ruditapes_c16582 -9.848 0.064 4.699 0.477 y y y ruditapes_c21678 -1.519 0.065 50.178 33.044 y y y ruditapes_c7083 -1.691 0.065 33.326 19.704 y y y ruditapes_c6126 -1.921 0.065 23.01 11.979 y y y ruditapes_c21078 -1.922 0.065 22.984 11.96 y y y ruditapes_c10337 -1.926 0.065 22.86 11.869 y y y ruditapes2_c951 -1.969 0.065 21.51 10.922 y y y ruditapes_c14796 3.201 0.065 2.924 9.358 y y y ruditapes_c10559 -2.167 0.065 17.448 8.053 y y y ruditapes_s36301 5.808 0.065 ribosomal protein s19e /// 0030529 // ribonucleoprotein complex 0.998 5.798 y y y ruditapes2_c6512 -2.519 0.065 agrin 13.239 5.255 y y y ruditapes_c3706 -2.64 0.065 12.279 4.652 y y y ruditapes2_c1920 -2.732 0.065 chromosome 4 open reading frame 22 11.737 4.296 y y y ruditapes_c20253 -3.257 0.065 9.363 2.874 y y y ruditapes_c11073 -3.929 0.065 7.773 1.978 y y y ruditapes_c20355 -4.231 0.065 7.278 1.72 y y y ruditapes_lrc31664 -4.245 0.065 7.256 1.709 y y y ruditapes_s39216 -6.158 0.065 5.682 0.923 y y y ruditapes_lrc24170 -6.152 0.065 5.664 0.921 y y y ruditapes_c7382 -8.747 0.065 4.835 0.553 y y y ruditapes_c30097 -10.872 0.065 4.512 0.415 y y y ruditapes2_c4596 -1.303 0.066 ribosomal protein s15 /// 0005840 // ribosome 116.353 89.327 y n y ruditapes_c345 1.34 0.066 65.582 87.861 y n y ruditapes2_c962 -1.439 0.066 63.753 44.311 y n y ruditapes2_lrc3611 -1.452 0.066 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 61.032 42.02 y n y ruditapes2_c597 -1.466 0.066 58.045 39.592 y n y ruditapes2_c2746 -1.721 0.066 31.149 18.104 y y y ruditapes_c1621 -1.977 0.066 21.261 10.756 y y y ruditapes_lrc33543 3.238 0.066 atp:adp antiporter /// 0006839 // mitochondrial transport /// 0005488 // binding /// 0015865 // purine nucleotide transport /// 0005471 // ATP:ADP antiporter activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009536 // plastid 2.835 9.179 y y y ruditapes_c9498 -2.143 0.066 17.678 8.249 y y y ruditapes_c33171 -2.333 0.066 15.031 6.443 y y y ruditapes_lrc18135 -3.565 0.066 8.428 2.364 y y y ruditapes_c6187 -4.077 0.066 7.427 1.822 y y y ruditapes_c15873 -4.096 0.066 7.436 1.815 y y y ruditapes_lrc38397 -5.478 0.066 DEC-3 [Lymnaea stagnalis] 6.033 1.101 y y y ruditapes_c23447 -6.036 0.066 5.693 0.943 y y y ruditapes2_c2805 -7.307 0.066 5.173 0.708 y y y ruditapes_lrc27210 -9.451 0.066 4.674 0.495 y y y ruditapes_c24695 -21.126 0.066 3.907 0.185 y y y ruditapes_lrc36375 -25.017 0.066 3.827 0.153 y y y ruditapes2_lrc3794 1.475 0.067 tubulin alpha-1 chain /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 35.677 52.63 y n y ruditapes_c15380 -1.438 0.067 63.547 44.184 y n y ruditapes_c1250 -1.579 0.067 41.983 26.59 y y y ruditapes_lrc34296 -1.667 0.067 slc25a3-prov protein /// 0006810 // transport /// 0005488 // binding /// 0015317 // phosphate:hydrogen symporter activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 34.479 20.681 y y y ruditapes2_c497 -1.794 0.067 27.317 15.227 y y y ruditapes_c25942 -1.8 0.067 27.048 15.03 y y y ruditapes2_c3062 2.511 0.067 5.094 12.793 y y y ruditapes_c22040 -2.045 0.067 19.475 9.521 y y y ruditapes_c13070 -2.067 0.067 19.061 9.22 y y y ruditapes_c20493 -2.26 0.067 15.777 6.981 y y y ruditapes_c20141 -2.267 0.067 15.744 6.944 y y y ruditapes_c11798 -2.34 0.067 rna-binding partial 14.864 6.352 y y y ruditapes_c18540 -2.397 0.067 14.175 5.914 y y y ruditapes_s38966 5.576 0.067 elongation factor 1-beta /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 1.048 5.843 y y y ruditapes2_c2030 -2.481 0.067 13.344 5.378 y y y ruditapes_c28873 -2.613 0.067 12.346 4.725 y y y ruditapes_c3079 -2.914 0.067 10.56 3.624 y y y ruditapes_c16141 -3.535 0.067 8.432 2.385 y y y ruditapes_c33606 -5.161 0.067 6.174 1.196 y y y ruditapes_c14450 -14.296 0.067 4.158 0.291 y y y ruditapes_lrc34645 1.172 0.068 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 224.405 263.015 y n y ruditapes2_c2804 1.528 0.068 29.247 44.682 y y y ruditapes_c4838 1.684 0.068 18.574 31.279 y y y ruditapes_c8283 -1.688 0.068 32.795 19.432 y y y ruditapes_c11394 -1.709 0.068 31.456 18.408 y y y ruditapes_c2079 -2.045 0.068 19.388 9.483 y y y ruditapes_c13146 -2.224 0.068 16.155 7.265 y y y ruditapes_c8659 -2.328 0.068 14.881 6.392 y y y ruditapes_c26484 -2.395 0.068 14.15 5.908 y y y ruditapes_c1521 -2.484 0.068 13.266 5.34 y y y ruditapes_c7540 -2.538 0.068 bactericidal permeability increasing protein 12.811 5.047 y y y ruditapes2_lrc4239 -2.898 0.068 translationally controlled tumor protein 10.542 3.638 y y y ruditapes_c17693 -3.551 0.068 8.324 2.344 y y y ruditapes_c2733 -4.551 0.068 6.709 1.474 y y y ruditapes_c10743 -4.717 0.068 6.548 1.388 y y y ruditapes_c36522 -5.295 0.068 mitochondrial ribosomal protein l11 /// 0005622 // intracellular 6.039 1.141 y y y ruditapes2_c478 -8.895 0.068 4.708 0.529 y y y ruditapes_c31484 -? 0.068 3.335 0 y y y ruditapes_lrc9201 -1.694 0.069 32.073 18.934 y y y ruditapes2_c2099 -1.882 0.069 23.5 12.489 y y y ruditapes_c2514 -1.925 0.069 22.165 11.517 y y y ruditapes_lrc21084 -2.266 0.069 15.553 6.864 y y y ruditapes_c1321 -2.389 0.069 14.065 5.887 y y y ruditapes_c10685 -2.583 0.069 12.347 4.78 y y y ruditapes_lrc32221 -3.877 0.069 7.592 1.958 y y y ruditapes2_lrc3426 -4.704 0.069 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 6.49 1.38 y y y ruditapes_c16390 -5.621 0.069 5.807 1.033 y y y ruditapes_c23055 -6.227 0.069 5.456 0.876 y y y ruditapes_lrc28735 1.262 0.07 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 102.326 129.128 y n y ruditapes_lrc35323 1.352 0.07 ribosomal protein l17 /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 59.529 80.469 y n y ruditapes_c22059 -1.622 0.07 37.045 22.844 y y y ruditapes_lrc34983 -1.688 0.07 32.36 19.174 y y y ruditapes2_lrc4151 2.219 0.07 basic transcription factor 3-like 4 7.027 15.59 y y y ruditapes_c21277 -1.796 0.07 26.534 14.775 y y y ruditapes_c10110 -2.252 0.07 15.615 6.934 y y y ruditapes_c18785 -2.286 0.07 15.143 6.624 y y y ruditapes2_c1108 -2.306 0.07 14.887 6.456 y y y ruditapes_c9088 -2.637 0.07 11.884 4.506 y y y ruditapes_c23206 -2.934 0.07 cyclin d3 /// 0044424 // intracellular part 10.227 3.485 y y y ruditapes_lrc34765 -3.805 0.07 atpase mitochondrial 7.714 2.027 y y y ruditapes_c6266 -3.939 0.07 7.442 1.889 y y y ruditapes2_c1445 -4.082 0.07 7.238 1.773 y y y ruditapes2_c41 -4.488 0.07 selenium-dependent glutathione peroxidase /// 0006749 // glutathione metabolic process /// 0005625 // soluble fraction /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0004602 // glutathione peroxidase activity /// 0043295 // glutathione binding 6.709 1.495 y y y ruditapes_s39007 -4.499 0.07 6.673 1.483 y y y ruditapes_c17123 -4.79 0.07 6.392 1.334 y y y ruditapes_lrc19984 -7.413 0.07 5.013 0.676 y y y ruditapes2_c1012 -9.822 0.07 4.507 0.459 y y y ruditapes_c18433 -11.786 0.07 4.27 0.362 y y y ruditapes_c25012 -17.345 0.07 3.915 0.226 y y y ruditapes_c9856 -1.808 0.071 25.857 14.299 y y y ruditapes2_c1168 -1.869 0.071 23.595 12.627 y y y ruditapes_c9144 -1.911 0.071 22.323 11.679 y y y ruditapes_c12512 -1.941 0.071 21.457 11.053 y y y ruditapes_c25096 -2.064 0.071 18.575 9.001 y y y ruditapes_c1262 -2.207 0.071 16.067 7.28 y y y ruditapes_c17583 -2.279 0.071 15.09 6.622 y y y ruditapes_c9157 -2.409 0.071 13.659 5.67 y y y ruditapes_c5960 6.52 0.071 0.799 5.21 y y y ruditapes_c16445 -2.557 0.071 12.423 4.858 y y y ruditapes_lrc36041 -3.78 0.071 ribosomal protein l4 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005515 // protein binding /// 0005829 // cytosol 7.696 2.036 y y y ruditapes_lrc33696 -4.219 0.071 6.99 1.657 y y y ruditapes_c19589 -? 0.071 3.264 0 y y y ruditapes2_c1774 1.379 0.072 51.362 70.831 y n y ruditapes2_c1532 -1.901 0.072 22.495 11.835 y y y ruditapes_c17339 -1.962 0.072 20.789 10.597 y y y ruditapes2_lrc4739 -1.971 0.072 ribosomal protein s7 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0022627 // cytosolic small ribosomal subunit 20.521 10.412 y y y ruditapes_c3889 9.547 0.072 lethal neo18 0.466 4.448 y y y ruditapes2_c745 -2.748 0.072 11.071 4.029 y y y ruditapes_c8496 -3.024 0.072 9.683 3.202 y y y ruditapes2_c649 -3.644 0.072 proline-rich transmembrane protein 1 7.905 2.169 y y y ruditapes2_c1758 -3.922 0.072 7.352 1.875 y y y ruditapes_c19765 -3.994 0.072 7.273 1.821 y y y ruditapes_c29051 -4.2 0.072 6.973 1.66 y y y ruditapes_c11946 -6.595 0.072 5.186 0.786 y y y ruditapes_c13279 -7.348 0.072 4.94 0.672 y y y ruditapes_c5018 -13.899 0.072 4.037 0.29 y y y ruditapes_c1758 -1.526 0.073 46.269 30.315 y y y ruditapes_c1125 -1.629 0.073 35.667 21.899 y y y ruditapes_c15799 -1.736 0.073 28.859 16.621 y y y ruditapes_c83 -1.747 0.073 28.303 16.202 y y y ruditapes_c11289 -1.786 0.073 solute carrier family 6 (neurotransmitter transporter) member 14 /// 0022804 // active transmembrane transporter activity /// 0043231 // intracellular membrane-bounded organelle /// 0022891 // substrate-specific transmembrane transporter activity /// 0044459 // plasma membrane part 26.548 14.868 y y y ruditapes_c27553 -1.831 0.073 24.684 13.483 y y y ruditapes_c2981 -1.935 0.073 21.235 10.975 y y y ruditapes_c21410 -2.007 0.073 19.461 9.695 y y y ruditapes2_c517 -2.1 0.073 complement component 17.561 8.362 y y y ruditapes_c9869 -2.174 0.073 16.4 7.543 y y y ruditapes2_c1784 -2.311 0.073 14.476 6.263 y y y ruditapes_lrc26308 -2.439 0.073 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 13.147 5.389 y y y ruditapes_c19007 -2.785 0.073 tyrosine recombinase 10.731 3.853 y y y ruditapes_c30972 -2.997 0.073 9.772 3.26 y y y ruditapes_c17717 -3.827 0.073 7.468 1.951 y y y ruditapes_c16242 -3.987 0.073 inhibitor of apoptosis isoform a /// 0007166 // cell surface receptor linked signal transduction /// 0050829 // defense response to Gram-negative bacterium /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0019730 // antimicrobial humoral response /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0007423 // sensory organ development 7.239 1.815 y y y ruditapes_c11767 -? 0.073 3.208 0 y y y ruditapes2_c5656 -1.381 0.074 ribosomal protein s27a /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0006414 // translational elongation /// 0046872 // metal ion binding /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0022627 // cytosolic small ribosomal subunit /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction 75.648 54.781 y n y ruditapes_c15423 -1.491 0.074 50.642 33.96 y n y ruditapes_c8328 -1.51 0.074 48.119 31.875 y y y ruditapes2_c3084 -1.513 0.074 47.496 31.384 y y y ruditapes_c13116 -1.886 0.074 22.605 11.987 y y y ruditapes_c12663 -1.888 0.074 22.486 11.909 y y y ruditapes_c6288 -1.911 0.074 21.773 11.393 y y y ruditapes_c15381 -1.948 0.074 20.803 10.677 y y y ruditapes_c5723 -2.007 0.074 19.308 9.619 y y y ruditapes_c26108 -2.061 0.074 18.262 8.861 y y y ruditapes_c673 -2.136 0.074 16.868 7.895 y y y ruditapes_c27091 -2.256 0.074 15.044 6.67 y y y ruditapes_c11830 -2.613 0.074 11.761 4.5 y y y ruditapes2_c2316 -2.835 0.074 10.431 3.679 y y y ruditapes_c31839 -3.028 0.074 9.588 3.167 y y y ruditapes_c21961 -3.419 0.074 8.316 2.433 y y y ruditapes2_c3263 -8.524 0.074 4.588 0.538 y y y ruditapes2_lrc3972 -1.557 0.075 beta 2b /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0007017 // microtubule-based process 41.88 26.9 y y y ruditapes_lrc33919 -1.643 0.075 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 34.154 20.793 y y y ruditapes_c21798 -1.692 0.075 30.78 18.186 y y y ruditapes2_c955 -1.802 0.075 25.457 14.124 y y y ruditapes_lrc24601 -1.963 0.075 20.21 10.298 y y y ruditapes_c15150 -2.058 0.075 18.151 8.82 y y y ruditapes_c1387 -2.068 0.075 17.908 8.661 y y y ruditapes_c14324 -2.212 0.075 purple acid 15.525 7.019 y y y ruditapes2_c2565 -2.358 0.075 13.775 5.842 y y y ruditapes2_c544 -2.594 0.075 11.789 4.544 y y y ruditapes2_c1265 -2.636 0.075 11.526 4.373 y y y ruditapes2_c761 -2.875 0.075 pol-like protein 10.178 3.54 y y y ruditapes_c30072 -3.097 0.075 9.233 2.981 y y y ruditapes_c27487 -3.415 0.075 8.287 2.427 y y y ruditapes2_lrc3676 -3.877 0.075 predicted protein [Nematostella vectensis] 7.295 1.881 y y y ruditapes_c13824 -5.308 0.075 5.768 1.087 y y y ruditapes_lrc25030 -5.877 0.075 5.416 0.922 y y y ruditapes2_c1191 -1.46 0.076 55.326 37.887 y n y ruditapes2_c1510 -1.551 0.076 42.46 27.383 y y y ruditapes_c5168 -1.647 0.076 33.794 20.524 y y y ruditapes_c33817 -1.74 0.076 28.162 16.187 y y y ruditapes_lrc32401 -1.767 0.076 atp synthase d chain /// 0005811 // lipid particle 26.749 15.139 y y y ruditapes_c1547 -1.879 0.076 22.559 12.004 y y y ruditapes_c3340 -1.879 0.076 22.435 11.943 y y y ruditapes_c5330 -1.958 0.076 20.205 10.321 y y y ruditapes_c29495 -2.403 0.076 13.221 5.503 y y y ruditapes2_c48 -2.554 0.076 11.965 4.685 y y y ruditapes_c23121 -2.566 0.076 11.922 4.647 y y y ruditapes_lrc33006 -2.739 0.076 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 10.816 3.949 y y y ruditapes_c11131 -3.039 0.076 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 9.359 3.08 y y y ruditapes_c9811 -4.262 0.076 6.682 1.568 y y y ruditapes_c23437 -4.505 0.076 6.392 1.419 y y y ruditapes2_c1940 -4.562 0.076 6.326 1.387 y y y ruditapes_c23520 -4.67 0.076 6.227 1.333 y y y ruditapes_c15531 -4.714 0.076 6.178 1.31 y y y ruditapes2_c1835 -6.424 0.076 5.113 0.796 y y y ruditapes_c5532 1.626 0.077 20.444 33.241 y y y ruditapes2_c5679 1.726 0.077 ribosomal protein s15 /// 0005840 // ribosome 15.809 27.28 y y y ruditapes_c12018 -1.684 0.077 30.871 18.329 y y y ruditapes_c738 -1.813 0.077 24.649 13.592 y y y ruditapes_c17219 -1.86 0.077 22.924 12.324 y y y ruditapes2_lrc4617 -1.929 0.077 dynein cytoplasmic light peptide transcript variant 1 /// 0030286 // dynein complex /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0005829 // cytosol /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 20.874 10.821 y y y ruditapes_c8878 -1.972 0.077 19.741 10.008 y y y ruditapes_c9233 -2.142 0.077 16.458 7.684 y y y ruditapes2_lrc5592 4.025 0.077 kda midgut partial 1.704 6.86 y y y ruditapes_c2922 -2.249 0.077 14.905 6.627 y y y ruditapes_c22508 -2.344 0.077 13.803 5.89 y y y ruditapes_c19142 -2.344 0.077 13.781 5.878 y y y ruditapes_c4254 -2.567 0.077 prolyl-trna synthetase associated region 11.847 4.616 y y y ruditapes_c23548 -2.678 0.077 11.037 4.122 y y y ruditapes_c1118 -2.76 0.077 10.59 3.838 y y y ruditapes_c1039 -4.042 0.077 6.924 1.713 y y y ruditapes_lrc34485 -6.586 0.077 cg15828 cg15828- partial 5.022 0.763 y y y ruditapes2_c3998 -12.072 0.077 4.037 0.334 y y y ruditapes2_c2728 -67.825 0.077 high mobility group protein b2 /// 0005634 // nucleus /// 0003677 // DNA binding 3.263 0.048 y y y ruditapes2_c742 -1.431 0.078 60.265 42.114 y n y ruditapes_c2160 -1.449 0.078 56.545 39.023 y n y ruditapes_c22659 -1.601 0.078 36.871 23.028 y y y ruditapes_c24917 -1.683 0.078 30.926 18.375 y y y ruditapes2_lrc4983 -1.73 0.078 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 28.13 16.264 y y y ruditapes_c13485 -1.796 0.078 25.126 13.987 y y y ruditapes2_c1248 -1.921 0.078 20.907 10.882 y y y ruditapes_c20377 -1.96 0.078 19.942 10.175 y y y ruditapes2_c1100 -2.065 0.078 17.616 8.529 y y y ruditapes_c20823 -2.07 0.078 17.5 8.455 y y y ruditapes_lrc35066 3.245 0.078 GF24496 [Drosophila ananassae] 2.6 8.438 y y y ruditapes_c17387 -2.224 0.078 15.145 6.81 y y y ruditapes_lrc33418 -2.356 0.078 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 13.584 5.766 y y y ruditapes_lrc20829 -2.421 0.078 12.871 5.315 y y y ruditapes_lrc21440 -2.575 0.078 ribosomal protein l40 "/// 0006511 // ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0005811 // lipid particle /// 0006950 // response to stress /// 0042254 // ribosome biogenesis /// 0005634 // nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006412 // translation /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0006464 // protein modification process" 11.664 4.53 y y y ruditapes_lrc25599 -2.576 0.078 ppia protein /// 0016853 // isomerase activity 11.647 4.521 y y y ruditapes_c7155 -2.732 0.078 10.678 3.909 y y y ruditapes_c11342 -2.77 0.078 10.453 3.774 y y y ruditapes2_c2540 -3.152 0.078 8.834 2.802 y y y ruditapes_lrc12955 -3.349 0.078 8.25 2.464 y y y ruditapes_c23390 -3.475 0.078 7.968 2.293 y y y ruditapes_c1741 -4.232 0.078 6.635 1.568 y y y ruditapes_c10798 -4.399 0.078 6.427 1.461 y y y ruditapes2_lrc4749 -4.527 0.078 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.273 1.386 y y y ruditapes_c6233 -4.689 0.078 6.129 1.307 y y y ruditapes_c10217 -4.811 0.078 6.014 1.25 y y y ruditapes_s40282 -5.612 0.078 5.464 0.974 y y y ruditapes_c26551 -7.165 0.078 4.815 0.672 y y y ruditapes_lrc28196 -7.783 0.078 4.629 0.595 y y y ruditapes_c24232 -10.378 0.078 4.184 0.403 y y y ruditapes2_c1706 -1.334 0.079 90.528 67.868 y n y ruditapes2_lrc5625 -1.476 0.079 ribosomal protein s3 "/// 0042981 // regulation of apoptosis /// 0060255 // regulation of macromolecule metabolic process /// 0065009 // regulation of molecular function /// 0006974 // response to DNA damage stimulus /// 0019219 // regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0005829 // cytosol /// 0003723 // RNA binding" 51.348 34.78 y n y ruditapes_lrc13862 -1.772 0.079 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 25.979 14.659 y y y ruditapes2_c1371 -1.787 0.079 25.438 14.233 y y y ruditapes_c28432 -1.876 0.079 22.149 11.805 y y y ruditapes_c28842 -2.166 0.079 15.795 7.293 y y y ruditapes_lrc32772 -2.573 0.079 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 11.621 4.517 y y y ruditapes_c852 -2.908 0.079 serine threonine-protein 9.713 3.34 y y y ruditapes_c27724 -2.949 0.079 9.549 3.238 y y y ruditapes_lrc8920 -3.054 0.079 9.123 2.987 y y y ruditapes2_c2266 -3.76 0.079 7.313 1.945 y y y ruditapes_c17633 -3.914 0.079 7.06 1.804 y y y ruditapes_c23090 -4.368 0.079 6.431 1.472 y y y ruditapes_c8158 -4.495 0.079 6.271 1.395 y y y ruditapes_c19860 -5.559 0.079 5.427 0.976 y y y ruditapes_c582 -1.759 0.08 26.434 15.029 y y y ruditapes_c17528 -2.019 0.08 18.358 9.091 y y y ruditapes_c27451 -2.07 0.08 17.252 8.335 y y y ruditapes2_c5063 -2.48 0.08 serine protease inhibitor 2 12.233 4.934 y y y ruditapes_c31763 -2.556 0.08 11.643 4.555 y y y ruditapes_c9535 -2.682 0.08 10.819 4.035 y y y ruditapes_c26962 -2.836 0.08 10.02 3.533 y y y ruditapes_c7762 -3.276 0.08 tpa_exp: tyrosine recombinase 8.36 2.552 y y y ruditapes2_c2992 -4.384 0.08 6.376 1.454 y y y ruditapes_c13298 -4.84 0.08 5.925 1.224 y y y ruditapes_lrc9610 -6.073 0.08 5.138 0.846 y y y ruditapes2_lrc2734 -6.887 0.08 4.838 0.703 y y y ruditapes_lrc36896 -9.868 0.08 4.196 0.425 y y y ruditapes2_lrc6520 -100.07 0.08 cytochrome c oxidase subunit via polypeptide 1 3.155 0.032 y y y ruditapes_lrc36809 1.558 0.081 s9 ribosomal protein /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 24.266 37.796 y y y ruditapes2_c2172 -1.513 0.081 hypothetical protein [Schistosoma mansoni] 45.239 29.893 y y y ruditapes_c25213 -1.517 0.081 44.901 29.598 y y y ruditapes_lrc21577 -2.544 0.081 11.699 4.599 y y y ruditapes_c27128 -2.76 0.081 10.341 3.747 y y y ruditapes_c28508 -2.886 0.081 9.716 3.367 y y y ruditapes_c29281 -2.931 0.081 9.479 3.234 y y y ruditapes_c26682 -3.653 0.081 7.412 2.029 y y y ruditapes2_c2685 -8.895 0.081 4.301 0.484 y y y ruditapes_lrc32513 -1.267 0.082 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 129.111 101.91 y n y ruditapes_lrc17685 -1.868 0.082 21.991 11.771 y y y ruditapes_c14900 -1.99 0.082 18.751 9.424 y y y ruditapes_c10028 -3.184 0.082 8.517 2.675 y y y ruditapes2_c1553 -3.404 0.082 gram negative bacteria binding protein 2 7.895 2.319 y y y ruditapes_c5714 -4.582 0.082 6.079 1.327 y y y ruditapes_c14213 -4.966 0.082 5.748 1.157 y y y ruditapes_c22638 -5.303 0.082 5.491 1.036 y y y ruditapes_lrc27132 -5.93 0.082 heat shock protein 22 isoform 2 5.15 0.868 y y y ruditapes_lrc12034 -11.461 0.082 3.947 0.344 y y y ruditapes_lrc32694 -13.343 0.082 3.802 0.285 y y y ruditapes_lrc35424 -35.58 0.082 3.29 0.092 y y y ruditapes_lrc39183 -36.692 0.082 3.296 0.09 y y y ruditapes_c1007 1.602 0.083 20.926 33.525 y y y ruditapes_lrc32229 -1.591 0.083 nascent polypeptide-associated complex subunit alpha /// 0003713 // transcription coactivator activity /// 0006350 // transcription /// 0005634 // nucleus /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0016787 // hydrolase activity /// 0017025 // TATA-binding protein binding 36.522 22.955 y y y ruditapes_c1960 -1.662 0.083 31.007 18.652 y y y ruditapes_c7973 -1.775 0.083 25.207 14.201 y y y ruditapes2_lrc4479 -1.791 0.083 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 24.517 13.691 y y y ruditapes_c7931 -1.892 0.083 21.105 11.155 y y y ruditapes_c3110 -1.917 0.083 20.446 10.667 y y y ruditapes_c4774 -2.054 0.083 17.274 8.409 y y y ruditapes_c11801 -2.097 0.083 dna polymerase iii alpha subunit 16.524 7.88 y y y ruditapes_c6966 -2.269 0.083 14.048 6.191 y y y ruditapes_c24947 -2.339 0.083 13.315 5.692 y y y ruditapes_c12933 -2.625 0.083 10.976 4.181 y y y ruditapes_c8813 -2.679 0.083 10.611 3.961 y y y ruditapes_c17517 -2.727 0.083 10.339 3.792 y y y ruditapes_c5003 -3.36 0.083 7.951 2.366 y y y ruditapes_c20656 -3.806 0.083 7.052 1.853 y y y ruditapes_c21696 -3.99 0.083 6.742 1.69 y y y ruditapes_lrc35863 1.698 0.084 ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.157 27.433 y y y ruditapes_c29889 -1.82 0.084 23.348 12.827 y y y ruditapes2_c2318 -1.831 0.084 22.909 12.515 y y y ruditapes2_c961 -1.871 0.084 21.575 11.529 y y y ruditapes_c5361 -1.898 0.084 20.752 10.933 y y y ruditapes2_c2507 -2.08 0.084 16.692 8.026 y y y ruditapes_c18597 -2.132 0.084 15.827 7.425 y y y ruditapes_c3390 -2.136 0.084 15.763 7.381 y y y ruditapes2_c184 -2.15 0.084 xylose isomerase /// 0046872 // metal ion binding /// 0006098 // pentose-phosphate shunt /// 0042732 // D-xylose metabolic process /// 0009045 // xylose isomerase activity 15.554 7.235 y y y ruditapes_c16391 -2.311 0.084 13.53 5.855 y y y ruditapes_lrc35417 -6.905 0.084 basic transcription factor 3-like 4 4.68 0.678 y y y ruditapes_c13060 -6.918 0.084 4.679 0.676 y y y ruditapes_lrc14243 -13.343 0.084 3.764 0.282 y y y ruditapes_c27449 -40.028 0.084 3.226 0.081 y y y ruditapes2_c2727 -1.423 0.085 59.15 41.555 y n y ruditapes2_c1591 -1.514 0.085 44.173 29.179 y y y ruditapes_c27853 1.833 0.085 11.883 21.78 y y y ruditapes_c469 -1.687 0.085 dolichyl-diphosphooligosaccharide-protein glycosyltransferase /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0006496 // protein amino acid terminal N-glycosylation /// 0005515 // protein binding /// 0034097 // response to cytokine stimulus /// 0016021 // integral to membrane /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity /// 0005792 // microsome /// 0042110 // T cell activation 29.306 17.374 y y y ruditapes_c13647 -1.782 0.085 24.573 13.786 y y y ruditapes_c27088 -1.809 0.085 23.617 13.056 y y y ruditapes_lrc32618 -1.853 0.085 22.011 11.877 y y y ruditapes_c6228 -1.973 0.085 18.71 9.483 y y y ruditapes_c9933 -2.007 0.085 18.027 8.981 y y y ruditapes_lrc32136 -2.023 0.085 AF339450_1hillarin [Hirudo medicinalis] 17.689 8.744 y y y ruditapes_c2464 -2.116 0.085 ferritin /// 0055114 // oxidation reduction /// 0004322 // ferroxidase activity /// 0006826 // iron ion transport /// 0006879 // cellular iron ion homeostasis /// 0005737 // cytoplasm /// 0008199 // ferric iron binding 16.011 7.567 y y y ruditapes_c18120 -2.235 0.085 14.282 6.39 y y y ruditapes_c12913 -4.031 0.085 6.581 1.633 y y y ruditapes_c25465 -4.178 0.085 6.409 1.534 y y y ruditapes_c25873 -8.339 0.085 4.293 0.515 y y y ruditapes_c13326 -9.785 0.085 4.069 0.416 y y y ruditapes_lrc35717 -21.602 0.085 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 3.409 0.158 y y y ruditapes_c5417 -1.645 0.086 31.619 19.217 y y y ruditapes2_c2108 -1.691 0.086 28.834 17.053 y y y ruditapes_c9710 -1.751 0.086 25.727 14.695 y y y ruditapes2_c1433 -1.795 0.086 23.851 13.285 y y y ruditapes_c30986 2.329 0.086 5.493 12.791 y y y ruditapes_c13941 -2.053 0.086 16.919 8.242 y y y ruditapes_c19208 3.904 0.086 1.698 6.628 y y y ruditapes2_c3511 -2.271 0.086 s-crystallin sl11 (major lens polypeptide) 13.719 6.042 y y y ruditapes_c938 -2.549 0.086 11.232 4.407 y y y ruditapes_c12158 -2.56 0.086 adenylate cyclase /// 0016020 // membrane /// 0016829 // lyase activity 11.203 4.376 y y y ruditapes_c21561 -2.69 0.086 10.354 3.848 y y y ruditapes_c2458 -2.747 0.086 10.051 3.659 y y y ruditapes_c13769 -2.872 0.086 9.454 3.291 y y y ruditapes_lrc33537 -2.878 0.086 9.427 3.276 y y y ruditapes_c3035 -3.747 0.086 7.01 1.871 y y y ruditapes_c24692 -9.266 0.086 4.115 0.444 y y y ruditapes_c3858 -1.415 0.087 60.376 42.654 y n y ruditapes2_c2417 -1.448 0.087 53.515 36.955 y n y ruditapes2_c706 -1.762 0.087 25.157 14.279 y y y ruditapes_c3051 2.886 0.087 3.167 9.141 y y y ruditapes_c15975 -2.054 0.087 16.86 8.21 y y y ruditapes_c31700 -2.13 0.087 15.539 7.295 y y y ruditapes_c3767 -2.247 0.087 13.985 6.224 y y y ruditapes_lrc36178 -2.363 0.087 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 12.707 5.378 y y y ruditapes_c12723 -2.402 0.087 12.337 5.136 y y y ruditapes2_c295 -2.419 0.087 phospholipase b1 /// 0016787 // hydrolase activity 12.199 5.043 y y y ruditapes_c14369 -2.651 0.087 10.499 3.96 y y y ruditapes_c16736 -2.698 0.087 10.282 3.812 y y y ruditapes_c688 -2.807 0.087 9.698 3.455 y y y ruditapes_c13203 -2.865 0.087 9.447 3.297 y y y ruditapes_c24860 -3.596 0.087 7.232 2.011 y y y ruditapes_c2140 -4.052 0.087 6.497 1.603 y y y ruditapes_c31575 -4.628 0.087 5.848 1.264 y y y ruditapes_c11598 -4.79 0.087 5.689 1.188 y y y ruditapes_c23669 -6.82 0.087 4.63 0.679 y y y ruditapes_c3849 -10.674 0.087 small nuclear ribonucleoprotein polypeptide f /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 3.908 0.366 y y y ruditapes2_c1308 -1.399 0.088 63.729 45.547 y n y ruditapes2_lrc4246 -1.5 0.088 45.028 30.026 y y y ruditapes_c27686 -1.794 0.088 tgf beta-inducible nuclear protein 1 23.725 13.227 y y y ruditapes_lrc32562 -1.813 0.088 elongation factor 1 delta /// 0006414 // translational elongation /// 0005515 // protein binding /// 0004871 // signal transducer activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol 22.872 12.613 y y y ruditapes_c10089 -2.126 0.088 15.493 7.287 y y y ruditapes2_lrc5258 -2.154 0.088 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 15.105 7.013 y y y ruditapes_c16699 -2.444 0.088 11.921 4.879 y y y ruditapes_c8633 -2.657 0.088 10.439 3.929 y y y ruditapes2_c2339 -2.792 0.088 9.729 3.485 y y y ruditapes2_c4685 -2.901 0.088 galactoside- 3 9.225 3.18 y y y ruditapes_c30073 -3.141 0.088 8.318 2.648 y y y ruditapes_c8933 -4.54 0.088 5.872 1.293 y y y ruditapes_c14120 -4.562 0.088 5.855 1.284 y y y ruditapes_c26776 -6.279 0.088 4.794 0.763 y y y ruditapes_c29936 1.518 0.089 26.416 40.087 y y y ruditapes_c21723 1.701 0.089 15.539 26.437 y y y ruditapes_c17313 -1.971 0.089 18.284 9.276 y y y ruditapes_c30413 -2.063 0.089 16.447 7.973 y y y ruditapes2_c371 -2.134 0.089 15.272 7.157 y y y ruditapes_c22321 -2.407 0.089 12.167 5.056 y y y ruditapes_s33824 -2.459 0.089 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 11.704 4.759 y y y ruditapes_c5570 -2.679 0.089 10.2 3.807 y y y ruditapes_c474 -2.693 0.089 keratinocyte associated protein 2 /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity 10.147 3.767 y y y ruditapes_c19017 -3.29 0.089 7.874 2.393 y y y ruditapes_c18697 -3.389 0.089 7.607 2.245 y y y ruditapes_c7290 -3.469 0.089 7.441 2.145 y y y ruditapes_c16608 -3.558 0.089 7.211 2.027 y y y ruditapes2_c1498 -4.818 0.089 5.602 1.163 y y y ruditapes_c12861 -6.57 0.089 4.651 0.708 y y y ruditapes2_c713 -1.545 0.09 39.203 25.381 y y y ruditapes_c13777 -1.566 0.09 37.145 23.717 y y y ruditapes_c8249 -1.682 0.09 28.696 17.065 y y y ruditapes_lrc17386 -1.82 0.09 22.347 12.276 y y y ruditapes2_c1342 -2.007 0.09 "PREDICTED: similar to predicted protein, partial [Hydra magnipapillata]" 17.465 8.704 y y y ruditapes_c1745 -2.035 0.09 16.918 8.315 y y y ruditapes_lrc6892 5.974 0.09 cytochrome c oxidase subunit viic 0.806 4.816 y y y ruditapes_c8892 -4.948 0.09 5.461 1.104 y y y ruditapes_c31217 -5.467 0.09 5.119 0.936 y y y ruditapes_c25439 -5.995 0.09 4.843 0.808 y y y ruditapes_c26126 -6.148 0.09 4.781 0.778 y y y ruditapes2_lrc2136 -6.379 0.09 4.697 0.736 y y y ruditapes_c16420 -6.857 0.09 4.533 0.661 y y y ruditapes_c12860 -30.021 0.09 3.186 0.106 y y y ruditapes2_c2413 -1.492 0.091 patched domain-containing protein 3 (rnd-type protein rndeu-3) 45.228 30.314 y n y ruditapes_c5046 -1.826 0.091 22.035 12.064 y y y ruditapes_lrc18847 -1.837 0.091 21.697 11.809 y y y ruditapes_c26807 -1.938 0.091 18.811 9.705 y y y ruditapes_c4411 -1.954 0.091 18.408 9.419 y y y ruditapes2_c2544 -2.162 0.091 14.726 6.813 y y y ruditapes_c16039 -2.194 0.091 14.244 6.493 y y y ruditapes_c19337 -2.262 0.091 13.392 5.92 y y y ruditapes_c9410 -2.41 0.091 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 11.981 4.971 y y y ruditapes_c9956 -2.458 0.091 11.576 4.71 y y y ruditapes_c5656 -3.513 0.091 7.232 2.059 y y y ruditapes_c9877 -3.793 0.091 6.71 1.769 y y y ruditapes_c2379 -3.929 0.091 6.515 1.658 y y y ruditapes_c18722 -4.096 0.091 cyclin b3 /// 0005634 // nucleus 6.282 1.534 y y y ruditapes_c25353 -7.325 0.091 4.374 0.597 y y y ruditapes_lrc35856 -7.466 0.091 glutathione s-transferase c 4.322 0.579 y y y ruditapes_c561 -1.666 0.092 29.2 17.528 y y y ruditapes_c31473 -1.702 0.092 27.192 15.981 y y y ruditapes_c22056 -1.794 0.092 23.093 12.869 y y y ruditapes_c12829 -1.801 0.092 22.765 12.639 y y y ruditapes_lrc39587 -1.984 0.092 set translocation (myeloid leukemia-associated) b /// 0048471 // perinuclear region of cytoplasm /// 0004864 // phosphoprotein phosphatase inhibitor activity /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0035067 // negative regulation of histone acetylation /// 0005783 // endoplasmic reticulum /// 0008601 // protein phosphatase type 2A regulator activity /// 0006260 // DNA replication /// 0006913 // nucleocytoplasmic transport /// 0042393 // histone binding 17.694 8.919 y y y ruditapes_c17310 -1.986 0.092 17.668 8.894 y y y ruditapes2_c1964 -2.025 0.092 16.795 8.292 y y y ruditapes_c12459 -2.224 0.092 13.803 6.207 y y y ruditapes_c5990 -2.43 0.092 11.754 4.838 y y y ruditapes_c15181 -2.444 0.092 phosphopyruvate hydratase /// 0044464 // cell part 11.578 4.736 y y y ruditapes_c29405 -2.529 0.092 10.997 4.349 y y y ruditapes_c19040 -2.718 0.092 9.811 3.61 y y y ruditapes_c12602 -3.209 0.092 7.954 2.479 y y y ruditapes_c4949 -3.558 0.092 7.091 1.993 y y y ruditapes_c4762 -6.671 0.092 4.539 0.68 y y y ruditapes_c9313 -6.788 0.092 4.503 0.663 y y y ruditapes_c26917 -18.531 0.092 3.352 0.181 y y y ruditapes_c15047 -27.426 0.092 3.182 0.116 y y y ruditapes2_c3265 1.405 0.093 ribosomal protein l10 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 39.734 55.843 y n y ruditapes_lrc30957 1.474 0.093 30.013 44.239 y n y ruditapes_lrc38869 1.927 0.093 beta 2b /// 0005515 // protein binding 9.428 18.17 y y y ruditapes_c1848 -1.751 0.093 gustatory receptor candidate 19 24.674 14.093 y y y ruditapes_c28808 -1.869 0.093 20.399 10.916 y y y ruditapes_c2312 -2.001 0.093 17.166 8.577 y y y ruditapes2_c2521 -2.097 0.093 15.528 7.404 y y y ruditapes_c401 -2.125 0.093 type alpha 1 /// 0005198 // structural molecule activity /// 0005578 // proteinaceous extracellular matrix 15.091 7.103 y y y ruditapes_c5684 -2.167 0.093 14.409 6.65 y y y ruditapes_c19167 -2.293 0.093 12.939 5.643 y y y ruditapes_c1565 -2.438 0.093 11.556 4.74 y y y ruditapes2_c2531 -2.455 0.093 11.478 4.676 y y y ruditapes_c11189 -2.54 0.093 10.869 4.28 y y y ruditapes2_lrc4104 -2.957 0.093 mitochondrial ubiquinol cytochrome c reductase complex 8.725 2.95 y y y ruditapes_c12353 -3.106 0.093 8.191 2.637 y y y ruditapes_c8833 -3.25 0.093 7.793 2.398 y y y ruditapes_lrc11227 -3.336 0.093 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 7.561 2.267 y y y ruditapes_c5192 -3.519 0.093 7.128 2.025 y y y ruditapes_lrc16947 -3.78 0.093 6.653 1.76 y y y ruditapes2_lrc1599 -5.238 0.093 5.165 0.986 y y y ruditapes_lrc21213 -6.017 0.093 4.742 0.788 y y y ruditapes_c37655 -14.578 0.093 elastase 2 like 3.492 0.24 y y y ruditapes_c711 -1.389 0.094 64.239 46.252 y n y ruditapes2_c827 -1.642 0.094 30.292 18.446 y y y ruditapes_c7777 -1.709 0.094 26.495 15.505 y y y ruditapes_c20393 2.243 0.094 5.807 13.028 y y y ruditapes_c3180 -1.791 0.094 22.918 12.799 y y y ruditapes_lrc18082 2.304 0.094 5.361 12.35 y y y ruditapes2_c2007 -1.845 0.094 21.05 11.411 y y y ruditapes_c22735 -2.224 0.094 13.67 6.147 y y y ruditapes_c8605 -2.379 0.094 12.001 5.045 y y y ruditapes_c14110 8.394 0.094 0.48 4.032 y y y ruditapes_c11026 -2.591 0.094 10.445 4.031 y y y ruditapes_c13977 -3.17 0.094 7.965 2.512 y y y ruditapes_c16704 -3.307 0.094 7.579 2.292 y y y ruditapes2_c375 -3.47 0.094 cg5499-pa /// 0005694 // chromosome 7.213 2.079 y y y ruditapes_c16592 -3.995 0.094 6.303 1.578 y y y ruditapes_c9215 -4.389 0.094 5.799 1.321 y y y ruditapes_lrc31111 -5.384 0.094 5.055 0.939 y y y ruditapes_lrc32649 -6.274 0.094 receptor of activated kinase c 1 /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding 4.611 0.735 y y y ruditapes_c27317 -8.339 0.094 4.08 0.489 y y y ruditapes_c10663 -12.453 0.094 3.585 0.288 y y y ruditapes_c12253 1.455 0.095 31.867 46.368 y n y ruditapes_c24978 1.604 0.095 19.354 31.053 y y y ruditapes2_c4432 -1.544 0.095 slc25a3-prov protein /// 0016020 // membrane 38.155 24.712 y y y ruditapes_c11934 -1.819 0.095 21.749 11.954 y y y ruditapes_c8978 -1.841 0.095 21.051 11.435 y y y ruditapes_lrc29467 -2.042 0.095 16.23 7.948 y y y ruditapes_c28197 -2.055 0.095 16.014 7.792 y y y ruditapes_c9969 -2.145 0.095 14.573 6.795 y y y ruditapes_lrc9079 -2.23 0.095 13.473 6.042 y y y ruditapes_c13397 -2.268 0.095 13.052 5.756 y y y ruditapes_c8128 -2.33 0.095 12.424 5.332 y y y ruditapes_c26385 -2.387 0.095 11.888 4.98 y y y ruditapes_c12841 -2.544 0.095 10.681 4.198 y y y ruditapes2_c1132 12.929 0.095 0.272 3.516 y y y ruditapes_c9131 -3.834 0.095 6.478 1.69 y y y ruditapes_c28269 -4.13 0.095 6.08 1.472 y y y ruditapes_c19480 -8.553 0.095 4.003 0.468 y y y ruditapes_c25188 -8.895 0.095 3.945 0.443 y y y ruditapes_c4386 -1.395 0.096 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 61.711 44.252 y n y ruditapes_c23098 -1.503 0.096 42.509 28.288 y y y ruditapes_c20675 -1.595 0.096 33.321 20.886 y y y ruditapes_c21948 -1.669 0.096 28.228 16.913 y y y ruditapes2_lrc2890 -1.734 0.096 ribosomal protein s7 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 24.955 14.394 y y y ruditapes_c24684 2.444 0.096 protein 4.507 11.013 y y y ruditapes2_c1521 -1.929 0.096 18.482 9.581 y y y ruditapes2_c1073 -1.944 0.096 h aca ribonucleoprotein complex subunit 2-like protein /// 0042254 // ribosome biogenesis /// 0003676 // nucleic acid binding /// 0044424 // intracellular part 18.1 9.309 y y y ruditapes_c11193 -1.999 0.096 16.936 8.472 y y y ruditapes_c4002 -2.067 0.096 15.662 7.578 y y y ruditapes_lrc22587 3.957 0.096 1.559 6.169 y y y ruditapes_c11443 -2.335 0.096 12.274 5.257 y y y ruditapes_c1595 -2.35 0.096 12.104 5.15 y y y ruditapes_c8791 -2.845 0.096 8.998 3.162 y y y ruditapes_c8056 -3.002 0.096 8.401 2.798 y y y ruditapes_c25330 ? 0.096 0 2.763 y y y ruditapes_c26195 -3.113 0.096 multidrug resistance protein "/// 0005524 // ATP binding /// 0006810 // transport /// 0016021 // integral to membrane /// 0042626 // ATPase activity, coupled to transmembrane movement of substances" 8.031 2.579 y y y ruditapes_lrc11398 -3.257 0.096 7.626 2.341 y y y ruditapes_c23844 -3.624 0.096 6.818 1.881 y y y ruditapes_c14886 -3.799 0.096 homolog 1 ( coli) /// 0031167 // rRNA methylation /// 0008168 // methyltransferase activity 6.511 1.714 y y y ruditapes2_c2774 -3.918 0.096 6.335 1.617 y y y ruditapes_c10698 -5.003 0.096 5.207 1.041 y y y ruditapes_c11581 -6.437 0.096 4.497 0.699 y y y ruditapes_c23115 -6.548 0.096 4.457 0.681 y y y ruditapes_lrc22381 -7.366 0.096 4.235 0.575 y y y ruditapes2_lrc3294 -7.691 0.096 4.161 0.541 y y y ruditapes2_lrc3930 -1.272 0.097 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0005080 // protein kinase C binding /// 0007205 // activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding 113.653 89.349 y n y ruditapes2_c2334 1.397 0.097 40.398 56.425 y n y ruditapes_c23391 -1.747 0.097 24.25 13.883 y y y ruditapes2_c1704 -1.936 0.097 18.221 9.412 y y y ruditapes_c28951 -2.147 0.097 14.409 6.712 y y y ruditapes_c28176 -2.704 0.097 9.619 3.557 y y y ruditapes_c25716 -2.78 0.097 9.225 3.319 y y y ruditapes_c7001 -2.818 0.097 9.082 3.223 y y y ruditapes_c28337 -3.221 0.097 7.67 2.382 y y y ruditapes_c13580 -4.765 0.097 5.376 1.128 y y y ruditapes_c11687 -4.988 0.097 5.21 1.044 y y y ruditapes_c5087 -1.671 0.098 27.81 16.641 y y y ruditapes_c936 -1.731 0.098 tpa_inf: variable region-containing chitin-binding protein 2 24.822 14.344 y y y ruditapes_c22820 -1.788 0.098 22.539 12.607 y y y ruditapes_lrc37662 3.581 0.098 1.866 6.681 y y y ruditapes_c15339 -2.259 0.098 12.95 5.734 y y y ruditapes_c24303 -2.435 0.098 11.28 4.633 y y y ruditapes_c17160 -2.703 0.098 9.566 3.539 y y y ruditapes_c21975 -2.856 0.098 8.844 3.097 y y y ruditapes_c24477 -2.878 0.098 8.758 3.043 y y y ruditapes_c921 -2.891 0.098 8.716 3.015 y y y ruditapes2_c2008 -2.928 0.098 8.583 2.931 y y y ruditapes_c17337 -3.691 0.098 6.604 1.789 y y y ruditapes_c20824 -4.289 0.098 5.785 1.349 y y y ruditapes_c32371 -4.371 0.098 eukaryotic translation initiation factor subunit h 5.678 1.299 y y y ruditapes_c38754 -4.619 0.098 endo- -beta-glucanase "/// 0000272 // polysaccharide catabolic process /// 0016798 // hydrolase activity, acting on glycosyl bonds" 5.464 1.183 y y y ruditapes_c29133 -8.895 0.098 3.884 0.437 y y y ruditapes_c23638 -15.566 0.098 3.335 0.214 y y y ruditapes2_c507 -1.442 0.099 51.018 35.386 y n y ruditapes_c15855 -1.528 0.099 38.935 25.486 y y y ruditapes2_c416 1.782 0.099 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 12.105 21.565 y y y ruditapes_c7578 -1.609 0.099 31.635 19.656 y y y ruditapes_c7340 -1.867 0.099 19.799 10.607 y y y ruditapes2_c968 -2.043 0.099 15.874 7.77 y y y ruditapes_c15818 -2.097 0.099 14.918 7.115 y y y ruditapes2_c1906 -2.181 0.099 13.725 6.293 y y y ruditapes2_c3456 -2.308 0.099 12.343 5.347 y y y ruditapes2_c60 -2.536 0.099 nadh dehydrogenase 1 beta subcomplex 9 10.446 4.118 y y y ruditapes_c14156 -2.749 0.099 9.275 3.374 y y y ruditapes_lrc35870 -3.256 0.099 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 7.464 2.292 y y y ruditapes2_c1257 -3.428 0.099 7.068 2.062 y y y ruditapes_c19539 -3.733 0.099 g patch domain containing 4 6.492 1.739 y y y ruditapes2_c1187 -3.953 0.099 6.167 1.56 y y y ruditapes_c14433 -4.324 0.099 5.712 1.321 y y y ruditapes_lrc34445 -5.408 0.099 nucleoside diphosphate kinase variant 1 /// 0005488 // binding /// 0009117 // nucleotide metabolic process 4.874 0.901 y y y ruditapes_c7255 -8.11 0.099 3.989 0.492 y y y ruditapes2_c1570 -1.268 0.1 114.759 90.529 y n y ruditapes_c18820 -1.465 0.1 46.699 31.871 y n y ruditapes2_c1668 -1.809 0.1 mitochondrial ribosomal protein l52 21.411 11.837 y y y ruditapes_lrc21179 -1.833 0.1 20.656 11.269 y y y ruditapes2_c1563 -1.91 0.1 18.533 9.701 y y y ruditapes_lrc14157 -2.036 0.1 15.846 7.781 y y y ruditapes_c11066 -2.113 0.1 14.65 6.935 y y y ruditapes_c22937 -2.196 0.1 13.491 6.143 y y y ruditapes_c845 -2.289 0.1 12.451 5.439 y y y ruditapes_c22905 -2.471 0.1 10.895 4.409 y y y ruditapes_lrc32372 7.78 0.1 galactoside- 3 /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 0.516 4.015 y y y ruditapes_c14380 -2.746 0.1 9.243 3.366 y y y ruditapes_c18546 -3.155 0.1 7.695 2.439 y y y ruditapes_c14596 -3.389 0.1 7.118 2.101 y y y ruditapes_c6389 -5.121 0.1 5.017 0.98 y y y ruditapes_lrc26425 -5.698 0.1 ependymin related protein-1 precursor 4.708 0.826 y y y ruditapes_c16815 -8.789 0.1 endonuclease reverse transcriptase 3.849 0.438 y y y ruditapes_c9464 -1.278 0.101 107.438 84.085 y n y ruditapes2_c3397 1.411 0.101 solute carrier family 25 (mitochondrial phosphate carrier) member 3 /// 0015293 // symporter activity /// 0005743 // mitochondrial inner membrane 36.942 52.117 y n y ruditapes_lrc8537 1.62 0.101 cytochrome oxidase subunit 1 17.818 28.858 y y y ruditapes_c14421 1.897 0.101 9.472 17.973 y y y ruditapes2_c1319 -1.64 0.101 29.162 17.785 y y y ruditapes_c28640 -1.69 0.101 26.337 15.584 y y y ruditapes2_lrc3943 -1.877 0.101 ependymin related protein-1 precursor 19.261 10.26 y y y ruditapes_c3066 -1.937 0.101 17.757 9.169 y y y ruditapes2_c2850 -2.024 0.101 15.964 7.888 y y y ruditapes2_c2844 -2.149 0.101 13.97 6.501 y y y ruditapes_c27179 -2.547 0.101 10.268 4.031 y y y ruditapes_lrc31415 ? 0.101 ribosomal protein s24 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0034101 // erythrocyte homeostasis /// 0005488 // binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0 2.683 y y y ruditapes_s39655 -3.227 0.101 7.468 2.315 y y y ruditapes2_c2679 -3.259 0.101 pol-like protein 7.378 2.264 y y y ruditapes_c29504 -3.847 0.101 6.248 1.624 y y y ruditapes_c7605 -5.075 0.101 5.012 0.988 y y y ruditapes2_c705 1.066 0.102 "1,025.88" "1,093.96" y n y ruditapes_c4665 -1.928 0.102 17.86 9.265 y y y ruditapes_c23353 -2.084 0.102 14.85 7.125 y y y ruditapes_c9491 -2.553 0.102 10.161 3.98 y y y ruditapes_c1607 -2.66 0.102 pol-like protein 9.588 3.605 y y y ruditapes_c35046 -3.066 0.102 7.896 2.575 y y y ruditapes2_c2 -3.469 0.102 6.856 1.976 y y y ruditapes_s37764 -6.41 0.102 beta-tubulin /// 0000166 // nucleotide binding /// 0007017 // microtubule-based process 4.36 0.68 y y y ruditapes_c22705 -1.448 0.103 48.701 33.634 y n y ruditapes_c15551 -1.461 0.103 46.534 31.855 y n y ruditapes_c1826 -1.573 0.103 33.698 21.43 y y y ruditapes_c11749 -1.753 0.103 23.119 13.185 y y y ruditapes_lrc34108 2.716 0.103 beta isoform cra_a 3.319 9.016 y y y ruditapes_c21124 -1.973 0.103 16.727 8.476 y y y ruditapes_c17766 4.407 0.103 1.229 5.417 y y y ruditapes_c5534 -2.37 0.103 eukaryotic translation initiation factor subunit e /// 0005634 // nucleus /// 0005515 // protein binding /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol 11.505 4.855 y y y ruditapes_c18096 -2.394 0.103 11.301 4.721 y y y ruditapes_lrc10237 -2.497 0.103 10.505 4.206 y y y ruditapes2_lrc3309 -2.606 0.103 translationally controlled tumor protein /// 0007275 // multicellular organismal development /// 0040007 // growth /// 0005488 // binding 9.812 3.766 y y y ruditapes_c18961 -4.67 0.103 5.264 1.127 y y y ruditapes_c30110 -4.936 0.103 5.051 1.023 y y y ruditapes_c11560 -4.977 0.103 5.035 1.012 y y y ruditapes_lrc38032 -7.561 0.103 nucleoside diphosphate kinase b /// 0005488 // binding /// 0009117 // nucleotide metabolic process 4.018 0.531 y y y ruditapes_c7728 -12.231 0.103 3.42 0.28 y y y ruditapes2_c386 -1.323 0.104 81.592 61.667 y n y ruditapes2_c636 -1.502 0.104 40.721 27.106 y y y ruditapes_c558 -1.57 0.104 33.698 21.462 y y y ruditapes2_c1512 -1.894 0.104 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 18.497 9.765 y y y ruditapes_c27094 -2.111 0.104 14.305 6.775 y y y ruditapes_c5917 -2.407 0.104 11.095 4.61 y y y ruditapes_lrc24040 -2.584 0.104 9.872 3.821 y y y ruditapes_c19937 -4.448 0.104 5.408 1.216 y y y ruditapes_lrc30824 -4.633 0.104 5.251 1.133 y y y ruditapes_c25399 -4.834 0.104 5.113 1.058 y y y ruditapes_c1417 -1.311 0.105 PREDICTED: hypothetical protein [Homo sapiens] 86.363 65.88 n n n ruditapes2_c2874 -1.37 0.105 65.12 47.525 n n n ruditapes2_c1930 1.444 0.105 31.527 45.523 n n n ruditapes_c14579 1.609 0.105 17.977 28.923 n y n ruditapes2_lrc5225 -1.546 0.105 35.758 23.13 n y n ruditapes2_c778 -1.591 0.105 31.908 20.06 n y n ruditapes_c8493 -1.836 0.105 20.045 10.919 n y n ruditapes_c27916 2.892 0.105 predicted protein [Nematostella vectensis] 2.823 8.163 n y n ruditapes_c23611 -2.16 0.105 13.567 6.28 n y n ruditapes_c27748 -2.257 0.105 12.418 5.502 n y n ruditapes2_c3036 -2.398 0.105 11.115 4.636 n y n ruditapes_c10046 -3.186 0.105 7.402 2.323 n y n ruditapes_c24147 -3.41 0.105 6.873 2.016 n y n ruditapes_c8866 -3.434 0.105 6.82 1.986 n y n ruditapes_c1632 -3.775 0.105 6.208 1.644 n y n ruditapes_c20337 -4.544 0.105 5.301 1.167 n y n ruditapes_c15968 -13.787 0.105 3.275 0.238 n y n ruditapes_c10153 -26.129 0.105 2.945 0.113 n y n ruditapes_c19646 1.808 0.106 10.988 19.862 n y n ruditapes2_c2089 -1.777 0.106 21.859 12.302 n y n ruditapes_c14476 -2.074 0.106 dna replication complex gins protein psf2 /// 0003711 // transcription elongation regulator activity /// 0006271 // DNA strand elongation during DNA replication /// 0005515 // protein binding /// 0005654 // nucleoplasm 14.693 7.083 n y n ruditapes2_c342 -2.133 0.106 13.863 6.5 n y n ruditapes_lrc23413 -2.154 0.106 13.516 6.276 n y n ruditapes_c9281 -2.318 0.106 11.705 5.05 n y n ruditapes_c9727 -2.446 0.106 10.68 4.366 n y n ruditapes_c16814 -2.938 0.106 8.145 2.773 n y n ruditapes_c9918 -2.957 0.106 8.084 2.734 n y n ruditapes_c26986 -3.069 0.106 7.717 2.514 n y n ruditapes_c18569 -3.281 0.106 7.131 2.174 n y n ruditapes_c30819 -3.29 0.106 nucleolar protein 12 /// 0005634 // nucleus /// 0003723 // RNA binding 7.111 2.161 n y n ruditapes_c28622 -3.36 0.106 proteasome subunit alpha type-3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 6.945 2.067 n y n ruditapes_c9470 -3.392 0.106 6.848 2.019 n y n ruditapes_c18132 -3.439 0.106 6.756 1.964 n y n ruditapes_c10980 -3.681 0.106 6.326 1.719 n y n ruditapes_c3614 -3.78 0.106 6.151 1.627 n y n ruditapes2_c1807 -4.163 0.106 5.659 1.359 n y n ruditapes_lrc21332 -7.227 0.106 4.021 0.556 n y n ruditapes_c317 -9.488 0.106 cell wall surface anchor family protein /// 0044464 // cell part 3.609 0.38 n y n ruditapes2_c838 -25.796 0.106 2.934 0.114 n y n ruditapes_c16227 -1.36 0.107 67.355 49.536 n n n ruditapes_c11636 -1.416 0.107 53.458 37.758 n n n ruditapes_c27034 -1.439 0.107 49.021 34.059 n n n ruditapes_c27259 -1.598 0.107 30.986 19.396 n y n ruditapes_c9442 -1.703 0.107 24.745 14.527 n y n ruditapes_c8028 -2.378 0.107 11.125 4.678 n y n ruditapes_c29597 -2.628 0.107 9.439 3.592 n y n ruditapes_c29606 -2.718 0.107 9.024 3.32 n y n ruditapes2_c445 -2.926 0.107 peroxiredoxin 6 8.147 2.785 n y n ruditapes_c31202 ? 0.107 0 2.599 n y n ruditapes_lrc32999 -4.924 0.107 sarcoplasmic calcium-binding protein 4.94 1.003 n y n ruditapes_c27578 -4.961 0.107 4.921 0.992 n y n ruditapes_c22359 1.665 0.108 15.164 25.251 n y n ruditapes_c8327 -1.735 0.108 23.206 13.375 n y n ruditapes2_c3197 -1.807 0.108 20.561 11.376 n y n ruditapes_c1689 2.324 0.108 4.833 11.234 n y n ruditapes_c3305 -1.856 0.108 ribosomal protein l35a /// 0044444 // cytoplasmic part /// 0042254 // ribosome biogenesis /// 0005488 // binding /// 0006412 // translation 19.034 10.256 n y n ruditapes_lrc32296 -2.339 0.108 11.439 4.891 n y n ruditapes_c21489 -3.172 0.108 7.301 2.302 n y n ruditapes_c13108 -3.357 0.108 6.851 2.041 n y n ruditapes_c8464 -4.225 0.108 tnf receptor-associated factor 6 /// 0042981 // regulation of apoptosis /// 0001503 // ossification /// 0050870 // positive regulation of T cell activation /// 0005624 // membrane fraction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II /// 0042088 // T-helper 1 type immune response /// 0001843 // neural tube closure /// 0005515 // protein binding /// 0007250 // activation of NF-kappaB-inducing kinase activity /// 0051023 // regulation of immunoglobulin secretion /// 0042475 // odontogenesis of dentine-containing tooth /// 0048661 // positive regulation of smooth muscle cell proliferation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0045410 // positive regulation of interleukin-6 biosynthetic process /// 0048468 // cell development /// 0032743 // positive regulation of interleukin-2 production /// 0008270 // zinc ion binding /// 0007254 // JNK cascade /// 0043011 // myeloid dendritic cell differentiation /// 0050852 // T cell receptor signaling pathway /// 0045084 // positive regulation of interleukin-12 biosynthetic process /// 0000209 // protein polyubiquitination /// 0004842 // ubiquitin-protein ligase activity /// 0002726 // positive regulation of T cell cytokine production /// 0019221 // cytokine-mediated signaling pathway /// 0004872 // receptor activity 5.52 1.306 n y n ruditapes_c23592 -5.312 0.108 4.685 0.882 n y n ruditapes_c3694 -5.904 0.108 4.407 0.746 n y n ruditapes_c8529 -? 0.108 2.578 0 n y n ruditapes_c7369 -1.692 0.109 25.016 14.786 n y n ruditapes_c16521 -1.707 0.109 24.27 14.219 n y n ruditapes_c8426 -1.869 0.109 18.573 9.938 n y n ruditapes_lrc35732 2.518 0.109 arginine kinase /// 0005515 // protein binding /// 0016301 // kinase activity 3.866 9.736 n y n ruditapes2_c1361 -1.901 0.109 17.758 9.34 n y n ruditapes2_c657 -2.057 0.109 14.711 7.151 n y n ruditapes_c12379 -2.171 0.109 13.072 6.02 n y n ruditapes_c27024 -2.364 0.109 11.128 4.708 n y n ruditapes2_c1941 -2.657 0.109 prenyl diphosphate subunit 2 /// 0046982 // protein heterodimerization activity /// 0006744 // ubiquinone biosynthetic process /// 0050878 // regulation of body fluid levels /// 0000010 // trans-hexaprenyltranstransferase activity /// 0008299 // isoprenoid biosynthetic process /// 0050347 // trans-octaprenyltranstransferase activity 9.2 3.462 n y n ruditapes_c20712 -2.905 0.109 8.104 2.79 n y n ruditapes_c16791 -2.946 0.109 7.955 2.7 n y n ruditapes_lrc17150 -3.681 0.109 6.209 1.687 n y n ruditapes_c21425 -4.139 0.109 5.598 1.353 n y n ruditapes_c11470 -6.091 0.109 4.291 0.705 n y n ruditapes_c25522 -1.707 0.11 24.257 14.21 n y n ruditapes_c16616 -1.765 0.11 21.761 12.331 n y n ruditapes_c7806 -1.926 0.11 17.135 8.898 n y n ruditapes2_c3924 2.766 0.11 ribosomal protein s14 /// 0006414 // translational elongation /// 0048027 // mRNA 5'-UTR binding /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0005730 // nucleolus /// 0005515 // protein binding /// 0045182 // translation regulator activity /// 0030218 // erythrocyte differentiation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0000028 // ribosomal small subunit assembly /// 0030490 // maturation of SSU-rRNA 3.052 8.442 n y n ruditapes_c19722 -2.181 0.11 12.895 5.912 n y n ruditapes_c29821 -2.186 0.11 12.857 5.881 n y n ruditapes_c633 -2.545 0.11 9.772 3.841 n y n ruditapes_lrc35566 -3.632 0.11 cystatin c 6.264 1.725 n y n ruditapes_lrc27029 -3.892 0.11 5.872 1.509 n y n ruditapes_c28133 -5.102 0.11 4.741 0.929 n y n ruditapes_lrc32347 -7.894 0.11 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 3.787 0.48 n y n ruditapes_c22702 -9.562 0.11 3.539 0.37 n y n ruditapes_c11850 -27.426 0.11 thioredoxin domain containing 4 2.849 0.104 n y n ruditapes_c28012 -1.399 0.111 55.858 39.928 n n n ruditapes2_c665 -1.444 0.111 sarcoplasmic calcium-binding protein 47.235 32.71 n n n ruditapes2_c889 -1.49 0.111 40.614 27.259 n n n ruditapes_c10935 -1.508 0.111 38.395 25.468 n y n ruditapes_c6175 -1.535 0.111 35.714 23.273 n y n ruditapes_c22308 -1.595 0.111 30.496 19.116 n y n ruditapes_c4584 -1.76 0.111 21.859 12.419 n y n ruditapes_c17759 -1.808 0.111 20.218 11.184 n y n ruditapes2_c1099 3.196 0.111 2.186 6.989 n y n ruditapes_c20367 -2.224 0.111 12.379 5.567 n y n ruditapes_c1331 -2.277 0.111 btb poz domain-containing protein kctd17 11.83 5.197 n y n ruditapes_c25903 -2.426 0.111 10.512 4.333 n y n ruditapes_c10004 -3.07 0.111 calmodulin 7.478 2.436 n y n ruditapes_c18251 -3.194 0.111 7.151 2.239 n y n ruditapes_c14817 -4.606 0.111 5.067 1.1 n y n ruditapes_c25858 -14.232 0.111 3.155 0.222 n y n ruditapes_c22013 -1.557 0.112 33.472 21.498 n y n ruditapes_c28020 -1.561 0.112 33.11 21.209 n y n ruditapes_lrc14228 -1.645 0.112 27.12 16.49 n y n ruditapes2_c2203 -1.88 0.112 17.965 9.554 n y n ruditapes_c5635 -2.015 0.112 15.122 7.505 n y n ruditapes_c29145 -2.669 0.112 8.98 3.365 n y n ruditapes_lrc13258 -3.221 0.112 7.034 2.184 n y n ruditapes_c14351 -3.88 0.112 5.802 1.495 n y n ruditapes_c12793 -4.221 0.112 5.396 1.278 n y n ruditapes_c9206 -4.276 0.112 5.356 1.252 n y n ruditapes_c7990 -5.559 0.112 4.459 0.802 n y n ruditapes_c14606 -7.413 0.112 3.854 0.52 n y n ruditapes2_c28 -1.28 0.113 cofi_ustma ame: full=cofilin ame: full=actin-depolymerizing factor 1 /// 0044424 // intracellular part 98.873 77.228 n n n ruditapes_c35450 -1.473 0.113 42.391 28.781 n n n ruditapes_c10930 -1.479 0.113 41.54 28.093 n n n ruditapes_c6306 -1.618 0.113 eukaryotic translation initiation factor subunit 6 interacting protein /// 0001650 // fibrillar center /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005737 // cytoplasm 28.598 17.674 n y n ruditapes_c17946 -1.917 0.113 17.02 8.88 n y n ruditapes_c16953 -1.975 0.113 15.858 8.03 n y n ruditapes_c15324 -2.068 0.113 14.177 6.854 n y n ruditapes_s36072 -2.405 0.113 intronic protein 259 /// 0009987 // cellular process /// 0005622 // intracellular 10.559 4.39 n y n ruditapes_lrc33051 6.173 0.113 kallikrein plasma (fletcher factor) 1 /// 0003824 // catalytic activity 0.67 4.134 n y n ruditapes_lrc18858 ? 0.113 0 2.508 n y n ruditapes_c27753 -3.158 0.113 7.147 2.263 n y n ruditapes_c13076 -3.374 0.113 6.643 1.969 n y n ruditapes_c16046 -4.022 0.113 5.582 1.388 n y n ruditapes_c785 -5.142 0.113 4.652 0.905 n y n ruditapes_c16043 -7.783 0.113 3.746 0.481 n y n ruditapes_c21408 -20.014 0.113 2.919 0.146 n y n ruditapes2_c1772 -1.729 0.114 22.729 13.145 n y n ruditapes_c11909 -1.928 0.114 16.721 8.671 n y n ruditapes_c4047 -2.102 0.114 13.64 6.489 n y n ruditapes_c5135 3.541 0.114 1.743 6.173 n y n ruditapes_c2149 -2.245 0.114 11.941 5.318 n y n ruditapes_c26652 -3.086 0.114 7.325 2.374 n y n ruditapes_c6641 -3.775 0.114 5.906 1.564 n y n ruditapes_lrc30434 -3.812 0.114 glutathione s-transferase c 5.825 1.528 n y n ruditapes_c19457 -4.077 0.114 5.491 1.347 n y n ruditapes_lrc28742 -24.461 0.114 2.831 0.116 n y n ruditapes_lrc35533 -1.678 0.115 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0005739 // mitochondrion 24.932 14.862 n y n ruditapes_lrc33880 -1.746 0.115 ribosomal protein l5 /// 0006414 // translational elongation /// 0005634 // nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding /// 0042273 // ribosomal large subunit biogenesis 21.851 12.513 n y n ruditapes_c1868 -1.804 0.115 calmodulin variant 1 /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 19.868 11.012 n y n ruditapes2_lrc5243 -1.977 0.115 15.627 7.906 n y n ruditapes2_c1708 -2.044 0.115 ubiquitin-activating enzyme e1 /// 0044267 // cellular protein metabolic process /// 0005634 // nucleus /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0005737 // cytoplasm 14.432 7.061 n y n ruditapes_c2660 -2.179 0.115 12.548 5.758 n y n ruditapes_c28144 -2.189 0.115 12.495 5.709 n y n ruditapes_c24829 -2.619 0.115 9.094 3.472 n y n ruditapes_c11169 -2.695 0.115 8.72 3.236 n y n ruditapes_lrc33947 -2.713 0.115 8.634 3.183 n y n ruditapes2_c744 -2.789 0.115 8.312 2.981 n y n ruditapes_lrc18427 -3.15 0.115 7.087 2.249 n y n ruditapes_c8478 -3.287 0.115 6.747 2.053 n y n ruditapes_c23450 -4.971 0.115 4.693 0.944 n y n ruditapes_c28483 -14.232 0.115 3.076 0.216 n y n ruditapes_c209 -1.29 0.116 eukaryotic translation initiation factor /// 0005524 // ATP binding /// 0051789 // response to protein stimulus /// 0003676 // nucleic acid binding /// 0009987 // cellular process /// 0044424 // intracellular part /// 0004386 // helicase activity 91.155 70.636 n n n ruditapes_lrc38353 -1.52 0.116 cathepsin l precursor 36.05 23.713 n y n ruditapes_c18566 -1.599 0.116 29.428 18.407 n y n ruditapes_c7351 -1.756 0.116 21.463 12.224 n y n ruditapes_c13427 -1.886 0.116 17.494 9.276 n y n ruditapes_c2103 -1.956 0.116 15.886 8.121 n y n ruditapes_c6116 -2.186 0.116 12.423 5.684 n y n ruditapes_c9997 -2.224 0.116 jumonji domain containing 1a /// 0046914 // transition metal ion binding /// 0007242 // intracellular signaling cascade /// 0045449 // regulation of transcription /// 0016568 // chromatin modification 12.014 5.403 n y n ruditapes2_c1802 -2.532 0.116 leucine rich repeat containing 23 9.546 3.77 n y n ruditapes_c24252 -2.751 0.116 8.407 3.056 n y n ruditapes2_c1490 -2.78 0.116 8.279 2.978 n y n ruditapes_lrc38626 -2.871 0.116 hypothetical protein BRAFLDRAFT_231170 [Branchiostoma floridae] 7.95 2.769 n y n ruditapes_c28299 -3.305 0.116 cytochrome family subfamily polypeptide 2 6.694 2.026 n y n ruditapes_c27739 -4.818 0.116 predicted protein [Nematostella vectensis] 4.771 0.99 n y n ruditapes2_lrc4211 -7.66 0.116 3.715 0.485 n y n ruditapes_lrc39197 -9.689 0.116 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 3.395 0.35 n y n ruditapes_c24868 -11.119 0.116 3.264 0.294 n y n ruditapes_c4725 -14.454 0.116 3.046 0.211 n y n ruditapes_c1279 -1.475 0.117 translation factor /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity /// 0006417 // regulation of translation 41.128 27.887 n n n ruditapes2_c1307 -1.484 0.117 cathepsin k /// 0005576 // extracellular region /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 40.055 26.986 n n n ruditapes2_c996 -1.662 0.117 25.483 15.33 n y n ruditapes_c14094 -1.708 0.117 23.281 13.629 n y n ruditapes_c2788 -1.736 0.117 22.027 12.685 n y n ruditapes2_c2523 -1.941 0.117 spermatogenesis associated factor /// 0005811 // lipid particle /// 0042052 // rhabdomere development /// 0016887 // ATPase activity /// 0005488 // binding /// 0006508 // proteolysis /// 0007317 // regulation of pole plasm oskar mRNA localization /// 0008104 // protein localization /// 0007029 // endoplasmic reticulum organization /// 0008103 // oocyte microtubule cytoskeleton polarization /// 0007030 // Golgi organization 16.129 8.309 n y n ruditapes2_c2723 -2.06 0.117 14.008 6.798 n y n ruditapes_s36358 -2.424 0.117 10.221 4.217 n y n ruditapes2_c367 -2.866 0.117 alanine racemase 7.911 2.76 n y n ruditapes_c20548 -3.131 0.117 7.057 2.253 n y n ruditapes_c7330 -3.892 0.117 5.622 1.445 n y n ruditapes_c19289 -4.373 0.117 5.119 1.171 n y n ruditapes_c28245 -16.308 0.117 2.966 0.182 n y n ruditapes_lrc33891 1.323 0.118 actin /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0000281 // cytokinesis after mitosis /// 0005856 // cytoskeleton /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0009792 // embryonic development ending in birth or egg hatching 51.897 68.676 n n n ruditapes_c10360 -1.46 0.118 43.095 29.519 n n n ruditapes_c17154 2.099 0.118 6.186 12.981 n y n ruditapes2_c398 -1.842 0.118 18.45 10.016 n y n ruditapes_c24614 -1.844 0.118 18.351 9.952 n y n ruditapes_c20802 -1.983 0.118 15.211 7.67 n y n ruditapes_c24039 -2.01 0.118 14.76 7.344 n y n ruditapes_lrc30615 -2.16 0.118 12.573 5.82 n y n ruditapes_c15982 -2.387 0.118 10.395 4.355 n y n ruditapes_lrc34016 -2.673 0.118 8.65 3.236 n y n ruditapes_c19138 -2.868 0.118 7.846 2.736 n y n ruditapes_c16173 -2.876 0.118 7.837 2.725 n y n ruditapes2_lrc5044 -3.092 0.118 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 7.141 2.309 n y n ruditapes_c8061 -3.156 0.118 6.973 2.209 n y n ruditapes_c15647 -3.29 0.118 6.648 2.021 n y n ruditapes2_c876 -3.428 0.118 translocase of outer mitochondrial membrane 7 homolog 6.349 1.852 n y n ruditapes_c24997 -3.592 0.118 6.04 1.681 n y n ruditapes_c26204 -3.918 0.118 5.565 1.42 n y n ruditapes_c27200 -4.028 0.118 5.438 1.35 n y n ruditapes_c25558 -4.048 0.118 5.413 1.337 n y n ruditapes_c24996 -4.055 0.118 5.404 1.333 n y n ruditapes_c15182 -4.775 0.118 4.753 0.996 n y n ruditapes_c31754 -6.203 0.118 hypothetical protein [Schistosoma mansoni] 4.049 0.653 n y n ruditapes_c17319 -7.042 0.118 3.815 0.542 n y n ruditapes_c30065 -7.251 0.118 3.755 0.518 n y n ruditapes_c13092 -7.356 0.118 3.739 0.508 n y n ruditapes_c24149 -7.783 0.118 3.652 0.469 n y n ruditapes_c7678 -1.471 0.119 41.275 28.067 n n n ruditapes_c17117 -1.476 0.119 40.629 27.525 n n n ruditapes_c13236 -1.673 0.119 24.631 14.72 n y n ruditapes2_c1463 2.017 0.119 6.973 14.067 n y n ruditapes_c14839 -1.7 0.119 23.375 13.754 n y n ruditapes_c19247 -2.224 0.119 11.806 5.309 n y n ruditapes2_c1116 5.936 0.119 peptidyl-prolyl cis-trans isomerase-like 1 0.69 4.094 n y n ruditapes_c4319 -2.558 0.119 9.217 3.603 n y n ruditapes_c25165 -3.099 0.119 serologically defined colon cancer antigen 1 7.071 2.282 n y n ruditapes2_c492 -3.959 0.119 5.5 1.389 n y n ruditapes2_c3179 -4.245 0.119 5.163 1.216 n y n ruditapes_c14386 -4.448 0.119 4.989 1.122 n y n ruditapes_c21549 -5.046 0.119 4.544 0.9 n y n ruditapes_c10264 -5.559 0.119 4.275 0.769 n y n ruditapes2_c114 -1.379 0.12 57.324 41.556 n n n ruditapes2_c2553 -1.613 0.12 27.82 17.246 n y n ruditapes_c21625 -1.722 0.12 22.268 12.934 n y n ruditapes2_c1754 -2.028 0.12 electron transfer flavoprotein subunit mitochondrial precursor /// 0050660 // FAD binding /// 0009055 // electron carrier activity 14.314 7.058 n y n ruditapes_c28702 -2.263 0.12 11.326 5.004 n y n ruditapes_c24432 -2.266 0.12 predicted protein [Nematostella vectensis] 11.329 5 n y n ruditapes_c18199 -2.268 0.12 11.286 4.977 n y n ruditapes_c29763 -2.301 0.12 11.01 4.784 n y n ruditapes_lrc34226 11.017 0.12 0.289 3.183 n y n ruditapes_c22708 -2.761 0.12 8.206 2.973 n y n ruditapes_c9283 -2.786 0.12 8.09 2.903 n y n ruditapes_c11953 -2.926 0.12 7.579 2.59 n y n ruditapes_c11209 -2.965 0.12 7.453 2.514 n y n ruditapes_c4352 -3.03 0.12 intracellular family /// 0016787 // hydrolase activity 7.253 2.393 n y n ruditapes_c2391 -3.336 0.12 6.451 1.934 n y n ruditapes_c22103 -3.521 0.12 6.098 1.732 n y n ruditapes_c23865 -4.13 0.12 5.262 1.274 n y n ruditapes_c25093 -9.173 0.12 3.393 0.37 n y n ruditapes2_lrc5779 -20.014 0.12 protein /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 2.815 0.141 n y n ruditapes2_lrc6670 -31.133 0.12 2.665 0.086 n y n ruditapes_lrc22464 -1.493 0.121 38.123 25.536 n n n ruditapes_c19223 -1.521 0.121 35.019 23.019 n y n ruditapes2_c2525 -1.522 0.121 34.829 22.877 n y n ruditapes_c11587 -1.691 0.121 23.53 13.914 n y n ruditapes_s35272 2.725 0.121 ribosomal protein l17 isoform 2 /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0000003 // reproduction /// 0040011 // locomotion /// 0005622 // intracellular /// 0009792 // embryonic development ending in birth or egg hatching 2.97 8.093 n y n ruditapes_c1727 -1.947 0.121 15.652 8.038 n y n ruditapes_c11627 -2.507 0.121 9.447 3.768 n y n ruditapes_c19436 -3.227 0.121 6.662 2.065 n y n ruditapes_c11992 -3.399 0.121 6.288 1.85 n y n ruditapes_c16080 -4.726 0.121 4.716 0.998 n y n ruditapes_c25322 -8.228 0.121 3.512 0.427 n y n ruditapes_c39727 -12.072 0.121 thyroid hormone receptor interactor 3 3.107 0.257 n y n ruditapes_s39650 -55.594 0.121 2.543 0.046 n y n ruditapes_lrc34905 -1.279 0.122 40s ribosomal protein s10 /// 0005840 // ribosome 94.547 73.935 n n n ruditapes2_c317 -1.432 0.122 46.382 32.386 n n n ruditapes_c20025 -1.544 0.122 32.646 21.141 n y n ruditapes_c10851 -1.753 0.122 20.844 11.89 n y n ruditapes_lrc35528 -2.145 0.122 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 12.498 5.827 n y n ruditapes2_c254 -2.3 0.122 10.905 4.741 n y n ruditapes_lrc12376 -2.306 0.122 10.858 4.71 n y n ruditapes_c22499 -2.314 0.122 10.763 4.652 n y n ruditapes2_c2277 -2.41 0.122 10.031 4.162 n y n ruditapes_c23793 -2.498 0.122 9.415 3.769 n y n ruditapes_c31122 -2.506 0.122 9.368 3.739 n y n ruditapes_lrc34855 -2.571 0.122 atp synthase subunit b 9.004 3.502 n y n ruditapes_c4101 -2.855 0.122 thioredoxin-like protein /// 0045454 // cell redox homeostasis 7.715 2.702 n y n ruditapes_c5879 -3.685 0.122 5.777 1.568 n y n ruditapes_lrc22979 -6.036 0.122 4.026 0.667 n y n ruditapes_c25631 -7.195 0.122 3.688 0.513 n y n ruditapes_lrc39434 -37.804 0.122 2.592 0.069 n y n ruditapes2_c99 -1.467 0.123 40.841 27.847 n n n ruditapes2_c1259 -1.483 0.123 tandem repeat galectin /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 38.881 26.226 n n n ruditapes_c18006 -1.587 0.123 29.199 18.394 n y n ruditapes_lrc26189 -1.722 0.123 21.915 12.729 n y n ruditapes_c25911 -1.788 0.123 transposase 19.482 10.895 n y n ruditapes_c24158 -1.792 0.123 19.374 10.812 n y n ruditapes_c27756 -1.842 0.123 17.962 9.751 n y n ruditapes_c9824 -1.987 0.123 14.739 7.419 n y n ruditapes_c2728 -2.06 0.123 13.592 6.599 n y n ruditapes_c15333 -2.119 0.123 12.757 6.022 n y n ruditapes_c20005 -2.194 0.123 11.88 5.414 n y n ruditapes_lrc34456 -2.253 0.123 mitochondrial ubiquinol cytochrome c reductase complex 11.288 5.011 n y n ruditapes_c22436 -2.994 0.123 7.236 2.417 n y n ruditapes_c30685 -3.089 0.123 6.948 2.249 n y n ruditapes_c6173 -3.851 0.123 5.512 1.431 n y n ruditapes_lrc34391 -5.096 0.123 serine protease cfsp3 /// 0016787 // hydrolase activity 4.431 0.87 n y n ruditapes2_lrc6662 -5.426 0.123 dynein light chain cytoplasmic /// 0030286 // dynein complex /// 0002119 // nematode larval development /// 0003774 // motor activity /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0009792 // embryonic development ending in birth or egg hatching 4.261 0.785 n y n ruditapes2_c4044 -6.764 0.123 stanniocalcin-like protein 3.773 0.558 n y n ruditapes2_c4149 -8.648 0.123 3.411 0.394 n y n ruditapes_c4040 1.242 0.124 cytochrome b /// 0006810 // transport /// 0005739 // mitochondrion /// 0016491 // oxidoreductase activity /// 0016021 // integral to membrane /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0022904 // respiratory electron transport chain 85.422 106.089 n n n ruditapes_c25418 -1.349 0.124 64.34 47.699 n n n ruditapes2_lrc5037 -1.415 0.124 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 48.851 34.517 n n n ruditapes2_c842 -1.465 0.124 40.856 27.887 n n n ruditapes_c5770 -1.559 0.124 31.026 19.897 n y n ruditapes2_c2865 -1.639 0.124 25.731 15.698 n y n ruditapes_c537 -1.779 0.124 integrator complex subunit 12 19.674 11.059 n y n ruditapes_lrc12521 -1.887 0.124 16.741 8.873 n y n ruditapes_c25688 -1.926 0.124 15.852 8.232 n y n ruditapes_c11154 -2.043 0.124 13.783 6.745 n y n ruditapes_lrc12104 -2.389 0.124 10.063 4.213 n y n ruditapes_c29520 -3.237 0.124 6.555 2.025 n y n ruditapes2_lrc3335 -3.792 0.124 5.549 1.463 n y n ruditapes_c15261 -4.055 0.124 5.237 1.292 n y n ruditapes_lrc32505 -4.289 0.124 mitochondrial ubiquinol cytochrome c reductase complex 5.002 1.166 n y n ruditapes_c30210 -6.671 0.124 3.783 0.567 n y n ruditapes_lrc11844 -7.307 0.124 3.615 0.495 n y n ruditapes_c13591 -1.349 0.125 63.977 47.426 n n n ruditapes2_c13 -1.522 0.125 34.25 22.505 n y n ruditapes_c8177 -1.552 0.125 31.466 20.276 n y n ruditapes_c28285 -1.577 0.125 29.62 18.788 n y n ruditapes_c25140 -1.593 0.125 28.445 17.859 n y n ruditapes_c14136 -1.595 0.125 28.22 17.689 n y n ruditapes_c8234 -1.657 0.125 24.645 14.871 n y n ruditapes_c21238 2.336 0.125 4.344 10.147 n y n ruditapes_lrc21743 -2.037 0.125 13.816 6.784 n y n ruditapes_c14104 -2.162 0.125 12.124 5.607 n y n ruditapes2_lrc4780 3.74 0.125 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 1.475 5.516 n y n ruditapes_c10676 -2.465 0.125 9.495 3.851 n y n ruditapes_c16893 -2.492 0.125 9.336 3.746 n y n ruditapes2_c5267 -2.939 0.125 7.333 2.496 n y n ruditapes_c10314 -4.178 0.125 5.081 1.216 n y n ruditapes_c12510 -6.565 0.125 3.786 0.577 n y n ruditapes2_lrc4599 -6.597 0.125 gm2 activator protein 3.788 0.574 n y n ruditapes_lrc19027 -11.119 0.125 3.113 0.28 n y n ruditapes_c20828 -14.454 0.125 2.907 0.201 n y n ruditapes_lrc35772 -? 0.125 2.349 0 n y n ruditapes_c8620 1.745 0.126 11.293 19.709 n y n ruditapes2_c3889 -1.581 0.126 nucleolar protein 5a /// 0005730 // nucleolus /// 0006364 // rRNA processing /// 0003723 // RNA binding 29.047 18.368 n y n ruditapes_c7964 -1.646 0.126 25.097 15.249 n y n ruditapes_c3549 2.198 0.126 5.142 11.304 n y n ruditapes2_c3579 2.597 0.126 3.253 8.448 n y n ruditapes2_lrc4108 -1.917 0.126 histone /// 0005811 // lipid particle /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0005700 // polytene chromosome /// 0000786 // nucleosome 15.86 8.275 n y n ruditapes2_c2481 -2.023 0.126 tgf beta-inducible nuclear protein 1 /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0006364 // rRNA processing 13.89 6.864 n y n ruditapes2_c1475 -2.21 0.126 prolyl-trna synthetase associated region 11.542 5.224 n y n ruditapes_c27929 17.987 0.126 0.154 2.765 n y n ruditapes2_lrc5818 -3.143 0.126 ppia protein /// 0046872 // metal ion binding /// 0003676 // nucleic acid binding /// 0016853 // isomerase activity 6.686 2.127 n y n ruditapes_c26611 -3.772 0.126 radial spoke head 9 homolog 5.538 1.468 n y n ruditapes_c7925 -3.862 0.126 5.42 1.403 n y n ruditapes_c22595 -4.003 0.126 5.23 1.306 n y n ruditapes_c28103 -15.566 0.126 2.846 0.183 n y n ruditapes_lrc19149 -? 0.126 2.344 0 n y n ruditapes2_c2242 -1.506 0.127 35.572 23.628 n y n ruditapes_c32040 -1.583 0.127 28.799 18.189 n y n ruditapes2_c17 -1.819 0.127 c16orf14 homolog 18.151 9.979 n y n ruditapes_c16510 -2.014 0.127 dynein heavy chain 14.029 6.967 n y n ruditapes2_c243 -2.123 0.127 12.466 5.872 n y n ruditapes_c26971 -2.224 0.127 11.328 5.094 n y n ruditapes2_lrc6391 6.7 0.127 0.549 3.676 n y n ruditapes_lrc15413 -2.589 0.127 8.696 3.359 n y n ruditapes_c18369 -2.815 0.127 7.685 2.73 n y n ruditapes_c20581 -3.089 0.127 6.8 2.202 n y n ruditapes2_lrc3887 -3.17 0.127 acyl carrier protein /// 0005739 // mitochondrion /// 0008152 // metabolic process 6.605 2.084 n y n ruditapes_c6201 -3.685 0.127 5.617 1.524 n y n ruditapes_c15667 -3.953 0.127 5.256 1.329 n y n ruditapes_c18970 -4.05 0.127 5.147 1.271 n y n ruditapes_c7014 -4.193 0.127 5.002 1.193 n y n ruditapes2_lrc5921 -1.379 0.128 ribosomal protein s17 55.096 39.954 n n n ruditapes_c12306 -1.887 0.128 16.396 8.686 n y n ruditapes2_c2247 -1.902 0.128 proteasome subunit beta type-2 /// 0044424 // intracellular part 16.043 8.435 n y n ruditapes_c11691 -2.05 0.128 13.36 6.516 n y n ruditapes_c17722 -2.583 0.128 8.665 3.354 n y n ruditapes_c6650 30.579 0.128 0.084 2.561 n y n ruditapes_c8418 -3.191 0.128 6.524 2.045 n y n ruditapes_c15162 -3.544 0.128 5.804 1.638 n y n ruditapes_c23168 -3.934 0.128 5.258 1.336 n y n ruditapes_c22756 -5.337 0.128 4.184 0.784 n y n ruditapes_c23646 -5.612 0.128 4.065 0.724 n y n ruditapes_c25851 -20.755 0.128 capping protein (actin filament) muscle z- beta /// 0051016 // barbed-end actin filament capping /// 0030027 // lamellipodium /// 0016020 // membrane /// 0003779 // actin binding /// 0008290 // F-actin capping protein complex /// 0030032 // lamellipodium assembly /// 0006928 // cell motion /// 0030863 // cortical cytoskeleton 2.685 0.129 n y n ruditapes_c1351 1.477 0.129 24.246 35.81 n n n ruditapes_c4432 -1.544 0.129 31.515 20.41 n y n ruditapes_c30567 -1.598 0.129 27.553 17.246 n y n ruditapes_c19268 -1.645 0.129 24.7 15.017 n y n ruditapes_c9090 -1.696 0.129 22.305 13.148 n y n ruditapes2_lrc1631 -1.706 0.129 21.905 12.84 n y n ruditapes2_lrc2466 -1.802 0.129 f-type h+-transporting atpase subunit f /// 0005811 // lipid particle 18.538 10.288 n y n ruditapes_c9734 -1.846 0.129 17.286 9.366 n y n ruditapes_c16702 -1.955 0.129 14.893 7.618 n y n ruditapes_lrc31877 -2.022 0.129 gamma-aminobutyric acid receptor-associated protein /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0005875 // microtubule associated complex /// 0005886 // plasma membrane /// 0015629 // actin cytoskeleton /// 0005764 // lysosome /// 0005874 // microtubule /// 0008017 // microtubule binding /// 0000226 // microtubule cytoskeleton organization /// 0004872 // receptor activity 13.711 6.78 n y n ruditapes2_c3776 -2.038 0.129 co-chaperone protein /// 0006950 // response to stress /// 0046872 // metal ion binding /// 0005515 // protein binding /// 0006457 // protein folding 13.484 6.615 n y n ruditapes_lrc23916 4.757 0.129 0.935 4.45 n y n ruditapes_c21016 -2.378 0.129 9.868 4.149 n y n ruditapes_c10615 -2.539 0.129 8.871 3.494 n y n ruditapes_c21039 -2.827 0.129 iq motif and ubiquitin domain containing 7.568 2.677 n y n ruditapes_c15963 -3.224 0.129 6.416 1.99 n y n ruditapes2_c2987 -5.816 0.129 3.963 0.681 n y n ruditapes_c17499 -7.869 0.129 3.425 0.435 n y n ruditapes_c21707 -1.272 0.13 95.186 74.859 n n n ruditapes_c5746 -1.507 0.13 34.86 23.138 n y n ruditapes2_c532 -1.513 0.13 34.19 22.6 n y n ruditapes_c5860 -1.522 0.13 33.368 21.931 n y n ruditapes_lrc38552 -1.561 0.13 cathepsin l /// 0008234 // cysteine-type peptidase activity 29.95 19.184 n y n ruditapes_c25683 -1.639 0.13 24.883 15.178 n y n ruditapes_c2809 -1.661 0.13 "PREDICTED: similar to predicted protein, partial [Hydra magnipapillata]" 23.842 14.354 n y n ruditapes_c25709 2.504 0.13 3.504 8.772 n y n ruditapes_c10943 -2.131 0.13 riken cdna 1700003m02 12.169 5.709 n y n ruditapes_c25352 -2.135 0.13 12.134 5.684 n y n ruditapes_c2536 -2.166 0.13 11.734 5.417 n y n ruditapes_c29182 -2.328 0.13 10.189 4.376 n y n ruditapes2_c878 -2.451 0.13 9.323 3.804 n y n ruditapes_c23300 -2.502 0.13 9.024 3.607 n y n ruditapes_lrc9238 -2.629 0.13 8.347 3.175 n y n ruditapes_c13087 -2.734 0.13 7.88 2.882 n y n ruditapes_c23021 -2.78 0.13 7.684 2.764 n y n ruditapes_c16381 -3.228 0.13 6.356 1.969 n y n ruditapes_c25231 -3.797 0.13 5.391 1.42 n y n ruditapes_c16834 -4.384 0.13 4.751 1.084 n y n ruditapes_c32068 -5.159 0.13 4.237 0.821 n y n ruditapes_c9333 -5.263 0.13 probable l-proline 4-hydroxylase 4.176 0.794 n y n ruditapes_c30495 -12.898 0.13 2.911 0.226 n y n ruditapes2_lrc6039 1.352 0.131 ribosomal protein s19 /// 0005622 // intracellular 41.398 55.963 n n n ruditapes_c2954 1.581 0.131 16.895 26.716 n y n ruditapes_lrc22513 1.658 0.131 protein /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 13.636 22.611 n y n ruditapes_c1999 -1.844 0.131 17.162 9.305 n y n ruditapes_lrc10748 -1.906 0.131 15.689 8.231 n y n ruditapes_c18666 -2.079 0.131 12.762 6.139 n y n ruditapes_lrc35799 4.797 0.131 0.911 4.368 n y n ruditapes_c4904 -2.572 0.131 8.582 3.337 n y n ruditapes_c17456 -2.687 0.131 8.03 2.988 n y n ruditapes_c4216 -2.846 0.131 7.393 2.597 n y n ruditapes_c14185 -2.885 0.131 7.29 2.527 n y n ruditapes_c7783 -2.946 0.131 7.074 2.401 n y n ruditapes_c3603 -3.077 0.131 mkiaa0417 protein 6.692 2.175 n y n ruditapes_c8637 -3.918 0.131 5.198 1.327 n y n ruditapes_c21460 -4.193 0.131 4.915 1.172 n y n ruditapes_c385 -4.559 0.131 harbinger transposase derived 1 4.598 1.009 n y n ruditapes_c26754 -5.312 0.131 4.143 0.78 n y n ruditapes_c7102 -5.374 0.131 ga19517- partial 4.112 0.765 n y n ruditapes_c2436 -1.365 0.132 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 57.409 42.063 n n n ruditapes_c12851 -1.61 0.132 26.279 16.323 n y n ruditapes2_c2872 -1.624 0.132 25.567 15.742 n y n ruditapes_c1310 -1.635 0.132 24.937 15.249 n y n ruditapes_c27559 -1.72 0.132 21.017 12.22 n y n ruditapes2_c733 -1.762 0.132 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 19.488 11.058 n y n ruditapes2_c885 -1.786 0.132 hypothetical protein [Plasmodium falciparum 3D7] 18.711 10.477 n y n ruditapes_c17512 -1.947 0.132 14.792 7.596 n y n ruditapes_c9058 -2.125 0.132 12.126 5.706 n y n ruditapes_c30508 4.347 0.132 1.075 4.674 n y n ruditapes_c28734 -2.276 0.132 10.54 4.63 n y n ruditapes_c19664 -2.29 0.132 10.422 4.55 n y n ruditapes_c8243 -2.343 0.132 9.99 4.264 n y n ruditapes_c11706 -2.642 0.132 8.203 3.105 n y n ruditapes_c8270 -3.018 0.132 6.842 2.267 n y n ruditapes_c9537 -3.877 0.132 5.226 1.348 n y n ruditapes_c12050 -4.096 0.132 ubiquitin-conjugating enzyme e2d 3 (ubc4 5 yeast) isoform cra_a /// 0030509 // BMP signaling pathway /// 0019787 // small conjugating protein ligase activity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0005515 // protein binding /// 0051276 // chromosome organization /// 0007140 // male meiosis /// 0016567 // protein ubiquitination /// 0007286 // spermatid development /// 0045676 // regulation of R7 cell differentiation /// 0007067 // mitosis 4.981 1.216 n y n ruditapes_lrc14456 -5.618 0.132 3.967 0.706 n y n ruditapes_c905 -5.863 0.132 peptidylprolyl isomerase /// 0005516 // calmodulin binding /// 0005773 // vacuole /// 0005528 // FK506 binding /// 0009611 // response to wounding /// 0003755 // peptidyl-prolyl cis-trans isomerase activity 3.889 0.663 n y n ruditapes_c15911 -7.413 0.132 3.445 0.465 n y n ruditapes_c24304 -10.674 0.132 3.028 0.284 n y n ruditapes_c22365 -20.755 0.132 2.625 0.126 n y n ruditapes_c25384 -? 0.132 2.273 0 n y n ruditapes_c15894 1.224 0.133 93.538 114.516 n n n ruditapes_c9040 -1.49 0.133 36.061 24.196 n n n ruditapes_c20060 -2.035 0.133 13.246 6.51 n y n ruditapes_c9901 -2.17 0.133 11.545 5.32 n y n ruditapes_lrc9739 -2.408 0.133 9.454 3.926 n y n ruditapes_c22494 -3.193 0.133 6.354 1.99 n y n ruditapes_c4455 -3.396 0.133 5.922 1.744 n y n ruditapes_c30820 -3.818 0.133 5.272 1.381 n y n ruditapes_c29621 -4.136 0.133 4.899 1.184 n y n ruditapes_c24750 -4.871 0.133 4.324 0.888 n y n ruditapes_c18062 -6.532 0.133 3.641 0.557 n y n ruditapes_c12525 -9.34 0.133 3.146 0.337 n y n ruditapes_c12166 -1.558 0.134 29.562 18.97 n y n ruditapes_lrc15692 1.779 0.134 10.083 17.934 n y n ruditapes_c26262 -1.747 0.134 19.746 11.301 n y n ruditapes_c13498 -1.906 0.134 15.461 8.112 n y n ruditapes_c22019 -1.937 0.134 14.855 7.669 n y n ruditapes_c8908 -1.948 0.134 14.607 7.498 n y n ruditapes2_lrc6230 -2.067 0.134 40s ribosomal protein s3 /// 0005515 // protein binding /// 0012505 // endomembrane system /// 0006412 // translation /// 0050794 // regulation of cellular process /// 0022627 // cytosolic small ribosomal subunit /// 0030425 // dendrite /// 0009790 // embryonic development 12.687 6.138 n y n ruditapes_c30897 -2.446 0.134 9.171 3.749 n y n ruditapes2_c2067 -2.474 0.134 9.004 3.639 n y n ruditapes_c19871 -2.708 0.134 7.802 2.88 n y n ruditapes_lrc24155 -2.912 0.134 7.078 2.431 n y n ruditapes_c29724 -2.965 0.134 6.916 2.332 n y n ruditapes_c15318 -3.448 0.134 cytidine deaminase /// 0005576 // extracellular region /// 0004126 // cytidine deaminase activity /// 0001882 // nucleoside binding /// 0019858 // cytosine metabolic process /// 0005829 // cytosol /// 0045980 // negative regulation of nucleotide metabolic process /// 0008270 // zinc ion binding /// 0051289 // protein homotetramerization /// 0009972 // cytidine deamination /// 0030308 // negative regulation of cell growth /// 0042803 // protein homodimerization activity 5.804 1.683 n y n ruditapes_c29662 -3.447 0.134 5.799 1.683 n y n ruditapes_c26331 -7.48 0.134 salivary c-type lectin /// 0003824 // catalytic activity /// 0005488 // binding 3.403 0.455 n y n ruditapes_lrc34070 1.633 0.135 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 14.285 23.322 n y n ruditapes_lrc33390 1.767 0.135 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 10.266 18.136 n y n ruditapes_lrc32151 -1.777 0.135 translationally controlled tumor protein 18.66 10.502 n y n ruditapes_c22874 -1.85 0.135 fatty acid amide hydrolase "/// 0044444 // cytoplasmic part /// 0004040 // amidase activity /// 0005624 // membrane fraction /// 0043231 // intracellular membrane-bounded organelle /// 0005543 // phospholipid binding /// 0009062 // fatty acid catabolic process /// 0012505 // endomembrane system /// 0016021 // integral to membrane /// 0016788 // hydrolase activity, acting on ester bonds /// 0017064 // fatty acid amide hydrolase activity /// 0042803 // protein homodimerization activity" 16.655 9.001 n y n ruditapes_c19426 -2.3 0.135 10.167 4.419 n y n ruditapes_lrc15418 15.289 0.135 0.178 2.721 n y n ruditapes_lrc13269 -3.449 0.135 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 5.76 1.67 n y n ruditapes_c10636 -4.245 0.135 4.765 1.123 n y n ruditapes_lrc35301 -10.917 0.135 2.967 0.272 n y n ruditapes_c4281 -1.499 0.136 34.487 23.007 n n n ruditapes_c2498 -1.523 0.136 32.163 21.111 n y n ruditapes_c14207 -1.55 0.136 30.008 19.364 n y n ruditapes_c15889 -1.737 0.136 19.895 11.457 n y n ruditapes_c4081 -1.741 0.136 19.777 11.357 n y n ruditapes2_c1260 2.315 0.136 ferritin /// 0016491 // oxidoreductase activity /// 0005506 // iron ion binding 4.192 9.705 n y n ruditapes2_c1350 -1.813 0.136 60s ribosomal protein l13a /// 0040007 // growth /// 0002119 // nematode larval development /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0009792 // embryonic development ending in birth or egg hatching 17.519 9.666 n y n ruditapes_c4619 2.408 0.136 cytochrome c oxidase subunit via polypeptide 1 3.772 9.082 n y n ruditapes2_c70 -1.913 0.136 cofilin actin-depolymerizing factor homolog /// 0005488 // binding /// 0005622 // intracellular 15.176 7.934 n y n ruditapes2_c1136 -2.009 0.136 13.423 6.683 n y n ruditapes_c4158 -2.011 0.136 13.428 6.678 n y n ruditapes2_lrc5296 -2.112 0.136 cytochrome b-c1 complex subunit mitochondrial precursor "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 12.046 5.705 n y n ruditapes_c18466 -2.152 0.136 11.557 5.371 n y n ruditapes2_c861 -2.16 0.136 glutathione s-transferase 11.471 5.311 n y n ruditapes2_c680 -2.433 0.136 9.174 3.771 n y n ruditapes_c9745 -3.953 0.136 5.019 1.27 n y n ruditapes_c9864 -4.178 0.136 4.784 1.145 n y n ruditapes_c25526 -4.606 0.136 4.449 0.966 n y n ruditapes_c11494 -5.357 0.136 4.009 0.748 n y n ruditapes_s36927 -14.454 0.136 2.747 0.19 n y n ruditapes_c26303 -? 0.136 2.225 0 n y n ruditapes2_c613 1.465 0.137 eukaryotic translation initiation factor subunit 2 36kda /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol 24.345 35.669 n n n ruditapes_c8980 -1.581 0.137 27.597 17.46 n y n ruditapes_c26870 -1.628 0.137 24.64 15.133 n y n ruditapes_c16971 -1.66 0.137 22.999 13.858 n y n ruditapes_c8263 -1.803 0.137 eukaryotic initiation factor 4a /// 0005524 // ATP binding /// 0006446 // regulation of translational initiation /// 0051789 // response to protein stimulus /// 0040007 // growth /// 0002119 // nematode larval development /// 0008026 // ATP-dependent helicase activity /// 0005515 // protein binding /// 0016281 // eukaryotic translation initiation factor 4F complex /// 0008340 // determination of adult lifespan /// 0040011 // locomotion /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0003723 // RNA binding /// 0044419 // interspecies interaction between organisms /// 0009792 // embryonic development ending in birth or egg hatching 17.764 9.855 n y n ruditapes_c20361 -1.824 0.137 17.117 9.383 n y n ruditapes_lrc39388 -1.89 0.137 15.573 8.242 n y n ruditapes_c10076 -1.964 0.137 14.148 7.203 n y n ruditapes_lrc6897 -2.035 0.137 12.985 6.382 n y n ruditapes_lrc38375 3.352 0.137 1.722 5.772 n y n ruditapes_c3007 -2.161 0.137 11.4 5.275 n y n ruditapes_c12215 -2.68 0.137 galactose-1-phosphate uridylyltransferase /// 0008270 // zinc ion binding /// 0008108 // UDP-glucose:hexose-1-phosphate uridylyltransferase activity /// 0006012 // galactose metabolic process 7.826 2.92 n y n ruditapes_c20374 -2.941 0.137 6.866 2.335 n y n ruditapes_lrc35325 -3.13 0.137 elegans protein confirmed by transcript evidence "/// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0015992 // proton transport /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0000003 // reproduction /// 0005515 // protein binding /// 0046034 // ATP metabolic process /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008340 // determination of adult lifespan /// 0009792 // embryonic development ending in birth or egg hatching" 6.364 2.033 n y n ruditapes_c20494 -3.892 0.137 5.065 1.302 n y n ruditapes_c26214 -4.317 0.137 4.653 1.078 n y n ruditapes_lrc11984 -6.115 0.137 dynein light chain cytoplasmic /// 0030286 // dynein complex /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 3.7 0.605 n y n ruditapes_lrc21153 -6.857 0.137 3.495 0.51 n y n ruditapes_c11468 -1.316 0.138 70.592 53.645 n n n ruditapes_c9517 -1.643 0.138 23.804 14.491 n y n ruditapes_c30418 1.972 0.138 6.78 13.371 n y n ruditapes_lrc10496 2.11 0.138 5.462 11.523 n y n ruditapes_s38158 -2.468 0.138 ribosomal protein l35 /// 0007275 // multicellular organismal development /// 0051726 // regulation of cell cycle /// 0005488 // binding /// 0005840 // ribosome /// 0006412 // translation /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 8.864 3.591 n y n ruditapes_c27071 -2.468 0.138 8.858 3.589 n y n ruditapes_c7379 -2.674 0.138 ribosomal protein /// 0030529 // ribonucleoprotein complex 7.801 2.918 n y n ruditapes_c14356 -3.142 0.138 6.309 2.008 n y n ruditapes_lrc34674 -3.235 0.138 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 6.085 1.881 n y n ruditapes_c28790 -3.307 0.138 5.955 1.801 n y n ruditapes2_c2474 -3.572 0.138 5.464 1.53 n y n ruditapes_c15221 -3.688 0.138 5.3 1.437 n y n ruditapes_c29350 -4.448 0.138 4.512 1.014 n y n ruditapes_c6317 -4.688 0.138 microsomal glutathione s-transferase 1 /// 0033327 // Leydig cell differentiation /// 0005778 // peroxisomal membrane /// 0042493 // response to drug /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005634 // nucleus /// 0032496 // response to lipopolysaccharide /// 0045177 // apical part of cell /// 0005743 // mitochondrial inner membrane /// 0005783 // endoplasmic reticulum /// 0005792 // microsome /// 0010243 // response to organic nitrogen /// 0042803 // protein homodimerization activity 4.335 0.925 n y n ruditapes_lrc28588 -5.718 0.138 mitochondrial 50s ribosomal protein 3.807 0.666 n y n ruditapes_c26515 -? 0.138 seraf-like protein 2.2 0 n y n ruditapes2_c2371 -1.382 0.139 51.523 37.285 n n n ruditapes2_lrc3157 1.518 0.139 s-adenosylhomocysteine hydrolase 19.94 30.27 n y n ruditapes_c24565 -1.475 0.139 36.653 24.851 n n n ruditapes_lrc28378 -1.563 0.139 28.484 18.23 n y n ruditapes_c17883 -1.837 0.139 16.638 9.059 n y n ruditapes_c28347 -1.888 0.139 15.448 8.18 n y n ruditapes2_lrc4426 3.498 0.139 1.569 5.487 n y n ruditapes2_lrc4643 -2.176 0.139 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 11.084 5.092 n y n ruditapes_c13533 -2.297 0.139 10.025 4.365 n y n ruditapes_c25958 -2.324 0.139 9.772 4.205 n y n ruditapes_c19653 -2.552 0.139 8.33 3.264 n y n ruditapes_c16209 -2.985 0.139 6.687 2.24 n y n ruditapes_c2614 -3.177 0.139 6.197 1.951 n y n ruditapes_c21235 -3.466 0.139 5.615 1.62 n y n ruditapes_c4483 -4.551 0.139 4.406 0.968 n y n ruditapes2_c2786 -7.227 0.139 chromosome 1 open reading frame 31 3.376 0.467 n y n ruditapes_c16907 -8.154 0.139 3.196 0.392 n y n ruditapes_c28914 -13.343 0.139 2.756 0.207 n y n ruditapes2_lrc4806 -1.325 0.14 actin /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0000281 // cytokinesis after mitosis /// 0005856 // cytoskeleton /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0009792 // embryonic development ending in birth or egg hatching 66.487 50.167 n n n ruditapes_c1319 -1.381 0.14 51.402 37.232 n n n ruditapes2_lrc3687 -1.557 0.14 tandem repeat galectin 28.863 18.542 n y n ruditapes_c16509 -1.614 0.14 25.033 15.511 n y n ruditapes2_lrc4669 1.936 0.14 7.142 13.831 n y n ruditapes_c17704 -1.661 0.14 22.671 13.653 n y n ruditapes2_c2219 -1.684 0.14 21.6 12.829 n y n ruditapes_c3002 -1.946 0.14 14.191 7.293 n y n ruditapes2_c513 3.55 0.14 1.515 5.378 n y n ruditapes_c7089 -2.384 0.14 9.31 3.905 n y n ruditapes_c18705 -2.571 0.14 cold shock domain-containing protein e1 (unr protein) (n-ras upstream gene protein) 8.202 3.19 n y n ruditapes_c11818 -2.59 0.14 8.111 3.132 n y n ruditapes_lrc21137 -2.965 0.14 6.711 2.264 n y n ruditapes_c9461 -3.451 0.14 5.612 1.626 n y n ruditapes_c25249 -3.907 0.14 4.976 1.274 n y n ruditapes_c18289 -4.014 0.14 4.851 1.209 n y n ruditapes_c976 -4.781 0.14 4.239 0.887 n y n ruditapes_c23604 -8.228 0.14 3.174 0.386 n y n ruditapes_lrc6884 -9.213 0.14 3.047 0.331 n y n ruditapes2_lrc6194 -1.336 0.141 ribosomal protein s14e /// 0005811 // lipid particle /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 62.784 47.008 n n n ruditapes_c2368 -1.449 0.141 39.552 27.291 n n n ruditapes_lrc32494 1.648 0.141 laminin receptor 1 /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0004872 // receptor activity 13.294 21.906 n y n ruditapes_c2972 -1.669 0.141 22.105 13.247 n y n ruditapes2_c3072 -1.764 0.141 18.546 10.514 n y n ruditapes_c10514 -1.804 0.141 17.303 9.592 n y n ruditapes2_c3061 -1.879 0.141 15.453 8.223 n y n ruditapes2_lrc3485 -1.934 0.141 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 14.361 7.426 n y n ruditapes_c11872 -1.935 0.141 14.321 7.4 n y n ruditapes2_lrc3840 2.742 0.141 transcription factor btf3 homolog 4 2.643 7.246 n y n ruditapes_c7974 3.127 0.141 1.953 6.108 n y n ruditapes_lrc14895 -2.126 0.141 11.566 5.441 n y n ruditapes2_c1087 -2.16 0.141 11.154 5.164 n y n ruditapes_c21172 -2.164 0.141 11.112 5.136 n y n ruditapes_c20860 -2.39 0.141 9.204 3.852 n y n ruditapes2_c2101 -2.429 0.141 orf2-encoded protein 8.967 3.691 n y n ruditapes2_c5769 -2.69 0.141 prefoldin subunit 1 /// 0003700 // transcription factor activity /// 0016272 // prefoldin complex /// 0005886 // plasma membrane /// 0007049 // cell cycle /// 0051082 // unfolded protein binding /// 0006457 // protein folding 7.622 2.834 n y n ruditapes_c17058 -2.757 0.141 7.339 2.661 n y n ruditapes_c12097 -3.262 0.141 5.956 1.826 n y n ruditapes_c13084 -3.987 0.141 4.852 1.217 n y n ruditapes_c23283 -? 0.141 2.164 0 n y n ruditapes_lrc32261 -1.232 0.142 ribosomal protein l6 /// 0030529 // ribonucleoprotein complex /// 0043232 // intracellular non-membrane-bounded organelle /// 0005737 // cytoplasm 117.569 95.43 n n n ruditapes_c3224 -1.789 0.142 17.654 9.87 n y n ruditapes_lrc8347 -2.239 0.142 10.365 4.63 n y n ruditapes_c18987 -2.669 0.142 7.654 2.868 n y n ruditapes_c18873 -2.683 0.142 7.61 2.837 n y n ruditapes_c7994 -2.705 0.142 7.52 2.78 n y n ruditapes_c18969 -2.965 0.142 6.619 2.232 n y n ruditapes_c5522 -2.965 0.142 6.617 2.232 n y n ruditapes_c29530 -8.04 0.142 pb1 protein /// 0006350 // transcription /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0000228 // nuclear chromosome /// 0006338 // chromatin remodeling /// 0003682 // chromatin binding /// 0007067 // mitosis 3.168 0.394 n y n ruditapes_c15230 -8.617 0.142 3.088 0.358 n y n ruditapes_c27048 -12.601 0.142 2.751 0.218 n y n ruditapes_lrc10693 -17.234 0.142 2.573 0.149 n y n ruditapes2_c343 -1.308 0.143 elegans protein confirmed by transcript evidence "/// 0005524 // ATP binding /// 0005759 // mitochondrial matrix /// 0043499 // eukaryotic cell surface binding /// 0005811 // lipid particle /// 0006200 // ATP catabolic process /// 0002119 // nematode larval development /// 0006172 // ADP biosynthetic process /// 0040010 // positive regulation of growth rate /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0043531 // ADP binding /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0006911 // phagocytosis, engulfment /// 0008340 // determination of adult lifespan /// 0007286 // spermatid development /// 0001937 // negative regulation of endothelial cell proliferation /// 0042288 // MHC class I protein binding /// 0009792 // embryonic development ending in birth or egg hatching" 71.654 54.775 n n n ruditapes_lrc32584 -1.812 0.143 ribosomal protein l26e /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 16.902 9.328 n y n ruditapes2_c1589 -1.817 0.143 16.835 9.265 n y n ruditapes_c10095 -2.413 0.143 8.982 3.723 n y n ruditapes_c28239 -2.578 0.143 8.049 3.123 n y n ruditapes_c3449 17.538 0.143 0.145 2.548 n y n ruditapes_c12010 -3.002 0.143 6.485 2.16 n y n ruditapes_c3754 -4.191 0.143 4.617 1.102 n y n ruditapes_c713 -4.319 0.143 bactin1 protein "/// 0005524 // ATP binding /// 0042643 // actomyosin, actin part /// 0016887 // ATPase activity /// 0030240 // muscle thin filament assembly /// 0031674 // I band /// 0030048 // actin filament-based movement /// 0006915 // apoptosis /// 0060047 // heart contraction /// 0017022 // myosin binding /// 0055003 // cardiac myofibril assembly /// 0055008 // cardiac muscle tissue morphogenesis" 4.509 1.044 n y n ruditapes_c8507 -9.117 0.143 3.006 0.33 n y n ruditapes_c27800 -26.685 0.143 2.409 0.09 n y n ruditapes2_c2160 -1.255 0.144 98.915 78.845 n n n ruditapes2_c1392 -1.767 0.144 alpha 3d /// 0005929 // cilium /// 0005932 // microtubule basal body /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 18.184 10.289 n y n ruditapes_c11132 -1.772 0.144 18.026 10.173 n y n ruditapes_c2741 -1.821 0.144 16.66 9.151 n y n ruditapes_c16747 -2.05 0.144 12.35 6.026 n y n ruditapes_c15717 -2.083 0.144 11.899 5.712 n y n ruditapes_c24768 4.176 0.144 1.087 4.538 n y n ruditapes_c1407 -2.295 0.144 9.776 4.261 n y n ruditapes_c13623 -2.663 0.144 7.637 2.868 n y n ruditapes_c14316 -2.729 0.144 7.344 2.691 n y n ruditapes_c13292 -2.911 0.144 6.718 2.308 n y n ruditapes_c25627 -2.95 0.144 6.612 2.241 n y n ruditapes_c11296 -3.401 0.144 5.586 1.642 n y n ruditapes_c13787 -3.742 0.144 5.079 1.357 n y n ruditapes_c24904 -3.82 0.144 ubiquitously transcribed tetratricopeptide x chromosome 4.98 1.303 n y n ruditapes_c30304 -4.13 0.144 4.659 1.128 n y n ruditapes_c15570 -4.189 0.144 4.588 1.095 n y n ruditapes_c4213 -4.225 0.144 4.554 1.078 n y n ruditapes_c23429 -5.436 0.144 3.812 0.701 n y n ruditapes2_c1531 -6.449 0.144 3.465 0.537 n y n ruditapes_c23477 -6.671 0.144 3.404 0.51 n y n ruditapes_c15093 -6.894 0.144 3.358 0.487 n y n ruditapes_c32045 -? 0.144 2.131 0 n y n ruditapes2_c767 -1.562 0.145 small nuclear ribonucleoprotein e /// 0000245 // spliceosome assembly /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 27.679 17.717 n y n ruditapes_c11126 -1.843 0.145 tubulin-specific chaperone a /// 0007023 // post-chaperonin tubulin folding pathway /// 0051087 // chaperone binding /// 0007021 // tubulin complex assembly /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0051082 // unfolded protein binding 16.026 8.695 n y n ruditapes_c15021 -1.851 0.145 methyltransferase like 10 15.782 8.526 n y n ruditapes_c19923 -1.944 0.145 eukaryotic translation initiation factor 5a-2 /// 0008283 // cell proliferation /// 0006413 // translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0008612 // peptidyl-lysine modification to hypusine 13.907 7.154 n y n ruditapes_lrc32403 3.831 0.145 retinoid- and fatty-acid binding protein cg11064-pa isoform 1 1.274 4.879 n y n ruditapes_c23253 -2.224 0.145 10.303 4.633 n y n ruditapes_c32094 -2.62 0.145 7.779 2.969 n y n ruditapes_c21740 -22.979 0.145 2.426 0.106 n y n ruditapes_c30799 1.546 0.146 17.532 27.1 n y n ruditapes_c2760 -1.613 0.146 24.34 15.085 n y n ruditapes_c26640 2.017 0.146 6.046 12.196 n y n ruditapes_c3058 -1.826 0.146 16.343 8.949 n y n ruditapes_c24809 -1.973 0.146 13.37 6.777 n y n ruditapes2_c2563 -2.125 0.146 lipoma hmgic fusion partner-like 3 11.296 5.315 n y n ruditapes_c28470 -2.257 0.146 10.008 4.435 n y n ruditapes_c17970 -2.319 0.146 9.49 4.092 n y n ruditapes_c12294 -2.394 0.146 polymerase i polypeptide 30kda /// 0006350 // transcription /// 0005654 // nucleoplasm 8.952 3.74 n y n ruditapes_c19453 -3.131 0.146 6.083 1.943 n y n ruditapes_c21753 -3.984 0.146 4.739 1.189 n y n ruditapes_c29925 -4.17 0.146 4.566 1.095 n y n ruditapes_c21346 -4.633 0.146 homolog 1 4.205 0.908 n y n ruditapes_c26949 -5.782 0.146 3.648 0.631 n y n ruditapes2_c5552 -8.228 0.146 toxin i 3.078 0.374 n y n ruditapes_c24386 -16.122 0.146 2.557 0.159 n y n ruditapes_c19754 -1.409 0.147 44.493 31.58 n n n ruditapes_c5034 -1.413 0.147 malate dehydrogenase nad /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0005488 // binding /// 0006096 // glycolysis /// 0005829 // cytosol 43.649 30.882 n n n ruditapes_c11423 -1.607 0.147 24.568 15.292 n y n ruditapes_lrc14718 -1.816 0.147 16.517 9.094 n y n ruditapes_c13132 -1.849 0.147 15.709 8.497 n y n ruditapes_lrc33487 -1.909 0.147 ependymin related protein-1 precursor 14.442 7.565 n y n ruditapes_c27004 -2.022 0.147 12.533 6.199 n y n ruditapes2_lrc6755 -2.545 0.147 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 8.062 3.168 n y n ruditapes_c13278 -2.674 0.147 7.478 2.797 n y n ruditapes_c18753 -2.689 0.147 7.4 2.752 n y n ruditapes_c23802 -3.224 0.147 5.833 1.809 n y n ruditapes_c15929 -3.401 0.147 5.509 1.62 n y n ruditapes_c14600 -4.144 0.147 4.571 1.103 n y n ruditapes_c27577 -5.115 0.147 3.903 0.763 n y n ruditapes_lrc32021 -17.79 0.147 2.494 0.14 n y n ruditapes2_c506 -1.36 0.148 54.26 39.901 n n n ruditapes2_c503 -1.456 0.148 37.386 25.678 n n n ruditapes_lrc36260 1.694 0.148 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 11.431 19.369 n y n ruditapes2_lrc4357 1.765 0.148 9.677 17.085 n y n ruditapes2_c2152 -1.576 0.148 26.407 16.753 n y n ruditapes_c9910 -1.663 0.148 21.572 12.968 n y n ruditapes2_c672 -1.677 0.148 21.018 12.53 n y n ruditapes_lrc34775 -1.933 0.148 13.901 7.19 n y n ruditapes_c28635 -2.013 0.148 12.602 6.262 n y n ruditapes_c12138 -2.135 0.148 11.041 5.171 n y n ruditapes2_c369 -2.81 0.148 universal stress protein 6.917 2.462 n y n ruditapes_c29188 -2.908 0.148 6.608 2.272 n y n ruditapes_c29758 -3.113 0.148 6.055 1.945 n y n ruditapes_c18151 -3.207 0.148 tctex1 domain containing 2 5.846 1.823 n y n ruditapes_c29692 -4.181 0.148 4.506 1.078 n y n ruditapes2_c3033 -4.892 0.148 4.012 0.82 n y n ruditapes_c20957 -6.671 0.148 3.351 0.502 n y n ruditapes_c25937 -17.79 0.148 2.484 0.14 n y n ruditapes_c3098 -1.683 0.149 20.712 12.309 n y n ruditapes_c15090 -1.786 0.149 17.121 9.585 n y n ruditapes_c22136 -2.006 0.149 12.656 6.309 n y n ruditapes2_c2816 -2.147 0.149 stomatin -like 2 /// 0043229 // intracellular organelle /// 0005737 // cytoplasm 10.872 5.065 n y n ruditapes_c27531 -2.446 0.149 8.522 3.484 n y n ruditapes_c17777 -2.451 0.149 8.487 3.463 n y n ruditapes_c6343 -2.575 0.149 7.812 3.034 n y n ruditapes_c19591 -2.594 0.149 7.744 2.985 n y n ruditapes_c18836 -3.745 0.149 4.939 1.319 n y n ruditapes_c28344 -4.077 0.149 4.585 1.125 n y n ruditapes_c23296 -7.66 0.149 3.129 0.408 n y n ruditapes_lrc38852 -8.006 0.149 3.075 0.384 n y n ruditapes_c30728 -15.566 0.149 2.533 0.163 n y n ruditapes_c25896 -1.574 0.15 26.171 16.626 n y n ruditapes2_c1203 -1.601 0.15 24.614 15.376 n y n ruditapes2_c3700 -1.836 0.15 15.743 8.577 n y n ruditapes_c26643 -1.877 0.15 14.822 7.895 n y n ruditapes_c22539 -1.922 0.15 13.96 7.265 n y n ruditapes_c8075 -2.381 0.15 8.858 3.721 n y n ruditapes_c23748 -2.883 0.15 6.623 2.298 n y n ruditapes_c17832 -4.448 0.15 4.244 0.954 n y n ruditapes_c20767 -4.625 0.15 4.129 0.893 n y n ruditapes_c28643 -7.624 0.15 3.12 0.409 n y n ruditapes_lrc34823 -15.937 0.15 2.51 0.157 n y n ruditapes_c20148 -17.234 0.15 proline-serine-threonine phosphatase interacting protein 1 /// 0001725 // stress fiber /// 0019903 // protein phosphatase binding /// 0003779 // actin binding /// 0009987 // cellular process /// 0005826 // contractile ring 2.472 0.143 n y n ruditapes_c13333 -1.31 0.151 68.153 52.014 n n n ruditapes2_c73 -1.754 0.151 lectin galactoside-binding soluble 4 /// 0005529 // sugar binding /// 0009987 // cellular process 17.978 10.251 n y n ruditapes_c16703 -1.782 0.151 17.062 9.573 n y n ruditapes_c24936 -1.927 0.151 13.767 7.143 n y n ruditapes_c28412 5.565 0.151 0.646 3.594 n y n ruditapes2_c1050 -2.443 0.151 8.426 3.449 n y n ruditapes_c7052 -2.774 0.151 6.936 2.501 n y n ruditapes2_c204 37.324 0.151 0.06 2.23 n y n ruditapes_c7624 -3.197 0.151 5.778 1.807 n y n ruditapes_c11175 -3.583 0.151 5.117 1.428 n y n ruditapes_c22813 -5.189 0.151 3.796 0.732 n y n ruditapes_c21462 -6.5 0.151 transposase 3.335 0.513 n y n ruditapes_c27557 -6.671 0.151 3.287 0.493 n y n ruditapes_c23180 -14.454 0.151 2.544 0.176 n y n ruditapes_c30652 -? 0.151 2.062 0 n y n ruditapes_lrc33978 -1.217 0.152 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 126.367 103.85 n n n ruditapes_c27908 2.437 0.152 3.368 8.208 n y n ruditapes_c14681 -1.912 0.152 13.986 7.315 n y n ruditapes2_c2885 -2.033 0.152 12.089 5.945 n y n ruditapes2_c2048 3.822 0.152 1.233 4.713 n y n ruditapes_c6804 -2.214 0.152 10.064 4.546 n y n ruditapes_c11392 -2.271 0.152 9.563 4.21 n y n ruditapes_c16269 -2.28 0.152 9.51 4.171 n y n ruditapes_c6691 -2.77 0.152 6.921 2.498 n y n ruditapes_c7524 -6.329 0.152 3.362 0.531 n y n ruditapes_c10696 -7.356 0.152 3.129 0.425 n y n ruditapes2_c760 -1.188 0.153 162.385 136.665 n n n ruditapes2_c1759 -1.362 0.153 52.473 38.525 n n n ruditapes_lrc37046 1.469 0.153 ribosomal protein s11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 22.09 32.457 n n n ruditapes2_c1489 -1.404 0.153 calmodulin 3b (phosphorylase delta) 44.015 31.359 n n n ruditapes_c10010 -1.547 0.153 27.72 17.914 n y n ruditapes_c22838 -1.577 0.153 25.634 16.258 n y n ruditapes_lrc33039 -1.887 0.153 cathepsin l /// 0008234 // cysteine-type peptidase activity 14.45 7.657 n y n ruditapes_c9624 -2.18 0.153 10.349 4.748 n y n ruditapes_c4873 -2.274 0.153 9.5 4.177 n y n ruditapes_c8753 -2.3 0.153 9.299 4.044 n y n ruditapes_c1767 -2.354 0.153 8.926 3.792 n y n ruditapes_lrc32387 5.811 0.153 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.599 3.478 n y n ruditapes2_c2141 -2.766 0.153 6.905 2.497 n y n ruditapes_c7901 -2.869 0.153 deleted in malignant brain tumors 1 6.57 2.29 n y n ruditapes_c30105 -3.079 0.153 6.003 1.95 n y n ruditapes_lrc27056 -3.147 0.153 5.841 1.856 n y n ruditapes_c14969 -3.558 0.153 5.113 1.437 n y n ruditapes_c26096 -4.003 0.153 4.572 1.142 n y n ruditapes_c24846 -5.42 0.153 3.657 0.675 n y n ruditapes2_c440 -1.364 0.154 viral a-type inclusion protein repeat containing protein /// 0017124 // SH3 domain binding 51.801 37.988 n n n ruditapes_c11970 -1.724 0.154 actin related protein 2 3 complex subunit 2 /// 0005200 // structural constituent of cytoskeleton /// 0005925 // focal adhesion /// 0003779 // actin binding /// 0030838 // positive regulation of actin filament polymerization /// 0005885 // Arp2/3 protein complex /// 0042995 // cell projection /// 0031252 // cell leading edge /// 0005737 // cytoplasm /// 0006928 // cell motion 18.648 10.817 n y n ruditapes_c28381 2.762 0.154 2.435 6.726 n y n ruditapes_c19063 -2.24 0.154 9.728 4.343 n y n ruditapes_c7907 -2.301 0.154 9.252 4.021 n y n ruditapes_c4465 -2.352 0.154 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0032981 // mitochondrial respiratory chain complex I assembly /// 0006810 // transport /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0042493 // response to drug /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0006979 // response to oxidative stress /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0009792 // embryonic development ending in birth or egg hatching" 8.906 3.787 n y n ruditapes_c5507 -2.751 0.154 6.93 2.519 n y n ruditapes_c10301 -2.865 0.154 6.528 2.279 n y n ruditapes_c27199 -4.871 0.154 3.894 0.799 n y n ruditapes_c7935 -4.936 0.154 3.865 0.783 n y n ruditapes_c9784 -44.475 0.154 2.173 0.049 n y n ruditapes_lrc38232 -1.508 0.155 arginine kinase /// 0005524 // ATP binding /// 0004054 // arginine kinase activity 30.646 20.325 n y n ruditapes_c8016 1.714 0.155 10.533 18.055 n y n ruditapes_c19513 -1.587 0.155 24.842 15.656 n y n ruditapes_c7887 -1.788 0.155 16.582 9.276 n y n ruditapes_lrc16018 -1.985 0.155 12.581 6.339 n y n ruditapes2_c66 5.621 0.155 0.623 3.5 n y n ruditapes_c4266 -2.675 0.155 kl-2 1-beta dynein heavy chain 7.154 2.675 n y n ruditapes_c18452 -2.84 0.155 6.59 2.321 n y n ruditapes_c23242 -2.859 0.155 6.512 2.278 n y n ruditapes_c4236 -3.113 0.155 5.868 1.885 n y n ruditapes_c22557 -5.816 0.155 3.468 0.596 n y n ruditapes_lrc32234 -7.005 0.155 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 3.15 0.45 n y n ruditapes_lrc13545 -1.47 0.156 34.249 23.293 n n n ruditapes_c18314 -1.616 0.156 23.08 14.28 n y n ruditapes2_lrc4390 -1.628 0.156 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0005880 // nuclear microtubule /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006228 // UTP biosynthetic process 22.411 13.77 n y n ruditapes_c14089 2.664 0.156 2.631 7.008 n y n ruditapes_c15082 -1.933 0.156 13.367 6.914 n y n ruditapes_c9111 -2.299 0.156 9.174 3.99 n y n ruditapes_c25070 -2.52 0.156 7.817 3.102 n y n ruditapes2_c2708 -2.712 0.156 6.986 2.576 n y n ruditapes2_c2956 -3.044 0.156 5.992 1.968 n y n ruditapes_c13654 -3.122 0.156 5.808 1.861 n y n ruditapes_c11384 -3.212 0.156 5.618 1.749 n y n ruditapes_c18651 -3.291 0.156 5.458 1.658 n y n ruditapes_c7677 -4.217 0.156 hypothetical protein BRAFLDRAFT_260539 [Branchiostoma floridae] 4.305 1.021 n y n ruditapes_c21444 -4.448 0.156 4.13 0.929 n y n ruditapes_c30211 -5.189 0.156 3.703 0.714 n y n ruditapes_c22629 -22.238 0.156 2.31 0.104 n y n ruditapes_c22146 -55.594 0.156 2.131 0.038 n y n ruditapes_lrc33538 -? 0.156 2.011 0 n y n ruditapes2_c874 -1.19 0.157 155.976 131.021 n n n ruditapes_c4083 1.455 0.157 22.908 33.342 n n n ruditapes_lrc37999 1.48 0.157 beta actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 20.806 30.8 n n n ruditapes2_c835 -1.488 0.157 mitochondrial malate dehydrogenase precursor /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0005488 // binding /// 0006096 // glycolysis 32.151 21.6 n n n ruditapes_c16977 -1.613 0.157 23.067 14.3 n y n ruditapes_c16098 -1.717 0.157 18.626 10.847 n y n ruditapes2_c1707 -1.782 0.157 16.578 9.305 n y n ruditapes_c19541 2.287 0.157 3.927 8.98 n y n ruditapes_c20795 -2.044 0.157 11.646 5.697 n y n ruditapes_c9975 -2.067 0.157 11.351 5.491 n y n ruditapes2_c2198 -2.094 0.157 11.035 5.269 n y n ruditapes_lrc36537 3.388 0.157 1.53 5.183 n y n ruditapes2_c4557 -2.271 0.157 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 9.361 4.121 n y n ruditapes2_c3674 -2.297 0.157 9.152 3.985 n y n ruditapes_c15619 36.874 0.157 0.059 2.172 n y n ruditapes_c5583 -3.006 0.157 6.047 2.011 n y n ruditapes_lrc16610 -3.297 0.157 5.425 1.645 n y n ruditapes_s39921 -3.849 0.157 4.639 1.205 n y n ruditapes_c472 -3.961 0.157 4.526 1.143 n y n ruditapes_c546 -4.818 0.157 dynein heavy chain 3.87 0.803 n y n ruditapes_c15755 -? 0.157 2.007 0 n y n ruditapes2_c1068 1.334 0.158 39.709 52.979 n n n ruditapes_c27847 1.81 0.158 8.341 15.096 n y n ruditapes_c19960 -1.654 0.158 21.028 12.717 n y n ruditapes_c17323 -1.8 0.158 16.027 8.906 n y n ruditapes2_c5240 2.456 0.158 eukaryotic translation elongation factor 1 beta 2 /// 0006412 // translation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 3.21 7.883 n y n ruditapes_c20146 -1.894 0.158 13.969 7.374 n y n ruditapes_c23231 -2.016 0.158 11.936 5.922 n y n ruditapes_c11065 -2.074 0.158 11.188 5.394 n y n ruditapes2_c2393 -2.251 0.158 mgc83220 protein 9.453 4.199 n y n ruditapes2_c554 -2.308 0.158 9.019 3.907 n y n ruditapes2_c2738 -2.642 0.158 7.186 2.72 n y n ruditapes_c3453 -2.804 0.158 6.594 2.352 n y n ruditapes_lrc14979 -2.819 0.158 6.548 2.323 n y n ruditapes_c11738 -2.941 0.158 6.19 2.105 n y n ruditapes_c29880 -5.524 0.158 3.532 0.639 n y n ruditapes_lrc35588 -8.277 0.158 2.894 0.35 n y n ruditapes_c4187 -12.008 0.158 2.576 0.214 n y n ruditapes_c11108 -26.685 0.158 2.239 0.084 n y n ruditapes_c11881 1.532 0.159 17.151 26.282 n y n ruditapes2_lrc4756 1.549 0.159 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.305 25.249 n y n ruditapes_c13535 -1.56 0.159 26.024 16.677 n y n ruditapes2_c3324 1.953 0.159 6.346 12.392 n y n ruditapes_c10755 -1.725 0.159 18.205 10.555 n y n ruditapes_c3100 -1.749 0.159 17.368 9.929 n y n ruditapes_c4179 -1.803 0.159 15.857 8.793 n y n ruditapes_c8804 -1.811 0.159 taurine transporter /// 0006836 // neurotransmitter transport /// 0005328 // neurotransmitter:sodium symporter activity /// 0005887 // integral to plasma membrane 15.709 8.672 n y n ruditapes_c28847 2.743 0.159 2.412 6.616 n y n ruditapes_c19489 -2.043 0.159 11.514 5.634 n y n ruditapes_c10786 3.223 0.159 1.684 5.426 n y n ruditapes_lrc18776 -2.078 0.159 11.106 5.345 n y n ruditapes_c20358 -2.418 0.159 8.276 3.423 n y n ruditapes_c11283 -2.854 0.159 6.406 2.245 n y n ruditapes_c22165 -2.975 0.159 elegans protein confirmed by transcript evidence 6.068 2.04 n y n ruditapes_lrc29900 -4.448 0.159 4.069 0.915 n y n ruditapes_c24704 -7.783 0.159 2.961 0.38 n y n ruditapes_c23113 -1.588 0.16 24.128 15.19 n y n ruditapes_c2985 -1.761 0.16 16.926 9.612 n y n ruditapes_c13914 -1.949 0.16 12.834 6.586 n y n ruditapes2_c2569 2.998 0.16 1.957 5.866 n y n ruditapes_c31503 -2.16 0.16 10.193 4.72 n y n ruditapes_c19571 -2.391 0.16 8.373 3.502 n y n ruditapes2_lrc5224 12.591 0.16 cytochrome c oxidase subunit via polypeptide 1 /// 0006091 // generation of precursor metabolites and energy /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane 0.2 2.515 n y n ruditapes_c14195 -3.306 0.16 5.34 1.615 n y n ruditapes2_lrc5275 -9.299 0.16 ribosomal protein l21 /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.756 0.296 n y n ruditapes_c24302 -48.923 0.16 2.104 0.043 n y n ruditapes_lrc15262 -1.329 0.161 58.973 44.375 n n n ruditapes_c21995 -1.611 0.161 22.812 14.161 n y n ruditapes_c6095 1.919 0.161 6.66 12.784 n y n ruditapes_c19650 -1.857 0.161 14.497 7.808 n y n ruditapes_c5670 -1.929 0.161 13.092 6.787 n y n ruditapes_c13906 -2.023 0.161 11.681 5.772 n y n ruditapes_c10142 -2.189 0.161 9.859 4.503 n y n ruditapes_c10983 -2.747 0.161 activating signal cointegrator 1 complex subunit 1 /// 0045449 // regulation of transcription /// 0005622 // intracellular 6.702 2.44 n y n ruditapes_c8626 -3.113 0.161 ion channel nompc /// 0005216 // ion channel activity /// 0006811 // ion transport /// 0016020 // membrane /// 0008324 // cation transmembrane transporter activity /// 0016491 // oxidoreductase activity /// 0016787 // hydrolase activity /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound 5.694 1.829 n y n ruditapes_c2936 -3.459 0.161 5.049 1.46 n y n ruditapes_c7703 -4.176 0.161 cytoplasmic membrane protein 4.243 1.016 n y n ruditapes_c24850 -4.565 0.161 3.957 0.867 n y n ruditapes_lrc12194 -16.901 0.161 2.351 0.139 n y n ruditapes_c3768 -1.436 0.162 37.359 26.017 n n n ruditapes_lrc17802 -1.709 0.162 18.433 10.783 n y n ruditapes_c18279 -1.798 0.162 15.772 8.77 n y n ruditapes_c27376 -1.942 0.162 12.828 6.604 n y n ruditapes2_c2899 -2.368 0.162 8.441 3.565 n y n ruditapes_c30775 -2.536 0.162 7.526 2.967 n y n ruditapes_c27042 -2.903 0.162 pol-like protein 6.176 2.128 n y n ruditapes_c13843 -3.74 0.162 cmc1 protein 4.66 1.246 n y n ruditapes_c30570 -5.559 0.162 3.455 0.621 n y n ruditapes_c20122 -1.566 0.163 25.087 16.019 n y n ruditapes_c9706 -1.753 0.163 16.975 9.683 n y n ruditapes2_c1072 -1.839 0.163 14.725 8.005 n y n ruditapes_c30080 -1.868 0.163 14.129 7.564 n y n ruditapes_c5868 -1.881 0.163 13.855 7.367 n y n ruditapes_c24776 -2.274 0.163 histone deacetylase 2 "/// 0016575 // histone deacetylation /// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0042493 // response to drug /// 0005657 // replication fork /// 0004407 // histone deacetylase activity /// 0000118 // histone deacetylase complex /// 0005737 // cytoplasm /// 0008134 // transcription factor binding /// 0000792 // heterochromatin /// 0019899 // enzyme binding" 9.065 3.987 n y n ruditapes_c4306 -2.324 0.163 serine threonine-protein 8.699 3.744 n y n ruditapes_lrc14510 -2.402 0.163 8.196 3.413 n y n ruditapes_c8146 -2.534 0.163 purine-rich binding protein- isoform a 7.508 2.963 n y n ruditapes_c36087 11.992 0.163 elongation factor 1-delta 0.209 2.504 n y n ruditapes_c16960 -3.121 0.163 5.609 1.797 n y n ruditapes_c18620 -3.158 0.163 5.546 1.756 n y n ruditapes_c5759 -3.185 0.163 5.493 1.725 n y n ruditapes_c19151 -3.235 0.163 5.383 1.664 n y n ruditapes_c26968 -4.765 0.163 3.793 0.796 n y n ruditapes_c24276 -5.242 0.163 3.555 0.678 n y n ruditapes_c30884 -5.559 0.163 3.424 0.616 n y n ruditapes2_lrc4336 -1.187 0.164 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 156.759 132.117 n n n ruditapes2_c2388 -1.219 0.164 116.626 95.642 n n n ruditapes_c7209 -1.226 0.164 110.779 90.384 n n n ruditapes2_c5965 1.29 0.164 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 50.1 64.63 n n n ruditapes_c30016 -1.446 0.164 35.67 24.663 n n n ruditapes_c9676 -1.517 0.164 28.638 18.884 n y n ruditapes_c22565 -1.546 0.164 26.336 17.031 n y n ruditapes_c1684 -1.751 0.164 16.926 9.669 n y n ruditapes_c39786 -1.797 0.164 rpl24 protein 15.669 8.721 n y n ruditapes2_c6925 2.533 0.164 2.869 7.268 n y n ruditapes2_c2163 -1.976 0.164 cytochrome b5 domain containing 1 /// 0005506 // iron ion binding 12.2 6.175 n y n ruditapes_c2125 -2.041 0.164 11.308 5.541 n y n ruditapes_c23880 -2.041 0.164 11.288 5.532 n y n ruditapes2_c1747 -2.11 0.164 dihydrofolate reductase 10.481 4.967 n y n ruditapes_c15416 -2.331 0.164 ef-hand calcium binding domain 2 /// 0005509 // calcium ion binding 8.619 3.698 n y n ruditapes_c20159 ? 0.164 0 1.936 n y n ruditapes_c11804 -3.628 0.164 4.755 1.311 n y n ruditapes_c11715 -5.15 0.164 3.583 0.696 n y n ruditapes_c17680 -6.078 0.164 3.249 0.534 n y n ruditapes_lrc9817 -1.401 0.165 41.806 29.83 n n n ruditapes2_c963 -1.471 0.165 32.727 22.25 n n n ruditapes_c22816 -1.623 0.165 21.667 13.348 n y n ruditapes2_c2985 1.897 0.165 tena thi-4 family 6.813 12.922 n y n ruditapes_c25997 -1.655 0.165 20.267 12.245 n y n ruditapes_c17805 -2.076 0.165 10.847 5.226 n y n ruditapes2_c5179 -2.19 0.165 9.681 4.42 n y n ruditapes2_c1697 -2.224 0.165 immature colon carcinoma transcript 1 9.377 4.217 n y n ruditapes_c919 -2.275 0.165 proteasome ( macropain) alpha 3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 8.955 3.936 n y n ruditapes_lrc34152 5.216 0.165 0.672 3.504 n y n ruditapes2_c911 -3.942 0.165 4.373 1.109 n y n ruditapes_c10182 -4.209 0.165 mitochondrial ribosomal protein l46 4.14 0.983 n y n ruditapes_lrc13195 -4.276 0.165 4.071 0.952 n y n ruditapes_lrc38407 -4.686 0.165 3.809 0.813 n y n ruditapes_lrc12833 -4.852 0.165 3.719 0.766 n y n ruditapes_c13128 -1.45 0.166 34.794 23.988 n n n ruditapes_c33227 -1.557 0.166 25.379 16.304 n y n ruditapes_c22771 -1.612 0.166 22.227 13.79 n y n ruditapes2_c1237 -1.885 0.166 rna binding motif protein 8a /// 0008380 // RNA splicing /// 0005634 // nucleus /// 0006397 // mRNA processing /// 0003723 // RNA binding 13.573 7.2 n y n ruditapes_c26644 -2.224 0.166 9.337 4.199 n y n ruditapes_c29761 -2.339 0.166 8.464 3.618 n y n ruditapes_c13320 -2.432 0.166 7.927 3.259 n y n ruditapes_c826 -2.467 0.166 7.708 3.124 n y n ruditapes_c18424 -2.485 0.166 7.638 3.073 n y n ruditapes_c7847 -2.606 0.166 7.084 2.719 n y n ruditapes_lrc23034 -2.661 0.166 6.852 2.575 n y n ruditapes_c5661 -2.74 0.166 6.583 2.402 n y n ruditapes_c5494 -2.982 0.166 5.847 1.961 n y n ruditapes_c1031 -3.367 0.166 5.069 1.505 n y n ruditapes_c28598 -3.41 0.166 5.012 1.47 n y n ruditapes_c4898 -7.907 0.166 2.847 0.36 n y n ruditapes2_lrc5279 -1.389 0.167 ependymin related protein-1 precursor 43.632 31.419 n n n ruditapes2_lrc4787 -1.529 0.167 peptidylprolyl isomerase f (cyclophilin f) /// 0044464 // cell part 27.171 17.767 n y n ruditapes_c3490 -1.642 0.167 20.678 12.596 n y n ruditapes_c29989 -1.969 0.167 12.127 6.158 n y n ruditapes_c13776 -2.414 0.167 sulfotransferase family cytosolic sulfotransferase 3 7.993 3.31 n y n ruditapes_c8385 -2.439 0.167 7.855 3.221 n y n ruditapes_c15363 -2.461 0.167 7.707 3.132 n y n ruditapes_c7349 -2.547 0.167 phosphatase and actin regulator 1 7.3 2.867 n y n ruditapes2_c4610 ? 0.167 0 1.908 n y n ruditapes2_c1841 -3.405 0.167 4.998 1.468 n y n ruditapes_c12857 -3.88 0.167 hypothetical protein BRAFLDRAFT_118007 [Branchiostoma floridae] 4.386 1.13 n y n ruditapes_c13009 -6.195 0.167 3.176 0.513 n y n ruditapes_c23227 -7.907 0.167 2.834 0.358 n y n ruditapes_c17718 -44.475 0.167 hypothetical protein BRAFLDRAFT_226506 [Branchiostoma floridae] 2.045 0.046 n y n ruditapes_c10038 -51.147 0.167 2.028 0.04 n y n ruditapes_c29772 -1.455 0.168 33.904 23.294 n n n ruditapes2_c395 -1.629 0.168 21.139 12.974 n y n ruditapes_c19194 -1.675 0.168 19.142 11.428 n y n ruditapes2_c305 2.095 0.168 4.835 10.13 n y n ruditapes_c15141 -1.726 0.168 17.406 10.087 n y n ruditapes2_c3665 -1.849 0.168 14.201 7.682 n y n ruditapes_c1084 -1.853 0.168 14.103 7.611 n y n ruditapes_c35789 -2.048 0.168 10.98 5.361 n y n ruditapes_c11162 -2.709 0.168 6.621 2.444 n y n ruditapes_c30519 -2.914 0.168 5.973 2.05 n y n ruditapes_c26960 -10.674 0.168 2.543 0.238 n y n ruditapes_c2541 -13.343 0.168 2.389 0.179 n y n ruditapes_c13761 -20.014 0.168 2.217 0.111 n y n ruditapes_c27618 1.15 0.169 163.807 188.411 n n n ruditapes_c30629 -1.492 0.169 29.987 20.093 n n n ruditapes_lrc32860 -1.686 0.169 nucleoside diphosphate kinase /// 0005488 // binding /// 0009117 // nucleotide metabolic process 18.7 11.093 n y n ruditapes2_c724 -2.016 0.169 11.325 5.617 n y n ruditapes_c17257 -2.251 0.169 8.972 3.985 n y n ruditapes_lrc33636 4.252 0.169 developmentally-regulated vdg3 0.931 3.959 n y n ruditapes_c28224 -2.745 0.169 6.46 2.353 n y n ruditapes_lrc26347 -2.98 0.169 5.774 1.938 n y n ruditapes2_c5932 -3.058 0.169 ribosomal protein s3a /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part /// 0043232 // intracellular non-membrane-bounded organelle /// 0006412 // translation 5.604 1.833 n y n ruditapes_lrc32154 -3.132 0.169 5.44 1.737 n y n ruditapes_c18418 -3.189 0.169 5.319 1.668 n y n ruditapes_lrc32870 -3.685 0.169 nadh dehydrogenase 1 beta 8kda 4.558 1.237 n y n ruditapes_c20821 -5.189 0.169 3.48 0.671 n y n ruditapes_lrc34734 -18.902 0.169 2.225 0.118 n y n ruditapes_c33273 -? 0.169 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0008152 // metabolic process 1.894 0 n y n ruditapes_c9195 -1.743 0.17 16.739 9.606 n y n ruditapes_c21248 2.229 0.17 3.973 8.856 n y n ruditapes_c17017 -1.988 0.17 11.693 5.882 n y n ruditapes_c7151 -2.002 0.17 prostate stem cell antigen precursor-like 11.485 5.736 n y n ruditapes_c15656 -2.08 0.17 10.518 5.056 n y n ruditapes2_c3712 -2.083 0.17 10.5 5.042 n y n ruditapes2_c161 3.514 0.17 glutathione peroxidase /// 0044444 // cytoplasmic part /// 0004601 // peroxidase activity /// 0043231 // intracellular membrane-bounded organelle /// 0045454 // cell redox homeostasis /// 0016787 // hydrolase activity /// 0016042 // lipid catabolic process 1.334 4.689 n y n ruditapes_c25345 -2.259 0.17 8.893 3.937 n y n ruditapes_c14673 -2.399 0.17 7.941 3.31 n y n ruditapes_c14056 -2.515 0.17 7.331 2.915 n y n ruditapes_c24735 -2.609 0.17 mgc83645 protein 6.93 2.656 n y n ruditapes2_lrc6003 -3.394 0.17 ubiquinol-cytochrome c reductase binding protein /// 0005739 // mitochondrion 4.954 1.46 n y n ruditapes_c29087 -3.583 0.17 4.673 1.304 n y n ruditapes_c33845 -3.622 0.17 4.622 1.276 n y n ruditapes_c9220 -6.671 0.17 3.009 0.451 n y n ruditapes_c5838 -17.79 0.17 ensangp00000014082-like protein /// 0034614 // cellular response to reactive oxygen species /// 0005739 // mitochondrion /// 0008284 // positive regulation of cell proliferation /// 0016020 // membrane /// 0001302 // replicative cell aging /// 0010670 // positive regulation of oxygen and reactive oxygen species metabolic process 2.234 0.126 n y n ruditapes_c631 -1.408 0.171 hypothetical protein [Leishmania major] 39.638 28.147 n n n ruditapes2_lrc4324 -1.54 0.171 actin /// 0005488 // binding 25.932 16.835 n y n ruditapes_c20547 -1.547 0.171 25.449 16.451 n y n ruditapes_s32375 -1.666 0.171 19.271 11.564 n y n ruditapes_lrc31906 -1.894 0.171 13.12 6.926 n y n ruditapes_c19778 5.284 0.171 solute carrier organic anion transporter member isoform cra_e 0.638 3.37 n y n ruditapes_c10067 -3.014 0.171 fibropellin ib 5.643 1.872 n y n ruditapes_lrc7095 -3.239 0.171 5.191 1.603 n y n ruditapes_c8885 -3.647 0.171 4.571 1.253 n y n ruditapes_c31070 -5.189 0.171 3.442 0.663 n y n ruditapes_c18897 -6.375 0.171 3.065 0.481 n y n ruditapes2_c4329 1.593 0.172 beta 2c /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 13.371 21.296 n y n ruditapes_lrc38939 -1.584 0.172 ribosomal protein l12 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 23.109 14.593 n y n ruditapes_c10740 -1.64 0.172 20.309 12.387 n y n ruditapes_c16972 -1.958 0.172 11.994 6.126 n y n ruditapes_lrc25376 -1.978 0.172 lethal neo18 11.717 5.925 n y n ruditapes_c19012 -2.05 0.172 10.768 5.252 n y n ruditapes_c21218 3.341 0.172 1.462 4.883 n y n ruditapes_c24836 -2.147 0.172 9.727 4.53 n y n ruditapes_c8375 -2.17 0.172 9.529 4.391 n y n ruditapes_c25463 -2.303 0.172 8.471 3.679 n y n ruditapes_c26818 -2.361 0.172 8.094 3.428 n y n ruditapes_c11954 -2.379 0.172 rhabdoid tumor deletion region protein 1 7.992 3.359 n y n ruditapes2_c2000 -3.558 0.172 cytochrome p450 "/// 0007275 // multicellular organismal development /// 0016712 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen /// 0042221 // response to chemical stimulus /// 0065007 // biological regulation /// 0044249 // cellular biosynthetic process /// 0046483 // heterocycle metabolic process /// 0044464 // cell part /// 0006725 // cellular aromatic compound metabolic process" 4.669 1.312 n y n ruditapes2_c1852 -3.706 0.172 4.478 1.208 n y n ruditapes_c12982 -10.007 0.172 2.538 0.254 n y n ruditapes2_lrc4456 -1.305 0.173 ribosomal protein s16 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 63.062 48.308 n n n ruditapes_c1109 -1.487 0.173 29.925 20.12 n n n ruditapes_lrc32602 1.659 0.173 40s ribosomal protein s10 /// 0005840 // ribosome 11.078 18.383 n y n ruditapes_c9276 -1.721 0.173 17.086 9.927 n y n ruditapes2_c5137 -1.77 0.173 alkaline ceramidase 15.658 8.844 n y n ruditapes_c21138 -1.844 0.173 13.924 7.549 n y n ruditapes_c24972 -1.966 0.173 bardet-biedl syndrome 7 /// 0032501 // multicellular organismal process /// 0045444 // fat cell differentiation /// 0005515 // protein binding /// 0034464 // BBSome /// 0044464 // cell part 11.821 6.013 n y n ruditapes_lrc19812 2.876 0.173 2.027 5.829 n y n ruditapes_c5341 -2.097 0.173 10.202 4.864 n y n ruditapes2_c1779 -2.547 0.173 polymerase ii (dna directed) polypeptide g "/// 0003899 // DNA-directed RNA polymerase activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0006915 // apoptosis /// 0003723 // RNA binding /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0000398 // nuclear mRNA splicing, via spliceosome" 7.115 2.794 n y n ruditapes_c6319 -2.564 0.173 7.013 2.735 n y n ruditapes_c17753 -2.669 0.173 6.612 2.478 n y n ruditapes2_c3034 -2.707 0.173 glutathione s-transferase mu /// 0016740 // transferase activity 6.477 2.392 n y n ruditapes_c10788 -2.849 0.173 6.013 2.11 n y n ruditapes_c20692 -2.935 0.173 orf2-encoded protein 5.779 1.969 n y n ruditapes_c1818 -3.351 0.173 ef-hand calcium binding domain 10 4.934 1.472 n y n ruditapes_c38619 -11.119 0.173 2.453 0.221 n y n ruditapes_c18273 -13.787 0.173 2.317 0.168 n y n ruditapes_c7458 -14.296 0.173 2.304 0.161 n y n ruditapes_c31775 1.364 0.174 31.631 43.138 n n n ruditapes2_c3151 -1.47 0.174 31.39 21.348 n n n ruditapes_c1364 -1.504 0.174 28.371 18.865 n y n ruditapes_c26805 -1.542 0.174 25.388 16.46 n y n ruditapes2_lrc3825 -1.577 0.174 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 23.201 14.714 n y n ruditapes_c16795 -1.616 0.174 21.128 13.075 n y n ruditapes2_c3249 -1.888 0.174 13.047 6.911 n y n ruditapes_c22806 -1.924 0.174 12.388 6.438 n y n ruditapes2_c1791 -1.978 0.174 11.616 5.874 n y n ruditapes_c8840 -2.153 0.174 9.588 4.453 n y n ruditapes_c16571 3.941 0.174 1.046 4.125 n y n ruditapes_c27974 6.745 0.174 0.432 2.913 n y n ruditapes2_c4085 -3.407 0.174 4.838 1.42 n y n ruditapes2_lrc5510 -4.178 0.174 predicted protein [Nematostella vectensis] 3.989 0.955 n y n ruditapes_c5133 -6.424 0.174 3.008 0.468 n y n ruditapes_lrc14757 -6.671 0.174 2.958 0.443 n y n ruditapes_c7247 -6.671 0.174 kazal-type proteinase inhibitor /// 0005576 // extracellular region /// 0032501 // multicellular organismal process /// 0016043 // cellular component organization /// 0007154 // cell communication 2.956 0.443 n y n ruditapes_c25089 -10.563 0.174 2.478 0.235 n y n ruditapes_c16019 -13.343 0.174 2.324 0.174 n y n ruditapes_c20744 -31.133 0.174 2.034 0.065 n y n ruditapes_c16107 -1.629 0.175 20.441 12.55 n y n ruditapes_c18594 -1.689 0.175 18.081 10.706 n y n ruditapes_c4622 2.04 0.175 ornithine decarboxylase antizyme /// 0005856 // cytoskeleton /// 0006595 // polyamine metabolic process /// 0005515 // protein binding /// 0008073 // ornithine decarboxylase inhibitor activity 5.08 10.365 n y n ruditapes2_c2201 -1.787 0.175 15.112 8.459 n y n ruditapes_c16342 -1.843 0.175 13.864 7.524 n y n ruditapes_c9008 -2.049 0.175 10.646 5.195 n y n ruditapes_c10460 -2.337 0.175 8.145 3.485 n y n ruditapes_c30344 -3.254 0.175 ubiquitin-activating enzyme e1 /// 0005634 // nucleus /// 0005515 // protein binding /// 0005737 // cytoplasm 5.068 1.557 n y n ruditapes_c3755 -3.806 0.175 4.299 1.129 n y n ruditapes_c14454 -? 0.175 1.842 0 n y n ruditapes_c4674 -1.511 0.176 27.438 18.157 n y n ruditapes_c31407 2.57 0.176 2.619 6.73 n y n ruditapes_lrc32573 -1.951 0.176 11.91 6.106 n y n ruditapes_c3015 -2.463 0.176 7.384 2.998 n y n ruditapes_c25436 -2.52 0.176 7.112 2.822 n y n ruditapes_c15151 -2.557 0.176 6.967 2.724 n y n ruditapes2_c303 -2.642 0.176 6.63 2.51 n y n ruditapes_c29587 -2.683 0.176 6.463 2.409 n y n ruditapes_c576 -2.895 0.176 5.803 2.004 n y n ruditapes_c17491 -3.011 0.176 5.515 1.831 n y n ruditapes_c4354 -3.228 0.176 5.076 1.572 n y n ruditapes_s39305 -3.3 0.176 alkaline phosphatase 4.955 1.502 n y n ruditapes2_lrc4648 -3.505 0.176 cystatin c 4.656 1.328 n y n ruditapes_c7696 -3.619 0.176 4.496 1.242 n y n ruditapes2_c2091 -3.812 0.176 4.288 1.125 n y n ruditapes_c20434 -4.892 0.176 3.501 0.716 n y n ruditapes_c18557 -6.036 0.176 3.075 0.509 n y n ruditapes_lrc26298 -11.119 0.176 2.417 0.217 n y n ruditapes_c14469 -? 0.176 1.834 0 n y n ruditapes2_c1558 -1.62 0.177 20.719 12.789 n y n ruditapes_c15535 -1.715 0.177 17.002 9.915 n y n ruditapes_c1973 -1.785 0.177 15.055 8.433 n y n ruditapes_c28550 -1.901 0.177 12.605 6.63 n y n ruditapes_c27758 -2.14 0.177 9.572 4.473 n y n ruditapes_c18192 26.082 0.177 0.078 2.046 n y n ruditapes_c27478 ? 0.177 0 1.824 n y n ruditapes_lrc34419 -3.317 0.177 4.902 1.478 n y n ruditapes_c30745 -3.336 0.177 4.881 1.463 n y n ruditapes_c24731 -5.474 0.177 3.238 0.592 n y n ruditapes_c29163 -5.93 0.177 3.099 0.523 n y n ruditapes_c16555 -10.674 0.177 2.429 0.228 n y n ruditapes2_c325 1.554 0.178 14.63 22.735 n y n ruditapes2_c4176 -1.564 0.178 23.509 15.03 n y n ruditapes_c16469 -1.617 0.178 20.759 12.835 n y n ruditapes_c18037 -1.629 0.178 20.134 12.359 n y n ruditapes_c24372 -1.678 0.178 18.2 10.848 n y n ruditapes_c7787 -2.047 0.178 10.512 5.136 n y n ruditapes2_c2383 -2.279 0.178 8.408 3.689 n y n ruditapes_c9242 -2.351 0.178 7.957 3.385 n y n ruditapes_c25620 -2.351 0.178 7.949 3.382 n y n ruditapes_c27757 -2.499 0.178 7.163 2.866 n y n ruditapes_c2040 -2.514 0.178 7.072 2.813 n y n ruditapes_c13917 -2.564 0.178 6.875 2.682 n y n ruditapes_c21757 -3.254 0.178 zinc finger protein 180 4.991 1.534 n y n ruditapes_c3345 -3.447 0.178 4.693 1.362 n y n ruditapes_c28186 -6.004 0.178 3.064 0.51 n y n ruditapes_c12895 -6.195 0.178 3.003 0.485 n y n ruditapes_lrc8625 -15.01 0.178 2.222 0.148 n y n ruditapes_c15198 -16.308 0.178 ribosome production factor 1 2.191 0.134 n y n ruditapes_c26367 -17.049 0.178 2.167 0.127 n y n ruditapes2_c3156 -1.313 0.179 58.689 44.695 n n n ruditapes2_lrc3949 1.813 0.179 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 7.517 13.629 n y n ruditapes_c15586 -1.741 0.179 16.05 9.218 n y n ruditapes_c19567 -1.943 0.179 phosphoenolpyruvate carboxykinase 2 /// 0005739 // mitochondrion /// 0030145 // manganese ion binding /// 0005525 // GTP binding /// 0006094 // gluconeogenesis /// 0016301 // kinase activity /// 0004613 // phosphoenolpyruvate carboxykinase (GTP) activity 11.815 6.08 n y n ruditapes_c22560 -2.062 0.179 10.281 4.986 n y n ruditapes_c15553 -2.144 0.179 ebna1 binding protein 2 /// 0007059 // chromosome segregation /// 0005624 // membrane fraction /// 0005730 // nucleolus /// 0005515 // protein binding /// 0006364 // rRNA processing 9.471 4.417 n y n ruditapes_c18362 -2.345 0.179 7.932 3.383 n y n ruditapes_c21354 -2.419 0.179 7.518 3.108 n y n ruditapes2_c2465 -2.455 0.179 elongation factor tu mitochondrial 7.338 2.988 n y n ruditapes_c28931 -2.566 0.179 6.835 2.664 n y n ruditapes_c29790 ? 0.179 0 1.808 n y n ruditapes_c4244 -3.046 0.179 5.369 1.763 n y n ruditapes_c16884 -3.227 0.179 5.005 1.551 n y n ruditapes_c19619 -3.453 0.179 4.665 1.351 n y n ruditapes2_c1196 -4.342 0.179 3.771 0.868 n y n ruditapes_c19620 -4.65 0.179 3.578 0.77 n y n ruditapes_c15987 -11.86 0.179 2.338 0.197 n y n ruditapes2_lrc6021 -30.021 0.179 cell death-regulatory protein grim19 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 2.003 0.067 n y n ruditapes2_lrc4954 -1.258 0.18 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 81.495 64.781 n n n ruditapes_c15034 -1.491 0.18 kazal-type serine proteinase inhibitor 1 28.571 19.162 n n n ruditapes_c21452 -1.609 0.18 20.912 12.997 n y n ruditapes_c23376 -1.611 0.18 20.815 12.918 n y n ruditapes_c14671 -1.997 0.18 11.029 5.523 n y n ruditapes_c10039 -1.998 0.18 10.991 5.501 n y n ruditapes_lrc33881 -2.159 0.18 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 9.28 4.299 n y n ruditapes_c23150 -2.29 0.18 8.269 3.611 n y n ruditapes_c9881 -2.357 0.18 7.847 3.33 n y n ruditapes2_c1865 -2.449 0.18 7.317 2.988 n y n ruditapes_c5653 -2.523 0.18 6.962 2.759 n y n ruditapes_c9814 -2.53 0.18 flagellar outer dynein arm light chain 2 6.941 2.743 n y n ruditapes_c10437 -2.616 0.18 thioredoxin family trp26 6.598 2.522 n y n ruditapes_c33644 -3.018 0.18 sarcoplasmic calcium-binding protein 5.397 1.788 n y n ruditapes_c18262 -3.069 0.18 5.303 1.728 n y n ruditapes2_c626 -3.73 0.18 rna polymerase ii transcriptional 4.279 1.147 n y n ruditapes_c27273 -9.213 0.18 2.511 0.273 n y n ruditapes2_c471 -1.549 0.181 24.134 15.581 n y n ruditapes_c10490 -1.59 0.181 21.717 13.654 n y n ruditapes_c2438 -1.882 0.181 12.763 6.783 n y n ruditapes_c16869 -1.9 0.181 chromosome 10 open reading frame 63 12.444 6.55 n y n ruditapes_c10704 -2.043 0.181 10.421 5.1 n y n ruditapes_c27372 -2.063 0.181 10.181 4.934 n y n ruditapes_c26141 -2.376 0.181 7.684 3.234 n y n ruditapes_c30804 -2.529 0.181 6.906 2.731 n y n ruditapes_lrc33033 -2.555 0.181 ribosomal protein s3 /// 0005737 // cytoplasm 6.799 2.662 n y n ruditapes_c26577 -2.581 0.181 6.701 2.596 n y n ruditapes_c16761 -2.731 0.181 6.164 2.257 n y n ruditapes2_c5212 15.065 0.181 complement component q subcomponent-like 3 /// 0005488 // binding 0.145 2.188 n y n ruditapes_c20179 -2.789 0.181 5.964 2.139 n y n ruditapes_lrc8123 -3.304 0.181 4.829 1.462 n y n ruditapes_c23694 -3.507 0.181 4.531 1.292 n y n ruditapes_c4659 -4.544 0.181 3.619 0.796 n y n ruditapes_c16943 -6.036 0.181 3.017 0.5 n y n ruditapes_c17403 -1.523 0.182 25.811 16.953 n y n ruditapes2_c2227 -1.635 0.182 19.531 11.946 n y n ruditapes_c16731 -2.022 0.182 10.628 5.257 n y n ruditapes2_c1954 -2.398 0.182 af154046_1naegleriapore a pore-forming peptide precursor 7.533 3.141 n y n ruditapes_c23166 -2.499 0.182 7.027 2.812 n y n ruditapes_c1108 -2.581 0.182 6.665 2.582 n y n ruditapes_c21197 -2.908 0.182 5.62 1.933 n y n ruditapes_c5103 -4.02 0.182 3.961 0.985 n y n ruditapes_c29291 -4.726 0.182 3.493 0.739 n y n ruditapes_c30936 -1.28 0.183 69.8 54.526 n n n ruditapes2_c49 -1.427 0.183 chorion b-zip transcription factor /// 0003677 // DNA binding 35.016 24.538 n n n ruditapes_c11704 -1.648 0.183 18.939 11.489 n y n ruditapes_c4647 -1.748 0.183 gelsolin 15.556 8.9 n y n ruditapes_c14997 -1.841 0.183 13.395 7.277 n y n ruditapes2_c2798 -1.92 0.183 12.005 6.253 n y n ruditapes_c25835 -2.018 0.183 10.606 5.255 n y n ruditapes_lrc28969 4.882 0.183 0.687 3.352 n y n ruditapes_c5229 -2.601 0.183 6.55 2.519 n y n ruditapes2_c582 -2.707 0.183 6.171 2.28 n y n ruditapes2_c1935 -3.068 0.183 calmodulin 5.219 1.701 n y n ruditapes2_c2938 -4.803 0.183 3.434 0.715 n y n ruditapes_c13692 -4.942 0.183 3.364 0.681 n y n ruditapes_c1248 -7.718 0.183 2.653 0.344 n y n ruditapes_lrc34735 -1.267 0.184 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 75.184 59.318 n n n ruditapes_lrc25471 -1.319 0.184 55.76 42.282 n n n ruditapes_c18366 -1.35 0.184 47.844 35.453 n n n ruditapes_c5546 -2.012 0.184 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 10.637 5.287 n y n ruditapes_c31107 -2.132 0.184 9.335 4.38 n y n ruditapes_c14132 -2.165 0.184 9.057 4.183 n y n ruditapes_c23867 -2.277 0.184 8.204 3.604 n y n ruditapes_c25487 -2.348 0.184 7.725 3.289 n y n ruditapes_c14337 -2.37 0.184 7.614 3.212 n y n ruditapes_c23990 -2.497 0.184 6.964 2.788 n y n ruditapes_c18343 -2.528 0.184 6.816 2.696 n y n ruditapes_c28504 ? 0.184 0 1.764 n y n ruditapes_c3206 -3.663 0.184 4.278 1.168 n y n ruditapes_c25133 -4.036 0.184 3.923 0.972 n y n ruditapes_c17239 -5.634 0.184 3.094 0.549 n y n ruditapes_c30462 -7.783 0.184 2.632 0.338 n y n ruditapes_c9255 -? 0.184 par-6 gamma /// 0007409 // axonogenesis /// 0030334 // regulation of cell migration /// 0005634 // nucleus /// 0007163 // establishment or maintenance of cell polarity /// 0005515 // protein binding /// 0045177 // apical part of cell /// 0007043 // cell-cell junction assembly /// 0005938 // cell cortex /// 0005923 // tight junction 1.767 0 n y n ruditapes2_c658 -1.388 0.185 40.192 28.952 n n n ruditapes_c31722 -1.513 0.185 26.236 17.339 n y n ruditapes_lrc33240 -1.625 0.185 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 19.752 12.156 n y n ruditapes2_c1607 -1.769 0.185 PREDICTED: similar to OSJNBa0011F23.1 [Strongylocentrotus purpuratus] 14.847 8.391 n y n ruditapes_c10329 -1.849 0.185 13.118 7.095 n y n ruditapes_c9409 3.571 0.185 1.203 4.296 n y n ruditapes_c17597 -2.243 0.185 8.385 3.738 n y n ruditapes_lrc15175 -2.254 0.185 8.337 3.699 n y n ruditapes_c10546 -3.202 0.185 4.931 1.54 n y n ruditapes2_c689 -3.309 0.185 trove domain member 2 4.741 1.432 n y n ruditapes2_lrc4297 -3.605 0.185 4.342 1.204 n y n ruditapes_c19779 -4.036 0.185 3.899 0.966 n y n ruditapes_lrc11286 -4.276 0.185 3.716 0.869 n y n ruditapes_lrc37479 -6.671 0.185 2.802 0.42 n y n ruditapes_lrc22694 -8.895 0.185 novel protein vertebrate chondroitin sulfate proteoglycan family 2.489 0.28 n y n ruditapes_lrc16682 -? 0.185 1.753 0 n y n ruditapes2_c477 1.485 0.186 nucleolar protein 5a /// 0042254 // ribosome biogenesis /// 0005634 // nucleus 17.841 26.5 n n n ruditapes2_c1006 -1.422 0.186 35.207 24.761 n n n ruditapes_c12931 -1.505 0.186 26.798 17.811 n y n ruditapes_c24608 -1.621 0.186 19.769 12.193 n y n ruditapes_c29765 -1.638 0.186 19.049 11.63 n y n ruditapes2_c2226 -1.816 0.186 eukaryotic translation initiation factor subunit e /// 0005515 // protein binding /// 0005829 // cytosol 13.741 7.566 n y n ruditapes2_c153 -2.36 0.186 7.616 3.227 n y n ruditapes_c910 -2.452 0.186 7.118 2.903 n y n ruditapes_lrc12303 -2.493 0.186 6.923 2.777 n y n ruditapes_c17513 -3.009 0.186 5.282 1.756 n y n ruditapes_c17242 -3.624 0.186 4.294 1.185 n y n ruditapes_c21230 -7.561 0.186 2.634 0.348 n y n ruditapes_lrc38534 -7.869 0.186 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.598 0.33 n y n ruditapes_lrc7702 -8.895 0.186 2.479 0.279 n y n ruditapes2_c854 -? 0.186 1.75 0 n y n ruditapes2_c644 -1.378 0.187 41.649 30.231 n n n ruditapes_c18214 -1.96 0.187 11.172 5.699 n y n ruditapes2_c3091 -3.141 0.187 4.987 1.588 n y n ruditapes_c10816 -3.588 0.187 4.308 1.201 n y n ruditapes2_c2701 1.341 0.188 33.455 44.857 n n n ruditapes_c10444 -1.479 0.188 28.647 19.375 n n n ruditapes_c27205 -1.48 0.188 28.519 19.271 n n n ruditapes_c8397 -1.5 0.188 26.892 17.929 n y n ruditapes2_c5665 -1.502 0.188 26.702 17.772 n y n ruditapes_c1601 -1.649 0.188 18.438 11.181 n y n ruditapes_c13990 -1.748 0.188 15.224 8.71 n y n ruditapes_c12198 -1.75 0.188 15.151 8.658 n y n ruditapes_c19819 -1.998 0.188 serine protease inhibitor 2 10.627 5.319 n y n ruditapes_lrc34709 3.519 0.188 1.222 4.299 n y n ruditapes_c22105 -2.183 0.188 8.757 4.011 n y n ruditapes_c19218 4.497 0.188 0.775 3.484 n y n ruditapes_lrc37559 -2.499 0.188 ribosomal protein l8 6.848 2.741 n y n ruditapes_c25871 -3.002 0.188 5.238 1.745 n y n ruditapes_lrc37075 ? 0.188 mannose c type 2 0 1.736 n y n ruditapes_c26412 -3.219 0.188 4.816 1.496 n y n ruditapes2_c721 -3.354 0.188 4.612 1.375 n y n ruditapes_c22337 -4.114 0.188 3.794 0.922 n y n ruditapes_c12816 -5.363 0.188 3.12 0.582 n y n ruditapes_c16334 -5.671 0.188 3.023 0.533 n y n ruditapes_c7735 -9.848 0.188 2.373 0.241 n y n ruditapes2_c1393 -1.279 0.189 68.534 53.6 n n n ruditapes2_lrc3152 -1.418 0.189 35.189 24.808 n n n ruditapes2_c1588 -1.502 0.189 spna2 protein /// 0051016 // barbed-end actin filament capping /// 0005200 // structural constituent of cytoskeleton /// 0005516 // calmodulin binding /// 0008091 // spectrin /// 0005624 // membrane fraction /// 0003779 // actin binding /// 0030018 // Z disc /// 0045162 // clustering of voltage-gated sodium channels /// 0005829 // cytosol /// 0005916 // fascia adherens /// 0005509 // calcium ion binding /// 0033270 // paranode region of axon 26.668 17.76 n y n ruditapes_c22975 -1.579 0.189 21.592 13.671 n y n ruditapes_c10934 -1.629 0.189 19.226 11.802 n y n ruditapes_c6614 -1.689 0.189 16.964 10.046 n y n ruditapes2_c2857 -1.807 0.189 13.747 7.608 n y n ruditapes_c124 -1.83 0.189 rna polymerase ii protein ral transcription factor /// 0005515 // protein binding /// 0009987 // cellular process /// 0044424 // intracellular part 13.274 7.253 n y n ruditapes_c11228 -2.235 0.189 8.301 3.715 n y n ruditapes_c20342 -2.594 0.189 6.417 2.473 n y n ruditapes_c30647 -2.62 0.189 6.306 2.407 n y n ruditapes2_c3432 -2.941 0.189 nadh dehydrogenase flavoprotein 2 /// 0044464 // cell part 5.376 1.828 n y n ruditapes_c30066 -3.678 0.189 4.175 1.135 n y n ruditapes_c24141 -4.118 0.189 3.767 0.915 n y n ruditapes_c26424 -4.151 0.189 3.742 0.901 n y n ruditapes2_c2732 -5.142 0.189 3.196 0.621 n y n ruditapes2_c638 -1.268 0.19 73.078 57.649 n n n ruditapes_c3713 -1.367 0.19 42.894 31.367 n n n ruditapes_c12555 -1.409 0.19 transmembrane protein 38a /// 0016020 // membrane 36.22 25.709 n n n ruditapes_c20516 -1.551 0.19 23.032 14.852 n y n ruditapes2_c2254 -1.619 0.19 19.523 12.06 n y n ruditapes2_c2512 -1.783 0.19 14.228 7.978 n y n ruditapes_c23774 -2.124 0.19 9.193 4.329 n y n ruditapes2_c1258 -2.192 0.19 cg12012 cg12012-pa 8.583 3.916 n y n ruditapes_c10409 -2.203 0.19 8.504 3.861 n y n ruditapes_c27401 -2.311 0.19 7.764 3.36 n y n ruditapes_c24030 -2.374 0.19 7.39 3.113 n y n ruditapes_c6101 -2.377 0.19 7.384 3.106 n y n ruditapes_c12523 -2.502 0.19 6.758 2.701 n y n ruditapes_c9050 -2.583 0.19 mitochondrial translational release factor 1-like 6.42 2.485 n y n ruditapes_c19841 -2.874 0.19 5.507 1.916 n y n ruditapes_c27810 -3.113 0.19 4.971 1.597 n y n ruditapes_lrc9568 -4.17 0.19 3.711 0.89 n y n ruditapes2_lrc5171 -4.304 0.19 cg15828 cg15828- partial 3.618 0.841 n y n ruditapes_c15369 -8.895 0.19 2.435 0.274 n y n ruditapes_lrc34827 -57.818 0.19 1.813 0.031 n y n ruditapes2_lrc3391 1.341 0.191 atp synthase beta subunit "/// 0005524 // ATP binding /// 0043499 // eukaryotic cell surface binding /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0001525 // angiogenesis /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0005754 // mitochondrial proton-transporting ATP synthase, catalytic core /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0051453 // regulation of intracellular pH /// 0042288 // MHC class I protein binding /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 32.846 44.061 n n n ruditapes_c17706 -1.356 0.191 45.073 33.251 n n n ruditapes_c3465 -1.513 0.191 25.456 16.825 n y n ruditapes2_c481 2.979 0.191 chaperonin containing subunit 2 /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004672 // protein kinase activity /// 0051082 // unfolded protein binding /// 0006457 // protein folding 1.717 5.116 n y n ruditapes_c31409 3.298 0.191 glutamine synthetase /// 0004356 // glutamate-ammonia ligase activity /// 0006542 // glutamine biosynthetic process 1.382 4.557 n y n ruditapes_c12516 3.943 0.191 0.97 3.825 n y n ruditapes_c14730 -3.005 0.191 5.162 1.718 n y n ruditapes_lrc35444 -3.024 0.191 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 5.14 1.7 n y n ruditapes_c10368 -4.65 0.191 3.393 0.73 n y n ruditapes_c17213 -6.486 0.191 2.773 0.428 n y n ruditapes_c22661 -6.671 0.191 2.731 0.409 n y n ruditapes_c29214 -7.116 0.191 2.651 0.372 n y n ruditapes_c13068 -7.264 0.191 2.625 0.361 n y n ruditapes_c17174 -9.34 0.191 2.383 0.255 n y n ruditapes2_lrc4491 -21.682 0.191 1.965 0.091 n y n ruditapes_c4827 1.71 0.192 8.933 15.272 n y n ruditapes_c30426 -2.107 0.192 9.257 4.394 n y n ruditapes_c31159 3.597 0.192 1.152 4.143 n y n ruditapes_c14045 -2.323 0.192 7.605 3.275 n y n ruditapes2_c1469 -2.376 0.192 7.314 3.078 n y n ruditapes_c22483 -2.456 0.192 6.9 2.809 n y n ruditapes_c544 -2.609 0.192 6.273 2.404 n y n ruditapes_c5559 ? 0.192 mitochondrial ribosomal protein l3-llike protein 0 1.701 n y n ruditapes_c18259 -3.31 0.192 ccr4-not transcription subunit 3 "/// 0006355 // regulation of transcription, DNA-dependent /// 0005634 // nucleus /// 0005515 // protein binding /// 0030528 // transcription regulator activity /// 0005737 // cytoplasm" 4.588 1.386 n y n ruditapes_c7966 -14.454 0.192 2.108 0.146 n y n ruditapes2_c4553 -26.685 0.192 1.91 0.072 n y n ruditapes_lrc16556 -34.468 0.192 1.863 0.054 n y n ruditapes_lrc6827 1.098 0.193 ferritin /// 0046872 // metal ion binding 319.385 350.825 n n n ruditapes_c1454 -1.359 0.193 43.992 32.372 n n n ruditapes_c20022 -1.417 0.193 34.639 24.445 n n n ruditapes_c9322 -1.964 0.193 10.824 5.512 n y n ruditapes_c8084 -2.133 0.193 novel protein vertebrate hexosaminidase a (alpha polypeptide) 8.981 4.21 n y n ruditapes2_c622 -2.14 0.193 growth arrest and dna-damage- gamma interacting protein 1 8.91 4.163 n y n ruditapes_c17788 13.041 0.193 0.164 2.137 n y n ruditapes2_c1680 ? 0.193 0 1.693 n y n ruditapes_c13965 -3.065 0.193 4.989 1.628 n y n ruditapes_c24503 -3.459 0.193 4.365 1.262 n y n ruditapes_c22889 -3.871 0.193 3.91 1.01 n y n ruditapes_lrc27612 -4.726 0.193 3.326 0.704 n y n ruditapes_lrc32877 -5.388 0.193 3.047 0.565 n y n ruditapes_c8236 -11.675 0.193 -methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase) /// 0005524 // ATP binding /// 0005542 // folic acid binding /// 0007166 // cell surface receptor linked signal transduction /// 0030272 // 5-formyltetrahydrofolate cyclo-ligase activity /// 0016020 // membrane /// 0009396 // folic acid and derivative biosynthetic process /// 0004888 // transmembrane receptor activity /// 0015942 // formate metabolic process /// 0005829 // cytosol /// 0000287 // magnesium ion binding 2.206 0.189 n y n ruditapes2_c5454 -1.155 0.194 ribosomal protein l17 /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 191.949 166.178 n n n ruditapes2_c1473 -1.336 0.194 mgc53444 protein /// 0042254 // ribosome biogenesis /// 0005634 // nucleus /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 48.898 36.605 n n n ruditapes2_lrc4226 -1.479 0.194 27.894 18.855 n n n ruditapes_c19326 1.603 0.194 serine threonine-protein 11.761 18.855 n y n ruditapes_c3030 -1.528 0.194 24.102 15.778 n y n ruditapes_c2666 -1.544 0.194 23.141 14.988 n y n ruditapes_c7030 -1.586 0.194 20.725 13.064 n y n ruditapes_c15993 -1.631 0.194 18.629 11.421 n y n ruditapes_c19868 -2.046 0.194 9.765 4.773 n y n ruditapes_c11137 -2.366 0.194 7.309 3.089 n y n ruditapes2_c2636 -2.623 0.194 6.168 2.352 n y n ruditapes_c21766 -2.646 0.194 hypothetical protein [Plasmodium berghei strain ANKA] 6.083 2.299 n y n ruditapes_c21511 -2.713 0.194 cg6329- isoform c 5.855 2.159 n y n ruditapes_c13120 -2.756 0.194 5.722 2.077 n y n ruditapes2_c1145 -2.804 0.194 nicotinic acetylcholine receptor subunit type g /// 0009987 // cellular process 5.582 1.991 n y n ruditapes_c14851 -3.005 0.194 5.093 1.695 n y n ruditapes_c19806 -6.873 0.194 2.661 0.387 n y n ruditapes2_c748 1.529 0.195 dead box atp-dependent rna helicase "/// 0005524 // ATP binding /// 0015175 // neutral amino acid transmembrane transporter activity /// 0005681 // spliceosomal complex /// 0006520 // cellular amino acid metabolic process /// 0015804 // neutral amino acid transport /// 0006406 // mRNA export from nucleus /// 0042802 // identical protein binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0004004 // ATP-dependent RNA helicase activity /// 0006461 // protein complex assembly /// 0003723 // RNA binding /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome /// 0042605 // peptide antigen binding /// 0005887 // integral to plasma membrane /// 0015184 // L-cystine transmembrane transporter activity /// 0007052 // mitotic spindle organization" 14.712 22.493 n y n ruditapes_c25002 -1.468 0.195 28.787 19.611 n n n ruditapes2_lrc1550 -1.628 0.195 18.744 11.516 n y n ruditapes_c15735 -1.632 0.195 18.552 11.37 n y n ruditapes_c4444 -1.686 0.195 cathepsin l-like proteinase 16.571 9.829 n y n ruditapes_c5329 -1.878 0.195 12.004 6.393 n y n ruditapes_c4150 -2.103 0.195 eukaryotic translation initiation factor 5a /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity 9.165 4.358 n y n ruditapes_c3181 -2.224 0.195 8.176 3.677 n y n ruditapes2_c3962 4.047 0.195 0.908 3.676 n y n ruditapes_c31301 4.16 0.195 0.863 3.592 n y n ruditapes2_c449 -2.881 0.195 5.371 1.864 n y n ruditapes_lrc12952 ? 0.195 mitochondrial ribosomal protein s6 /// 0005622 // intracellular 0 1.68 n y n ruditapes_c7078 -4.17 0.195 3.624 0.869 n y n ruditapes_s38962 -4.596 0.195 h+ transporting f1 atp synthase epsilon subunit 3.368 0.733 n y n ruditapes2_lrc3478 -5.003 0.195 3.159 0.631 n y n ruditapes_c29505 -6.32 0.195 2.758 0.436 n y n ruditapes_s34657 -24.461 0.195 1.9 0.078 n y n ruditapes_c8868 -1.556 0.196 22.216 14.28 n y n ruditapes_c10342 -2.035 0.196 9.799 4.815 n y n ruditapes_c19103 -2.141 0.196 8.793 4.106 n y n ruditapes2_c2028 -2.559 0.196 6.34 2.477 n y n ruditapes_c26899 -2.687 0.196 5.884 2.19 n y n ruditapes2_lrc5752 -2.939 0.196 predicted protein [Nematostella vectensis] 5.198 1.769 n y n ruditapes_c20742 ? 0.196 0 1.669 n y n ruditapes_c9348 -3.177 0.196 reverse transcriptase 4.726 1.488 n y n ruditapes_c16261 -3.397 0.196 4.385 1.291 n y n ruditapes2_c510 -3.437 0.196 mitochondrial ribosomal protein s14 /// 0005840 // ribosome 4.327 1.259 n y n ruditapes_c23038 -44.475 0.196 1.788 0.04 n y n ruditapes_c12360 -? 0.196 1.671 0 n y n ruditapes_c15614 -1.774 0.197 13.999 7.891 n y n ruditapes_c25713 -1.908 0.197 11.422 5.987 n y n ruditapes_c22151 -2.035 0.197 9.787 4.81 n y n ruditapes_c22348 -2.064 0.197 9.465 4.587 n y n ruditapes2_lrc4150 -2.14 0.197 tropomyosin 8.745 4.086 n y n ruditapes_c12774 -2.183 0.197 8.409 3.852 n y n ruditapes2_lrc1675 -2.204 0.197 8.218 3.729 n y n ruditapes_c14211 -2.483 0.197 6.622 2.667 n y n ruditapes_c19384 -2.571 0.197 6.279 2.442 n y n ruditapes2_c1488 -2.684 0.197 fatty acid binding protein adipocyte 5.874 2.189 n y n ruditapes_c14241 -3 0.197 5.055 1.685 n y n ruditapes_c11092 -3.307 0.197 4.503 1.362 n y n ruditapes2_lrc4924 -3.849 0.197 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 3.861 1.003 n y n ruditapes2_c2542 -3.921 0.197 3.795 0.968 n y n ruditapes_c8905 -4.389 0.197 salivary c-type lectin 3.445 0.785 n y n ruditapes_c10395 -5.337 0.197 3.014 0.565 n y n ruditapes_c8491 -6.301 0.197 2.739 0.435 n y n ruditapes_c11524 -7.116 0.197 reverse transcriptase 2.584 0.363 n y n ruditapes_c26386 -8.895 0.197 2.354 0.265 n y n ruditapes_c16781 -12.231 0.197 2.141 0.175 n y n ruditapes2_c113 -1.321 0.198 51.994 39.373 n n n ruditapes_c16459 -1.397 0.198 36.775 26.331 n n n ruditapes2_c1918 -1.474 0.198 27.818 18.877 n n n ruditapes2_c586 -1.691 0.198 16.154 9.552 n y n ruditapes2_c1934 -1.693 0.198 16.093 9.505 n y n ruditapes2_c1174 -1.75 0.198 14.54 8.31 n y n ruditapes_c12490 2.308 0.198 solute carrier family 34 (sodium phosphate) member 2 3.161 7.296 n y n ruditapes2_c2781 -1.904 0.198 11.416 5.995 n y n ruditapes_c570 -1.966 0.198 10.562 5.372 n y n ruditapes_c28972 -2.013 0.198 9.973 4.956 n y n ruditapes_c17867 -2.556 0.198 6.31 2.469 n y n ruditapes2_c1142 -2.579 0.198 proteasome ( macropain) beta 4 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005813 // centrosome /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 6.202 2.405 n y n ruditapes_c31068 -2.669 0.198 5.9 2.211 n y n ruditapes_c21113 10.568 0.198 0.208 2.203 n y n ruditapes_c5351 -2.884 0.198 peptidylprolyl isomerase d (cyclophilin d) /// 0005488 // binding /// 0009611 // response to wounding 5.279 1.83 n y n ruditapes_c30724 ? 0.198 0 1.658 n y n ruditapes_c26686 -3.319 0.198 4.455 1.342 n y n ruditapes_c10717 -4.33 0.198 3.478 0.803 n y n ruditapes_c11056 -5.357 0.198 2.985 0.557 n y n ruditapes_c10859 -5.436 0.198 2.96 0.545 n y n ruditapes_lrc32130 -8.339 0.198 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 2.404 0.288 n y n ruditapes_c33768 1.541 0.199 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 13.925 21.455 n y n ruditapes_c13711 -1.692 0.199 16.05 9.485 n y n ruditapes_c4491 -2.022 0.199 9.845 4.87 n y n ruditapes_c31990 -2.057 0.199 9.442 4.589 n y n ruditapes_c12669 -2.088 0.199 9.141 4.378 n y n ruditapes_c15510 -2.438 0.199 6.777 2.779 n y n ruditapes_c18839 -2.528 0.199 6.379 2.523 n y n ruditapes_c25158 -3.058 0.199 4.886 1.598 n y n ruditapes_lrc35080 1.236 0.2 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 61.793 76.403 n n n ruditapes2_c3817 -1.346 0.2 45.438 33.768 n n n ruditapes_c2649 -1.421 0.2 33.112 23.307 n n n ruditapes_c2577 -1.641 0.2 17.771 10.83 n y n ruditapes_c31954 -1.744 0.2 14.504 8.314 n y n ruditapes_lrc20923 -1.928 0.2 10.992 5.7 n y n ruditapes_c21882 -2.068 0.2 9.286 4.49 n y n ruditapes_c15026 -2.267 0.2 7.7 3.396 n y n ruditapes_c30654 -2.36 0.2 7.139 3.025 n y n ruditapes_c6035 -2.463 0.2 hypothetical protein BRAFLDRAFT_220632 [Branchiostoma floridae] 6.638 2.695 n y n ruditapes_c25343 -2.509 0.2 6.441 2.567 n y n ruditapes_s39326 7.645 0.2 0.32 2.45 n y n ruditapes_c27785 -2.588 0.2 6.133 2.369 n y n ruditapes_c30682 ? 0.2 0 1.646 n y n ruditapes_c8333 -3.216 0.2 4.586 1.426 n y n ruditapes_c3513 -3.475 0.2 4.199 1.208 n y n ruditapes_c7692 -6.158 0.2 sjogren s syndrome nuclear autoantigen 1 /// 0005634 // nucleus /// 0042802 // identical protein binding 2.734 0.444 n y n ruditapes2_c1382 -? 0.2 myc homolog 1.641 0 n y n ruditapes_c8521 1.385 0.201 25.339 35.087 n n n ruditapes_c13660 1.557 0.201 13.12 20.423 n y n ruditapes2_c1263 1.593 0.201 11.74 18.7 n y n ruditapes_c1739 -1.537 0.201 22.853 14.872 n y n ruditapes_c10840 -1.627 0.201 18.258 11.222 n y n ruditapes_c5449 -1.63 0.201 hypothetical protein BRAFLDRAFT_123087 [Branchiostoma floridae] 18.166 11.146 n y n ruditapes_c15168 2.017 0.201 4.693 9.467 n y n ruditapes2_c666 2.099 0.201 tgf beta-inducible nuclear protein 1 "/// 0005634 // nucleus /// 0006911 // phagocytosis, engulfment" 4.135 8.678 n y n ruditapes_c15858 -1.824 0.201 12.668 6.945 n y n ruditapes_c12472 -1.835 0.201 12.481 6.803 n y n ruditapes_c14052 2.409 0.201 2.768 6.667 n y n ruditapes_lrc20080 -1.864 0.201 11.931 6.4 n y n ruditapes_c24537 -2.93 0.201 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 5.118 1.747 n y n ruditapes2_c909 -2.949 0.201 5.075 1.721 n y n ruditapes_lrc10072 -3.124 0.201 4.714 1.509 n y n ruditapes_c1459 -1.563 0.202 21.181 13.554 n y n ruditapes_c2037 -1.635 0.202 17.85 10.919 n y n ruditapes_c24742 -1.69 0.202 15.927 9.424 n y n ruditapes_c18146 -1.798 0.202 13.181 7.333 n y n ruditapes_c14721 -1.803 0.202 dolichyl-diphosphooligosaccharide protein glycotransferase /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0005789 // endoplasmic reticulum membrane /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity 13.004 7.211 n y n ruditapes_c25092 -1.957 0.202 coiled-coil domain containing 59 10.482 5.358 n y n ruditapes_c19407 -2.197 0.202 8.099 3.686 n y n ruditapes2_c1204 -2.214 0.202 btb poz domain-containing protein 3 7.987 3.608 n y n ruditapes_c10163 -2.349 0.202 7.137 3.038 n y n ruditapes_c5774 -2.94 0.202 5.071 1.725 n y n ruditapes_c721 -5.661 0.202 cd209l1 protein "/// 0022415 // viral reproductive process /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process /// 0044403 // symbiosis, encompassing mutualism through parasitism" 2.837 0.501 n y n ruditapes_lrc33473 -5.93 0.202 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.77 0.467 n y n ruditapes_c14287 -6.523 0.202 2.632 0.404 n y n ruditapes_lrc35396 -9.636 0.202 2.241 0.233 n y n ruditapes_c7424 -11.437 0.202 2.127 0.186 n y n ruditapes_c10915 -26.685 0.202 1.826 0.068 n y n ruditapes2_c30 -1.263 0.203 70.722 55.98 n n n ruditapes_c22762 -1.272 0.203 67.059 52.74 n n n ruditapes_c10700 -1.567 0.203 20.832 13.292 n y n ruditapes_c5812 -1.766 0.203 13.806 7.818 n y n ruditapes_c13871 -1.802 0.203 13.031 7.232 n y n ruditapes2_c1555 -1.804 0.203 12.97 7.189 n y n ruditapes_c15643 -1.997 0.203 9.947 4.98 n y n ruditapes_c2787 -2.3 0.203 7.386 3.212 n y n ruditapes_c27721 -2.619 0.203 5.926 2.263 n y n ruditapes2_c710 -3.619 0.203 3.974 1.098 n y n ruditapes_c13955 -3.876 0.203 3.731 0.963 n y n ruditapes_c26287 -42.252 0.203 1.743 0.041 n y n ruditapes_c17137 -? 0.203 1.623 0 n y n ruditapes_c15015 -? 0.203 1.618 0 n y n ruditapes_c18632 1.702 0.204 u2 small nuclear /// 0005488 // binding 8.625 14.683 n y n ruditapes_c7640 -1.917 0.204 10.936 5.705 n y n ruditapes_c27321 19.337 0.204 0.098 1.887 n y n ruditapes_lrc33797 -3.535 0.204 mitochondrial ribosomal protein s18a /// 0005622 // intracellular 4.058 1.148 n y n ruditapes_c22198 -7.413 0.204 2.453 0.331 n y n ruditapes_c27028 -11.119 0.204 2.125 0.191 n y n ruditapes_c22750 -16.308 0.204 1.949 0.119 n y n ruditapes_c14095 -1.455 0.205 28.733 19.748 n n n ruditapes2_c3374 -1.619 0.205 calponin transgelin 18.322 11.32 n y n ruditapes_c11919 -1.638 0.205 17.512 10.691 n y n ruditapes_c1065 2.31 0.205 3.055 7.059 n y n ruditapes_c3861 -1.918 0.205 10.872 5.668 n y n ruditapes_c26418 2.665 0.205 2.1 5.597 n y n ruditapes2_c944 -2.498 0.205 6.34 2.538 n y n ruditapes_c10997 -2.65 0.205 5.773 2.179 n y n ruditapes2_c437 -3.058 0.205 4.751 1.554 n y n ruditapes_c21547 -3.799 0.205 3.771 0.993 n y n ruditapes_c28709 -4.2 0.205 3.45 0.821 n y n ruditapes_lrc35703 -6.301 0.205 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0009055 // electron carrier activity" 2.645 0.42 n y n ruditapes_c23573 -1.499 0.206 24.821 16.56 n n n ruditapes_c2497 -1.735 0.206 14.395 8.298 n y n ruditapes_c7154 -1.742 0.206 14.214 8.161 n y n ruditapes_c15560 -1.813 0.206 12.628 6.964 n y n ruditapes_c11434 -1.893 0.206 11.215 5.925 n y n ruditapes_c19354 -1.972 0.206 10.114 5.128 n y n ruditapes2_c3585 -2.039 0.206 selenium binding protein 1 9.332 4.576 n y n ruditapes_c12963 -2.358 0.206 chromosome 10 open reading frame 107 6.973 2.957 n y n ruditapes_c10234 -2.538 0.206 6.149 2.423 n y n ruditapes_c29084 -2.7 0.206 5.588 2.069 n y n ruditapes_c19387 -3.018 0.206 4.815 1.595 n y n ruditapes_c21239 -3.065 0.206 4.713 1.538 n y n ruditapes_c23554 -3.113 0.206 4.629 1.487 n y n ruditapes_c23578 -3.443 0.206 4.137 1.201 n y n ruditapes_c1545 -4.031 0.206 3.559 0.883 n y n ruditapes_lrc30962 -5.189 0.206 2.942 0.567 n y n ruditapes_c10960 -6.115 0.206 chromosome 20 open reading frame 85 2.676 0.438 n y n ruditapes2_lrc4163 -7.413 0.206 2.438 0.329 n y n ruditapes_c4118 -8.895 0.206 2.261 0.254 n y n ruditapes_c20418 2.019 0.207 4.552 9.189 n y n ruditapes_c28791 -1.743 0.207 14.118 8.102 n y n ruditapes_c26002 -1.975 0.207 10.008 5.068 n y n ruditapes2_lrc5216 4.704 0.207 ferritin /// 0016491 // oxidoreductase activity /// 0005506 // iron ion binding 0.659 3.098 n y n ruditapes2_c2849 -2.548 0.207 6.07 2.382 n y n ruditapes_c24120 8.394 0.207 protein 0.273 2.294 n y n ruditapes_lrc39219 -2.78 0.207 5.335 1.919 n y n ruditapes_c25115 ? 0.207 0 1.592 n y n ruditapes2_c2650 ? 0.207 0 1.589 n y n ruditapes_c26948 -3.155 0.207 mgc79558 protein 4.542 1.44 n y n ruditapes_lrc34151 -4.686 0.207 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 3.143 0.671 n y n ruditapes2_c2239 -5.93 0.207 bone morphogenetic protein 2.707 0.457 n y n ruditapes_c16911 -6.375 0.207 2.601 0.408 n y n ruditapes_lrc33666 -33.357 0.207 1.743 0.052 n y n ruditapes_c4112 -? 0.207 1.595 0 n y n ruditapes_c6617 -1.213 0.208 ribosomal protein l17 /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 100.75 83.053 n n n ruditapes_c14807 -1.251 0.208 75.481 60.36 n n n ruditapes_c2747 -1.367 0.208 39.783 29.104 n n n ruditapes_c14774 -1.593 0.208 19.138 12.016 n y n ruditapes_c22087 -1.712 0.208 14.845 8.669 n y n ruditapes2_lrc5803 2.278 0.208 3.131 7.133 n y n ruditapes_c26409 2.655 0.208 2.092 5.554 n y n ruditapes2_c3317 -2.266 0.208 sarcoplasmic calcium-binding protein 7.444 3.286 n y n ruditapes_lrc35427 -2.493 0.208 6.269 2.514 n y n ruditapes_c21779 -2.538 0.208 atp synthase mitochondrial f1 complex assembly factor 1 6.101 2.404 n y n ruditapes_c11912 -2.7 0.208 5.532 2.049 n y n ruditapes_c28131 -2.715 0.208 family with sequence similarity 32 member a variant 1 /// 0005730 // nucleolus 5.495 2.024 n y n ruditapes_c23393 -3.032 0.208 4.744 1.565 n y n ruditapes_c2214 -3.354 0.208 ndufab1 protein /// 0044237 // cellular metabolic process /// 0005739 // mitochondrion /// 0005488 // binding /// 0008610 // lipid biosynthetic process 4.21 1.255 n y n ruditapes_c24008 -3.572 0.208 3.939 1.103 n y n ruditapes_lrc25108 -3.867 0.208 3.661 0.947 n y n ruditapes_lrc36071 -4.536 0.208 3.201 0.706 n y n ruditapes_c22296 -9.213 0.208 2.22 0.241 n y n ruditapes2_c4168 -1.264 0.209 beta 2c /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0042267 // natural killer cell mediated cytotoxicity /// 0005874 // microtubule /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding /// 0007018 // microtubule-based movement 68.695 54.342 n n n ruditapes_c10139 -1.99 0.209 9.752 4.901 n y n ruditapes_c27792 -2.011 0.209 9.504 4.726 n y n ruditapes_c13757 -2.04 0.209 9.214 4.517 n y n ruditapes_lrc8552 -2.049 0.209 9.12 4.452 n y n ruditapes_c19086 -2.058 0.209 9.018 4.381 n y n ruditapes_c29949 -2.338 0.209 gtp-binding protein /// 0000166 // nucleotide binding 6.988 2.989 n y n ruditapes_c22639 -2.406 0.209 6.643 2.761 n y n ruditapes_c13386 -2.589 0.209 rna processing factor 1 /// 0005730 // nucleolus /// 0003723 // RNA binding 5.884 2.272 n y n ruditapes_c20398 -3.372 0.209 4.172 1.238 n y n ruditapes_c19307 -3.405 0.209 4.121 1.21 n y n ruditapes_c7867 -5.458 0.209 2.814 0.515 n y n ruditapes_c29268 -24.461 0.209 1.788 0.073 n y n ruditapes_c13473 -26.685 0.209 1.77 0.066 n y n ruditapes2_c3612 1.24 0.21 qm-like protein 57.247 71.013 n n n ruditapes_c14029 1.552 0.21 12.758 19.803 n y n ruditapes2_c3423 1.601 0.21 11.014 17.634 n y n ruditapes_c13270 -1.648 0.21 16.749 10.162 n y n ruditapes_c26537 -1.807 0.21 12.509 6.921 n y n ruditapes_c20729 -1.979 0.21 9.841 4.973 n y n ruditapes_c14488 -2.003 0.21 9.588 4.787 n y n ruditapes_lrc22379 -2.022 0.21 9.373 4.636 n y n ruditapes_c7153 -2.088 0.21 8.719 4.176 n y n ruditapes_lrc34619 -2.118 0.21 mitochondrial atpase 8.452 3.991 n y n ruditapes_c11225 -2.806 0.21 5.212 1.857 n y n ruditapes2_c2528 -3.177 0.21 4.434 1.396 n y n ruditapes_c18983 -4.257 0.21 3.337 0.784 n y n ruditapes_c26863 -5.782 0.21 2.702 0.467 n y n ruditapes_c8615 -8.895 0.21 2.229 0.251 n y n ruditapes_lrc38323 -11.119 0.21 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation 2.069 0.186 n y n ruditapes2_c157 -1.123 0.211 ribosomal protein l31 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 277.488 247.096 n n n ruditapes_c8697 -1.461 0.211 27.485 18.814 n n n ruditapes2_c1152 -1.527 0.211 22.398 14.669 n y n ruditapes_c22190 -1.537 0.211 21.834 14.207 n y n ruditapes_c9772 -1.793 0.211 12.755 7.112 n y n ruditapes_c8741 -1.81 0.211 12.405 6.855 n y n ruditapes_c11964 -1.825 0.211 12.08 6.618 n y n ruditapes_c12988 -1.851 0.211 11.625 6.279 n y n ruditapes_c19026 -1.883 0.211 11.139 5.917 n y n ruditapes_lrc32397 -1.964 0.211 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 10.004 5.094 n y n ruditapes_s40183 2.906 0.211 60s ribosomal protein l12a /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0005730 // nucleolus /// 0000003 // reproduction /// 0022625 // cytosolic large ribosomal subunit /// 0006412 // translation /// 0000027 // ribosomal large subunit assembly /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009792 // embryonic development ending in birth or egg hatching 1.662 4.829 n y n ruditapes_c8551 -1.997 0.211 9.61 4.813 n y n ruditapes_c8380 -2.272 0.211 7.297 3.212 n y n ruditapes_c17367 -2.327 0.211 6.973 2.996 n y n ruditapes_c17484 ? 0.211 0 1.568 n y n ruditapes_c9621 -3.209 0.211 4.377 1.364 n y n ruditapes_c25645 -3.336 0.211 4.178 1.252 n y n ruditapes_c6979 -3.558 0.211 endo-beta- -glucanase "/// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds /// 0008152 // metabolic process /// 0030246 // carbohydrate binding" 3.908 1.098 n y n ruditapes_c21188 -3.604 0.211 3.86 1.071 n y n ruditapes_c23747 -3.76 0.211 3.7 0.984 n y n ruditapes_c16456 -4.777 0.211 3.043 0.637 n y n ruditapes_c23541 -6.354 0.211 2.557 0.402 n y n ruditapes_c24953 -17.79 0.211 1.856 0.104 n y n ruditapes_c24835 -20.014 0.211 1.821 0.091 n y n ruditapes2_c152 -1.558 0.212 mitochondrial ribosomal protein s10 /// 0005739 // mitochondrion /// 0005840 // ribosome 20.547 13.187 n y n ruditapes_lrc32643 1.744 0.212 ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development /// 0051536 // iron-sulfur cluster binding 7.533 13.14 n y n ruditapes2_c688 -1.606 0.212 18.282 11.381 n y n ruditapes_c14699 -1.633 0.212 17.142 10.496 n y n ruditapes_c16455 -1.712 0.212 14.64 8.553 n y n ruditapes_c20922 -1.76 0.212 13.399 7.613 n y n ruditapes_c22031 2.318 0.212 2.933 6.797 n y n ruditapes_c3569 -1.883 0.212 11.075 5.881 n y n ruditapes2_c2495 -1.998 0.212 9.546 4.778 n y n ruditapes2_lrc2480 -2.025 0.212 9.247 4.567 n y n ruditapes_c11803 -2.046 0.212 9.019 4.408 n y n ruditapes_c30041 -2.406 0.212 6.532 2.715 n y n ruditapes_c10640 -2.683 0.212 5.489 2.046 n y n ruditapes2_lrc3424 14.99 0.212 alpha 3 type vi collagen isoform 1 precursor 0.127 1.901 n y n ruditapes2_c1796 -2.811 0.212 loc566173 protein 5.139 1.828 n y n ruditapes_c12947 -2.995 0.212 4.74 1.582 n y n ruditapes_c26379 ? 0.212 0 1.559 n y n ruditapes_c26687 -3.139 0.212 4.475 1.425 n y n ruditapes_c18703 -4.043 0.212 3.455 0.855 n y n ruditapes_c11755 -5.337 0.212 2.818 0.528 n y n ruditapes2_c106 -5.559 0.212 2.744 0.494 n y n ruditapes2_c3666 -7.264 0.212 stanniocalcin-like protein 2.391 0.329 n y n ruditapes_lrc37230 -15.566 0.212 1.896 0.122 n y n ruditapes_c6009 -31.133 0.212 1.715 0.055 n y n ruditapes2_lrc3847 1.632 0.213 60s ribosomal protein l9 /// 0044444 // cytoplasmic part /// 0043232 // intracellular non-membrane-bounded organelle /// 0009987 // cellular process 9.976 16.279 n y n ruditapes_lrc11926 -1.554 0.213 20.719 13.336 n y n ruditapes_lrc14435 -2.062 0.213 8.821 4.277 n y n ruditapes_c4511 -2.092 0.213 8.556 4.089 n y n ruditapes_c27971 -2.257 0.213 7.32 3.243 n y n ruditapes_c4836 -2.478 0.213 6.206 2.505 n y n ruditapes_c21733 -2.612 0.213 glucan endo- -beta-glucosidase /// 0003824 // catalytic activity 5.696 2.181 n y n ruditapes_c24469 14.84 0.213 0.128 1.897 n y n ruditapes_c7791 -3.113 0.213 predicted protein [Nematostella vectensis] 4.499 1.445 n y n ruditapes_c6483 -3.494 0.213 3.943 1.128 n y n ruditapes2_c4298 -3.544 0.213 wsc domain-containing protein 3.888 1.097 n y n ruditapes_c12191 -4.157 0.213 3.352 0.806 n y n ruditapes_c27331 -4.309 0.213 3.266 0.758 n y n ruditapes_c28618 -4.695 0.213 3.062 0.652 n y n ruditapes_c16823 -8.524 0.213 2.233 0.262 n y n ruditapes_c25670 -11.675 0.213 2.018 0.173 n y n ruditapes_c2137 1.281 0.214 beta 2 /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 42.401 54.301 n n n ruditapes_c3966 -1.45 0.214 28.173 19.435 n n n ruditapes_c6806 -1.568 0.214 19.868 12.675 n y n ruditapes_c15115 -1.591 0.214 18.761 11.792 n y n ruditapes_c29253 -1.745 0.214 13.627 7.808 n y n ruditapes_c19468 -2.022 0.214 9.186 4.544 n y n ruditapes_c5526 -2.274 0.214 7.181 3.158 n y n ruditapes2_c1390 -2.931 0.214 4.825 1.646 n y n ruditapes_c2976 ? 0.214 0 1.546 n y n ruditapes_c3491 -3.283 0.214 4.208 1.282 n y n ruditapes_c12904 -3.614 0.214 3.806 1.053 n y n ruditapes_c18534 -3.736 0.214 3.686 0.987 n y n ruditapes_s38695 -5.003 0.214 60s ribosomal protein l9 /// 0005622 // intracellular 2.909 0.581 n y n ruditapes_c18738 -6.267 0.214 mitochondrial ribosomal protein l10 2.551 0.407 n y n ruditapes_lrc14658 -9.636 0.214 2.131 0.221 n y n ruditapes_lrc36453 -1.409 0.215 32.405 23.002 n n n ruditapes_c7170 -1.418 0.215 transcription factor ap-1 /// 0003700 // transcription factor activity /// 0008013 // beta-catenin binding /// 0005667 // transcription factor complex /// 0046686 // response to cadmium ion /// 0051597 // response to methylmercury /// 0060070 // Wnt receptor signaling pathway through beta-catenin 31.339 22.104 n n n ruditapes_c14683 -1.625 0.215 17.258 10.623 n y n ruditapes_c20718 -1.673 0.215 15.548 9.291 n y n ruditapes_c7405 -1.797 0.215 12.455 6.932 n y n ruditapes_c1026 -2.209 0.215 7.577 3.43 n y n ruditapes2_lrc3126 -2.269 0.215 7.203 3.175 n y n ruditapes_c31314 -2.52 0.215 5.981 2.373 n y n ruditapes2_c93 -2.582 0.215 5.764 2.233 n y n ruditapes_c27995 -4.003 0.215 3.438 0.859 n y n ruditapes_c12239 -1.539 0.216 21.242 13.8 n y n ruditapes_c26152 -1.745 0.216 13.518 7.749 n y n ruditapes_c5466 2.464 0.216 zinc finger domain containing protein 2.446 6.027 n y n ruditapes_c7567 -1.866 0.216 hypothetical protein IscW_ISCW017001 [Ixodes scapularis] 11.123 5.962 n y n ruditapes2_c6242 -1.968 0.216 cytoplasmic dynein 1 heavy chain 1 /// 0005515 // protein binding /// 0043229 // intracellular organelle /// 0017111 // nucleoside-triphosphatase activity /// 0005737 // cytoplasm /// 0007018 // microtubule-based movement 9.736 4.946 n y n ruditapes_lrc32906 -2.019 0.216 ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development /// 0051536 // iron-sulfur cluster binding 9.136 4.526 n y n ruditapes_lrc30216 -2.076 0.216 8.603 4.143 n y n ruditapes2_c559 -2.133 0.216 8.099 3.798 n y n ruditapes_c1359 -2.204 0.216 7.574 3.437 n y n ruditapes_lrc32634 -2.243 0.216 ribosomal protein l21 /// 0005622 // intracellular 7.308 3.258 n y n ruditapes_c29094 ? 0.216 0 1.528 n y n ruditapes2_c5991 -3.062 0.216 4.531 1.48 n y n ruditapes_lrc8451 -3.24 0.216 4.224 1.304 n y n ruditapes_lrc35948 -3.666 0.216 3.707 1.011 n y n ruditapes_c19460 -3.825 0.216 3.562 0.931 n y n ruditapes_c38574 -4.448 0.216 alkaline phosphatase /// 0005886 // plasma membrane /// 0004035 // alkaline phosphatase activity /// 0046677 // response to antibiotic 3.136 0.705 n y n ruditapes_c28326 -11.119 0.216 2.018 0.182 n y n ruditapes_lrc31927 -? 0.216 1.534 0 n y n ruditapes_c26158 -1.501 0.217 23.555 15.69 n y n ruditapes_c27679 -1.688 0.217 14.954 8.858 n y n ruditapes_lrc32652 -2.137 0.217 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 8.017 3.751 n y n ruditapes_c10404 -2.168 0.217 7.804 3.599 n y n ruditapes_c20543 -2.402 0.217 6.431 2.678 n y n ruditapes_c20623 -2.502 0.217 tripartite motif-containing 59 5.985 2.392 n y n ruditapes2_c5995 -3.494 0.217 translocase of outer mitochondrial membrane 7 homolog 3.876 1.109 n y n ruditapes2_lrc4765 -3.953 0.217 3.454 0.874 n y n ruditapes_c20155 -9.34 0.217 2.119 0.227 n y n ruditapes_c7535 -1.484 0.218 24.765 16.693 n n n ruditapes_c5294 -1.57 0.218 19.433 12.38 n y n ruditapes_c13185 2.688 0.218 1.938 5.208 n y n ruditapes_c2200 -1.96 0.218 secreted salivary gland /// 0008270 // zinc ion binding /// 0005622 // intracellular 9.724 4.962 n y n ruditapes_c13638 -1.986 0.218 9.428 4.748 n y n ruditapes_c6391 -2.142 0.218 prefoldin subunit 2 7.942 3.708 n y n ruditapes2_c2807 -2.154 0.218 7.876 3.657 n y n ruditapes_c11722 -2.402 0.218 6.392 2.661 n y n ruditapes_c19816 -2.436 0.218 6.256 2.569 n y n ruditapes_c29733 -2.466 0.218 6.127 2.485 n y n ruditapes_c9774 -2.557 0.218 5.756 2.251 n y n ruditapes_lrc23561 -2.636 0.218 5.492 2.083 n y n ruditapes2_lrc4836 -2.965 0.218 4.663 1.573 n y n ruditapes_c27506 ? 0.218 novel protein vertebrate low density lipo protein 1b (deleted in tumors) 0 1.52 n y n ruditapes2_c3466 -5.121 0.218 cu zn superoxide dismutase /// 0055114 // oxidation reduction /// 0005507 // copper ion binding /// 0004784 // superoxide dismutase activity /// 0042493 // response to drug /// 0006878 // cellular copper ion homeostasis /// 0006801 // superoxide metabolic process /// 0005758 // mitochondrial intermembrane space /// 0009409 // response to cold /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0016209 // antioxidant activity /// 0006882 // cellular zinc ion homeostasis 2.813 0.549 n y n ruditapes_c19979 -5.745 0.218 gag-like protein 2.624 0.457 n y n ruditapes_c8810 -8.228 0.218 2.214 0.269 n y n ruditapes_c12049 -37.804 0.218 1.646 0.044 n y n ruditapes_lrc12827 -? 0.218 1.518 0 n y n ruditapes_lrc20842 -1.459 0.219 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 26.695 18.302 n n n ruditapes_c7430 -1.483 0.219 24.674 16.643 n n n ruditapes_c9870 -1.573 0.219 19.224 12.225 n y n ruditapes_s40035 -1.856 0.219 11.137 6.001 n y n ruditapes_c10003 -1.887 0.219 mgc83645 protein 10.676 5.657 n y n ruditapes_lrc15616 -2.105 0.219 8.229 3.91 n y n ruditapes_c7267 -2.129 0.219 8.027 3.77 n y n ruditapes_c7826 -2.277 0.219 7.032 3.089 n y n ruditapes_c25067 -2.361 0.219 6.57 2.783 n y n ruditapes_c17029 -2.48 0.219 6.023 2.428 n y n ruditapes_c12622 -2.58 0.219 5.665 2.196 n y n ruditapes2_c1866 -2.73 0.219 5.188 1.9 n y n ruditapes_c11638 -3.336 0.219 4.048 1.214 n y n ruditapes_c26143 -4.448 0.219 3.098 0.697 n y n ruditapes_c11937 -7.783 0.219 2.256 0.29 n y n ruditapes_c24133 -7.783 0.219 udp-galactopyranose mutase /// 0016491 // oxidoreductase activity 2.256 0.29 n y n ruditapes_lrc8240 -1.414 0.22 31.208 22.075 n n n ruditapes_lrc32749 -1.481 0.22 24.78 16.737 n n n ruditapes_c12751 -1.545 0.22 20.526 13.285 n y n ruditapes2_lrc4459 -1.595 0.22 glutathione transferase glutathione-s-transferase 18.11 11.353 n y n ruditapes_c29895 -1.717 0.22 14.008 8.158 n y n ruditapes2_c1333 -1.806 0.22 12 6.643 n y n ruditapes_c21328 -1.841 0.22 11.377 6.18 n y n ruditapes_lrc34939 -1.975 0.22 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 9.488 4.803 n y n ruditapes_c3718 -2.27 0.22 tetraspanin 3 7.033 3.098 n y n ruditapes_c13551 -2.452 0.22 6.13 2.5 n y n ruditapes_c18239 -3.16 0.22 4.279 1.354 n y n ruditapes_c13929 -3.934 0.22 holocytochrome c synthase (cytochrome c heme-lyase) /// 0005739 // mitochondrion /// 0004408 // holocytochrome-c synthase activity 3.419 0.869 n y n ruditapes_c24178 -4.818 0.22 2.916 0.605 n y n ruditapes_s40316 -5.683 0.22 predicted protein [Nematostella vectensis] 2.617 0.461 n y n ruditapes_c12447 -6.671 0.22 2.402 0.36 n y n ruditapes_c30414 -? 0.22 1.504 0 n y n ruditapes_c2394 -1.297 0.221 53.485 41.248 n n n ruditapes_c1232 -1.468 0.221 25.676 17.491 n n n ruditapes2_c458 -2.146 0.221 holocytochrome c synthase (cytochrome c heme-lyase) /// 0055114 // oxidation reduction /// 0005743 // mitochondrial inner membrane /// 0004408 // holocytochrome-c synthase activity /// 0005506 // iron ion binding /// 0009887 // organ morphogenesis 7.812 3.641 n y n ruditapes_lrc15999 -2.337 0.221 6.617 2.831 n y n ruditapes_c4847 -2.391 0.221 6.367 2.663 n y n ruditapes_c30883 -2.999 0.221 4.545 1.516 n y n ruditapes_s40199 ? 0.221 lysozyme [Venerupis philippinarum] 0 1.501 n y n ruditapes_c17639 -3.391 0.221 3.932 1.159 n y n ruditapes_c8431 -4.448 0.221 3.068 0.69 n y n ruditapes_c10922 -44.475 0.221 1.601 0.036 n y n ruditapes_c24765 -? 0.221 1.5 0 n y n ruditapes_c22538 -1.673 0.222 15.063 9.002 n y n ruditapes_c7039 -1.958 0.222 acylphosphatase organ-common type isozyme variant 1 9.608 4.906 n y n ruditapes2_c783 -2.039 0.222 8.725 4.278 n y n ruditapes_c30197 -2.079 0.222 8.355 4.018 n y n ruditapes2_c2761 -2.154 0.222 7.728 3.587 n y n ruditapes_c14362 -2.176 0.222 7.571 3.479 n y n ruditapes_c17851 -2.259 0.222 7.042 3.118 n y n ruditapes_c16857 -2.306 0.222 6.775 2.938 n y n ruditapes_c10537 -2.398 0.222 6.296 2.625 n y n ruditapes_c28891 11.692 0.222 0.165 1.933 n y n ruditapes_c5458 ? 0.222 0 1.49 n y n ruditapes_c4239 -3.336 0.222 3.987 1.195 n y n ruditapes_c9433 -17.79 0.222 1.77 0.099 n y n ruditapes_c2081 1.464 0.223 16.425 24.052 n n n ruditapes2_c1454 -1.531 0.223 21.064 13.756 n y n ruditapes2_c1428 -1.534 0.223 20.844 13.584 n y n ruditapes_c17774 -2.205 0.223 7.325 3.322 n y n ruditapes_c21279 -2.347 0.223 6.52 2.778 n y n ruditapes_lrc33285 -2.358 0.223 predicted protein [Nematostella vectensis] 6.465 2.742 n y n ruditapes_c25861 -2.386 0.223 6.34 2.657 n y n ruditapes_c9473 8.694 0.223 0.242 2.106 n y n ruditapes_c24209 -2.78 0.223 mitochondrial ribosomal protein l18 /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part /// 0043229 // intracellular organelle 4.973 1.789 n y n ruditapes_c15246 -2.981 0.223 4.533 1.521 n y n ruditapes_c15713 ? 0.223 0 1.484 n y n ruditapes_c4886 -4.144 0.223 3.222 0.777 n y n ruditapes_c15754 -4.368 0.223 3.088 0.707 n y n ruditapes_c18647 -5.745 0.223 2.568 0.447 n y n ruditapes_c12713 -40.028 0.223 1.602 0.04 n y n ruditapes_c26296 -40.028 0.223 1.602 0.04 n y n ruditapes2_c1081 -1.32 0.224 46.405 35.156 n n n ruditapes2_c662 -1.389 0.224 33.755 24.296 n n n ruditapes_c5667 -1.445 0.224 27.331 18.912 n n n ruditapes_c10394 -1.624 0.224 16.635 10.242 n y n ruditapes2_c84 -1.627 0.224 16.533 10.16 n y n ruditapes_c2549 -1.697 0.224 14.286 8.419 n y n ruditapes_c24197 -2.006 0.224 8.966 4.469 n y n ruditapes2_c216 -2.342 0.224 6.515 2.782 n y n ruditapes_c17062 -2.413 0.224 6.18 2.561 n y n ruditapes_c27047 -2.426 0.224 6.136 2.529 n y n ruditapes_s35138 -10.378 0.224 ribosomal protein s8 1.989 0.192 n y n ruditapes_c27726 -11.119 0.224 1.947 0.175 n y n ruditapes2_c1184 -1.453 0.225 26.54 18.265 n n n ruditapes_c19713 -1.534 0.225 20.686 13.483 n y n ruditapes_c20999 -1.543 0.225 20.172 13.072 n y n ruditapes_c20177 -1.593 0.225 17.755 11.142 n y n ruditapes2_c347 -1.825 0.225 lethal neo18 11.379 6.234 n y n ruditapes_lrc34092 -2.926 0.225 4.602 1.573 n y n ruditapes_c17861 -3.037 0.225 4.392 1.446 n y n ruditapes_c378 -3.058 0.225 4.366 1.428 n y n ruditapes_c17047 -3.862 0.225 3.402 0.881 n y n ruditapes_c31997 -4.765 0.225 2.869 0.602 n y n ruditapes_lrc27633 -12.787 0.225 1.873 0.146 n y n ruditapes_c22383 -15.566 0.225 1.79 0.115 n y n ruditapes_s39822 2.318 0.226 elongation factor 1-beta 2.762 6.401 n y n ruditapes_c5376 -2 0.226 8.961 4.481 n y n ruditapes_s39480 -2.006 0.226 tpsb1 protein /// 0005576 // extracellular region /// 0006508 // proteolysis /// 0016020 // membrane /// 0004252 // serine-type endopeptidase activity 8.891 4.432 n y n ruditapes_c11075 -2.053 0.226 8.415 4.098 n y n ruditapes_c16047 5.274 0.226 serine protease /// 0008236 // serine-type peptidase activity /// 0017080 // sodium channel regulator activity /// 0042493 // response to drug /// 0051385 // response to mineralocorticoid stimulus /// 0005615 // extracellular space /// 0043434 // response to peptide hormone stimulus 0.5 2.636 n y n ruditapes_lrc21226 -2.867 0.226 4.722 1.647 n y n ruditapes_c4228 -3.841 0.226 3.4 0.885 n y n ruditapes_c21677 -6.989 0.226 2.286 0.327 n y n ruditapes_c22300 -1.464 0.227 25.344 17.306 n n n ruditapes_c18746 -1.516 0.227 21.552 14.217 n y n ruditapes_lrc13093 -1.541 0.227 20.139 13.071 n y n ruditapes_lrc9862 -1.616 0.227 16.724 10.347 n y n ruditapes_c21310 -1.752 0.227 12.719 7.258 n y n ruditapes_c11369 -1.817 0.227 11.418 6.283 n y n ruditapes_c8490 -1.822 0.227 11.342 6.224 n y n ruditapes_lrc36091 6.296 0.227 acrosin precursor /// 0016020 // membrane /// 0016787 // hydrolase activity 0.377 2.376 n y n ruditapes_lrc35195 -2.661 0.227 5.223 1.963 n y n ruditapes_c14773 -3.304 0.227 3.941 1.193 n y n ruditapes_c19029 -3.624 0.227 3.575 0.987 n y n ruditapes2_c1838 -4.096 0.227 3.204 0.782 n y n ruditapes2_c2979 -4.596 0.227 2.921 0.636 n y n ruditapes2_c1048 -6.873 0.227 ficolin (collagen fibrinogen domain containing) 3 (hakata antigen) /// 0005488 // binding 2.296 0.334 n y n ruditapes_c17632 -16.308 0.227 cg10185 cg10185-pa 1.758 0.108 n y n ruditapes_c25263 -? 0.227 1.461 0 n y n ruditapes2_lrc3213 -1.283 0.228 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 56.016 43.656 n n n ruditapes2_c228 -1.376 0.228 35.075 25.49 n n n ruditapes2_c2769 -1.453 0.228 26.092 17.953 n n n ruditapes_c13661 -1.679 0.228 14.514 8.644 n y n ruditapes_c347 -1.769 0.228 12.327 6.968 n y n ruditapes_c25664 -1.827 0.228 11.188 6.122 n y n ruditapes_c10745 -1.974 0.228 9.181 4.651 n y n ruditapes_c26132 -2.076 0.228 8.166 3.934 n y n ruditapes_c36349 -2.547 0.228 5.557 2.182 n y n ruditapes_c31124 -3.706 0.228 3.486 0.941 n y n ruditapes_c32024 -3.706 0.228 3.486 0.941 n y n ruditapes2_c985 -6.671 0.228 2.32 0.348 n y n ruditapes_c11562 -6.894 0.228 2.286 0.332 n y n ruditapes2_lrc2789 -9.562 0.228 2.011 0.21 n y n ruditapes_c29099 -? 0.228 1.456 0 n y n ruditapes_c4603 -1.291 0.229 53.495 41.448 n n n ruditapes_c19909 -1.762 0.229 12.414 7.045 n y n ruditapes_c13522 -1.774 0.229 12.183 6.867 n y n ruditapes_c27600 -1.962 0.229 9.253 4.716 n y n ruditapes_lrc31508 -2.409 0.229 6.08 2.524 n y n ruditapes_c3601 6.67 0.229 lps-induced tnf-alpha factor 0.343 2.291 n y n ruditapes_c16858 -2.549 0.229 niemann-pick type c2 5.529 2.169 n y n ruditapes_c20869 -4.209 0.229 3.108 0.738 n y n ruditapes_c24176 -4.448 0.229 26s proteasome non-atpase regulatory subunit 6 /// 0006508 // proteolysis /// 0051439 // regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005838 // proteasome regulatory particle /// 0004175 // endopeptidase activity 2.969 0.668 n y n ruditapes_lrc8643 -4.709 0.229 2.841 0.603 n y n ruditapes_c21257 -5.189 0.229 2.665 0.514 n y n ruditapes_lrc18471 -5.863 0.229 2.471 0.422 n y n ruditapes_c22844 -7.942 0.229 2.135 0.269 n y n ruditapes_c22420 -13.343 0.229 1.821 0.137 n y n ruditapes_c28170 -37.804 0.229 1.567 0.041 n y n ruditapes_lrc33366 -1.214 0.23 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 90.647 74.66 n n n ruditapes_c22231 1.301 0.23 34.783 45.247 n n n ruditapes_c2303 1.432 0.23 18.093 25.903 n n n ruditapes_s40449 -1.457 0.23 ribosomal protein s16 /// 0005811 // lipid particle /// 0042254 // ribosome biogenesis /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 25.601 17.569 n n n ruditapes_c7695 -1.549 0.23 19.44 12.553 n y n ruditapes_c20703 -1.605 0.23 16.89 10.522 n y n ruditapes_c27378 -1.693 0.23 14.011 8.278 n y n ruditapes2_c2509 -2.127 0.23 7.684 3.612 n y n ruditapes_c3039 4.137 0.23 0.748 3.093 n y n ruditapes2_c3506 4.418 0.23 cystatin 10 0.664 2.933 n y n ruditapes2_c2228 -2.458 0.23 5.836 2.374 n y n ruditapes_c1573 -2.57 0.23 GJ19161 [Drosophila virilis] 5.426 2.112 n y n ruditapes_c23161 ? 0.23 e3 ubiquitin-protein ligase hectd1 0 1.44 n y n ruditapes_s38651 -3.867 0.23 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 3.32 0.859 n y n ruditapes_c6924 -4.587 0.23 thyroid hormone receptor interactor 11 /// 0006366 // transcription from RNA polymerase II promoter /// 0003713 // transcription coactivator activity /// 0005634 // nucleus 2.883 0.629 n y n ruditapes_c9269 -6.82 0.23 2.279 0.334 n y n ruditapes_c18643 -1.456 0.231 25.567 17.565 n n n ruditapes_c27345 -1.469 0.231 24.512 16.683 n n n ruditapes_c10932 -1.497 0.231 myo-inositol 1-phosphate synthase a1 /// 0004512 // inositol-3-phosphate synthase activity /// 0005488 // binding /// 0008654 // phospholipid biosynthetic process /// 0005737 // cytoplasm /// 0006021 // inositol biosynthetic process 22.404 14.964 n n n ruditapes_c19100 -1.645 0.231 15.418 9.372 n y n ruditapes_c2010 -1.667 0.231 14.702 8.821 n y n ruditapes_lrc34178 2.112 0.231 ribosomal protein s17 /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 3.557 7.51 n y n ruditapes2_lrc4951 -2.169 0.231 7.337 3.383 n y n ruditapes_lrc15838 5.216 0.231 0.498 2.598 n y n ruditapes2_lrc4918 -2.73 0.231 galactose soluble 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 4.94 1.809 n y n ruditapes_c7452 -2.789 0.231 heat shock 70kda protein 12a 4.801 1.722 n y n ruditapes_c20912 16.638 0.231 ribosome production factor 1 0.103 1.715 n y n ruditapes2_c433 18.212 0.231 0.093 1.689 n y n ruditapes_c22297 ? 0.231 0 1.437 n y n ruditapes_c14373 -3.914 0.231 3.27 0.836 n y n ruditapes_c34955 -5.93 0.231 microsomal glutathione s-transferase 1 /// 0005739 // mitochondrion /// 0004364 // glutathione transferase activity /// 0016020 // membrane 2.439 0.411 n y n ruditapes_c302 -13.787 0.231 1.796 0.13 n y n ruditapes_lrc12462 -? 0.231 cell wall surface anchor family protein /// 0044464 // cell part 1.434 0 n y n ruditapes_lrc28238 1.173 0.232 af506022_1 polyubiquitin /// 0032501 // multicellular organismal process /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0048522 // positive regulation of cellular process /// 0051439 // regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005737 // cytoplasm /// 0006464 // protein modification process 95.458 111.963 n n n ruditapes_c16828 -1.348 0.232 39.055 28.966 n n n ruditapes_c11461 -1.428 0.232 28.089 19.671 n n n ruditapes_c28303 -1.44 0.232 26.822 18.621 n n n ruditapes_c3223 -1.49 0.232 22.837 15.33 n n n ruditapes_c21215 -1.54 0.232 19.746 12.822 n y n ruditapes_c6626 -1.602 0.232 16.905 10.552 n y n ruditapes_c7384 -1.676 0.232 14.357 8.564 n y n ruditapes_c21580 -2.017 0.232 8.559 4.244 n y n ruditapes_c22303 -2.158 0.232 7.372 3.416 n y n ruditapes_c1010 -2.46 0.232 collagen alpha-2 5.78 2.349 n y n ruditapes2_c1171 -3.069 0.232 paraoxonase 1 /// 0005856 // cytoskeleton /// 0005543 // phospholipid binding /// 0034445 // negative regulation of plasma lipoprotein oxidation /// 0005737 // cytoplasm /// 0046434 // organophosphate catabolic process /// 0046395 // carboxylic acid catabolic process /// 0019439 // aromatic compound catabolic process /// 0042803 // protein homodimerization activity 4.207 1.371 n y n ruditapes_lrc24419 -3.074 0.232 4.192 1.364 n y n ruditapes2_c4471 -3.78 0.232 serine protease inhibitor 2 3.369 0.891 n y n ruditapes_s34090 -4.448 0.232 2.93 0.659 n y n ruditapes_c8040 -4.799 0.232 2.768 0.577 n y n ruditapes_c9655 -5.645 0.232 2.501 0.443 n y n ruditapes_c12281 -7.227 0.232 2.196 0.304 n y n ruditapes_c540 -11.86 0.232 1.851 0.156 n y n ruditapes_lrc34231 -1.628 0.233 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 15.812 9.711 n y n ruditapes2_c2013 -1.665 0.233 14.679 8.819 n y n ruditapes_lrc8273 -1.888 0.233 10.048 5.323 n y n ruditapes_c17603 -2.224 0.233 6.927 3.115 n y n ruditapes2_lrc4148 -2.333 0.233 6.303 2.702 n y n ruditapes_lrc9709 -2.553 0.233 5.412 2.12 n y n ruditapes2_lrc3577 8.634 0.233 lethal neo18 "/// 0003954 // NADH dehydrogenase activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0005747 // mitochondrial respiratory chain complex I" 0.234 2.024 n y n ruditapes_c9356 -3.924 0.233 3.232 0.824 n y n ruditapes2_c904 -4.096 0.233 ubiquitin-conjugating enzyme e2d 3 (ubc4 5 yeast) isoform cra_a /// 0040007 // growth /// 0002119 // nematode larval development /// 0030509 // BMP signaling pathway /// 0051246 // regulation of protein metabolic process /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0031625 // ubiquitin protein ligase binding /// 0051276 // chromosome organization /// 0048477 // oogenesis /// 0008340 // determination of adult lifespan /// 0007140 // male meiosis /// 0040011 // locomotion /// 0016567 // protein ubiquitination /// 0040035 // hermaphrodite genitalia development /// 0007286 // spermatid development /// 0045676 // regulation of R7 cell differentiation /// 0004842 // ubiquitin-protein ligase activity /// 0007067 // mitosis /// 0009792 // embryonic development ending in birth or egg hatching 3.125 0.763 n y n ruditapes_c22797 -8.061 0.233 2.091 0.259 n y n ruditapes_c18272 -? 0.233 1.423 0 n y n ruditapes_c26354 -? 0.233 1.42 0 n y n ruditapes2_c47 -1.524 0.234 nadh dehydrogenase /// 0022900 // electron transport chain /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I 20.422 13.398 n y n ruditapes_lrc33144 1.777 0.234 guanine nucleotide binding protein (g protein) beta polypeptide 2-like 1 /// 0005080 // protein kinase C binding /// 0007205 // activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding 6.384 11.342 n y n ruditapes_c3467 1.788 0.234 6.215 11.111 n y n ruditapes_c19931 -1.858 0.234 10.445 5.623 n y n ruditapes_c15410 -2.069 0.234 7.999 3.866 n y n ruditapes_c7823 -2.133 0.234 m-phase phosphoprotein 10 "/// 0008380 // RNA splicing /// 0042254 // ribosome biogenesis /// 0005730 // nucleolus /// 0005515 // protein binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0005732 // small nucleolar ribonucleoprotein complex" 7.496 3.515 n y n ruditapes2_lrc5072 5.011 0.234 epididymal secretory protein e1 precursor /// 0006869 // lipid transport /// 0044424 // intracellular part 0.526 2.638 n y n ruditapes_c20131 -2.679 0.234 5.019 1.874 n y n ruditapes_c10055 -2.841 0.234 4.606 1.621 n y n ruditapes_c16698 -4.141 0.234 zinc finger transcription factor 3.073 0.742 n y n ruditapes_lrc32716 -4.27 0.234 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 3.003 0.703 n y n ruditapes_lrc33123 -5.374 0.234 2.551 0.475 n y n ruditapes_c24853 -6.115 0.234 2.37 0.388 n y n ruditapes_c21451 -12.601 0.234 AGAP011396-PA [Anopheles gambiae str. PEST] 1.811 0.144 n y n ruditapes_c17509 -17.049 0.234 1.696 0.099 n y n ruditapes_c17729 -28.909 0.234 1.573 0.054 n y n ruditapes_lrc32822 -1.295 0.235 ribosomal protein s16 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 50.572 39.04 n n n ruditapes2_c4543 1.476 0.235 14.901 21.988 n n n ruditapes_c4741 -1.432 0.235 27.285 19.052 n n n ruditapes_c29978 1.611 0.235 9.609 15.478 n y n ruditapes_c4611 -1.503 0.235 21.667 14.414 n y n ruditapes_c4350 -1.705 0.235 13.414 7.866 n y n ruditapes_c11817 -2.082 0.235 7.864 3.777 n y n ruditapes_c15561 -2.154 0.235 7.309 3.393 n y n ruditapes_c2772 -2.156 0.235 universal stress protein 7.303 3.387 n y n ruditapes2_c3281 -2.714 0.235 egf-like domain-containing protein 4.887 1.801 n y n ruditapes_c29846 -3.113 0.235 4.083 1.311 n y n ruditapes2_c1097 -3.191 0.235 3.974 1.245 n y n ruditapes_c29279 -3.378 0.235 3.713 1.099 n y n ruditapes_c1569 -4.003 0.235 3.15 0.787 n y n ruditapes_lrc7565 -5.189 0.235 2.594 0.5 n y n ruditapes_c26273 -6.004 0.235 2.38 0.396 n y n ruditapes_c17827 -6.065 0.235 2.362 0.39 n y n ruditapes_c11034 -6.329 0.235 2.319 0.366 n y n ruditapes2_c210 -8.086 0.235 GH15575 [Drosophila grimshawi] 2.073 0.256 n y n ruditapes_c9385 -44.475 0.235 1.51 0.034 n y n ruditapes_lrc32731 1.187 0.236 ferritin /// 0046914 // transition metal ion binding 81.174 96.371 n n n ruditapes_lrc27815 1.991 0.236 40s ribosomal protein s2 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005654 // nucleoplasm /// 0048604 // fibroblast growth factor 3 binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0048602 // fibroblast growth factor 1 binding 4.206 8.373 n y n ruditapes_c25401 -1.853 0.236 10.427 5.627 n y n ruditapes_c10022 -1.977 0.236 viral a-type inclusion protein repeat containing protein 8.824 4.464 n y n ruditapes_c33956 -2.306 0.236 thyroid hormone receptor interactor 3 /// 0005488 // binding 6.366 2.761 n y n ruditapes_c29335 -2.316 0.236 6.324 2.73 n y n ruditapes_c7656 -2.397 0.236 sjchgc04924 protein 5.942 2.479 n y n ruditapes_lrc29121 -2.418 0.236 predicted protein [Nematostella vectensis] 5.852 2.42 n y n ruditapes_c9444 -2.773 0.236 pol polyprotein 4.725 1.704 n y n ruditapes_c21974 ? 0.236 0 1.402 n y n ruditapes_c13312 -4.336 0.236 2.944 0.679 n y n ruditapes2_lrc3713 -5.357 0.236 2.534 0.473 n y n ruditapes_c18587 -13.899 0.236 1.75 0.126 n y n ruditapes2_c4408 -1.403 0.237 selenophosphate synthetase isoform 1 30.224 21.54 n n n ruditapes_c31453 -1.438 0.237 26.436 18.378 n n n ruditapes_c11567 -1.722 0.237 12.854 7.464 n y n ruditapes_c16541 -1.875 0.237 PREDICTED: hypothetical protein [Danio rerio] 10.07 5.371 n y n ruditapes_lrc33170 -1.941 0.237 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 9.181 4.73 n y n ruditapes_c16393 -2.022 0.237 8.337 4.124 n y n ruditapes_c9373 -2.037 0.237 8.189 4.02 n y n ruditapes_c21040 3.088 0.237 1.299 4.01 n y n ruditapes_c10734 -2.068 0.237 7.929 3.835 n y n ruditapes_c22050 -2.251 0.237 aconitase mitochondrial /// 0005759 // mitochondrial matrix /// 0006101 // citrate metabolic process /// 0005634 // nucleus /// 0006099 // tricarboxylic acid cycle /// 0003994 // aconitate hydratase activity /// 0005506 // iron ion binding 6.645 2.952 n y n ruditapes_lrc38435 -2.266 0.237 ribosomal protein s5 /// 0006414 // translational elongation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.555 2.893 n y n ruditapes2_c2290 -2.372 0.237 myeloid lymphoid or mixed-lineage leukemia 3 6.031 2.542 n y n ruditapes_c21964 -4.055 0.237 3.088 0.762 n y n ruditapes_c22662 -4.055 0.237 3.088 0.762 n y n ruditapes_c26169 -4.105 0.237 3.058 0.745 n y n ruditapes2_c428 -4.27 0.237 2.957 0.693 n y n ruditapes_c14993 -4.448 0.237 2.871 0.646 n y n ruditapes_lrc30571 -5.337 0.237 2.529 0.474 n y n ruditapes_c13737 -6.158 0.237 2.332 0.379 n y n ruditapes_c6790 -6.671 0.237 2.234 0.335 n y n ruditapes_c16802 -16.678 0.237 1.677 0.101 n y n ruditapes2_lrc4953 -33.357 0.237 mgc89694 protein /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 1.534 0.046 n y n ruditapes_c16374 1.235 0.238 52.706 65.11 n n n ruditapes_c7747 -1.63 0.238 15.438 9.468 n y n ruditapes_c31883 -2.224 0.238 6.778 3.048 n y n ruditapes_lrc21227 -2.292 0.238 6.376 2.782 n y n ruditapes_c26438 -2.437 0.238 cdc14 cell division cycle 14 homolog a ( cerevisiae) /// 0004725 // protein tyrosine phosphatase activity /// 0051301 // cell division /// 0008283 // cell proliferation /// 0008138 // protein tyrosine/serine/threonine phosphatase activity /// 0005634 // nucleus /// 0005515 // protein binding /// 0006470 // protein amino acid dephosphorylation /// 0007049 // cell cycle /// 0005813 // centrosome 5.713 2.344 n y n ruditapes_c3553 -2.573 0.238 5.238 2.036 n y n ruditapes_c13598 -2.83 0.238 4.563 1.612 n y n ruditapes2_lrc2287 -2.869 0.238 thymosin beta-12 4.472 1.559 n y n ruditapes2_c2369 -2.875 0.238 4.453 1.549 n y n ruditapes_lrc14361 -2.946 0.238 4.325 1.468 n y n ruditapes_lrc35353 ? 0.238 nonmuscle myosin heavy chain "/// 0000281 // cytokinesis after mitosis /// 0030424 // axon /// 0001725 // stress fiber /// 0006930 // substrate-bound cell migration, cell extension /// 0021670 // lateral ventricle development /// 0001778 // plasma membrane repair /// 0008283 // cell proliferation /// 0030898 // actin-dependent ATPase activity /// 0016459 // myosin complex /// 0007512 // adult heart development /// 0001701 // in utero embryonic development /// 0030496 // midbody /// 0043531 // ADP binding /// 0005886 // plasma membrane /// 0051015 // actin filament binding /// 0005819 // spindle /// 0001764 // neuron migration /// 0021678 // third ventricle development /// 0030048 // actin filament-based movement /// 0043025 // cell soma /// 0043197 // dendritic spine /// 0060041 // retina development in camera-type eye /// 0021592 // fourth ventricle development /// 0050885 // neuromuscular process controlling balance /// 0005938 // cell cortex /// 0032154 // cleavage furrow /// 0007097 // nuclear migration /// 0007411 // axon guidance /// 0055003 // cardiac myofibril assembly /// 0055015 // ventricular cardiac muscle cell development /// 0021680 // cerebellar Purkinje cell layer development /// 0000146 // microfilament motor activity /// 0031594 // neuromuscular junction /// 0008360 // regulation of cell shape /// 0030426 // growth cone /// 0006887 // exocytosis" 0 1.392 n y n ruditapes_c23387 -3.437 0.238 3.602 1.048 n y n ruditapes_c19637 -3.867 0.238 3.209 0.83 n y n ruditapes2_c1306 -5.877 0.238 2.377 0.404 n y n ruditapes_c21203 -6.115 0.238 2.324 0.38 n y n ruditapes_c5327 -7.042 0.238 glutathione s-transferase domain protein 2.172 0.308 n y n ruditapes_c28023 -12.601 0.238 1.776 0.141 n y n ruditapes2_lrc6496 -15.01 0.238 1.709 0.114 n y n ruditapes_lrc31725 -? 0.238 1.395 0 n y n ruditapes_c24319 -? 0.238 1.393 0 n y n ruditapes2_c493 -1.254 0.239 64.262 51.227 n n n ruditapes2_c2158 -1.352 0.239 37.223 27.524 n n n ruditapes_c16179 -1.56 0.239 18.207 11.671 n y n ruditapes_c3024 -1.579 0.239 17.305 10.96 n y n ruditapes_c17495 -1.608 0.239 16.214 10.085 n y n ruditapes_c15352 -1.624 0.239 15.591 9.603 n y n ruditapes2_c189 -1.775 0.239 11.634 6.555 n y n ruditapes2_c579 -1.88 0.239 9.889 5.259 n y n ruditapes_c19178 -2.009 0.239 8.387 4.174 n y n ruditapes_c31372 -2.05 0.239 7.986 3.896 n y n ruditapes_lrc13124 ? 0.239 0 1.389 n y n ruditapes_c13864 ? 0.239 0 1.388 n y n ruditapes_c29329 ? 0.239 0 1.388 n y n ruditapes_c21722 -6.671 0.239 2.216 0.332 n y n ruditapes_c7036 -35.58 0.239 1.511 0.042 n y n ruditapes2_c3113 -1.395 0.24 b-cell translocation gene 1 /// 0008285 // negative regulation of cell proliferation /// 0042981 // regulation of apoptosis /// 0044238 // primary metabolic process /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0045766 // positive regulation of angiogenesis /// 0048468 // cell development /// 0045603 // positive regulation of endothelial cell differentiation /// 0034960 // cellular biopolymer metabolic process /// 0019899 // enzyme binding 30.897 22.155 n n n ruditapes_c10914 -1.704 0.24 13.141 7.71 n y n ruditapes_c12738 -2.026 0.24 8.175 4.035 n y n ruditapes_c12548 -2.102 0.24 7.547 3.591 n y n ruditapes2_c3504 -2.206 0.24 gm2 ganglioside activator protein /// 0032428 // beta-N-acetylgalactosaminidase activity /// 0005739 // mitochondrion /// 0006689 // ganglioside catabolic process /// 0019915 // lipid storage /// 0005889 // hydrogen:potassium-exchanging ATPase complex /// 0016004 // phospholipase activator activity /// 0051345 // positive regulation of hydrolase activity /// 0005764 // lysosome /// 0009898 // internal side of plasma membrane /// 0009313 // oligosaccharide catabolic process /// 0045179 // apical cortex /// 0050885 // neuromuscular process controlling balance /// 0007611 // learning or memory /// 0006869 // lipid transport /// 0005319 // lipid transporter activity /// 0006944 // membrane fusion 6.827 3.095 n y n ruditapes2_c1714 -2.209 0.24 6.809 3.083 n y n ruditapes_c18779 -2.224 0.24 6.72 3.022 n y n ruditapes2_c2420 13.491 0.24 0.128 1.725 n y n ruditapes_lrc32425 -2.888 0.24 predicted protein [Nematostella vectensis] 4.396 1.522 n y n ruditapes_c10225 -2.929 0.24 loc389203 protein 4.323 1.476 n y n ruditapes_c13531 -3 0.24 4.181 1.394 n y n ruditapes_c25515 ? 0.24 0 1.38 n y n ruditapes2_c1046 -3.404 0.24 ovary-specific c1q-like factor 3.616 1.062 n y n ruditapes_lrc14188 -4.055 0.24 3.048 0.752 n y n ruditapes_c5531 -4.587 0.24 nadh dehydrogenase fe-s protein 4 2.769 0.604 n y n ruditapes_c27752 -13.343 0.24 1.737 0.13 n y n ruditapes2_c2368 -1.461 0.241 24.164 16.545 n n n ruditapes_c28243 -1.627 0.241 15.35 9.434 n y n ruditapes_c5007 -1.918 0.241 9.313 4.857 n y n ruditapes_c24121 3.223 0.241 1.162 3.745 n y n ruditapes_c4370 -2.15 0.241 7.165 3.332 n y n ruditapes_c10511 -2.159 0.241 7.098 3.287 n y n ruditapes_c1611 -2.237 0.241 6.592 2.946 n y n ruditapes_s40134 -2.297 0.241 6.292 2.74 n y n ruditapes_c8596 -2.718 0.241 4.763 1.752 n y n ruditapes_lrc19389 -3.507 0.241 3.494 0.996 n y n ruditapes_c22605 -3.799 0.241 3.229 0.85 n y n ruditapes_c11677 -3.934 0.241 3.117 0.792 n y n ruditapes_c16979 -1.568 0.242 17.637 11.251 n y n ruditapes2_c1351 -1.589 0.242 16.698 10.507 n y n ruditapes_c9020 -1.746 0.242 12.09 6.926 n y n ruditapes_c16272 -1.806 0.242 10.925 6.049 n y n ruditapes_c17650 -1.857 0.242 10.102 5.44 n y n ruditapes_c26052 3.148 0.242 1.217 3.832 n y n ruditapes_lrc36529 3.276 0.242 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 1.122 3.675 n y n ruditapes_c24080 -2.315 0.242 6.17 2.666 n y n ruditapes2_c1228 -2.394 0.242 5.796 2.421 n y n ruditapes_lrc16595 -2.458 0.242 5.554 2.26 n y n ruditapes_lrc38609 8.094 0.242 nadh dehydrogenase 1 alpha 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 0.246 1.994 n y n ruditapes_c11417 -3.086 0.242 4.012 1.3 n y n ruditapes_c27463 -3.185 0.242 3.857 1.211 n y n ruditapes_c20139 -3.367 0.242 3.617 1.074 n y n ruditapes_c35062 -4.386 0.242 mitochondrial ribosomal protein l36 2.842 0.648 n y n ruditapes_c18296 -8.26 0.242 1.994 0.241 n y n ruditapes_c30702 -? 0.242 1.37 0 n y n ruditapes_c9617 -1.555 0.243 18.105 11.645 n y n ruditapes_c27063 -1.697 0.243 13.135 7.738 n y n ruditapes_c21377 -1.699 0.243 13.107 7.713 n y n ruditapes_c19985 -1.728 0.243 12.425 7.189 n y n ruditapes_c945 -1.946 0.243 calcium binding protein 1 8.889 4.568 n y n ruditapes_c7706 -1.967 0.243 8.667 4.407 n y n ruditapes_c16750 -2.003 0.243 8.305 4.147 n y n ruditapes_c15041 -2.022 0.243 8.12 4.017 n y n ruditapes_c24906 -2.151 0.243 hepsin /// 0005886 // plasma membrane /// 0016787 // hydrolase activity 7.096 3.299 n y n ruditapes2_c2322 -2.224 0.243 6.627 2.98 n y n ruditapes_c25272 -2.436 0.243 hypothetical protein TRIADDRAFT_55968 [Trichoplax adhaerens] 5.6 2.299 n y n ruditapes_c25755 -2.983 0.243 4.169 1.397 n y n ruditapes_c15003 -3.437 0.243 3.524 1.025 n y n ruditapes_c3257 -3.475 0.243 3.486 1.003 n y n ruditapes2_c1153 -4.2 0.243 2.924 0.696 n y n ruditapes_c6240 -6.486 0.243 2.208 0.34 n y n ruditapes_c20312 -9.785 0.243 1.867 0.191 n y n ruditapes_c23072 -? 0.243 1.362 0 n y n ruditapes_c8282 -1.216 0.244 84.206 69.246 n n n ruditapes_c13204 -1.39 0.244 30.881 22.213 n n n ruditapes_c12229 4.002 0.244 0.749 2.998 n y n ruditapes_c12928 8.094 0.244 0.244 1.977 n y n ruditapes2_c1600 -2.765 0.244 4.594 1.662 n y n ruditapes2_c6760 ? 0.244 0 1.359 n y n ruditapes_c3707 -1.582 0.245 nucleoside-triphosphate--adenylate kinase /// 0005524 // ATP binding /// 0004017 // adenylate kinase activity /// 0006163 // purine nucleotide metabolic process /// 0005737 // cytoplasm 16.759 10.592 n y n ruditapes2_c660 2.492 0.245 2.097 5.225 n y n ruditapes_c26511 -1.891 0.245 9.483 5.014 n y n ruditapes_c3533 -1.935 0.245 8.959 4.629 n y n ruditapes_s39446 -2.056 0.245 7.742 3.765 n y n ruditapes_c23683 -2.076 0.245 7.593 3.658 n y n ruditapes2_c2376 -2.316 0.245 ribonuclease large subunit 6.087 2.628 n y n ruditapes_c13126 -2.432 0.245 5.581 2.295 n y n ruditapes_c18774 -2.83 0.245 4.419 1.561 n y n ruditapes_c16090 -3.451 0.245 3.479 1.008 n y n ruditapes_c22203 -3.6 0.245 3.335 0.926 n y n ruditapes_lrc21891 -1.565 0.246 17.441 11.146 n y n ruditapes_c7891 -1.788 0.246 11.054 6.183 n y n ruditapes2_c2396 -1.823 0.246 10.455 5.734 n y n ruditapes2_c1882 -1.901 0.246 9.315 4.899 n y n ruditapes2_c5442 3.738 0.246 0.845 3.159 n y n ruditapes_c12943 -2.224 0.246 6.551 2.946 n y n ruditapes_c16009 -2.7 0.246 4.702 1.741 n y n ruditapes_c23349 -3.13 0.246 3.876 1.238 n y n ruditapes_c30644 -3.177 0.246 3.797 1.195 n y n ruditapes_c29124 -4.33 0.246 2.821 0.651 n y n ruditapes_c8041 -12.231 0.246 1.729 0.141 n y n ruditapes_c6692 -1.235 0.247 71.552 57.934 n n n ruditapes2_lrc4825 -1.274 0.247 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 54.5 42.767 n n n ruditapes2_lrc5551 -1.307 0.247 atp synthase lipid-binding mitochondrial precursor (atp synthase proteolipid p1) (atpase protein 9) (atpase subunit c) /// 0016020 // membrane 45.083 34.491 n n n ruditapes_c928 -1.374 0.247 32.527 23.667 n n n ruditapes2_c584 -1.817 0.247 10.488 5.772 n y n ruditapes2_c352 -1.834 0.247 glutathione s-transferase mu /// 0016740 // transferase activity 10.219 5.57 n y n ruditapes2_c2405 2.56 0.247 1.94 4.966 n y n ruditapes_c18678 2.575 0.247 chondroitin sulfate proteoglycan 2 1.905 4.905 n y n ruditapes2_c2356 -2.055 0.247 7.691 3.743 n y n ruditapes_c18991 -2.547 0.247 5.119 2.01 n y n ruditapes_c3351 -2.871 0.247 4.295 1.496 n y n ruditapes_c12661 -3.1 0.247 3.894 1.256 n y n ruditapes_c3915 -4.84 0.247 2.58 0.533 n y n ruditapes2_c2087 -15.566 0.247 1.632 0.105 n y n ruditapes_c30536 -? 0.247 1.341 0 n y n ruditapes_lrc16646 -1.331 0.248 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0006396 // RNA processing /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 39.606 29.757 n n n ruditapes_c13042 1.833 0.248 5.349 9.803 n y n ruditapes_c13575 -1.633 0.248 14.709 9.008 n y n ruditapes_c6600 -1.766 0.248 11.386 6.447 n y n ruditapes_c3539 -1.848 0.248 hypothetical protein [Trypanosoma brucei] 9.968 5.394 n y n ruditapes_c26315 -1.977 0.248 8.393 4.246 n y n ruditapes_c18663 -2.003 0.248 8.125 4.056 n y n ruditapes2_lrc4762 -2.104 0.248 atp synthase beta subunit "/// 0005524 // ATP binding /// 0043499 // eukaryotic cell surface binding /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0001525 // angiogenesis /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0005754 // mitochondrial proton-transporting ATP synthase, catalytic core /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0051453 // regulation of intracellular pH /// 0042288 // MHC class I protein binding /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 7.271 3.456 n y n ruditapes_c31366 4.722 0.248 0.548 2.587 n y n ruditapes2_c2859 -2.323 0.248 5.983 2.575 n y n ruditapes_c15493 -3.918 0.248 3.045 0.777 n y n ruditapes_c27182 -6.115 0.248 2.232 0.365 n y n ruditapes2_c954 -7.783 0.248 1.993 0.256 n y n ruditapes_c9077 -9.848 0.248 tar rna binding protein 1 1.829 0.186 n y n ruditapes2_lrc4158 -20.014 0.248 mgc89694 protein /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 1.555 0.078 n y n ruditapes_lrc21862 -? 0.248 1.335 0 n y n ruditapes_c2017 1.411 0.249 18.241 25.745 n n n ruditapes_c27390 -1.539 0.249 18.43 11.976 n y n ruditapes_c13027 -1.741 0.249 11.845 6.803 n y n ruditapes_lrc32109 2.317 0.249 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.509 5.814 n y n ruditapes_c10553 -1.853 0.249 9.853 5.317 n y n ruditapes_c16796 -1.938 0.249 8.772 4.526 n y n ruditapes2_lrc5237 3.738 0.249 calponin homolog 0.834 3.116 n y n ruditapes_s38683 -2.18 0.249 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.728 3.086 n y n ruditapes_c20766 -2.224 0.249 6.457 2.904 n y n ruditapes_c14977 -2.244 0.249 6.345 2.828 n y n ruditapes_lrc27640 -2.669 0.249 4.72 1.769 n y n ruditapes2_c673 -2.78 0.249 4.449 1.601 n y n ruditapes_c28849 -3.113 0.249 3.853 1.238 n y n ruditapes_c26216 -3.558 0.249 3.32 0.933 n y n ruditapes_c20206 -3.867 0.249 3.068 0.793 n y n ruditapes_lrc32587 -3.924 0.249 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 3.02 0.769 n y n ruditapes_c19977 -4.924 0.249 2.53 0.514 n y n ruditapes_c26378 -8.895 0.249 1.881 0.211 n y n ruditapes_lrc32430 -14.454 0.249 1.645 0.114 n y n ruditapes_c9836 -16.122 0.249 1.605 0.1 n y n ruditapes_c17184 -1.501 0.25 20.496 13.655 n y n ruditapes2_lrc3413 -1.722 0.25 12.176 7.071 n y n ruditapes_c24727 -1.811 0.25 10.469 5.78 n y n ruditapes_c15128 -2.013 0.25 7.966 3.958 n y n ruditapes_c25956 -2.153 0.25 6.87 3.191 n y n ruditapes_c20713 -2.196 0.25 6.603 3.008 n y n ruditapes_c27211 -2.261 0.25 ribosomal protein 6.236 2.757 n y n ruditapes_s38320 5.396 0.25 0.436 2.352 n y n ruditapes_c16408 -2.83 0.25 hypothetical protein BRAFLDRAFT_121154 [Branchiostoma floridae] 4.323 1.527 n y n ruditapes_c16258 -2.997 0.25 4.016 1.34 n y n ruditapes_c22111 -6.424 0.25 2.154 0.335 n y n ruditapes_c22208 -6.989 0.25 2.068 0.296 n y n ruditapes_c30625 -11.119 0.25 1.743 0.157 n y n ruditapes_c3461 -1.339 0.251 37.491 27.994 n n n ruditapes_c8376 -1.367 0.251 33.043 24.171 n n n ruditapes_c18335 -1.508 0.251 20.009 13.272 n y n ruditapes_lrc35640 -1.519 0.251 nascent polypeptide-associated complex subunit alpha /// 0005388 // calcium-transporting ATPase activity 19.297 12.705 n y n ruditapes_c5082 -1.769 0.251 11.186 6.323 n y n ruditapes_c2371 -1.879 0.251 serine hydroxymethyltransferase isoform 2 /// 0004372 // glycine hydroxymethyltransferase activity /// 0044237 // cellular metabolic process /// 0005634 // nucleus /// 0005829 // cytosol 9.435 5.022 n y n ruditapes_c8919 -1.883 0.251 9.365 4.973 n y n ruditapes_c17234 -1.957 0.251 8.49 4.337 n y n ruditapes_c5984 -2.068 0.251 7.468 3.611 n y n ruditapes2_c2998 -2.132 0.251 6.977 3.273 n y n ruditapes2_c1974 -2.289 0.251 6.06 2.647 n y n ruditapes_c30446 -2.343 0.251 5.817 2.483 n y n ruditapes_lrc25992 5.151 0.251 60s ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.467 2.406 n y n ruditapes_c21327 -2.393 0.251 5.6 2.34 n y n ruditapes_c9542 6.97 0.251 0.294 2.048 n y n ruditapes_c31117 -2.698 0.251 4.604 1.706 n y n ruditapes_c19638 -2.718 0.251 4.569 1.681 n y n ruditapes_c31050 ? 0.251 0 1.32 n y n ruditapes_c10156 -3.235 0.251 3.645 1.127 n y n ruditapes2_c6758 -6.949 0.251 2.066 0.297 n y n ruditapes_c8247 -1.629 0.252 14.615 8.974 n y n ruditapes_c5215 -1.738 0.252 26s protease regulatory subunit 6b "/// 0005524 // ATP binding /// 0008540 // proteasome regulatory particle, base subcomplex /// 0016887 // ATPase activity /// 0005634 // nucleus /// 0006508 // proteolysis /// 0005515 // protein binding /// 0030163 // protein catabolic process /// 0005737 // cytoplasm /// 0006457 // protein folding /// 0004175 // endopeptidase activity" 11.761 6.767 n y n ruditapes_lrc11459 -1.761 0.252 11.266 6.397 n y n ruditapes2_c1459 -1.822 0.252 10.219 5.609 n y n ruditapes_c10889 -1.904 0.252 9.042 4.748 n y n ruditapes_c28754 -2.242 0.252 6.28 2.801 n y n ruditapes_c12035 -2.58 0.252 4.927 1.91 n y n ruditapes_c24986 -2.66 0.252 4.688 1.763 n y n ruditapes2_c1493 -2.737 0.252 4.501 1.644 n y n ruditapes_c9510 -2.872 0.252 4.201 1.463 n y n ruditapes_c16386 -3.013 0.252 3.958 1.314 n y n ruditapes_lrc35032 -3.592 0.252 acyl carrier mitochondrial precursor /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 3.243 0.903 n y n ruditapes_c8690 -3.753 0.252 zinc hit type 1 /// 0046872 // metal ion binding /// 0005515 // protein binding 3.119 0.831 n y n ruditapes_c17703 -3.867 0.252 3.026 0.782 n y n ruditapes_c29399 -5.683 0.252 2.279 0.401 n y n ruditapes_c12634 -1.35 0.253 35.405 26.23 n n n ruditapes_c23382 -1.497 0.253 20.405 13.629 n n n ruditapes_c12079 -1.591 0.253 15.864 9.973 n y n ruditapes_c14174 1.907 0.253 4.522 8.623 n y n ruditapes_c25615 -1.999 0.253 death-associated protein 7.995 3.999 n y n ruditapes_c30373 -2.014 0.253 7.854 3.899 n y n ruditapes2_c2377 -2.242 0.253 6.253 2.788 n y n ruditapes_c11113 -2.303 0.253 mitochondrial ribosomal protein l55 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0043232 // intracellular non-membrane-bounded organelle 5.947 2.582 n y n ruditapes_c28434 -2.557 0.253 4.955 1.938 n y n ruditapes_c11287 -2.885 0.253 4.174 1.447 n y n ruditapes_c19950 -3.336 0.253 3.495 1.048 n y n ruditapes_c25802 -4.317 0.253 protein 2.739 0.635 n y n ruditapes_lrc34641 -4.336 0.253 mitochondrial ribosomal protein s18a /// 0005840 // ribosome 2.739 0.632 n y n ruditapes_c23380 -5.189 0.253 2.408 0.464 n y n ruditapes_s39956 -9.451 0.253 1.816 0.192 n y n ruditapes_c13948 -21.126 0.253 1.512 0.072 n y n ruditapes_c13372 -? 0.253 1.307 0 n y n ruditapes_c15008 -? 0.253 1.304 0 n y n ruditapes_lrc30594 -1.113 0.254 qm-like protein /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 272.628 244.907 n n n ruditapes2_c1040 -1.32 0.254 40.807 30.907 n n n ruditapes_c31402 -1.458 0.254 23.077 15.827 n n n ruditapes_c31384 -1.533 0.254 18.308 11.939 n y n ruditapes_c24379 -1.656 0.254 13.677 8.261 n y n ruditapes_c17270 -1.682 0.254 12.926 7.686 n y n ruditapes2_c1330 -1.717 0.254 notch gene homolog 1 /// 0009888 // tissue development /// 0035107 // appendage morphogenesis /// 0016043 // cellular component organization /// 0044238 // primary metabolic process /// 0005488 // binding /// 0048522 // positive regulation of cellular process /// 0010467 // gene expression /// 0050767 // regulation of neurogenesis /// 0030182 // neuron differentiation /// 0044464 // cell part /// 0045596 // negative regulation of cell differentiation /// 0045165 // cell fate commitment /// 0003002 // regionalization /// 0034960 // cellular biopolymer metabolic process /// 0009887 // organ morphogenesis 12.096 7.045 n y n ruditapes_c15865 -1.766 0.254 c-jun protein /// 0008285 // negative regulation of cell proliferation /// 0003700 // transcription factor activity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0042493 // response to drug /// 0051726 // regulation of cell cycle /// 0008013 // beta-catenin binding /// 0005667 // transcription factor complex /// 0046686 // response to cadmium ion /// 0051597 // response to methylmercury /// 0031953 // negative regulation of protein amino acid autophosphorylation /// 0035026 // leading edge cell differentiation /// 0060070 // Wnt receptor signaling pathway through beta-catenin 11.066 6.266 n y n ruditapes_c13409 -1.811 0.254 10.277 5.673 n y n ruditapes_c3067 -1.924 0.254 sarcoplasmic calcium-binding protein 8.75 4.549 n y n ruditapes_c27793 -2.8 0.254 4.318 1.542 n y n ruditapes2_lrc5568 -3.102 0.254 predicted protein [Nematostella vectensis] 3.792 1.223 n y n ruditapes_c14794 -3.908 0.254 2.978 0.762 n y n ruditapes_c12689 -4.096 0.254 2.85 0.696 n y n ruditapes_c23932 -4.324 0.254 chromosome 6 open reading frame 168 2.728 0.631 n y n ruditapes_c19156 -5.458 0.254 2.322 0.425 n y n ruditapes_c19677 -8.154 0.254 1.9 0.233 n y n ruditapes_lrc32032 -12.231 0.254 1.674 0.137 n y n ruditapes_c21773 -14.825 0.254 1.601 0.108 n y n ruditapes_c4412 -1.621 0.255 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 14.634 9.026 n y n ruditapes_c13774 2.283 0.255 2.544 5.807 n y n ruditapes_lrc8685 -1.837 0.255 9.852 5.362 n y n ruditapes_c11604 -1.875 0.255 9.3 4.959 n y n ruditapes_c23576 2.773 0.255 coiled-coil and c2 domain containing 2a 1.537 4.263 n y n ruditapes_c11478 -2.2 0.255 6.438 2.926 n y n ruditapes_c8379 3.927 0.255 0.74 2.908 n y n ruditapes_c19982 ? 0.255 0 1.297 n y n ruditapes_c25622 ? 0.255 heat shock 70kd protein 12b 0 1.295 n y n ruditapes2_c2450 -3.1 0.255 3.778 1.219 n y n ruditapes_c28494 -3.235 0.255 3.588 1.109 n y n ruditapes_c10208 -3.507 0.255 3.289 0.938 n y n ruditapes_lrc35679 -8.895 0.255 1.839 0.207 n y n ruditapes2_c3082 -9.266 0.255 1.811 0.195 n y n ruditapes_c9279 -12.231 0.255 1.664 0.136 n y n ruditapes_c9684 -1.695 0.256 12.499 7.375 n y n ruditapes_lrc20187 -1.704 0.256 12.293 7.216 n y n ruditapes_c20083 2.532 0.256 1.912 4.843 n y n ruditapes_c17320 -2.082 0.256 7.201 3.459 n y n ruditapes_c24554 -2.175 0.256 6.551 3.012 n y n ruditapes2_lrc4378 -2.358 0.256 cellular retinoic acid binding protein 5.609 2.379 n y n ruditapes2_c4868 -2.93 0.256 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0019674 // NAD metabolic process /// 0006107 // oxaloacetate metabolic process /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0004470 // malic enzyme activity 4.039 1.379 n y n ruditapes_c22022 -3.494 0.256 trafficking protein particle complex 2 "/// 0006355 // regulation of transcription, DNA-dependent /// 0006810 // transport /// 0005794 // Golgi apparatus /// 0008134 // transcription factor binding" 3.289 0.941 n y n ruditapes_c17778 -21.126 0.256 1.493 0.071 n y n ruditapes_c30968 -? 0.256 1.293 0 n y n ruditapes2_lrc5109 -1.176 0.257 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 115.722 98.429 n n n ruditapes_c4241 -1.451 0.257 23.293 16.055 n n n ruditapes_c2840 -1.695 0.257 12.467 7.354 n y n ruditapes_lrc14076 2.811 0.257 1.479 4.156 n y n ruditapes_c20743 -1.978 0.257 8.051 4.07 n y n ruditapes_c1760 3.027 0.257 1.246 3.773 n y n ruditapes_c7463 -2.06 0.257 sjchgc05363 protein 7.333 3.56 n y n ruditapes_c8437 -2.26 0.257 class member 1 6.055 2.68 n y n ruditapes_c16253 -2.289 0.257 5.9 2.578 n y n ruditapes_c10612 -2.4 0.257 xpa-binding protein 1 /// 0007264 // small GTPase mediated signal transduction /// 0005524 // ATP binding /// 0005525 // GTP binding /// 0017111 // nucleoside-triphosphatase activity 5.433 2.264 n y n ruditapes_lrc14758 -3.426 0.257 serine proteinase 3.342 0.976 n y n ruditapes_c30118 -3.511 0.257 3.255 0.927 n y n ruditapes_c6059 -8.339 0.257 btg2 protein (ngf-inducible anti-proliferative protein pc3) 1.868 0.224 n y n ruditapes_c5712 1.198 0.258 66.526 79.718 n n n ruditapes_c8712 -1.3 0.258 44.834 34.491 n n n ruditapes_c1131 -1.308 0.258 42.919 32.816 n n n ruditapes_c12009 -1.378 0.258 30.644 22.238 n n n ruditapes_c15323 -1.394 0.258 28.6 20.514 n n n ruditapes_lrc31968 1.813 0.258 5.334 9.67 n y n ruditapes2_c1093 -1.687 0.258 12.614 7.479 n y n ruditapes_c14277 -1.804 0.258 10.238 5.674 n y n ruditapes_c11483 -1.847 0.258 9.563 5.178 n y n ruditapes_lrc38459 3.073 0.258 myc homolog 1.198 3.683 n y n ruditapes_c11834 -2.37 0.258 5.527 2.332 n y n ruditapes2_c5277 -2.624 0.258 ribosomal protein s15 /// 0005840 // ribosome 4.675 1.782 n y n ruditapes_c26018 -2.656 0.258 uncharacterized protein partial 4.581 1.725 n y n ruditapes_c11663 -2.985 0.258 3.904 1.308 n y n ruditapes_c10849 -3.177 0.258 3.618 1.139 n y n ruditapes_lrc37045 -3.283 0.258 3.486 1.062 n y n ruditapes_c28682 -3.447 0.258 3.302 0.958 n y n ruditapes_c27799 -3.558 0.258 3.196 0.898 n y n ruditapes_c7555 -3.674 0.258 3.101 0.844 n y n ruditapes_c8149 -10.007 0.258 1.739 0.174 n y n ruditapes_c31964 -? 0.258 1.278 0 n y n ruditapes2_c3846 1.592 0.259 protein 9.16 14.582 n y n ruditapes2_c989 -1.495 0.259 20.031 13.398 n n n ruditapes2_c77 -1.647 0.259 mitochondrial nadh:ubiquinone oxidoreductase esss 13.639 8.283 n y n ruditapes2_c3508 -1.776 0.259 proteasome 26s subunit subunit 4 atpase /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005829 // cytosol 10.684 6.016 n y n ruditapes_c7498 -1.8 0.259 10.247 5.692 n y n ruditapes_c17159 -1.806 0.259 10.138 5.612 n y n ruditapes_c20442 -1.993 0.259 7.852 3.94 n y n ruditapes_lrc20419 -2.094 0.259 7.012 3.348 n y n ruditapes_c4148 -2.251 0.259 6.055 2.691 n y n ruditapes_lrc27213 7.944 0.259 0.236 1.873 n y n ruditapes2_c2326 ? 0.259 isoform b 0 1.274 n y n ruditapes_c4365 -3.169 0.259 3.613 1.14 n y n ruditapes_c11503 -3.336 0.259 3.402 1.02 n y n ruditapes_c16113 -3.859 0.259 2.942 0.762 n y n ruditapes_c9219 -4.031 0.259 2.83 0.702 n y n ruditapes_c28370 -4.765 0.259 2.48 0.52 n y n ruditapes_c23008 -5.115 0.259 2.365 0.462 n y n ruditapes_c30964 -5.189 0.259 2.345 0.452 n y n ruditapes_c4385 -5.401 0.259 2.288 0.424 n y n ruditapes_c27702 -5.661 0.259 2.219 0.392 n y n ruditapes_c3276 -6.671 0.259 2.034 0.305 n y n ruditapes_c21830 -? 0.259 1.273 0 n y n ruditapes_lrc32768 1.218 0.26 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 55.201 67.261 n n n ruditapes2_c2307 -1.538 0.26 17.666 11.486 n y n ruditapes_c4714 -1.697 0.26 12.279 7.236 n y n ruditapes_c20519 -1.756 0.26 10.983 6.253 n y n ruditapes_c2023 -2.019 0.26 7.599 3.764 n y n ruditapes2_c1095 -2.764 0.26 4.3 1.556 n y n ruditapes_lrc33023 -2.924 0.26 3.975 1.36 n y n ruditapes_c30814 -10.563 0.26 1.699 0.161 n y n ruditapes_lrc34476 -12.787 0.26 1.615 0.126 n y n ruditapes_c21680 1.758 0.261 5.921 10.408 n y n ruditapes_lrc33262 -1.66 0.261 eukaryotic translation initiation factor 3 subunit 3 /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0005829 // cytosol /// 0005792 // microsome 13.167 7.933 n y n ruditapes_c12601 -1.779 0.261 10.544 5.927 n y n ruditapes_c12028 -1.892 0.261 8.868 4.687 n y n ruditapes_lrc21553 -2.196 0.261 6.298 2.868 n y n ruditapes_c18729 -2.45 0.261 5.15 2.102 n y n ruditapes_c10173 -2.687 0.261 4.458 1.659 n y n ruditapes2_c602 -4.765 0.261 2.458 0.516 n y n ruditapes_s39760 -8.45 0.261 1.826 0.216 n y n ruditapes_c11500 -11.119 0.261 1.667 0.15 n y n ruditapes2_c293 -1.312 0.262 41.191 31.392 n n n ruditapes_c16873 -1.471 0.262 21.393 14.547 n n n ruditapes_c31462 -1.48 0.262 20.796 14.055 n n n ruditapes_lrc19482 -1.506 0.262 19.135 12.707 n y n ruditapes_c30083 -1.533 0.262 17.727 11.567 n y n ruditapes_c12422 -1.601 0.262 caseinolytic peptidase x ( ) /// 0005524 // ATP binding /// 0004176 // ATP-dependent peptidase activity /// 0009841 // mitochondrial endopeptidase Clp complex /// 0005515 // protein binding /// 0016504 // peptidase activator activity /// 0042645 // mitochondrial nucleoid /// 0005743 // mitochondrial inner membrane /// 0051603 // proteolysis involved in cellular protein catabolic process 14.883 9.294 n y n ruditapes2_c3064 -1.612 0.262 14.54 9.023 n y n ruditapes_lrc32277 -1.619 0.262 ependymin precursor 14.283 8.823 n y n ruditapes_c24516 -1.689 0.262 12.316 7.291 n y n ruditapes_c16416 -1.824 0.262 9.772 5.357 n y n ruditapes_c2138 -1.826 0.262 9.715 5.322 n y n ruditapes_c23258 -1.935 0.262 8.315 4.297 n y n ruditapes_c13406 2.805 0.262 1.451 4.071 n y n ruditapes_c12436 3.485 0.262 0.906 3.157 n y n ruditapes_c23691 -2.357 0.262 5.479 2.325 n y n ruditapes_c4758 5.471 0.262 0.405 2.216 n y n ruditapes2_c4364 -2.439 0.262 hypothetical protein TRIADDRAFT_55163 [Trichoplax adhaerens] 5.174 2.122 n y n ruditapes_c31118 -2.879 0.262 4.018 1.395 n y n ruditapes_c30120 -2.965 0.262 3.867 1.304 n y n ruditapes_c25397 -2.986 0.262 3.835 1.284 n y n ruditapes_s38921 -3.009 0.262 3.802 1.264 n y n ruditapes_c26763 -3.113 0.262 3.644 1.171 n y n ruditapes_c2127 -3.133 0.262 3.61 1.152 n y n ruditapes_c29332 -3.27 0.262 subfamily member 2 /// 0000085 // G2 phase of mitotic cell cycle /// 0005515 // protein binding /// 0030308 // negative regulation of cell growth /// 0006260 // DNA replication 3.436 1.051 n y n ruditapes_c29614 -3.277 0.262 3.431 1.047 n y n ruditapes_c13676 -3.628 0.262 3.088 0.851 n y n ruditapes_c14608 -8.895 0.262 1.78 0.2 n y n ruditapes_s39579 -16.678 0.262 1.514 0.091 n y n ruditapes_c14871 -? 0.262 1.26 0 n y n ruditapes_c32012 -? 0.262 1.259 0 n y n ruditapes2_c1370 -1.253 0.263 coactosin-like 1 58.95 47.061 n n n ruditapes2_c396 -1.331 0.263 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 37.172 27.925 n n n ruditapes_c7828 -1.359 0.263 na+ k+ atpase alpha subunit "/// 0007275 // multicellular organismal development /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances /// 0016020 // membrane /// 0008324 // cation transmembrane transporter activity /// 0065008 // regulation of biological quality /// 0006812 // cation transport /// 0009987 // cellular process" 32.518 23.925 n n n ruditapes_c23457 -1.402 0.263 27.236 19.43 n n n ruditapes_c26672 -1.563 0.263 16.295 10.423 n y n ruditapes_c28625 1.897 0.263 4.411 8.369 n y n ruditapes_lrc34243 -1.919 0.263 ribosomal protein l4 /// 0005622 // intracellular 8.477 4.417 n y n ruditapes2_c3336 -1.981 0.263 cytochrome oxidase subunit 1 /// 0044464 // cell part 7.841 3.958 n y n ruditapes_s39527 -2.316 0.263 5.623 2.428 n y n ruditapes_c19019 -2.421 0.263 5.219 2.156 n y n ruditapes_c18531 -2.885 0.263 3.993 1.384 n y n ruditapes2_c4777 -3.25 0.263 chondroitin sulfate proteoglycan 3 3.453 1.063 n y n ruditapes_c20818 -4.448 0.263 2.573 0.578 n y n ruditapes_c18734 -5.003 0.263 reverse transcriptase 2.364 0.472 n y n ruditapes2_c2259 -8.895 0.263 1.773 0.199 n y n ruditapes_lrc15877 -11.119 0.263 1.65 0.148 n y n ruditapes2_c2648 -25.573 0.263 1.414 0.055 n y n ruditapes_lrc19716 -? 0.263 1.255 0 n y n ruditapes_c1201 -1.533 0.264 17.545 11.442 n y n ruditapes_c25652 -1.578 0.264 15.651 9.917 n y n ruditapes_c6356 -1.879 0.264 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 8.923 4.748 n y n ruditapes_c7324 -2.058 0.264 7.125 3.462 n y n ruditapes_c8677 3.548 0.264 hypothetical protein IscW_ISCW024401 [Ixodes scapularis] 0.867 3.077 n y n ruditapes_lrc33547 -2.224 0.264 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.059 2.725 n y n ruditapes_lrc22210 4.197 0.264 0.63 2.642 n y n ruditapes_c11493 -2.252 0.264 5.923 2.63 n y n ruditapes2_c1824 -2.272 0.264 ngdn protein 5.811 2.558 n y n ruditapes_c25049 -2.707 0.264 4.347 1.606 n y n ruditapes_c29963 ? 0.264 nin one binding protein /// 0005515 // protein binding 0 1.248 n y n ruditapes2_c2692 -6.671 0.264 1.995 0.299 n y n ruditapes_s33426 -6.671 0.264 60s ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.992 0.299 n y n ruditapes_c16380 -8.895 0.264 1.769 0.199 n y n ruditapes_lrc21988 -10.007 0.264 1.696 0.169 n y n ruditapes_c17653 -15.566 0.264 1.517 0.097 n y n ruditapes_lrc38520 1.138 0.265 tubulin alpha-1 chain "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 125.462 142.829 n n n ruditapes_c16692 -1.385 0.265 28.846 20.832 n n n ruditapes_c10381 -1.424 0.265 24.726 17.359 n n n ruditapes_c2489 -1.604 0.265 14.643 9.128 n y n ruditapes_c7056 -1.759 0.265 10.693 6.08 n y n ruditapes_c35044 -1.782 0.265 10.287 5.773 n y n ruditapes_c20645 -1.81 0.265 9.845 5.439 n y n ruditapes_c19130 -1.834 0.265 9.462 5.159 n y n ruditapes_c17215 -1.955 0.265 8.032 4.108 n y n ruditapes_c11399 -2.01 0.265 7.495 3.729 n y n ruditapes_c7455 -2.051 0.265 7.158 3.49 n y n ruditapes_lrc39139 -2.256 0.265 ribosomal protein l8e /// 0044424 // intracellular part /// 0007052 // mitotic spindle organization 5.88 2.606 n y n ruditapes_c9346 -2.415 0.265 5.185 2.146 n y n ruditapes_c11690 26.981 0.265 mediator complex subunit 11 cg6884-pa "/// 0006355 // regulation of transcription, DNA-dependent /// 0048813 // dendrite morphogenesis /// 0016455 // RNA polymerase II transcription mediator activity /// 0007517 // muscle organ development" 0.051 1.387 n y n ruditapes_c31236 ? 0.265 0 1.241 n y n ruditapes_c6318 -4.003 0.265 2.784 0.695 n y n ruditapes_c31374 -7.227 0.265 1.91 0.264 n y n ruditapes2_c1079 1.17 0.266 heterogeneous nuclear ribonucleoprotein 85.873 100.438 n n n ruditapes2_c2431 -1.235 0.266 65.958 53.414 n n n ruditapes_c2107 1.353 0.266 22.39 30.288 n n n ruditapes_c12840 -1.424 0.266 24.697 17.346 n n n ruditapes2_c229 -1.44 0.266 nadh dehydrogenase fe-s protein 3 /// 0006810 // transport /// 0022900 // electron transport chain /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005747 // mitochondrial respiratory chain complex I /// 0006917 // induction of apoptosis /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0030308 // negative regulation of cell growth 23.305 16.183 n n n ruditapes_c25886 -1.461 0.266 21.683 14.844 n n n ruditapes2_lrc4315 -1.523 0.266 17.905 11.757 n y n ruditapes_c13381 -1.732 0.266 11.196 6.462 n y n ruditapes_c22834 2.455 0.266 1.997 4.901 n y n ruditapes_c9329 -1.95 0.266 8.022 4.114 n y n ruditapes2_c2587 2.811 0.266 1.425 4.004 n y n ruditapes_s40402 -2.224 0.266 6.027 2.71 n y n ruditapes_c10905 -2.253 0.266 5.853 2.597 n y n ruditapes2_c3069 -2.284 0.266 5.722 2.506 n y n ruditapes_c15651 -2.7 0.266 4.318 1.599 n y n ruditapes2_lrc5057 21.585 0.266 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 0.066 1.422 n y n ruditapes_c19859 -2.919 0.266 2410001c21rik protein 3.881 1.33 n y n ruditapes_c31755 -3.25 0.266 3.405 1.048 n y n ruditapes_c12752 -4.309 0.266 hypothetical protein BRAFLDRAFT_130685 [Branchiostoma floridae] 2.601 0.604 n y n ruditapes_c25611 -? 0.266 1.237 0 n y n ruditapes_c1609 -1.153 0.267 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 144.041 124.93 n n n ruditapes_c8867 -1.527 0.267 17.67 11.57 n y n ruditapes2_c123 -1.574 0.267 15.556 9.881 n y n ruditapes_c8250 -1.776 0.267 10.293 5.794 n y n ruditapes2_c645 -1.807 0.267 metaxin 2 /// 0006810 // transport /// 0044464 // cell part 9.818 5.432 n y n ruditapes_c24354 -1.899 0.267 novel protein 8.546 4.499 n y n ruditapes_c16681 -1.958 0.267 7.911 4.04 n y n ruditapes2_c2750 -1.979 0.267 7.721 3.901 n y n ruditapes_c26118 -2.111 0.267 6.67 3.16 n y n ruditapes2_c1965 -2.122 0.267 6.604 3.113 n y n ruditapes_lrc10629 -2.282 0.267 5.706 2.501 n y n ruditapes_c19770 -3.521 0.267 3.114 0.884 n y n ruditapes_c23969 -4.448 0.267 2.531 0.569 n y n ruditapes_c2652 -8.895 0.267 1.743 0.196 n y n ruditapes_c8969 -18.902 0.267 1.449 0.077 n y n ruditapes_c14972 -1.477 0.268 20.459 13.854 n n n ruditapes_lrc8827 -1.562 0.268 16.014 10.254 n y n ruditapes_c31465 -1.625 0.268 13.781 8.48 n y n ruditapes_c9284 -1.683 0.268 12.154 7.221 n y n ruditapes2_c3011 -1.859 0.268 scan domain containing 3 9.009 4.846 n y n ruditapes_c25363 -2.038 0.268 7.177 3.521 n y n ruditapes_lrc36182 -2.333 0.268 5.454 2.338 n y n ruditapes2_c3672 5.346 0.268 peripheral-type benzodiazepine receptor /// 0005739 // mitochondrion /// 0006811 // ion transport /// 0008503 // benzodiazepine receptor activity 0.41 2.192 n y n ruditapes_c30590 -2.8 0.268 4.075 1.455 n y n ruditapes_c13603 -2.991 0.268 chromosome 5 open reading frame 22 "/// 0046872 // metal ion binding /// 0016813 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines" 3.739 1.25 n y n ruditapes_c9330 -3.002 0.268 3.711 1.236 n y n ruditapes_c8846 ? 0.268 0 1.228 n y n ruditapes_c24017 -3.706 0.268 2.95 0.796 n y n ruditapes_c14938 -6.949 0.268 1.921 0.276 n y n ruditapes_c14123 -8.061 0.268 1.803 0.224 n y n ruditapes_c22079 -8.895 0.268 1.739 0.196 n y n ruditapes_c15172 -9.451 0.268 1.702 0.18 n y n ruditapes_c23882 -13.343 0.268 c-type superfamily member 14 /// 0005488 // binding /// 0016020 // membrane 1.544 0.116 n y n ruditapes2_c233 -1.28 0.269 48.047 37.542 n n n ruditapes_c28650 -1.318 0.269 38.669 29.335 n n n ruditapes2_c979 1.422 0.269 16.003 22.75 n n n ruditapes_c6403 -1.38 0.269 28.954 20.98 n n n ruditapes_c1852 -1.485 0.269 19.83 13.354 n n n ruditapes_c13758 -1.529 0.269 17.401 11.377 n y n ruditapes2_c1961 1.761 0.269 5.696 10.032 n y n ruditapes_c1997 -1.584 0.269 thymosin isoform 2 /// 0003785 // actin monomer binding /// 0035193 // larval central nervous system remodeling /// 0005829 // cytosol 15.117 9.544 n y n ruditapes_c19294 -1.597 0.269 14.614 9.149 n y n ruditapes_c8252 -1.733 0.269 11.036 6.369 n y n ruditapes_lrc33557 -1.849 0.269 eukaryotic translation initiation factor 3 subunit 3 gamma /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0032403 // protein complex binding /// 0005829 // cytosol /// 0005792 // microsome 9.112 4.927 n y n ruditapes2_c2443 -1.86 0.269 8.955 4.815 n y n ruditapes_c12485 -2.006 0.269 7.423 3.701 n y n ruditapes_c19336 -2.049 0.269 7.055 3.442 n y n ruditapes_c21170 -2.092 0.269 6.734 3.22 n y n ruditapes_c24645 -2.107 0.269 6.627 3.146 n y n ruditapes_c16535 -2.165 0.269 6.278 2.9 n y n ruditapes_c11541 -2.204 0.269 6.039 2.739 n y n ruditapes_c1805 -2.536 0.269 4.702 1.855 n y n ruditapes_c8739 9.893 0.269 0.168 1.66 n y n ruditapes_c7627 -2.835 0.269 3.992 1.408 n y n ruditapes_c31338 -2.859 0.269 3.942 1.379 n y n ruditapes_c11880 -3.421 0.269 3.176 0.928 n y n ruditapes_c26627 -7.783 0.269 1.822 0.234 n y n ruditapes_c10958 -18.902 0.269 1.439 0.076 n y n ruditapes_lrc23197 1.108 0.27 ribosomal protein s26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 192.478 213.309 n n n ruditapes2_c2641 -1.155 0.27 139.389 120.72 n n n ruditapes_c27406 -1.748 0.27 10.7 6.121 n y n ruditapes_c27006 -1.779 0.27 10.13 5.694 n y n ruditapes_c15512 3.553 0.27 0.845 3.001 n y n ruditapes_c23241 -2.182 0.27 6.148 2.817 n y n ruditapes_c19886 -2.287 0.27 hypothetical protein BRAFLDRAFT_97417 [Branchiostoma floridae] 5.596 2.447 n y n ruditapes_lrc38642 -2.55 0.27 4.639 1.819 n y n ruditapes_c2129 12.366 0.27 pi-class glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0008152 // metabolic process 0.126 1.555 n y n ruditapes_c21157 -2.817 0.27 4.004 1.421 n y n ruditapes2_lrc1557 -2.852 0.27 basic transcription factor 3-like 4 3.935 1.38 n y n ruditapes_c24124 -3.583 0.27 3.014 0.841 n y n ruditapes_c508 -4.448 0.27 2.501 0.562 n y n ruditapes_c14731 -4.578 0.27 mgc88975 protein 2.445 0.534 n y n ruditapes_c18152 -6.671 0.27 1.946 0.292 n y n ruditapes_c28037 -11.119 0.27 1.602 0.144 n y n ruditapes2_c872 1.29 0.271 31.32 40.413 n n n ruditapes_c8189 -1.669 0.271 12.373 7.412 n y n ruditapes_c27337 -1.693 0.271 11.814 6.978 n y n ruditapes_c26375 -1.73 0.271 10.985 6.351 n y n ruditapes_lrc33488 2.268 0.271 2.427 5.506 n y n ruditapes_c24346 -1.943 0.271 7.932 4.082 n y n ruditapes2_c755 -2.011 0.271 7.297 3.628 n y n ruditapes_c10554 -2.056 0.271 6.934 3.373 n y n ruditapes2_c5799 -2.204 0.271 ependymin related protein 1 precursor 5.986 2.715 n y n ruditapes_c15816 -2.517 0.271 4.725 1.877 n y n ruditapes_lrc32987 -4.571 0.271 predicted protein [Nematostella vectensis] 2.434 0.532 n y n ruditapes_lrc7517 -4.781 0.271 2.352 0.492 n y n ruditapes_c8370 -5.189 0.271 2.232 0.43 n y n ruditapes_c24128 -6.177 0.271 2.014 0.326 n y n ruditapes_lrc7894 -1.64 0.272 13.121 8.002 n y n ruditapes_lrc27375 -2.037 0.272 7.054 3.463 n y n ruditapes_c8254 -2.081 0.272 6.737 3.237 n y n ruditapes_c23993 -2.1 0.272 6.608 3.146 n y n ruditapes_c13101 -2.137 0.272 6.363 2.977 n y n ruditapes_c24036 -2.274 0.272 5.621 2.472 n y n ruditapes_lrc29012 -2.628 0.272 4.402 1.675 n y n ruditapes_c28194 -3.639 0.272 2.95 0.811 n y n ruditapes_c15275 -18.902 0.272 1.417 0.075 n y n ruditapes_c15941 -? 0.272 1.207 0 n y n ruditapes_c2219 -1.422 0.273 24.151 16.989 n n n ruditapes2_c5209 -1.611 0.273 13.893 8.623 n y n ruditapes_c6521 -1.696 0.273 11.615 6.849 n y n ruditapes_c6622 -1.727 0.273 10.979 6.357 n y n ruditapes_lrc18791 -1.828 0.273 9.259 5.064 n y n ruditapes_c26067 -1.884 0.273 8.514 4.518 n y n ruditapes_c20885 -2.008 0.273 7.279 3.625 n y n ruditapes_c1943 -2.378 0.273 5.154 2.167 n y n ruditapes2_c2061 -2.911 0.273 3.793 1.303 n y n ruditapes_c16572 -2.965 0.273 3.703 1.249 n y n ruditapes_c14047 -3.032 0.273 3.588 1.183 n y n ruditapes_c11284 -3.197 0.273 3.367 1.053 n y n ruditapes_c4961 -3.262 0.273 3.289 1.009 n y n ruditapes_c17736 -3.283 0.273 beta- -endoglucanase /// 0003824 // catalytic activity 3.266 0.995 n y n ruditapes2_c1787 -3.614 0.273 2.957 0.818 n y n ruditapes_lrc35420 -4.892 0.273 calcium-binding ef-hand domain protein 2.297 0.469 n y n ruditapes_c10167 -8.006 0.273 1.772 0.221 n y n ruditapes_c8095 -1.475 0.274 19.971 13.536 n n n ruditapes2_lrc4726 1.601 0.274 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 8.373 13.405 n y n ruditapes_c6781 -1.711 0.274 11.238 6.567 n y n ruditapes_c25459 -1.74 0.274 10.661 6.126 n y n ruditapes_c13314 -1.839 0.274 9.072 4.933 n y n ruditapes_c26496 -2.058 0.274 6.842 3.325 n y n ruditapes_lrc17183 -2.058 0.274 6.837 3.322 n y n ruditapes_c11721 -2.365 0.274 5.18 2.19 n y n ruditapes2_c489 5.332 0.274 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0002119 // nematode larval development /// 0040015 // negative regulation of multicellular organism growth /// 0005515 // protein binding /// 0040011 // locomotion /// 0006730 // one-carbon metabolic process /// 0010171 // body morphogenesis /// 0009792 // embryonic development ending in birth or egg hatching 0.402 2.143 n y n ruditapes_c13260 -2.756 0.274 4.071 1.477 n y n ruditapes_c5080 -2.827 0.274 s-crystallin sl11 (major lens polypeptide) 3.928 1.389 n y n ruditapes2_c4071 ? 0.274 nadh dehydrogenase fe-s protein (nadh-coenzyme q reductase) /// 0022900 // electron transport chain /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I 0 1.198 n y n ruditapes2_c6298 -3.032 0.274 p8 nuclear protein 3.579 1.18 n y n ruditapes_c24190 -4.448 0.274 2.452 0.551 n y n ruditapes_c1083 -9.451 0.274 1.663 0.176 n y n ruditapes_lrc33633 1.747 0.275 arginine kinase /// 0005524 // ATP binding /// 0004054 // arginine kinase activity 5.728 10.004 n y n ruditapes_c14769 1.756 0.275 5.61 9.852 n y n ruditapes_c11736 2.156 0.275 2.774 5.981 n y n ruditapes_lrc13144 -1.819 0.275 9.309 5.116 n y n ruditapes_c31670 -1.939 0.275 7.855 4.052 n y n ruditapes_c26665 -2.074 0.275 6.716 3.239 n y n ruditapes_c15612 -2.143 0.275 6.254 2.919 n y n ruditapes_c12584 -2.326 0.275 5.325 2.29 n y n ruditapes_c1850 -2.363 0.275 5.164 2.186 n y n ruditapes_c22772 -2.406 0.275 5.012 2.083 n y n ruditapes_c1383 -2.431 0.275 4.911 2.021 n y n ruditapes_c10878 -2.559 0.275 leucine aminopeptidase-like protein /// 0030145 // manganese ion binding /// 0006508 // proteolysis /// 0004177 // aminopeptidase activity /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0000287 // magnesium ion binding /// 0008235 // metalloexopeptidase activity 4.525 1.768 n y n ruditapes2_c9 -2.739 0.275 glutathione s-transferase pi /// 0004364 // glutathione transferase activity /// 0005515 // protein binding /// 0008152 // metabolic process /// 0032502 // developmental process 4.087 1.492 n y n ruditapes_c5303 -2.759 0.275 4.04 1.464 n y n ruditapes2_c1226 -2.965 0.275 elongation factor 2 /// 0007275 // multicellular organismal development /// 0000003 // reproduction 3.67 1.238 n y n ruditapes_c14651 -3.064 0.275 3.517 1.148 n y n ruditapes_lrc38358 -3.38 0.275 predicted protein [Nematostella vectensis] 3.141 0.929 n y n ruditapes_c10288 -3.812 0.275 2.789 0.732 n y n ruditapes_c22962 -4.13 0.275 2.597 0.629 n y n ruditapes_s38269 -4.852 0.275 2.29 0.472 n y n ruditapes_c27972 -6.301 0.275 1.958 0.311 n y n ruditapes2_c664 -15.122 0.275 1.462 0.097 n y n ruditapes_c29845 -? 0.275 1.189 0 n y n ruditapes_lrc32974 -1.118 0.276 227.429 203.362 n n n ruditapes_c26179 -1.506 0.276 18.017 11.96 n y n ruditapes_c12301 -1.635 0.276 13.027 7.967 n y n ruditapes2_c2246 -1.812 0.276 9.354 5.162 n y n ruditapes_lrc24394 2.578 0.276 1.682 4.337 n y n ruditapes_c12770 -2.003 0.276 7.235 3.613 n y n ruditapes_c8557 -2.112 0.276 6.416 3.038 n y n ruditapes_c18348 -2.134 0.276 peptidylprolyl isomerase -like 4 6.274 2.941 n y n ruditapes2_c3877 5.036 0.276 peritrophin a 0.437 2.2 n y n ruditapes_c15761 -2.403 0.276 4.999 2.08 n y n ruditapes_c5476 -2.901 0.276 3.76 1.296 n y n ruditapes2_lrc3272 -3.253 0.276 3.265 1.004 n y n ruditapes_s40324 -5.436 0.276 loc567151 protein 2.12 0.39 n y n ruditapes_lrc13208 -6.918 0.276 1.861 0.269 n y n ruditapes_lrc32060 -? 0.276 1.186 0 n y n ruditapes_c9290 -1.621 0.277 13.382 8.256 n y n ruditapes_c19536 -1.645 0.277 12.679 7.708 n y n ruditapes2_c2399 -1.703 0.277 11.293 6.633 n y n ruditapes_c22225 -1.763 0.277 10.111 5.735 n y n ruditapes_c14473 -1.791 0.277 9.648 5.387 n y n ruditapes_c7704 -2.058 0.277 6.768 3.288 n y n ruditapes_c19599 -2.256 0.277 5.594 2.479 n y n ruditapes_c22083 -2.6 0.277 4.376 1.683 n y n ruditapes_c29756 -3.067 0.277 3.479 1.134 n y n ruditapes2_c1022 -3.113 0.277 mitochondrial ribosomal protein s21 /// 0005763 // mitochondrial small ribosomal subunit /// 0006412 // translation /// 0005743 // mitochondrial inner membrane /// 0003735 // structural constituent of ribosome 3.427 1.101 n y n ruditapes_lrc34907 -3.197 0.277 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 3.31 1.035 n y n ruditapes_c3747 -3.494 0.277 3.003 0.859 n y n ruditapes_c11681 -4.892 0.277 2.262 0.462 n y n ruditapes_c23443 -7.561 0.277 1.786 0.236 n y n ruditapes_c19930 -11.675 0.277 1.537 0.132 n y n ruditapes_c27917 -25.573 0.277 atp-dependent lon /// 0016787 // hydrolase activity 1.33 0.052 n y n ruditapes_c11491 -? 0.277 1.182 0 n y n ruditapes2_c438 -1.387 0.278 galactoside- 9 /// 0005529 // sugar binding /// 0004871 // signal transducer activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade 27.08 19.522 n n n ruditapes_c23560 -1.412 0.278 24.537 17.377 n n n ruditapes_c21849 -1.42 0.278 23.83 16.785 n n n ruditapes_c5815 -1.718 0.278 10.928 6.361 n y n ruditapes_c5816 -1.946 0.278 serine threonine-protein partial 7.687 3.951 n y n ruditapes_c15298 -2.131 0.278 6.238 2.927 n y n ruditapes_c14506 -2.375 0.278 5.063 2.131 n y n ruditapes_c24741 -2.682 0.278 conserved hypothetical protein [Ixodes scapularis] 4.16 1.551 n y n ruditapes2_c3490 ? 0.278 protein phosphatase regulatory subunit 0 1.179 n y n ruditapes_c26521 -3.191 0.278 3.313 1.038 n y n ruditapes_c10365 -3.481 0.278 engulfment and cell motility 1 variant 1 3.008 0.864 n y n ruditapes_c22954 -3.515 0.278 2.983 0.849 n y n ruditapes_c31074 -3.953 0.278 2.656 0.672 n y n ruditapes_c27362 -4.105 0.278 cytochrome b 2.571 0.626 n y n ruditapes_c19657 -9.34 0.278 1.64 0.176 n y n ruditapes2_lrc5671 -10.674 0.278 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 1.568 0.147 n y n ruditapes_c19615 -? 0.278 1.177 0 n y n ruditapes2_c1564 -1.234 0.279 atp synthase delta mitochondrial /// 0015078 // hydrogen ion transmembrane transporter activity 63.044 51.09 n n n ruditapes_c929 -1.503 0.279 17.992 11.97 n y n ruditapes_lrc34985 -1.595 0.279 14.088 8.834 n y n ruditapes2_c78 -1.668 0.279 coactosin-like protein 11.99 7.189 n y n ruditapes_c11445 -1.792 0.279 9.553 5.331 n y n ruditapes_c5846 -2.284 0.279 5.418 2.372 n y n ruditapes_c4403 ? 0.279 0 1.17 n y n ruditapes_c15000 -3.647 0.279 2.859 0.784 n y n ruditapes_c10528 -3.745 0.279 2.789 0.745 n y n ruditapes_lrc11295 -3.892 0.279 2.685 0.69 n y n ruditapes_c25744 -5.559 0.279 2.066 0.372 n y n ruditapes_c14887 -7.042 0.279 1.822 0.259 n y n ruditapes_c8232 -? 0.279 1.17 0 n y n ruditapes2_c328 -1.505 0.28 17.807 11.833 n y n ruditapes_c14735 -1.625 0.28 13.133 8.084 n y n ruditapes_c21532 -1.624 0.28 13.106 8.069 n y n ruditapes_c25623 2.33 0.28 2.163 5.041 n y n ruditapes2_c1499 -1.87 0.28 trove domain protein 8.442 4.515 n y n ruditapes_c1888 -1.998 0.28 7.134 3.57 n y n ruditapes_c13035 -2.069 0.28 peptidylprolyl isomerase -like 6 /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 6.605 3.192 n y n ruditapes_c9116 -2.124 0.28 6.235 2.936 n y n ruditapes2_c3095 -2.141 0.28 saposin-like type region 1 family protein 6.122 2.859 n y n ruditapes2_c1627 -2.588 0.28 ankyrin repeat domain 45 4.357 1.683 n y n ruditapes_c20169 -2.794 0.28 3.883 1.39 n y n ruditapes2_c3067 -2.929 0.28 3.652 1.247 n y n ruditapes_c27072 -3.558 0.28 solute carrier family member 1 /// 0006821 // chloride transport /// 0006814 // sodium ion transport /// 0016021 // integral to membrane /// 0015377 // cation:chloride symporter activity 2.922 0.821 n y n ruditapes_c14920 -26.685 0.28 1.307 0.049 n y n ruditapes2_lrc6795 1.294 0.281 40s ribosomal protein s10 29.432 38.07 n n n ruditapes_c39164 -1.424 0.281 23.177 16.271 n n n ruditapes2_c454 -1.577 0.281 14.622 9.272 n y n ruditapes_c26090 -1.914 0.281 7.911 4.134 n y n ruditapes2_lrc3693 -2.272 0.281 5.43 2.39 n y n ruditapes_c1187 -2.315 0.281 5.23 2.259 n y n ruditapes_c7900 -2.458 0.281 4.71 1.916 n y n ruditapes_c16255 -2.599 0.281 nf-kappa-b inhibitor /// 0032502 // developmental process /// 0009987 // cellular process /// 0006955 // immune response 4.312 1.659 n y n ruditapes_c14530 -2.885 0.281 3.704 1.284 n y n ruditapes_c3178 ? 0.281 0 1.165 n y n ruditapes_c17947 -3.979 0.281 cut-like 1 /// 0006810 // transport /// 0007275 // multicellular organismal development /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0003677 // DNA binding /// 0030173 // integral to Golgi membrane /// 0003702 // RNA polymerase II transcription factor activity 2.613 0.657 n y n ruditapes_c26148 -11.119 0.281 1.534 0.138 n y n ruditapes_c7460 -11.119 0.281 1.534 0.138 n y n ruditapes_c32011 -? 0.281 1.162 0 n y n ruditapes_c8701 -1.396 0.282 25.777 18.468 n n n ruditapes_c24093 -1.437 0.282 22.024 15.324 n n n ruditapes_c12430 -1.556 0.282 15.358 9.871 n y n ruditapes_c767 -1.57 0.282 rrna-processing protein fcf1 homolog /// 0006364 // rRNA processing 14.825 9.444 n y n ruditapes2_c267 -1.578 0.282 14.548 9.222 n y n ruditapes_c30869 -1.662 0.282 11.974 7.204 n y n ruditapes_c319 -1.696 0.282 11.209 6.609 n y n ruditapes_c23626 -1.837 0.282 8.779 4.779 n y n ruditapes_c4416 -1.955 0.282 nadh dehydrogenase iron-sulfur protein 5 7.476 3.824 n y n ruditapes_lrc8181 -2.071 0.282 6.52 3.147 n y n ruditapes_c628 -2.308 0.282 nadh dehydrogenase 1 beta 8kda 5.241 2.271 n y n ruditapes_c8406 -2.523 0.282 4.498 1.783 n y n ruditapes_c27365 9.893 0.282 0.159 1.574 n y n ruditapes_c8301 -2.715 0.282 taf13 rna polymerase tata box binding protein -associated 18kda "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0003743 // translation initiation factor activity /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0016251 // general RNA polymerase II transcription factor activity" 4.01 1.477 n y n ruditapes_c21096 -2.853 0.282 3.752 1.315 n y n ruditapes_c3789 -3.41 0.282 3.021 0.886 n y n ruditapes_c27538 -4.276 0.282 2.446 0.572 n y n ruditapes_c11269 -4.578 0.282 fatty acid-binding heart 2.326 0.508 n y n ruditapes_c21640 -4.606 0.282 2.317 0.503 n y n ruditapes_c29752 -5.189 0.282 2.131 0.411 n y n ruditapes_c31253 -5.683 0.282 2.014 0.354 n y n ruditapes_c15774 -6.671 0.282 thymus-specific serine protease 1.853 0.278 n y n ruditapes_c16617 -13.343 0.282 sialic acid-binding lectin 1.454 0.109 n y n ruditapes_c25859 -26.685 0.282 1.296 0.049 n y n ruditapes_lrc38321 -33.357 0.282 1.27 0.038 n y n ruditapes_c1529 -1.262 0.283 50.803 40.259 n n n ruditapes_c18547 -1.8 0.283 9.264 5.146 n y n ruditapes_c21579 -1.807 0.283 9.184 5.083 n y n ruditapes_c25104 -2.541 0.283 carbonyl reductase 1 /// 0055114 // oxidation reduction /// 0004090 // carbonyl reductase (NADPH) activity /// 0005515 // protein binding 4.414 1.737 n y n ruditapes_c25743 -2.614 0.283 4.233 1.619 n y n ruditapes_c29150 -3.336 0.283 3.089 0.926 n y n ruditapes_c18735 -3.384 0.283 3.03 0.895 n y n ruditapes_lrc33503 -3.428 0.283 glutathione s-transferase 2.99 0.872 n y n ruditapes_c3202 -3.841 0.283 bcl2-like 1 /// 0051239 // regulation of multicellular organismal process /// 0014070 // response to organic cyclic substance /// 0040007 // growth /// 0006952 // defense response /// 0042127 // regulation of cell proliferation /// 0007281 // germ cell development /// 0008406 // gonad development /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0006916 // anti-apoptosis /// 0042802 // identical protein binding /// 0010468 // regulation of gene expression /// 0009725 // response to hormone stimulus /// 0051179 // localization /// 0006979 // response to oxidative stress /// 0044260 // cellular macromolecule metabolic process /// 0012505 // endomembrane system /// 0009314 // response to radiation /// 0007005 // mitochondrion organization /// 0051704 // multi-organism process /// 0030003 // cellular cation homeostasis /// 0009653 // anatomical structure morphogenesis /// 0030097 // hemopoiesis /// 0006955 // immune response /// 0051881 // regulation of mitochondrial membrane potential /// 0042113 // B cell activation /// 0046983 // protein dimerization activity /// 0010038 // response to metal ion /// 0043393 // regulation of protein binding /// 0043279 // response to alkaloid /// 0043154 // negative regulation of caspase activity /// 0032845 // negative regulation of homeostatic process /// 0031966 // mitochondrial membrane 2.675 0.696 n y n ruditapes_c15652 -4.043 0.283 2.557 0.632 n y n ruditapes_c13283 -5.782 0.283 1.986 0.344 n y n ruditapes_c12744 -10.563 0.283 1.541 0.146 n y n ruditapes_c30144 -27.797 0.283 1.283 0.046 n y n ruditapes_c11487 -40.028 0.283 1.244 0.031 n y n ruditapes_c19219 -? 0.283 1.151 0 n y n ruditapes2_c1298 -1.328 0.284 34.747 26.175 n n n ruditapes_c1074 -1.559 0.284 15.101 9.689 n y n ruditapes_c15820 -1.693 0.284 11.161 6.594 n y n ruditapes2_c3872 -1.763 0.284 cystatin f 9.839 5.58 n y n ruditapes2_c2582 -2.086 0.284 6.374 3.056 n y n ruditapes_lrc19749 -2.096 0.284 6.315 3.013 n y n ruditapes2_c6497 3.638 0.284 co-chaperone protein /// 0006950 // response to stress /// 0046872 // metal ion binding /// 0005515 // protein binding /// 0006457 // protein folding 0.757 2.756 n y n ruditapes_s39343 -2.259 0.284 protein 5.419 2.399 n y n ruditapes_c24563 -3.009 0.284 3.466 1.152 n y n ruditapes_c36206 -3.046 0.284 -like protein 2 3.413 1.12 n y n ruditapes_c25117 -4.2 0.284 2.47 0.588 n y n ruditapes_c30904 -6.115 0.284 1.918 0.314 n y n ruditapes_c21141 -7.042 0.284 1.786 0.254 n y n ruditapes_c23207 -? 0.284 1.146 0 n y n ruditapes_c127 -1.086 0.285 actin "/// 0005524 // ATP binding /// 0005884 // actin filament /// 0005200 // structural constituent of cytoskeleton /// 0000281 // cytokinesis after mitosis /// 0007126 // meiosis /// 0040007 // growth /// 0002119 // nematode larval development /// 0016887 // ATPase activity /// 0005515 // protein binding /// 0040011 // locomotion /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007108 // cytokinesis, initiation of separation /// 0005938 // cell cortex /// 0009792 // embryonic development ending in birth or egg hatching" 417.04 384.048 n n n ruditapes2_c108 -1.174 0.285 105.145 89.582 n n n ruditapes_c2818 -1.326 0.285 34.72 26.175 n n n ruditapes_c22254 -1.557 0.285 15.129 9.715 n y n ruditapes2_c1709 -1.791 0.285 9.335 5.212 n y n ruditapes_c18918 2.483 0.285 1.786 4.434 n y n ruditapes_c4805 -1.936 0.285 7.558 3.905 n y n ruditapes_c32385 -1.971 0.285 7.237 3.672 n y n ruditapes_c5232 2.955 0.285 1.17 3.457 n y n ruditapes_lrc14897 -2.114 0.285 6.165 2.916 n y n ruditapes_c21035 -2.83 0.285 3.735 1.32 n y n ruditapes_c27654 -3.16 0.285 3.256 1.03 n y n ruditapes_c16683 -10.674 0.285 1.524 0.143 n y n ruditapes_lrc32764 -11.119 0.285 1.506 0.135 n y n ruditapes_c7876 -11.86 0.285 1.482 0.125 n y n ruditapes_c11640 -1.72 0.286 10.545 6.131 n y n ruditapes_c18266 -1.776 0.286 9.53 5.365 n y n ruditapes_c30858 2.364 0.286 2.031 4.801 n y n ruditapes_c21282 -1.881 0.286 8.109 4.311 n y n ruditapes2_c3538 -1.895 0.286 7.963 4.202 n y n ruditapes2_c632 -1.951 0.286 7.401 3.794 n y n ruditapes_c4716 -2.026 0.286 6.748 3.331 n y n ruditapes2_lrc3365 -2.066 0.286 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0019674 // NAD metabolic process /// 0006107 // oxaloacetate metabolic process /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0004470 // malic enzyme activity 6.459 3.126 n y n ruditapes_c28596 -2.165 0.286 5.827 2.691 n y n ruditapes_c9007 -2.284 0.286 5.261 2.304 n y n ruditapes_c11911 -2.906 0.286 3.59 1.235 n y n ruditapes_c23018 -3.013 0.286 3.427 1.137 n y n ruditapes_lrc30464 -3.558 0.286 2.841 0.798 n y n ruditapes_c13430 -4.055 0.286 2.513 0.62 n y n ruditapes2_c846 -1.221 0.287 67.244 55.069 n n n ruditapes_c18303 -1.474 0.287 19.057 12.925 n n n ruditapes_c9764 1.613 0.287 7.66 12.358 n y n ruditapes_lrc36377 -1.533 0.287 ribosomal protein s8 16.022 10.453 n y n ruditapes_c2737 1.787 0.287 ubiquitin b /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0045941 // positive regulation of transcription 4.985 8.907 n y n ruditapes_c9791 -1.596 0.287 13.595 8.516 n y n ruditapes_c2730 -1.684 0.287 enolase /// 0005811 // lipid particle /// 0006096 // glycolysis /// 0000287 // magnesium ion binding /// 0004634 // phosphopyruvate hydratase activity /// 0000015 // phosphopyruvate hydratase complex 11.221 6.662 n y n ruditapes_c7544 -1.719 0.287 brix domain containing 2 /// 0042254 // ribosome biogenesis /// 0005634 // nucleus /// 0005515 // protein binding 10.51 6.113 n y n ruditapes_c7511 -1.863 0.287 mitochondrial ribosomal protein l32 8.293 4.451 n y n ruditapes_c31919 -1.993 0.287 7 3.513 n y n ruditapes2_c1337 -2.276 0.287 5.279 2.319 n y n ruditapes2_c2310 -2.502 0.287 vacuolar atp synthase subunit f "/// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0000221 // vacuolar proton-transporting V-type ATPase, V1 domain /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 4.465 1.785 n y n ruditapes_c4907 -3.097 0.287 3.309 1.068 n y n ruditapes_c17815 -3.212 0.287 3.162 0.984 n y n ruditapes_c20977 -3.78 0.287 2.667 0.705 n y n ruditapes_c11098 -4.726 0.287 2.225 0.471 n y n ruditapes_c15620 -? 0.287 1.134 0 n y n ruditapes_c21769 -1.403 0.288 24.395 17.385 n n n ruditapes_c14846 -1.466 0.288 19.469 13.283 n n n ruditapes_s35711 -1.524 0.288 16.357 10.735 n y n ruditapes_c12433 -1.563 0.288 14.684 9.392 n y n ruditapes_c12754 -1.585 0.288 13.869 8.748 n y n ruditapes_c17259 -1.625 0.288 12.648 7.783 n y n ruditapes_lrc38094 -1.756 0.288 9.806 5.585 n y n ruditapes2_c2168 -1.874 0.288 protein phosphatase regulatory subunit 12b /// 0051017 // actin filament bundle formation /// 0005515 // protein binding /// 0001889 // liver development /// 0004871 // signal transducer activity /// 0004721 // phosphoprotein phosphatase activity /// 0005737 // cytoplasm /// 0006937 // regulation of muscle contraction /// 0007165 // signal transduction /// 0008047 // enzyme activator activity 8.126 4.337 n y n ruditapes2_c3656 -1.957 0.288 selenium binding protein 1 "/// 0015031 // protein transport /// 0005634 // nucleus /// 0016020 // membrane /// 0008430 // selenium binding /// 0005737 // cytoplasm /// 0016765 // transferase activity, transferring alkyl or aryl (other than methyl) groups" 7.273 3.717 n y n ruditapes_c21104 -2.78 0.288 calmodulin /// 0007049 // cell cycle 3.783 1.361 n y n ruditapes_c25416 -2.835 0.288 3.683 1.299 n y n ruditapes2_c2934 -3.336 0.288 3.023 0.906 n y n ruditapes_c19368 -3.38 0.288 2.974 0.88 n y n ruditapes_c20850 -3.964 0.288 2.548 0.643 n y n ruditapes_c9102 -6.036 0.288 1.898 0.314 n y n ruditapes_c33771 -7.783 0.288 zinc metalloprotease-like 1.685 0.216 n y n ruditapes_c31323 -? 0.288 1.128 0 n y n ruditapes_c2600 -1.175 0.289 101.824 86.637 n n n ruditapes2_c2538 -1.546 0.289 15.34 9.925 n y n ruditapes_c2290 -1.594 0.289 13.562 8.508 n y n ruditapes_c11728 -1.653 0.289 11.894 7.197 n y n ruditapes2_c2971 -1.678 0.289 11.295 6.733 n y n ruditapes_lrc35117 -1.764 0.289 9.63 5.46 n y n ruditapes_c9539 -1.797 0.289 9.102 5.064 n y n ruditapes_c6582 -1.978 0.289 7.062 3.57 n y n ruditapes2_c1341 3.311 0.289 0.899 2.978 n y n ruditapes_c30193 -2.176 0.289 5.7 2.619 n y n ruditapes2_c2342 -2.45 0.289 4.574 1.867 n y n ruditapes_c21168 -3.013 0.289 3.384 1.123 n y n ruditapes_c22989 -3.067 0.289 3.313 1.08 n y n ruditapes_c13900 -3.144 0.289 3.222 1.025 n y n ruditapes_c14006 -3.706 0.289 2.694 0.727 n y n ruditapes_c9566 -4.765 0.289 2.196 0.461 n y n ruditapes2_c2539 -5.863 0.289 reverse transcriptase 1.921 0.328 n y n ruditapes2_c1645 -17.79 0.289 1.334 0.075 n y n ruditapes_c18067 -17.79 0.289 1.334 0.075 n y n ruditapes_c14935 -1.299 0.29 39.36 30.294 n n n ruditapes2_c2054 -1.424 0.29 22.353 15.697 n n n ruditapes_c14576 -1.483 0.29 18.282 12.332 n n n ruditapes_lrc24022 -1.532 0.29 15.843 10.339 n y n ruditapes_c14914 -1.587 0.29 13.742 8.659 n y n ruditapes_c25560 -1.613 0.29 12.881 7.985 n y n ruditapes_c452 1.938 0.29 malate dehydrogenase nad /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0019674 // NAD metabolic process /// 0006107 // oxaloacetate metabolic process /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0004470 // malic enzyme activity 3.672 7.116 n y n ruditapes_c21231 2.298 0.29 2.157 4.958 n y n ruditapes_lrc8757 -1.856 0.29 8.279 4.461 n y n ruditapes_c7047 -1.874 0.29 8.062 4.303 n y n ruditapes_c3864 -1.906 0.29 7.693 4.036 n y n ruditapes_c4152 -1.912 0.29 7.639 3.996 n y n ruditapes2_c1065 -2.02 0.29 6.688 3.311 n y n ruditapes_c13762 3.311 0.29 adenylate kinase 1 /// 0005524 // ATP binding /// 0048471 // perinuclear region of cytoplasm /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0005886 // plasma membrane /// 0043005 // neuron projection /// 0004017 // adenylate kinase activity /// 0005515 // protein binding /// 0046034 // ATP metabolic process /// 0046083 // adenine metabolic process /// 0007050 // cell cycle arrest /// 0005829 // cytosol /// 0014042 // positive regulation of neuron maturation /// 0019206 // nucleoside kinase activity 0.894 2.96 n y n ruditapes_c12327 ? 0.29 0 1.12 n y n ruditapes_c15967 -3.291 0.29 3.038 0.923 n y n ruditapes_lrc20284 -3.706 0.29 yellow cameleon 2.693 0.727 n y n ruditapes_c26051 -3.892 0.29 2.573 0.661 n y n ruditapes2_lrc7588 -4.448 0.29 2.301 0.517 n y n ruditapes_c13275 -4.448 0.29 2.294 0.516 n y n ruditapes_c23981 -7.783 0.29 1.673 0.215 n y n ruditapes_c3851 -18.902 0.29 1.314 0.07 n y n ruditapes_c14937 -26.685 0.29 1.257 0.047 n y n ruditapes2_lrc3266 1.404 0.291 15.767 22.138 n n n ruditapes2_c3536 -1.408 0.291 transgelin 2 /// 0043229 // intracellular organelle 23.6 16.76 n n n ruditapes_lrc14924 -1.47 0.291 18.934 12.88 n n n ruditapes_lrc36696 -1.496 0.291 17.48 11.685 n n n ruditapes2_c168 -1.499 0.291 eukaryotic translation initiation factor 3 subunit 7 /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity /// 0005737 // cytoplasm 17.346 11.571 n n n ruditapes_c13304 -1.543 0.291 15.307 9.918 n y n ruditapes_c4663 -1.735 0.291 10.035 5.783 n y n ruditapes_c10339 2.603 0.291 1.545 4.022 n y n ruditapes2_lrc3396 3.679 0.291 electron-transfer- alpha polypeptide /// 0050660 // FAD binding /// 0005759 // mitochondrial matrix /// 0006810 // transport /// 0022900 // electron transport chain /// 0009055 // electron carrier activity 0.72 2.649 n y n ruditapes_c22260 -2.259 0.291 5.256 2.327 n y n ruditapes_c13519 -2.898 0.291 chondroitin sulfate proteoglycan 3 precursor /// 0051823 // regulation of synapse structural plasticity /// 0007155 // cell adhesion 3.531 1.219 n y n ruditapes_c26089 ? 0.291 trinucleotide repeat containing 6a /// 0000166 // nucleotide binding /// 0005737 // cytoplasm /// 0003723 // RNA binding /// 0009267 // cellular response to starvation 0 1.116 n y n ruditapes_c19694 -4.317 0.291 phosphatidylinositol glycan anchor class s /// 0044425 // membrane part /// 0016255 // attachment of GPI anchor to protein /// 0005515 // protein binding /// 0005783 // endoplasmic reticulum 2.339 0.542 n y n ruditapes_c13877 -4.448 0.291 2.29 0.515 n y n ruditapes_c17927 -4.79 0.291 2.169 0.453 n y n ruditapes2_c516 -1.228 0.292 atp h+ mitochondrial f1 o subunit (oligomycin sensitivity conferring protein) /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process 62.667 51.048 n n n ruditapes_s39086 1.306 0.292 ribosomal protein s16 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0022627 // cytosolic small ribosomal subunit 25.946 33.895 n n n ruditapes_lrc33403 -1.329 0.292 33.386 25.125 n n n ruditapes_c1206 -1.499 0.292 17.271 11.521 n n n ruditapes_c19606 -1.516 0.292 16.397 10.814 n y n ruditapes_c31767 -1.579 0.292 13.913 8.813 n y n ruditapes_c8436 -1.608 0.292 12.938 8.048 n y n ruditapes_c21386 -1.652 0.292 11.759 7.119 n y n ruditapes_c11325 -1.817 0.292 8.71 4.794 n y n ruditapes2_c4220 -1.886 0.292 7.836 4.154 n y n ruditapes_c3460 -1.952 0.292 7.183 3.68 n y n ruditapes_c28416 -2.077 0.292 6.218 2.994 n y n ruditapes_c14708 -2.18 0.292 5.623 2.579 n y n ruditapes_c30232 4.272 0.292 0.542 2.316 n y n ruditapes_lrc36922 -2.527 0.292 selenium binding protein 1 4.299 1.701 n y n ruditapes_c15988 -2.743 0.292 3.804 1.387 n y n ruditapes_c19972 ? 0.292 ecan family member (sdn-1) /// 0008045 // motor axon guidance /// 0005576 // extracellular region /// 0005925 // focal adhesion /// 0004888 // transmembrane receptor activity /// 0050908 // detection of light stimulus involved in visual perception 0 1.109 n y n ruditapes2_c1687 -3.494 0.292 ornithine decarboxylase /// 0016829 // lyase activity 2.831 0.81 n y n ruditapes_c29222 -3.812 0.292 2.6 0.682 n y n ruditapes_c20800 -6.115 0.292 1.854 0.303 n y n ruditapes_c31591 -6.227 0.292 1.839 0.295 n y n ruditapes_c12234 1.395 0.293 16.326 22.774 n n n ruditapes2_c2424 -1.506 0.293 16.844 11.182 n y n ruditapes_c19654 -1.511 0.293 16.641 11.016 n y n ruditapes_c23568 1.854 0.293 4.25 7.877 n y n ruditapes2_c1372 -1.623 0.293 12.457 7.675 n y n ruditapes2_c2601 -1.671 0.293 11.254 6.735 n y n ruditapes_c25788 1.991 0.293 3.301 6.573 n y n ruditapes2_c4894 -1.893 0.293 serine protease inhibitor 2 7.767 4.104 n y n ruditapes_c12386 -2.11 0.293 6 2.844 n y n ruditapes_c26164 -2.14 0.293 5.804 2.712 n y n ruditapes_c26839 -2.203 0.293 ets-family transcription factor 5.479 2.487 n y n ruditapes_c2913 -2.307 0.293 5.005 2.169 n y n ruditapes_c10044 -2.859 0.293 probable l-proline 4-hydroxylase 3.573 1.25 n y n ruditapes_c16738 ? 0.293 0 1.108 n y n ruditapes_c6327 ? 0.293 0 1.108 n y n ruditapes2_lrc4412 -3.841 0.293 transposase 2.566 0.668 n y n ruditapes_lrc35368 -4.633 0.293 2.204 0.476 n y n ruditapes_c11489 -4.765 0.293 2.159 0.453 n y n ruditapes_lrc31062 -5.559 0.293 1.947 0.35 n y n ruditapes_c20760 -7.227 0.293 1.704 0.236 n y n ruditapes_lrc15611 -? 0.293 1.104 0 n y n ruditapes_lrc15985 1.216 0.294 48.682 59.216 n n n ruditapes_c9372 -1.357 0.294 28.839 21.25 n n n ruditapes_c31816 -1.368 0.294 27.493 20.094 n n n ruditapes_c1308 -1.481 0.294 18.05 12.184 n n n ruditapes_c14994 1.674 0.294 6.317 10.576 n y n ruditapes_c13240 -1.617 0.294 12.595 7.787 n y n ruditapes2_c1924 -1.636 0.294 transmembrane protein 70 12.062 7.371 n y n ruditapes2_lrc4810 2.114 0.294 2.719 5.749 n y n ruditapes_c12394 2.165 0.294 2.532 5.482 n y n ruditapes_c2629 -1.799 0.294 mitochondrial 28s ribosomal protein s36 /// 0044424 // intracellular part 8.872 4.932 n y n ruditapes_c15817 2.296 0.294 2.131 4.891 n y n ruditapes_c29564 2.428 0.294 solute carrier family 8 (sodium-calcium exchanger) member 3 /// 0007368 // determination of left/right symmetry /// 0016020 // membrane /// 0051480 // cytosolic calcium ion homeostasis /// 0042044 // fluid transport /// 0001947 // heart looping 1.828 4.439 n y n ruditapes_c13564 -1.897 0.294 7.683 4.051 n y n ruditapes_c8817 -1.944 0.294 7.209 3.708 n y n ruditapes_c23846 -1.977 0.294 6.928 3.505 n y n ruditapes2_c3092 -2.108 0.294 thioredoxin domain-containing protein 17 /// 0004601 // peroxidase activity /// 0005515 // protein binding /// 0033209 // tumor necrosis factor-mediated signaling pathway /// 0005829 // cytosol /// 0047134 // protein-disulfide reductase activity /// 0009055 // electron carrier activity 5.979 2.836 n y n ruditapes_c13829 ? 0.294 0 1.102 n y n ruditapes_c13293 -3.283 0.294 3.002 0.915 n y n ruditapes_c6784 -4.225 0.294 elegans protein confirmed by transcript evidence 2.358 0.558 n y n ruditapes_c20909 -4.852 0.294 2.116 0.436 n y n ruditapes_c1812 -8.154 0.294 1.612 0.198 n y n ruditapes_c23763 -10.563 0.294 1.475 0.14 n y n ruditapes_lrc35925 -11.564 0.294 1.435 0.124 n y n ruditapes_lrc19735 -11.86 0.294 1.43 0.121 n y n ruditapes_c21089 -14.454 0.294 1.362 0.094 n y n ruditapes2_lrc4081 -24.461 0.294 1.248 0.051 n y n ruditapes_c15725 -? 0.294 1.1 0 n y n ruditapes2_c140 -1.411 0.295 22.967 16.277 n n n ruditapes_lrc20704 -1.472 0.295 18.553 12.608 n n n ruditapes_c9674 -1.519 0.295 16.087 10.591 n y n ruditapes_c19391 -1.568 0.295 14.093 8.988 n y n ruditapes_c16029 -1.586 0.295 13.489 8.504 n y n ruditapes_c22313 -1.621 0.295 12.405 7.651 n y n ruditapes_c16298 -1.659 0.295 11.422 6.887 n y n ruditapes_c7863 -1.763 0.295 9.391 5.326 n y n ruditapes_c22957 -1.8 0.295 8.81 4.894 n y n ruditapes_c14503 -1.869 0.295 7.94 4.249 n y n ruditapes_c15780 -2.383 0.295 4.696 1.971 n y n ruditapes_c15383 -2.451 0.295 pyrroline-5-carboxylate reductase /// 0055114 // oxidation reduction /// 0005488 // binding /// 0004735 // pyrroline-5-carboxylate reductase activity /// 0006561 // proline biosynthetic process 4.466 1.822 n y n ruditapes_c5298 8.094 0.295 lps-induced tnf-alpha factor 0.197 1.596 n y n ruditapes_c7118 8.394 0.295 0.188 1.575 n y n ruditapes_c3263 -2.707 0.295 3.821 1.412 n y n ruditapes_c33709 -2.743 0.295 3.744 1.365 n y n ruditapes_c19396 -3.256 0.295 3.018 0.927 n y n ruditapes2_lrc4844 -3.736 0.295 2.615 0.7 n y n ruditapes_c2269 -4.448 0.295 2.25 0.506 n y n ruditapes_c5767 -4.448 0.295 2.25 0.506 n y n ruditapes_c8673 -4.79 0.295 2.126 0.444 n y n ruditapes_c20625 -4.977 0.295 2.072 0.416 n y n ruditapes_lrc38888 -5.559 0.295 1.933 0.348 n y n ruditapes_c21853 -26.685 0.295 PREDICTED: similar to ENSANGP00000010363 [Strongylocentrotus purpuratus] 1.227 0.046 n y n ruditapes_c27242 -? 0.295 1.096 0 n y n ruditapes2_c5544 1.814 0.296 ribosomal protein s15 /// 0005840 // ribosome 4.534 8.225 n y n ruditapes_c25746 -1.668 0.296 11.179 6.703 n y n ruditapes_lrc33198 2.447 0.296 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0044238 // primary metabolic process /// 0022625 // cytosolic large ribosomal subunit /// 0010467 // gene expression /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome /// 0034960 // cellular biopolymer metabolic process 1.774 4.341 n y n ruditapes_c2476 -1.981 0.296 nadh dehydrogenase 1 alpha subcomplex subunit mitochondrial precursor 6.832 3.449 n y n ruditapes_c24402 3.238 0.296 0.917 2.971 n y n ruditapes_c10300 5.546 0.296 0.344 1.91 n y n ruditapes_c15265 -2.465 0.296 arp2 actin-related protein 2 homolog /// 0005524 // ATP binding /// 0003779 // actin binding /// 0005885 // Arp2/3 protein complex /// 0042995 // cell projection /// 0005737 // cytoplasm /// 0006928 // cell motion 4.405 1.787 n y n ruditapes_c22743 -2.684 0.296 3.846 1.433 n y n ruditapes_c11571 -2.939 0.296 3.403 1.158 n y n ruditapes_c26891 ? 0.296 0 1.093 n y n ruditapes_lrc32536 -3.481 0.296 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 2.789 0.801 n y n ruditapes_c31199 -3.706 0.296 2.627 0.709 n y n ruditapes_c22582 -5.281 0.296 1.985 0.376 n y n ruditapes_lrc30719 -8.895 0.296 1.55 0.174 n y n ruditapes_c11479 1.452 0.297 12.619 18.324 n n n ruditapes2_lrc4570 2.123 0.297 ribosomal protein s14 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.649 5.622 n y n ruditapes2_c249 -1.743 0.297 9.621 5.519 n y n ruditapes_lrc34931 -1.847 0.297 calcium-binding ef-hand domain protein 8.153 4.414 n y n ruditapes_c19492 -1.883 0.297 7.737 4.109 n y n ruditapes_c14742 -2.174 0.297 5.542 2.55 n y n ruditapes_c11085 -2.336 0.297 4.808 2.058 n y n ruditapes_c1829 -2.411 0.297 hypothetical protein TRIADDRAFT_29295 [Trichoplax adhaerens] 4.556 1.89 n y n ruditapes_c22392 -2.458 0.297 4.409 1.794 n y n ruditapes_c9798 -2.791 0.297 3.631 1.301 n y n ruditapes_c26348 -3.532 0.297 2.739 0.776 n y n ruditapes_c31398 -3.914 0.297 2.478 0.633 n y n ruditapes_c15790 -7.624 0.297 1.638 0.215 n y n ruditapes_c7959 -10.563 0.297 1.457 0.138 n y n ruditapes_lrc13569 -35.58 0.297 1.182 0.033 n y n ruditapes_lrc21732 -? 0.297 1.085 0 n y n ruditapes2_c3329 -1.246 0.298 hemolectin cg7002-pa 53.517 42.965 n n n ruditapes_c11144 -1.458 0.298 myosin heavy chain cardiac muscle specific isoform 2 19.175 13.149 n n n ruditapes_c6632 -1.705 0.298 10.305 6.043 n y n ruditapes_c17964 -1.938 0.298 7.129 3.678 n y n ruditapes2_lrc4833 -2.124 0.298 histone /// 0005811 // lipid particle /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0005700 // polytene chromosome /// 0000786 // nucleosome 5.771 2.717 n y n ruditapes_c18581 -2.26 0.298 orf2-encoded protein 5.108 2.261 n y n ruditapes_c8746 5.059 0.298 0.395 2 n y n ruditapes_c22637 -2.943 0.298 3.371 1.145 n y n ruditapes_c16133 ? 0.298 0 1.085 n y n ruditapes_lrc33160 -3.094 0.298 predicted protein [Nematostella vectensis] 3.155 1.02 n y n ruditapes_c25638 -3.197 0.298 3.045 0.953 n y n ruditapes_c22873 -3.384 0.298 2.85 0.842 n y n ruditapes_c23661 -3.428 0.298 2.815 0.821 n y n ruditapes_c9476 -11.119 0.298 1.431 0.129 n y n ruditapes_c15961 -1.636 0.299 c3orf32 protein /// 0005515 // protein binding 11.81 7.221 n y n ruditapes_c12831 -1.721 0.299 9.951 5.783 n y n ruditapes2_c1571 -1.733 0.299 9.715 5.605 n y n ruditapes_c7539 -1.752 0.299 transcript expressed during hematopoiesis 2 9.425 5.379 n y n ruditapes2_c345 -1.879 0.299 coiled-coil domain containing 19 "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0008270 // zinc ion binding /// 0003707 // steroid hormone receptor activity" 7.717 4.108 n y n ruditapes_c15010 -1.922 0.299 7.275 3.786 n y n ruditapes_c15212 -1.926 0.299 7.223 3.751 n y n ruditapes_c24774 -2.114 0.299 5.824 2.755 n y n ruditapes_c26703 -2.305 0.299 4.901 2.127 n y n ruditapes_c4124 -2.334 0.299 4.78 2.048 n y n ruditapes_c7010 -2.395 0.299 4.579 1.912 n y n ruditapes_c7058 -2.562 0.299 protein 4.081 1.593 n y n ruditapes_c393 -2.622 0.299 3.935 1.501 n y n ruditapes_c31757 ? 0.299 0 1.078 n y n ruditapes_c9521 -3.046 0.299 3.204 1.052 n y n ruditapes_c7263 -12.787 0.299 1.374 0.107 n y n ruditapes_c17916 -? 0.299 1.08 0 n y n ruditapes_c3372 -1.419 0.3 21.818 15.375 n n n ruditapes_lrc32741 2.024 0.3 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 3.046 6.164 n y n ruditapes_lrc28034 -1.925 0.3 7.203 3.741 n y n ruditapes_lrc36973 -2.031 0.3 6.325 3.114 n y n ruditapes_c18884 -2.335 0.3 4.765 2.041 n y n ruditapes_lrc34013 -5.15 0.3 ribosomal protein s10 /// 0005840 // ribosome 1.985 0.385 n y n ruditapes_c7468 -31.133 0.3 1.183 0.038 n y n ruditapes_c9298 1.736 0.301 paramyosin /// 0016459 // myosin complex /// 0005737 // cytoplasm 5.27 9.151 n y n ruditapes2_c850 -1.739 0.301 9.536 5.483 n y n ruditapes2_lrc5927 2.51 0.301 mitochondrial atp synthase lipid binding protein precursor "/// 0006811 // ion transport /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain" 1.624 4.076 n y n ruditapes_lrc18887 -2.138 0.301 5.64 2.638 n y n ruditapes_c555 -2.157 0.301 glutathione s-transferase /// 0005515 // protein binding 5.533 2.565 n y n ruditapes_c14249 -2.205 0.301 actin related protein 2 3 subunit 41kda /// 0003779 // actin binding /// 0005885 // Arp2/3 protein complex /// 0030036 // actin cytoskeleton organization 5.294 2.402 n y n ruditapes_c7037 -2.314 0.301 4.817 2.082 n y n ruditapes_c16948 -2.587 0.301 3.989 1.542 n y n ruditapes2_c3226 -3.235 0.301 thioester-containing protein 2.957 0.914 n y n ruditapes_c25206 -3.262 0.301 2.93 0.898 n y n ruditapes2_c2391 -3.757 0.301 thiolester containing protein iv 2.536 0.675 n y n ruditapes_c10670 -5.683 0.301 1.861 0.327 n y n ruditapes_c25651 -5.837 0.301 1.83 0.314 n y n ruditapes2_c2357 -? 0.301 1.069 0 n y n ruditapes_c712 -1.353 0.302 28.403 20.991 n n n ruditapes2_c3155 -1.392 0.302 23.958 17.206 n n n ruditapes2_c2418 -1.41 0.302 22.387 15.873 n n n ruditapes_c2434 -2.181 0.302 mitochondrial ribosomal protein s14 /// 0005761 // mitochondrial ribosome 5.381 2.467 n y n ruditapes_c16678 -2.612 0.302 3.909 1.497 n y n ruditapes_c20945 -2.68 0.302 3.763 1.404 n y n ruditapes_c11388 ? 0.302 0 1.067 n y n ruditapes2_c2548 ? 0.302 0 1.065 n y n ruditapes_c2305 -4.031 0.302 placenta-specific 8 2.371 0.588 n y n ruditapes_lrc15447 -4.765 0.302 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 2.074 0.435 n y n ruditapes2_lrc3660 -6.177 0.302 1.769 0.286 n y n ruditapes_c26117 -6.354 0.302 1.743 0.274 n y n ruditapes2_c766 -7.783 0.302 1.588 0.204 n y n ruditapes_c7940 -35.58 0.302 1.16 0.033 n y n ruditapes_c22220 -? 0.302 1.063 0 n y n ruditapes2_c2620 -1.648 0.303 11.349 6.888 n y n ruditapes2_c1917 2.356 0.303 1.908 4.495 n y n ruditapes_c14649 -1.898 0.303 7.372 3.884 n y n ruditapes_c12600 -2.372 0.303 4.572 1.928 n y n ruditapes_c4375 -2.448 0.303 isoform cra_a 4.332 1.769 n y n ruditapes_c23077 -2.603 0.303 3.925 1.508 n y n ruditapes_c25256 -2.669 0.303 3.781 1.417 n y n ruditapes_c25116 -4.448 0.303 2.176 0.489 n y n ruditapes2_c1859 -6.671 0.303 1.692 0.254 n y n ruditapes_lrc25338 -13.343 0.303 vsph_botjr ame: full=venom serine protease homolog flags: precursor 1.334 0.1 n y n ruditapes2_c128 1.411 0.304 cathepsin d 14.518 20.49 n n n ruditapes2_lrc4805 -1.392 0.304 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 23.797 17.091 n n n ruditapes_lrc35409 -1.628 0.304 ribosomal protein s5 /// 0006414 // translational elongation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 11.75 7.216 n y n ruditapes_c27186 -1.738 0.304 9.435 5.429 n y n ruditapes_c14402 -1.744 0.304 9.352 5.363 n y n ruditapes_c16268 -1.796 0.304 8.555 4.763 n y n ruditapes_c11991 -1.912 0.304 7.201 3.766 n y n ruditapes_c3883 3.328 0.304 rna-binding protein 8a "/// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0000166 // nucleotide binding /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0051028 // mRNA transport /// 0005737 // cytoplasm /// 0000398 // nuclear mRNA splicing, via spliceosome" 0.835 2.778 n y n ruditapes_c10123 -2.174 0.304 5.374 2.472 n y n ruditapes_c14589 -2.343 0.304 4.656 1.987 n y n ruditapes_c11070 -2.442 0.304 4.321 1.77 n y n ruditapes_c22158 -2.57 0.304 3.98 1.549 n y n ruditapes_c24400 -2.641 0.304 3.815 1.445 n y n ruditapes_c19175 -2.825 0.304 3.46 1.225 n y n ruditapes_c21892 -2.965 0.304 3.247 1.095 n y n ruditapes_c20111 ? 0.304 0 1.056 n y n ruditapes2_c805 -3.377 0.304 PREDICTED: hypothetical protein [Rattus norvegicus] 2.788 0.826 n y n ruditapes_c23281 -7.783 0.304 1.576 0.202 n y n ruditapes2_c319 -1.389 0.305 24.121 17.372 n n n ruditapes2_c545 -1.554 0.305 13.992 9.004 n y n ruditapes_lrc7739 -1.708 0.305 9.954 5.83 n y n ruditapes_c16454 -2.053 0.305 6.055 2.95 n y n ruditapes_c10230 -2.107 0.305 5.714 2.712 n y n ruditapes_c14863 -2.489 0.305 4.181 1.679 n y n ruditapes_c20324 -2.549 0.305 4.023 1.578 n y n ruditapes_c5976 -2.761 0.305 3.567 1.292 n y n ruditapes_c4384 ? 0.305 hypothetical protein BRAFLDRAFT_217335 [Branchiostoma floridae] 0 1.054 n y n ruditapes2_c413 ? 0.305 0 1.053 n y n ruditapes_c31636 -3.212 0.305 2.933 0.913 n y n ruditapes_s38781 -4.818 0.305 2.035 0.422 n y n ruditapes_c3217 -5.256 0.305 1.921 0.366 n y n ruditapes_lrc33531 -8.524 0.305 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 1.516 0.178 n y n ruditapes_c16025 -? 0.305 1.053 0 n y n ruditapes_lrc23766 1.524 0.306 9.32 14.205 n y n ruditapes_lrc8735 -1.654 0.306 11.037 6.674 n y n ruditapes_s36849 -1.831 0.306 40s ribosomal protein s3 /// 0005622 // intracellular 8.038 4.389 n y n ruditapes_c12366 -1.839 0.306 7.958 4.328 n y n ruditapes2_c2162 -2.038 0.306 6.114 2.999 n y n ruditapes_c25248 -2.123 0.306 5.593 2.635 n y n ruditapes_c18285 8.994 0.306 0.164 1.471 n y n ruditapes_c27039 -2.737 0.306 3.599 1.315 n y n ruditapes_c20666 -3.165 0.306 2.981 0.942 n y n ruditapes_c16246 -4.245 0.306 2.231 0.525 n y n ruditapes_c13808 -4.448 0.306 2.152 0.484 n y n ruditapes_c20254 -4.448 0.306 2.15 0.484 n y n ruditapes_c12236 -4.619 0.306 2.092 0.453 n y n ruditapes_c8472 -4.633 0.306 2.084 0.45 n y n ruditapes_c25227 -4.695 0.306 2.064 0.44 n y n ruditapes_c19393 -8.006 0.306 1.548 0.193 n y n ruditapes2_c1847 -8.006 0.306 pol-like protein 1.543 0.193 n y n ruditapes_c11088 -1.259 0.307 47.046 37.38 n n n ruditapes2_lrc4627 -1.304 0.307 nucleoside diphosphate kinase /// 0005488 // binding /// 0009117 // nucleotide metabolic process 35.804 27.465 n n n ruditapes_c19251 1.551 0.307 8.522 13.218 n y n ruditapes2_c777 1.845 0.307 4.07 7.508 n y n ruditapes2_c1346 -1.73 0.307 9.482 5.482 n y n ruditapes_lrc38630 -1.899 0.307 7.246 3.815 n y n ruditapes2_lrc5550 2.627 0.307 1.412 3.71 n y n ruditapes2_c897 -1.932 0.307 6.929 3.586 n y n ruditapes2_c3148 -2.025 0.307 6.186 3.055 n y n ruditapes_c2270 -2.14 0.307 5.479 2.56 n y n ruditapes_c21994 -2.19 0.307 5.226 2.386 n y n ruditapes2_c6540 10.118 0.307 transmembrane protein 14c /// 0005739 // mitochondrion /// 0016020 // membrane 0.139 1.406 n y n ruditapes_lrc34472 -2.68 0.307 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 3.694 1.378 n y n ruditapes_c26932 17.538 0.307 0.071 1.241 n y n ruditapes_c22113 -3.336 0.307 2.788 0.836 n y n ruditapes_c25981 -3.614 0.307 2.57 0.711 n y n ruditapes_c20904 -4.619 0.307 2.083 0.451 n y n ruditapes_c14425 -26.685 0.307 1.168 0.044 n y n ruditapes_c26235 -? 0.307 1.044 0 n y n ruditapes_c6528 1.384 0.308 16.131 22.326 n n n ruditapes2_c192 -1.421 0.308 20.958 14.744 n n n ruditapes_lrc20984 1.679 0.308 atp synthase subunit b 5.892 9.891 n y n ruditapes_c28507 -1.624 0.308 11.718 7.218 n y n ruditapes_c19074 1.967 0.308 3.236 6.367 n y n ruditapes_lrc15923 -1.706 0.308 9.885 5.795 n y n ruditapes2_lrc3509 -1.744 0.308 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 9.198 5.273 n y n ruditapes_c1348 -1.856 0.308 7.67 4.133 n y n ruditapes_c22175 -1.957 0.308 6.678 3.413 n y n ruditapes2_c5530 2.878 0.308 ribosomal protein l17 /// 0005840 // ribosome 1.131 3.256 n y n ruditapes2_c479 -2.108 0.308 5.644 2.677 n y n ruditapes2_c2660 4.547 0.308 coatomer protein subunit epsilon "/// 0048205 // COPI coating of Golgi vesicle /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER /// 0015031 // protein transport /// 0005198 // structural molecule activity /// 0006891 // intra-Golgi vesicle-mediated transport /// 0005515 // protein binding /// 0005829 // cytosol /// 0030126 // COPI vesicle coat" 0.455 2.068 n y n ruditapes_c18465 5.846 0.308 0.302 1.765 n y n ruditapes_c30779 -2.479 0.308 4.153 1.675 n y n ruditapes_c24789 -4.186 0.308 2.239 0.535 n y n ruditapes_c22387 -4.289 0.308 2.194 0.512 n y n ruditapes_c31987 -6.857 0.308 1.64 0.239 n y n ruditapes2_c812 -7.561 0.308 1.567 0.207 n y n ruditapes_c24832 -8.339 0.308 1.51 0.181 n y n ruditapes_c13383 -1.297 0.309 gtp-binding nuclear protein ran 36.855 28.417 n n n ruditapes_lrc35922 -1.459 0.309 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 18.258 12.513 n n n ruditapes2_lrc4320 1.641 0.309 ribosomal protein s8 /// 0005811 // lipid particle /// 0005840 // ribosome 6.477 10.628 n y n ruditapes_c15710 -1.64 0.309 11.226 6.844 n y n ruditapes_c23417 -2.157 0.309 5.349 2.48 n y n ruditapes_c28746 -2.267 0.309 4.851 2.14 n y n ruditapes_c6526 5.332 0.309 0.348 1.854 n y n ruditapes2_lrc4457 7.195 0.309 ribosomal protein s3 "/// 0042981 // regulation of apoptosis /// 0060255 // regulation of macromolecule metabolic process /// 0065009 // regulation of molecular function /// 0006974 // response to DNA damage stimulus /// 0019219 // regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0005829 // cytosol /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome" 0.22 1.586 n y n ruditapes_c28833 -2.561 0.309 3.918 1.53 n y n ruditapes2_c2704 -2.631 0.309 3.763 1.43 n y n ruditapes2_c498 -2.761 0.309 3.504 1.269 n y n ruditapes_c30514 -3.058 0.309 3.057 1 n y n ruditapes_c13928 -3.277 0.309 2.826 0.862 n y n ruditapes_c30273 -3.632 0.309 2.533 0.697 n y n ruditapes_c22883 -4.077 0.309 2.274 0.558 n y n ruditapes_c8029 -4.299 0.309 2.185 0.508 n y n ruditapes_lrc25047 -5.003 0.309 1.95 0.39 n y n ruditapes_c25801 -6.671 0.309 1.654 0.248 n y n ruditapes_c11396 -7.561 0.309 1.56 0.206 n y n ruditapes_c7872 -8.895 0.309 1.467 0.165 n y n ruditapes_c14751 -10.007 0.309 1.412 0.141 n y n ruditapes_c24884 -10.007 0.309 1.409 0.141 n y n ruditapes_c2284 -? 0.309 1.037 0 n y n ruditapes_s37634 -? 0.309 1.034 0 n y n ruditapes_lrc17246 -1.374 0.31 25.073 18.246 n n n ruditapes_c16667 1.471 0.31 11.098 16.329 n n n ruditapes_c29980 -1.57 0.31 13.183 8.398 n y n ruditapes_c7291 -1.617 0.31 11.778 7.283 n y n ruditapes_c8723 2.03 0.31 2.896 5.878 n y n ruditapes_c10625 -1.709 0.31 9.742 5.702 n y n ruditapes_c16872 -2.073 0.31 5.795 2.795 n y n ruditapes2_c1806 -2.134 0.31 5.446 2.552 n y n ruditapes2_c1698 -2.224 0.31 5.004 2.25 n y n ruditapes_c31190 -2.74 0.31 3.528 1.288 n y n ruditapes_c8291 -3.058 0.31 epididymal secretory protein e1 precursor 3.051 0.998 n y n ruditapes_c31267 -6.671 0.31 1.644 0.246 n y n ruditapes_c6914 -9.066 0.31 1.45 0.16 n y n ruditapes_lrc32086 -12.453 0.31 1.321 0.106 n y n ruditapes_lrc31231 -16.678 0.31 1.238 0.074 n y n ruditapes_c15091 -16.678 0.31 1.237 0.074 n y n ruditapes_c2218 -1.379 0.311 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 24.481 17.756 n n n ruditapes2_lrc6078 -1.536 0.311 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 14.365 9.354 n y n ruditapes_c30177 -1.717 0.311 9.533 5.554 n y n ruditapes_c4515 -1.724 0.311 adp-ribosylation factor 1 /// 0007264 // small GTPase mediated signal transduction /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0006471 // protein amino acid ADP-ribosylation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0007269 // neurotransmitter secretion /// 0016197 // endosome transport /// 0007155 // cell adhesion /// 0048488 // synaptic vesicle endocytosis /// 0008360 // regulation of cell shape 9.44 5.477 n y n ruditapes_c21562 -1.806 0.311 8.202 4.542 n y n ruditapes_c9026 -1.826 0.311 7.94 4.348 n y n ruditapes_lrc34023 2.367 0.311 1.824 4.317 n y n ruditapes_c14669 -1.97 0.311 6.5 3.299 n y n ruditapes_c13215 -2.183 0.311 dna repair endonuclease partial 5.177 2.371 n y n ruditapes_c16426 -2.224 0.311 4.995 2.246 n y n ruditapes_c19349 6.446 0.311 fibropellin partial 0.257 1.655 n y n ruditapes2_c2482 -4.121 0.311 2.237 0.543 n y n ruditapes_s37231 -13.343 0.311 DEC-3 [Lymnaea stagnalis] 1.293 0.097 n y n ruditapes_c26302 -? 0.311 1.026 0 n y n ruditapes_c21306 -1.344 0.312 28.514 21.222 n n n ruditapes2_c3035 -1.374 0.312 24.821 18.06 n n n ruditapes_c8971 -1.408 0.312 wd repeat domain 16 /// 0005515 // protein binding /// 0005737 // cytoplasm 21.63 15.363 n n n ruditapes_c4301 -1.453 0.312 18.439 12.691 n n n ruditapes_c9748 -1.744 0.312 9.042 5.185 n y n ruditapes_c14226 -1.768 0.312 8.683 4.91 n y n ruditapes_c10213 -1.949 0.312 6.653 3.414 n y n ruditapes_c30251 -2.003 0.312 6.216 3.103 n y n ruditapes_c18608 -2.261 0.312 4.804 2.125 n y n ruditapes_c13726 -2.302 0.312 4.646 2.018 n y n ruditapes_c19224 -2.405 0.312 4.297 1.787 n y n ruditapes_c26560 -2.439 0.312 4.193 1.719 n y n ruditapes_c10527 -2.541 0.312 3.928 1.545 n y n ruditapes_c21671 -2.669 0.312 3.638 1.363 n y n ruditapes_c5676 -2.965 0.312 3.147 1.061 n y n ruditapes_c16581 ? 0.312 0 1.024 n y n ruditapes_c7590 ? 0.312 0 1.02 n y n ruditapes_s35073 -4.276 0.312 2.159 0.505 n y n ruditapes_c30569 -31.133 0.312 1.126 0.036 n y n ruditapes_c17859 -? 0.312 1.024 0 n y n ruditapes2_c1256 -? 0.312 1.022 0 n y n ruditapes2_c2072 1.133 0.313 109.667 124.3 n n n ruditapes_c18340 -1.812 0.313 8.051 4.443 n y n ruditapes_c26137 -1.878 0.313 7.285 3.879 n y n ruditapes_c12554 2.603 0.313 1.407 3.662 n y n ruditapes_c25379 -1.977 0.313 6.392 3.234 n y n ruditapes_lrc33581 3.448 0.313 0.749 2.582 n y n ruditapes_c3392 -2.291 0.313 4.674 2.04 n y n ruditapes2_lrc4469 -2.397 0.313 4.301 1.794 n y n ruditapes2_c1066 -2.46 0.313 4.123 1.676 n y n ruditapes_c18795 6.895 0.313 0.23 1.587 n y n ruditapes_c15334 -2.628 0.313 3.7 1.408 n y n ruditapes_lrc33506 -3.027 0.313 cytochrome c oxidase subunit va 3.051 1.008 n y n ruditapes2_c380 -3.62 0.313 glutathione peroxidase 3 2.497 0.69 n y n ruditapes_lrc11545 -5.189 0.313 1.871 0.361 n y n ruditapes2_lrc4403 -5.645 0.313 1.78 0.315 n y n ruditapes_c24152 -8.339 0.313 1.479 0.177 n y n ruditapes_c5739 -8.45 0.313 1.472 0.174 n y n ruditapes_c22058 -1.166 0.314 101.143 86.71 n n n ruditapes2_lrc3130 -1.27 0.314 42.345 33.342 n n n ruditapes2_c3241 -1.346 0.314 27.957 20.773 n n n ruditapes_c22610 -1.488 0.314 16.312 10.964 n n n ruditapes_c16792 -1.5 0.314 15.753 10.504 n y n ruditapes_c9544 -1.563 0.314 scp_lymst ame: full=small cardioactive peptides contains: ame: full=small cardioactive peptide b short=scp b short=scpb contains: ame: full=small cardioactive peptide a short=scp a short=scpa flags: precursor 13.201 8.444 n y n ruditapes_lrc38876 1.824 0.314 4.131 7.536 n y n ruditapes_c29750 -1.606 0.314 11.87 7.391 n y n ruditapes_c14350 -1.981 0.314 6.349 3.204 n y n ruditapes_c8104 -2.125 0.314 kazal-type proteinase inhibitor 5.407 2.544 n y n ruditapes2_c1380 -2.152 0.314 5.27 2.449 n y n ruditapes2_lrc5177 -2.224 0.314 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 4.938 2.22 n y n ruditapes_c22953 -2.412 0.314 4.239 1.757 n y n ruditapes_c15913 11.692 0.314 0.112 1.311 n y n ruditapes_c20238 15.739 0.314 0.078 1.229 n y n ruditapes_c5090 ? 0.314 nucleolar protein nhp2 0 1.014 n y n ruditapes_c4392 -3.05 0.314 3.008 0.986 n y n ruditapes_c1949 -3.227 0.314 2.813 0.872 n y n ruditapes_lrc34606 -3.577 0.314 thioredoxin domain containing 17 /// 0004601 // peroxidase activity /// 0005515 // protein binding /// 0033209 // tumor necrosis factor-mediated signaling pathway /// 0005829 // cytosol /// 0047134 // protein-disulfide reductase activity /// 0009055 // electron carrier activity 2.525 0.706 n y n ruditapes_c27902 -3.614 0.314 2.493 0.69 n y n ruditapes_c23431 -3.628 0.314 2.482 0.684 n y n ruditapes_c10287 -3.745 0.314 reverse transcriptase 2.411 0.644 n y n ruditapes_c19096 -5.054 0.314 1.899 0.376 n y n ruditapes_lrc26759 -10.378 0.314 1.363 0.131 n y n ruditapes_c29636 -11.86 0.314 1.317 0.111 n y n ruditapes_c11312 1.251 0.315 34.046 42.586 n n n ruditapes_lrc29070 1.579 0.315 apextrin 7.544 11.915 n y n ruditapes_lrc35720 -1.476 0.315 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.859 11.422 n n n ruditapes_c1260 -1.568 0.315 zinc finger (c3hc4-type ring finger) family protein 12.985 8.283 n y n ruditapes_c4640 -1.647 0.315 10.773 6.54 n y n ruditapes_c11988 -1.679 0.315 ras-like gtp-binding protein "/// 0000915 // cytokinesis, contractile ring formation /// 0002119 // nematode larval development /// 0019901 // protein kinase binding /// 0008406 // gonad development /// 0016020 // membrane /// 0005525 // GTP binding /// 0014057 // positive regulation of acetylcholine secretion /// 0003924 // GTPase activity /// 0030241 // muscle thick filament assembly /// 0005938 // cell cortex /// 0032154 // cleavage furrow /// 0040017 // positive regulation of locomotion /// 0032970 // regulation of actin filament-based process /// 0016477 // cell migration /// 0009792 // embryonic development ending in birth or egg hatching" 10.107 6.019 n y n ruditapes_c27643 -1.827 0.315 7.794 4.267 n y n ruditapes_c25890 -1.902 0.315 rna (guanine-9-) methyltransferase domain containing 3 /// 0016740 // transferase activity 6.983 3.671 n y n ruditapes_c15931 -3.113 0.315 2.924 0.939 n y n ruditapes_c29903 -3.28 0.315 2.753 0.839 n y n ruditapes2_c1195 -3.336 0.315 2.704 0.811 n y n ruditapes_lrc32180 -5.132 0.315 1.868 0.364 n y n ruditapes_c16279 -6.671 0.315 1.614 0.242 n y n ruditapes_s35659 -? 0.315 1.012 0 n y n ruditapes_c13356 -? 0.315 1.009 0 n y n ruditapes_c28898 -? 0.315 1.009 0 n y n ruditapes_c31155 -? 0.315 1.009 0 n y n ruditapes2_c991 -1.415 0.316 "PREDICTED: hypothetical protein, partial [Homo sapiens]" 20.746 14.663 n n n ruditapes2_c1104 1.551 0.316 8.174 12.682 n y n ruditapes_c25193 2.179 0.316 2.266 4.939 n y n ruditapes_lrc33803 -1.833 0.316 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 7.697 4.199 n y n ruditapes_c26514 -1.939 0.316 6.619 3.414 n y n ruditapes_c16176 4.797 0.316 0.402 1.93 n y n ruditapes_lrc13723 -2.623 0.316 dynein light chain roadblock-type 2 /// 0005868 // cytoplasmic dynein complex /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 3.675 1.401 n y n ruditapes_c19404 ? 0.316 0 1.007 n y n ruditapes2_lrc4544 -3.065 0.316 ependymin related protein-1 precursor 2.968 0.968 n y n ruditapes_c30868 -3.494 0.316 sam domain- and hd domain-containing protein 1 /// 0005634 // nucleus /// 0003824 // catalytic activity /// 0006955 // immune response 2.557 0.732 n y n ruditapes_c12273 -3.892 0.316 biogenesis of lysosome-related organelles complex- subunit 2 /// 0044444 // cytoplasmic part /// 0005515 // protein binding /// 0048522 // positive regulation of cellular process /// 0043229 // intracellular organelle 2.309 0.593 n y n ruditapes_lrc37150 -6.989 0.316 hydrogen-transporting atp g- 1.574 0.225 n y n ruditapes2_lrc5090 -1.154 0.317 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 115.53 100.104 n n n ruditapes_c10801 -1.373 0.317 24.463 17.822 n n n ruditapes_c33312 -1.412 0.317 cytochrome c-1 "/// 0005811 // lipid particle /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0045153 // electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity /// 0020037 // heme binding /// 0005750 // mitochondrial respiratory chain complex III" 20.841 14.759 n n n ruditapes_c13510 -1.435 0.317 19.214 13.394 n n n ruditapes_c2098 -1.728 0.317 eukaryotic translation initiation factor 1a "/// 0007224 // smoothened signaling pathway /// 0016282 // eukaryotic 43S preinitiation complex /// 0006413 // translational initiation /// 0006911 // phagocytosis, engulfment /// 0000022 // mitotic spindle elongation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0003723 // RNA binding" 9.112 5.273 n y n ruditapes_c17540 -1.757 0.317 coenzyme q6 homolog "/// 0050660 // FAD binding /// 0005739 // mitochondrion /// 0016709 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NADH or NADPH as one donor, and incorporation of one atom of oxygen /// 0006744 // ubiquinone biosynthetic process" 8.681 4.941 n y n ruditapes_lrc34766 -1.927 0.317 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.692 3.472 n y n ruditapes_c17059 -2.142 0.317 5.26 2.455 n y n ruditapes_c19604 -2.224 0.317 4.861 2.186 n y n ruditapes_c28041 -2.33 0.317 4.452 1.911 n y n ruditapes_c18426 8.544 0.317 0.167 1.431 n y n ruditapes_lrc9867 -2.859 0.317 3.233 1.131 n y n ruditapes2_c1070 -3.614 0.317 2.468 0.683 n y n ruditapes_c5478 -4.276 0.317 ubiquitin specific 2.116 0.495 n y n ruditapes_c20211 -5.683 0.317 1.74 0.306 n y n ruditapes_c36459 -7.783 0.317 1.496 0.192 n y n ruditapes_c30467 -8.895 0.317 1.42 0.16 n y n ruditapes_c19976 -28.909 0.317 1.11 0.038 n y n ruditapes_c20399 -? 0.317 1.003 0 n y n ruditapes_c732 -? 0.317 cell wall surface anchor family protein /// 0044464 // cell part 1.001 0 n y n ruditapes_c24937 -? 0.317 1 0 n y n ruditapes_c11087 1.407 0.318 13.946 19.618 n n n ruditapes_c34580 1.559 0.318 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 7.925 12.356 n y n ruditapes_c12715 -1.472 0.318 16.874 11.462 n n n ruditapes_c9770 -1.541 0.318 13.771 8.936 n y n ruditapes2_c2675 1.721 0.318 5.1 8.776 n y n ruditapes_c11405 -1.735 0.318 8.957 5.162 n y n ruditapes_c9039 -1.853 0.318 7.4 3.993 n y n ruditapes2_c1610 -1.869 0.318 calmodulin /// 0005509 // calcium ion binding 7.237 3.872 n y n ruditapes_lrc38956 -1.894 0.318 6.987 3.688 n y n ruditapes_c26563 2.614 0.318 1.37 3.58 n y n ruditapes_c19518 -1.959 0.318 6.392 3.263 n y n ruditapes_c32055 -2.191 0.318 4.992 2.279 n y n ruditapes_c16276 -2.224 0.318 4.84 2.177 n y n ruditapes_c28986 ? 0.318 0 0.996 n y n ruditapes_c14632 -3.065 0.318 2.946 0.961 n y n ruditapes_c27250 -3.336 0.318 2.669 0.8 n y n ruditapes_c26856 -3.558 0.318 2.494 0.701 n y n ruditapes_c19035 -6.393 0.318 1.63 0.255 n y n ruditapes_c23787 -7.561 0.318 1.506 0.199 n y n ruditapes_c21944 -8.006 0.318 dna-mediated transposase 1.472 0.184 n y n ruditapes_c24406 -9.451 0.318 1.384 0.146 n y n ruditapes2_lrc6687 -13.343 0.318 1.257 0.094 n y n ruditapes_c10999 -1.285 0.319 37.827 29.43 n n n ruditapes_c12747 -1.5 0.319 15.387 10.257 n y n ruditapes_c2493 -1.687 0.319 9.762 5.787 n y n ruditapes_c23377 -1.977 0.319 6.243 3.158 n y n ruditapes_c25824 -2.152 0.319 5.148 2.392 n y n ruditapes_c4379 -2.224 0.319 glutathione s-transferase mu 4.818 2.167 n y n ruditapes_c25111 4.497 0.319 0.443 1.994 n y n ruditapes_c28346 -2.342 0.319 4.372 1.866 n y n ruditapes_c11753 -2.356 0.319 mitochondrial ribosomal protein s2 /// 0005840 // ribosome 4.331 1.838 n y n ruditapes2_c86 -2.471 0.319 3.981 1.611 n y n ruditapes_lrc34235 -2.603 0.319 ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 3.667 1.409 n y n ruditapes_c17271 -2.636 0.319 3.599 1.365 n y n ruditapes_c28665 ? 0.319 0 0.995 n y n ruditapes_c9677 -4.324 0.319 transmembrane serine protease 9 2.084 0.482 n y n ruditapes_c9286 -1.218 0.32 60.139 49.356 n n n ruditapes2_c2243 -1.281 0.32 38.678 30.189 n n n ruditapes_c17264 1.742 0.32 4.823 8.399 n y n ruditapes_c23119 -1.786 0.32 8.149 4.563 n y n ruditapes_c12940 -1.906 0.32 6.796 3.566 n y n ruditapes2_c2515 2.657 0.32 1.304 3.465 n y n ruditapes_c11895 -2.001 0.32 6.032 3.014 n y n ruditapes_lrc12865 -2.109 0.32 5.354 2.539 n y n ruditapes_c13801 -2.254 0.32 4.675 2.074 n y n ruditapes_c4929 -2.462 0.32 4.003 1.626 n y n ruditapes_c18110 -2.508 0.32 3.872 1.544 n y n ruditapes2_c832 -3.451 0.32 2.549 0.739 n y n ruditapes_c3013 -4.448 0.32 2.033 0.457 n y n ruditapes_c9954 -5.401 0.32 1.776 0.329 n y n ruditapes_c1623 -7.413 0.32 dynein heavy chain 1.504 0.203 n y n ruditapes_c28121 -7.783 0.32 1.475 0.19 n y n ruditapes_c23318 -13.343 0.32 1.247 0.093 n y n ruditapes_c22293 -? 0.32 0.988 0 n y n ruditapes2_c1871 -1.316 0.321 31.484 23.919 n n n ruditapes2_c1280 -1.333 0.321 28.849 21.634 n n n ruditapes_c1677 -1.363 0.321 25.139 18.448 n n n ruditapes_c16827 -1.377 0.321 23.699 17.215 n n n ruditapes2_c585 -1.518 0.321 14.47 9.535 n y n ruditapes_c12206 -1.532 0.321 13.905 9.077 n y n ruditapes_c6905 -1.685 0.321 9.747 5.785 n y n ruditapes_c6951 -1.733 0.321 apolipoprotein d /// 0005488 // binding 8.889 5.128 n y n ruditapes_lrc34480 2.176 0.321 cg15828 cg15828- partial 2.231 4.853 n y n ruditapes_c8361 2.464 0.321 1.575 3.88 n y n ruditapes_c36652 -1.872 0.321 translocator protein /// 0005739 // mitochondrion 7.122 3.805 n y n ruditapes_s38615 -1.969 0.321 beta-ig-h3 fasciclin domain 6.238 3.169 n y n ruditapes2_c958 -2.224 0.321 mitochondrial ribosomal 4.794 2.156 n y n ruditapes_c24934 4.16 0.321 0.506 2.106 n y n ruditapes_c29675 -2.388 0.321 4.197 1.757 n y n ruditapes_c23704 -2.409 0.321 probable methyltransferase 4.126 1.713 n y n ruditapes_c6465 6.97 0.321 0.22 1.532 n y n ruditapes2_c1506 7.42 0.321 0.201 1.49 n y n ruditapes_c12545 -2.687 0.321 sarcoplasmic calcium-binding protein 3.465 1.289 n y n ruditapes_c14821 -3.394 0.321 2.586 0.762 n y n ruditapes_c4406 -4.606 0.321 cathepsin k /// 0006508 // proteolysis /// 0005515 // protein binding /// 0004197 // cysteine-type endopeptidase activity 1.968 0.427 n y n ruditapes2_c82 -48.923 0.321 keratin associated protein 19-3 1.048 0.021 n y n ruditapes_c1029 1.314 0.322 21.941 28.833 n n n ruditapes2_c2773 -1.414 0.322 20.266 14.328 n n n ruditapes_c17418 -1.453 0.322 17.618 12.123 n n n ruditapes2_c3542 -1.582 0.322 proteasome ( macropain) 26s non- 12 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle 12.18 7.698 n y n ruditapes_c984 1.838 0.322 3.873 7.12 n y n ruditapes_c26142 2.015 0.322 gc-rich sequence dna-binding factor candidate isoform 1 /// 0045449 // regulation of transcription /// 0005829 // cytosol 2.814 5.67 n y n ruditapes_c7374 -2.085 0.322 5.453 2.615 n y n ruditapes_c15590 -2.125 0.322 5.235 2.464 n y n ruditapes_c23274 -2.36 0.322 4.27 1.81 n y n ruditapes2_c3026 -2.566 0.322 3.703 1.443 n y n ruditapes_c16898 14.39 0.322 0.084 1.21 n y n ruditapes_c25804 -2.869 0.322 3.156 1.1 n y n ruditapes_c31781 -3.018 0.322 2.95 0.977 n y n ruditapes_c18247 -3.753 0.322 2.327 0.62 n y n ruditapes_c16855 -4.448 0.322 2.013 0.453 n y n ruditapes_s33796 -5.93 0.322 1.663 0.28 n y n ruditapes_c20379 -9.451 0.322 1.358 0.144 n y n ruditapes_lrc11048 -16.678 0.322 1.176 0.071 n y n ruditapes_c17535 -31.133 0.322 1.082 0.035 n y n ruditapes_c1264 -1.159 0.323 106.385 91.814 n n n ruditapes_c21339 1.664 0.323 betaine-homocysteine methyltransferase /// 0008172 // S-methyltransferase activity 5.75 9.567 n y n ruditapes2_c2880 -1.787 0.323 8.017 4.486 n y n ruditapes_c9988 2.529 0.323 1.454 3.678 n y n ruditapes_c24550 -1.913 0.323 6.67 3.487 n y n ruditapes_lrc37375 -2.03 0.323 5.773 2.844 n y n ruditapes_c27339 -2.146 0.323 5.107 2.38 n y n ruditapes_c14236 -2.455 0.323 3.962 1.614 n y n ruditapes_c28604 -2.965 0.323 3.008 1.014 n y n ruditapes_c25928 ? 0.323 0 0.978 n y n ruditapes_c16508 ? 0.323 0 0.976 n y n ruditapes_c17914 -3.447 0.323 2.519 0.731 n y n ruditapes_c15921 -3.753 0.323 2.316 0.617 n y n ruditapes_c7582 -4.245 0.323 2.078 0.49 n y n ruditapes_c10556 -6.671 0.323 1.561 0.234 n y n ruditapes_c18818 -8.895 0.323 1.385 0.156 n y n ruditapes_c23888 -20.014 0.323 1.139 0.057 n y n ruditapes_c8255 1.393 0.324 glyceraldehyde-3-phosphate dehydrogenase /// 0006950 // response to stress /// 0055114 // oxidation reduction /// 0004365 // glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0009536 // plastid 14.46 20.144 n n n ruditapes_c8015 -1.571 0.324 12.405 7.896 n y n ruditapes_c3522 -1.647 0.324 elongation factor 2 10.381 6.302 n y n ruditapes_c27417 -1.654 0.324 10.219 6.177 n y n ruditapes_c17433 -1.658 0.324 10.152 6.123 n y n ruditapes_c25502 -1.89 0.324 6.851 3.624 n y n ruditapes_c7879 -2.098 0.324 5.331 2.54 n y n ruditapes_c21927 -2.157 0.324 5.036 2.334 n y n ruditapes_c4279 -2.157 0.324 5.036 2.334 n y n ruditapes_c28059 3.672 0.324 0.63 2.315 n y n ruditapes_c20087 -2.187 0.324 novel protein containing sulfotransferase domain /// 0044237 // cellular metabolic process /// 0050896 // response to stimulus 4.887 2.235 n y n ruditapes_c2345 -2.369 0.324 4.204 1.775 n y n ruditapes_c827 -2.404 0.324 4.102 1.706 n y n ruditapes_lrc9904 -2.446 0.324 3.97 1.623 n y n ruditapes2_c669 9.668 0.324 0.138 1.334 n y n ruditapes_lrc38539 21.585 0.324 calponin homolog 0.052 1.116 n y n ruditapes_c29697 -2.891 0.324 3.087 1.068 n y n ruditapes_c16492 ? 0.324 ly6 plaur domain containing 2 0 0.973 n y n ruditapes_c24838 -3.706 0.324 2.338 0.631 n y n ruditapes_c31149 -4.003 0.324 2.178 0.544 n y n ruditapes_c22367 -4.299 0.324 2.048 0.476 n y n ruditapes_c9042 -5.683 0.324 1.693 0.298 n y n ruditapes_c8950 -16.678 0.324 1.169 0.07 n y n ruditapes_c15569 -28.909 0.324 solute carrier 19a3 1.081 0.037 n y n ruditapes_c16037 -? 0.324 0.971 0 n y n ruditapes_c20820 -? 0.324 0.971 0 n y n ruditapes_c7737 -? 0.324 0.971 0 n y n ruditapes2_c740 -1.35 0.325 26.324 19.502 n n n ruditapes_c3254 -1.42 0.325 19.646 13.839 n n n ruditapes2_c26 -1.51 0.325 mitochondrial atp synthase gamma-subunit "/// 0005811 // lipid particle /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0015992 // proton transport /// 0005515 // protein binding /// 0006911 // phagocytosis, engulfment /// 0006754 // ATP biosynthetic process /// 0009792 // embryonic development ending in birth or egg hatching /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 14.557 9.638 n y n ruditapes_c33940 -1.512 0.325 alkaline ceramidase /// 0016787 // hydrolase activity /// 0009987 // cellular process /// 0044464 // cell part 14.486 9.584 n y n ruditapes2_c2949 -1.529 0.325 13.831 9.047 n y n ruditapes_c7040 -1.582 0.325 12.025 7.6 n y n ruditapes_c29414 -1.821 0.325 7.543 4.142 n y n ruditapes_c10155 -1.912 0.325 nadh-ubiquinone oxidoreductase flavoprotein 1 "/// 0040039 // inductive cell migration /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0043054 // dauer exit /// 0010181 // FMN binding /// 0040010 // positive regulation of growth rate /// 0008406 // gonad development /// 0042493 // response to drug /// 0033108 // mitochondrial respiratory chain complex assembly /// 0030421 // defecation /// 0048598 // embryonic morphogenesis /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0040018 // positive regulation of multicellular organism growth /// 0051287 // NAD or NADH binding /// 0043050 // pharyngeal pumping /// 0005747 // mitochondrial respiratory chain complex I /// 0008340 // determination of adult lifespan /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0045333 // cellular respiration /// 0009792 // embryonic development ending in birth or egg hatching" 6.607 3.456 n y n ruditapes2_c1176 -1.922 0.325 6.526 3.396 n y n ruditapes_c18363 -1.946 0.325 6.323 3.25 n y n ruditapes2_c1304 -2.058 0.325 5.533 2.688 n y n ruditapes_lrc32326 7.195 0.325 proteasome maturation protein 0.206 1.481 n y n ruditapes_c2092 -2.894 0.325 collagen a3 3.08 1.064 n y n ruditapes_lrc23438 -3.15 0.325 2.768 0.879 n y n ruditapes_c10085 -3.678 0.325 2.342 0.637 n y n ruditapes_c9635 -3.793 0.325 2.279 0.601 n y n ruditapes_c28290 -4.077 0.325 2.131 0.523 n y n ruditapes_c11413 -4.276 0.325 2.049 0.479 n y n ruditapes_c6239 -14.825 0.325 mitochondrial 39s ribosomal protein l27 (mrp-l27) 1.191 0.08 n y n ruditapes2_lrc5158 -42.252 0.325 1.042 0.025 n y n ruditapes_c1891 -? 0.325 0.968 0 n y n ruditapes2_c191 1.206 0.326 46.621 56.24 n n n ruditapes2_c4186 2.136 0.326 60s ribosomal protein l10 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 2.307 4.927 n y n ruditapes_c9382 -1.745 0.326 8.531 4.889 n y n ruditapes_c7543 -1.773 0.326 8.126 4.584 n y n ruditapes_lrc11037 -1.932 0.326 nadh-ubiquinone oxidoreductase subunit /// 0003954 // NADH dehydrogenase activity 6.422 3.324 n y n ruditapes_c29075 -2.077 0.326 5.416 2.608 n y n ruditapes_c19260 -2.11 0.326 5.236 2.482 n y n ruditapes_c23487 3.672 0.326 0.627 2.303 n y n ruditapes_c4007 -2.36 0.326 4.19 1.775 n y n ruditapes_c7173 -2.709 0.326 3.354 1.238 n y n ruditapes_c22823 -3.079 0.326 2.829 0.919 n y n ruditapes_c19410 -3.447 0.326 heavy polypeptide non-muscle 2.487 0.722 n y n ruditapes_s36595 -4.003 0.326 60s ribosomal protein l9 /// 0044424 // intracellular part 2.157 0.539 n y n ruditapes_lrc34402 -4.448 0.326 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 1.983 0.446 n y n ruditapes2_c1516 -4.448 0.326 1.979 0.445 n y n ruditapes_c18615 -4.726 0.326 1.895 0.401 n y n ruditapes_c705 -6.301 0.326 1.588 0.252 n y n ruditapes_c19357 -28.909 0.326 1.072 0.037 n y n ruditapes_c6594 -1.332 0.327 28.41 21.335 n n n ruditapes2_c1542 -1.462 0.327 chaperonin containing subunit 6a (zeta 1) /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0051082 // unfolded protein binding /// 0006457 // protein folding 16.778 11.478 n n n ruditapes_c13001 1.831 0.327 3.856 7.059 n y n ruditapes_lrc14444 -1.839 0.327 7.282 3.961 n y n ruditapes2_c2986 -2.141 0.327 5.036 2.352 n y n ruditapes_c22532 -2.341 0.327 4.245 1.814 n y n ruditapes_c18300 -2.409 0.327 4.029 1.672 n y n ruditapes_c1954 -2.578 0.327 3.605 1.398 n y n ruditapes_c22498 ? 0.327 cop9 constitutive photomorphogenic homolog subunit 8 /// 0008180 // signalosome /// 0005515 // protein binding 0 0.962 n y n ruditapes_s40437 ? 0.327 ppia protein 0 0.962 n y n ruditapes2_c2972 -3.197 0.327 2.697 0.844 n y n ruditapes_c15248 -5.485 0.327 1.705 0.311 n y n ruditapes_c12052 -6.036 0.327 1.619 0.268 n y n ruditapes_c21006 -7.042 0.327 1.499 0.213 n y n ruditapes_c28064 -? 0.327 keratin associated protein 9-1 0.96 0 n y n ruditapes2_c87 -1.259 0.328 43.106 34.242 n n n ruditapes_c16162 -1.342 0.328 26.934 20.066 n n n ruditapes2_c2716 -1.413 0.328 19.933 14.11 n n n ruditapes2_lrc6060 -1.46 0.328 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.824 11.524 n n n ruditapes_c872 -1.49 0.328 15.274 10.253 n n n ruditapes2_c2183 -1.504 0.328 meiosis-specific nuclear structural protein 1 /// 0005882 // intermediate filament /// 0005635 // nuclear envelope 14.653 9.741 n y n ruditapes2_c1292 -1.604 0.328 11.28 7.031 n y n ruditapes_c28644 -1.604 0.328 11.249 7.013 n y n ruditapes_c14705 -1.67 0.328 9.759 5.844 n y n ruditapes_c28364 -1.73 0.328 8.682 5.02 n y n ruditapes_c19192 2.78 0.328 1.131 3.144 n y n ruditapes_c11252 -2.057 0.328 5.479 2.663 n y n ruditapes2_c3733 -2.582 0.328 lysosomal-associated transmembrane 3.572 1.383 n y n ruditapes_c21195 -2.8 0.328 3.173 1.133 n y n ruditapes_c5078 -3.185 0.328 2.696 0.846 n y n ruditapes_c12078 -3.812 0.328 2.234 0.586 n y n ruditapes_c24609 -5.559 0.328 1.686 0.303 n y n ruditapes2_c1739 -5.782 0.328 1.651 0.286 n y n ruditapes_c14601 -7.413 0.328 1.458 0.197 n y n ruditapes_s36061 -7.783 0.328 1.424 0.183 n y n ruditapes_c18416 -8.895 0.328 1.355 0.152 n y n ruditapes_c11091 -15.566 0.328 1.167 0.075 n y n ruditapes_c23415 -1.549 0.329 12.866 8.308 n y n ruditapes_c23467 1.739 0.329 4.677 8.132 n y n ruditapes_c20974 -1.567 0.329 12.29 7.842 n y n ruditapes_c8098 -1.624 0.329 10.72 6.6 n y n ruditapes_c13058 -1.632 0.329 serine threonine-protein 10.544 6.462 n y n ruditapes_c22511 1.886 0.329 3.426 6.462 n y n ruditapes2_lrc4678 1.975 0.329 atp synthase beta subunit "/// 0005524 // ATP binding /// 0043499 // eukaryotic cell surface binding /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0001525 // angiogenesis /// 0005886 // plasma membrane /// 0015986 // ATP synthesis coupled proton transport /// 0006629 // lipid metabolic process /// 0005754 // mitochondrial proton-transporting ATP synthase, catalytic core /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0051453 // regulation of intracellular pH /// 0042288 // MHC class I protein binding /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 2.927 5.78 n y n ruditapes_c11103 -1.838 0.329 7.227 3.931 n y n ruditapes_lrc31756 -1.876 0.329 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 6.846 3.649 n y n ruditapes_c685 -1.933 0.329 6.32 3.27 n y n ruditapes_c483 -1.971 0.329 6.024 3.056 n y n ruditapes_c31020 -2.161 0.329 4.912 2.273 n y n ruditapes2_lrc4517 -2.224 0.329 4.636 2.085 n y n ruditapes_c26058 -2.263 0.329 4.485 1.982 n y n ruditapes_c17820 -2.575 0.329 3.583 1.391 n y n ruditapes_lrc23383 -2.644 0.329 3.437 1.3 n y n ruditapes_c24666 -2.669 0.329 3.384 1.268 n y n ruditapes2_c2744 -3.262 0.329 tumor necrosis factor member 15 2.612 0.801 n y n ruditapes_c24882 -3.336 0.329 nadh dehydrogenase subunit 2 2.552 0.765 n y n ruditapes_c5234 -5.003 0.329 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 1.798 0.359 n y n ruditapes_c14016 -5.559 0.329 1.678 0.302 n y n ruditapes_c27644 -? 0.329 0.954 0 n y n ruditapes_c10171 -? 0.329 0.953 0 n y n ruditapes_c27475 -? 0.329 0.953 0 n y n ruditapes_lrc12691 -? 0.329 hypothetical protein BRAFLDRAFT_66812 [Branchiostoma floridae] 0.953 0 n y n ruditapes_c26159 -1.378 0.33 22.672 16.451 n n n ruditapes_c4095 1.5 0.33 calponin transgelin /// 0003779 // actin binding /// 0031032 // actomyosin structure organization 9.169 13.757 n y n ruditapes_c9878 -1.456 0.33 16.926 11.623 n n n ruditapes_c15953 -1.629 0.33 10.529 6.463 n y n ruditapes2_c730 -2.197 0.33 4.718 2.148 n y n ruditapes_c27861 -2.224 0.33 4.614 2.075 n y n ruditapes_c26110 4.561 0.33 0.414 1.887 n y n ruditapes2_lrc3955 8.094 0.33 glutathione s-transferase 0.171 1.386 n y n ruditapes_c18713 ? 0.33 actin binding protein 0 0.95 n y n ruditapes_c16729 ? 0.33 0 0.948 n y n ruditapes_c19377 -3.336 0.33 2.541 0.762 n y n ruditapes_c7628 -3.372 0.33 6-pyruvoyltetrahydropterin synthase /// 0005739 // mitochondrion /// 0006559 // L-phenylalanine catabolic process /// 0003874 // 6-pyruvoyltetrahydropterin synthase activity /// 0008270 // zinc ion binding /// 0006729 // tetrahydrobiopterin biosynthetic process /// 0042803 // protein homodimerization activity 2.507 0.744 n y n ruditapes_c18895 -4.942 0.33 1.805 0.365 n y n ruditapes2_lrc4053 -8.895 0.33 1.343 0.151 n y n ruditapes_s35549 -15.566 0.33 1.155 0.074 n y n ruditapes_c11222 -24.461 0.33 1.076 0.044 n y n ruditapes_c28928 -? 0.33 0.948 0 n y n ruditapes_c9170 -1.48 0.331 15.561 10.516 n n n ruditapes_c1702 1.656 0.331 5.682 9.411 n y n ruditapes2_c3735 -1.646 0.331 ferritin-like protein /// 0046914 // transition metal ion binding 10.139 6.16 n y n ruditapes_c25144 -1.663 0.331 9.771 5.877 n y n ruditapes2_c947 2.021 0.331 atp synthase subunit b 2.692 5.44 n y n ruditapes_c10598 -1.864 0.331 6.887 3.696 n y n ruditapes_c19297 -2.224 0.331 4.589 2.064 n y n ruditapes2_c6065 4.368 0.331 ribosomal protein l17 0.444 1.938 n y n ruditapes2_c1629 -2.304 0.331 4.294 1.864 n y n ruditapes2_c127 -2.78 0.331 mitochondrial ribosomal 3.173 1.141 n y n ruditapes_c24575 ? 0.331 0 0.944 n y n ruditapes_c28582 ? 0.331 0 0.944 n y n ruditapes_c23275 -3.283 0.331 2.573 0.784 n y n ruditapes_c24859 -3.812 0.331 choline binding protein a 2.207 0.579 n y n ruditapes_lrc36467 -4.864 0.331 williams beuren syndrome chromosome region 27 1.814 0.373 n y n ruditapes_c7957 -6.354 0.331 1.55 0.244 n y n ruditapes_c9578 -16.678 0.331 1.137 0.068 n y n ruditapes_c17855 -? 0.331 0.945 0 n y n ruditapes_c6720 -? 0.331 0.943 0 n y n ruditapes_lrc32069 -? 0.331 0.943 0 n y n ruditapes2_c3 1.034 0.332 nadh dehydrogenase subunit 4l "1,136.49" "1,175.27" n n n ruditapes2_c1121 1.2 0.332 48.12 57.741 n n n ruditapes_c5126 -1.368 0.332 23.527 17.203 n n n ruditapes_c25074 1.717 0.332 4.849 8.326 n y n ruditapes_c17749 2.163 0.332 fatty acid amide hydrolase /// 0044464 // cell part 2.163 4.679 n y n ruditapes_c16819 -1.853 0.332 6.973 3.763 n y n ruditapes_c3270 -2.058 0.332 5.379 2.614 n y n ruditapes_lrc9931 -2.224 0.332 4.583 2.061 n y n ruditapes2_c3831 5.46 0.332 component of the counting factor complex 0.304 1.662 n y n ruditapes_c29516 -2.402 0.332 3.975 1.655 n y n ruditapes_lrc7499 -2.411 0.332 3.94 1.634 n y n ruditapes_c8300 -2.446 0.332 nicotinamide mononucleotide /// 0009058 // biosynthetic process /// 0016779 // nucleotidyltransferase activity 3.844 1.571 n y n ruditapes2_c615 -2.899 0.332 2.985 1.03 n y n ruditapes_c19917 -3.018 0.332 2.835 0.939 n y n ruditapes_c22674 -3.024 0.332 2.828 0.935 n y n ruditapes_c10894 -4.309 0.332 cg2064- partial 1.981 0.46 n y n ruditapes_c27899 -4.448 0.332 1.928 0.434 n y n ruditapes_c10807 -7.116 0.332 5-oxoprolinase (atp-hydrolysing) /// 0016787 // hydrolase activity 1.461 0.205 n y n ruditapes_lrc11326 -1.439 0.333 17.721 12.318 n n n ruditapes_c8448 -1.623 0.333 10.566 6.512 n y n ruditapes2_c2469 -1.751 0.333 8.197 4.681 n y n ruditapes_c10268 -1.776 0.333 7.838 4.414 n y n ruditapes2_c491 -1.934 0.333 6.218 3.215 n y n ruditapes_c14679 -1.977 0.333 5.884 2.977 n y n ruditapes_s38667 -1.988 0.333 5.817 2.926 n y n ruditapes_lrc19459 -2.019 0.333 5.606 2.777 n y n ruditapes2_c1128 3.244 0.333 0.784 2.543 n y n ruditapes_s40320 -2.42 0.333 3.898 1.611 n y n ruditapes_c31241 -2.467 0.333 3.777 1.531 n y n ruditapes2_c1209 8.544 0.333 0.157 1.34 n y n ruditapes_c22233 -2.869 0.333 3.008 1.048 n y n ruditapes_lrc23128 -2.926 0.333 2.932 1.002 n y n ruditapes_c16055 -3.892 0.333 2.152 0.553 n y n ruditapes_c18428 -4.003 0.333 2.096 0.524 n y n ruditapes_s37845 -6.115 0.333 1.562 0.255 n y n ruditapes_c20774 -24.461 0.333 1.063 0.043 n y n ruditapes_c3835 -1.288 0.334 34.968 27.144 n n n ruditapes2_c2085 -1.334 0.334 27.386 20.533 n n n ruditapes_c12051 1.379 0.334 14.796 20.408 n n n ruditapes_c30420 -1.355 0.334 24.734 18.26 n n n ruditapes_c25421 -1.405 0.334 20.002 14.235 n n n ruditapes_lrc26930 -1.46 0.334 16.4 11.232 n n n ruditapes_c24227 -1.853 0.334 6.917 3.733 n y n ruditapes_c20509 -1.864 0.334 6.804 3.651 n y n ruditapes_c12431 2.473 0.334 1.472 3.64 n y n ruditapes_lrc8202 2.529 0.334 1.388 3.512 n y n ruditapes_c29940 -1.906 0.334 6.432 3.375 n y n ruditapes_c21674 -2.091 0.334 5.163 2.469 n y n ruditapes2_c2694 -2.684 0.334 3.29 1.226 n y n ruditapes_c4989 13.041 0.334 af084441_1calmodulin mutant syncam13 0.09 1.177 n y n ruditapes_c25562 -3.336 0.334 protein 2.501 0.75 n y n ruditapes_c21498 -3.892 0.334 2.142 0.55 n y n ruditapes2_lrc5130 -4.448 0.334 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 1.918 0.431 n y n ruditapes_c13658 -4.942 0.334 1.771 0.358 n y n ruditapes_c15707 -22.238 0.334 1.071 0.048 n y n ruditapes_c9196 -31.133 0.334 wingless related mmtv integration site 2b "/// 0007275 // multicellular organismal development /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway /// 0007267 // cell-cell signaling /// 0004871 // signal transducer activity /// 0005578 // proteinaceous extracellular matrix /// 0005102 // receptor binding" 1.031 0.033 n y n ruditapes_c10467 -? 0.334 0.932 0 n y n ruditapes_c2634 -1.205 0.335 63.268 52.501 n n n ruditapes_c7676 -1.249 0.335 44.818 35.887 n n n ruditapes2_lrc4492 -1.286 0.335 40s ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0051536 // iron-sulfur cluster binding 35.34 27.487 n n n ruditapes_lrc35529 -1.287 0.335 elongation factor 1-delta 35.061 27.245 n n n ruditapes_c15377 1.353 0.335 16.811 22.738 n n n ruditapes2_c1972 1.408 0.335 12.986 18.28 n n n ruditapes2_c2705 -1.483 0.335 15.168 10.232 n n n ruditapes_c485 -1.824 0.335 7.193 3.944 n y n ruditapes_c31081 2.548 0.335 1.36 3.467 n y n ruditapes_lrc27346 2.773 0.335 1.101 3.053 n y n ruditapes_c29308 -1.994 0.335 5.731 2.874 n y n ruditapes2_lrc4935 -2.013 0.335 5.601 2.782 n y n ruditapes_lrc32292 3.288 0.335 elastase 4 precursor 0.755 2.482 n y n ruditapes_c19329 -2.179 0.335 4.698 2.156 n y n ruditapes_c26086 -2.181 0.335 4.69 2.151 n y n ruditapes_c25061 -2.19 0.335 4.657 2.127 n y n ruditapes2_c2319 5.621 0.335 0.286 1.609 n y n ruditapes_c22245 -2.798 0.335 3.09 1.105 n y n ruditapes_lrc22411 ? 0.335 0 0.929 n y n ruditapes_lrc34719 -3.047 0.335 achain control of enzyme activity by an engineered disulfide bond 2.761 0.906 n y n ruditapes_c10549 -3.558 0.335 spectrin repeat nuclear envelope 1 /// 0042692 // muscle cell differentiation /// 0005794 // Golgi apparatus /// 0045211 // postsynaptic membrane /// 0003779 // actin binding /// 0016021 // integral to membrane /// 0005635 // nuclear envelope /// 0005521 // lamin binding /// 0007030 // Golgi organization 2.318 0.652 n y n ruditapes_c4799 -3.577 0.335 2.315 0.647 n y n ruditapes_c13892 -3.964 0.335 2.099 0.53 n y n ruditapes_c3971 -4.299 0.335 1.956 0.455 n y n ruditapes_c24641 -5.93 0.335 1.577 0.266 n y n ruditapes2_c3592 -6.115 0.335 protein 1.553 0.254 n y n ruditapes_c18975 -7.561 0.335 1.405 0.186 n y n ruditapes_c22199 -15.566 0.335 1.133 0.073 n y n ruditapes_c12619 -15.566 0.335 1.13 0.073 n y n ruditapes_c5454 -22.238 0.335 1.065 0.048 n y n ruditapes_c20078 -? 0.335 0.931 0 n y n ruditapes2_c3117 1.231 0.336 heat shock protein 90 /// 0044237 // cellular metabolic process /// 0005515 // protein binding 36.334 44.733 n n n ruditapes_c15045 -1.261 0.336 41.043 32.542 n n n ruditapes2_c2940 -1.495 0.336 14.538 9.722 n n n ruditapes2_c1301 -1.513 0.336 13.817 9.13 n y n ruditapes_lrc15395 -1.659 0.336 9.662 5.823 n y n ruditapes_c15809 -1.668 0.336 9.473 5.68 n y n ruditapes_lrc34120 -1.719 0.336 protein 8.585 4.993 n y n ruditapes_c14050 -1.724 0.336 8.496 4.927 n y n ruditapes_c15127 -1.73 0.336 8.389 4.85 n y n ruditapes_lrc35132 3.672 0.336 atp synthase beta "/// 0044237 // cellular metabolic process /// 0015992 // proton transport /// 0065007 // biological regulation /// 0005515 // protein binding /// 0042625 // ATPase activity, coupled to transmembrane movement of ions /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain" 0.602 2.209 n y n ruditapes_c22094 -2.812 0.336 3.054 1.086 n y n ruditapes_c21049 -2.991 0.336 2.817 0.942 n y n ruditapes_c28506 -3.83 0.336 2.154 0.562 n y n ruditapes_c8990 -3.892 0.336 2.122 0.545 n y n ruditapes_c26874 -4.448 0.336 1.902 0.428 n y n ruditapes_c16966 -4.79 0.336 1.799 0.376 n y n ruditapes2_c1598 -11.119 0.336 1.223 0.11 n y n ruditapes_c23950 -11.119 0.336 1.221 0.11 n y n ruditapes_c14279 -28.909 0.336 1.03 0.036 n y n ruditapes_c12650 -? 0.336 0.924 0 n y n ruditapes2_c757 -1.224 0.337 53.691 43.878 n n n ruditapes_c10392 -1.35 0.337 25.006 18.528 n n n ruditapes_c3909 -1.525 0.337 13.323 8.739 n y n ruditapes_c20215 -1.616 0.337 10.536 6.519 n y n ruditapes_c28593 -1.638 0.337 10.049 6.136 n y n ruditapes_s39182 2.039 0.337 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0030528 // transcription regulator activity /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter 2.557 5.212 n y n ruditapes2_c4591 2.264 0.337 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 1.858 4.207 n y n ruditapes_c18905 2.578 0.337 aldehyde dehydrogenase family subfamily a2 /// 0046292 // formaldehyde metabolic process /// 0055114 // oxidation reduction /// 0042406 // extrinsic to endoplasmic reticulum membrane /// 0005634 // nucleus /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0005829 // cytosol /// 0004030 // aldehyde dehydrogenase [NAD(P)+] activity /// 0004028 // 3-chloroallyl aldehyde dehydrogenase activity /// 0005792 // microsome /// 0004029 // aldehyde dehydrogenase (NAD) activity 1.31 3.378 n y n ruditapes_c9199 -1.966 0.337 5.868 2.984 n y n ruditapes_lrc28589 -1.995 0.337 5.678 2.846 n y n ruditapes_c4230 -1.996 0.337 5.652 2.832 n y n ruditapes_c14022 -2.188 0.337 4.623 2.113 n y n ruditapes2_c1997 -2.489 0.337 3.659 1.47 n y n ruditapes2_c3524 -2.566 0.337 proteasome ( macropain) beta type 4 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005829 // cytosol /// 0005813 // centrosome /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 3.476 1.355 n y n ruditapes_c14147 13.94 0.337 0.082 1.145 n y n ruditapes_c12971 ? 0.337 vitelline membrane outer layer 1 homolog 0 0.922 n y n ruditapes_c8936 ? 0.337 0 0.921 n y n ruditapes_c21110 -3.41 0.337 2.41 0.707 n y n ruditapes_c26915 -3.41 0.337 2.407 0.706 n y n ruditapes_c12413 -5.281 0.337 cathepsin f (c01 family) /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 1.679 0.318 n y n ruditapes_lrc29960 -5.559 0.337 1.625 0.292 n y n ruditapes_lrc8617 -5.559 0.337 transposase [Salmo salar] 1.622 0.292 n y n ruditapes_lrc19292 -7.505 0.337 1.397 0.186 n y n ruditapes_c29307 -7.783 0.337 1.377 0.177 n y n ruditapes_c28879 -11.119 0.337 1.214 0.109 n y n ruditapes_lrc35020 -13.343 0.337 1.16 0.087 n y n ruditapes_c27027 -22.238 0.337 1.059 0.048 n y n ruditapes_c16369 -? 0.337 0.923 0 n y n ruditapes_c25739 -? 0.337 0.92 0 n y n ruditapes_c25044 1.259 0.338 29.284 36.858 n n n ruditapes_lrc23729 -1.687 0.338 nadh dehydrogenase 1 beta subcomplex 9 9.027 5.35 n y n ruditapes_c9159 -1.723 0.338 8.458 4.91 n y n ruditapes_c7076 -1.788 0.338 7.541 4.218 n y n ruditapes2_c2255 -1.806 0.338 7.331 4.06 n y n ruditapes_s38207 -2.409 0.338 3.845 1.596 n y n ruditapes_c16190 -2.584 0.338 3.436 1.329 n y n ruditapes_c28140 -2.737 0.338 3.147 1.15 n y n ruditapes_c28670 -3.401 0.338 2.408 0.708 n y n ruditapes_c34269 -3.918 0.338 saposin-like type region 1 family protein 2.096 0.535 n y n ruditapes_lrc32973 -4.448 0.338 gm2 ganglioside activator protein 1.887 0.424 n y n ruditapes_c18170 -5.115 0.338 1.703 0.333 n y n ruditapes_c10637 -13.343 0.338 1.156 0.087 n y n ruditapes_c25483 -13.343 0.338 1.153 0.086 n y n ruditapes_c15050 -1.49 0.339 14.63 9.82 n n n ruditapes_c11845 -1.491 0.339 14.558 9.761 n n n ruditapes_c3840 1.673 0.339 5.258 8.796 n y n ruditapes_c15946 -1.645 0.339 9.817 5.967 n y n ruditapes_lrc34953 -2.009 0.339 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 5.521 2.747 n y n ruditapes_c28774 3.448 0.339 0.673 2.32 n y n ruditapes2_c2975 -2.224 0.339 4.451 2.001 n y n ruditapes_c17075 5.396 0.339 0.301 1.626 n y n ruditapes_lrc32147 19.786 0.339 von willebrand factor c domain containing 2 0.054 1.063 n y n ruditapes_c16800 ? 0.339 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0 0.913 n y n ruditapes_c22552 -3.047 0.339 2.713 0.89 n y n ruditapes_c3388 -3.336 0.339 2.444 0.733 n y n ruditapes_c10619 -4.587 0.339 cdna sequence bc037703 1.834 0.4 n y n ruditapes_c18708 -5.837 0.339 1.564 0.268 n y n ruditapes_c29575 -10.563 0.339 1.227 0.116 n y n ruditapes_c9244 -1.47 0.34 15.487 10.535 n n n ruditapes2_c3140 -1.498 0.34 heavy polypeptide non-muscle /// 0055001 // muscle cell development /// 0043005 // neuron projection /// 0005515 // protein binding /// 0021591 // ventricular system development /// 0051649 // establishment of localization in cell /// 0031175 // neuron projection development /// 0030036 // actin cytoskeleton organization /// 0006928 // cell motion /// 0051146 // striated muscle cell differentiation /// 0044430 // cytoskeletal part /// 0022607 // cellular component assembly 14.196 9.478 n n n ruditapes2_c2231 -1.726 0.34 8.329 4.825 n y n ruditapes_c11120 -1.829 0.34 7.006 3.829 n y n ruditapes2_c1573 -1.901 0.34 6.303 3.315 n y n ruditapes_c11855 -1.98 0.34 5.69 2.874 n y n ruditapes_c14598 -2.33 0.34 4.056 1.741 n y n ruditapes_c5169 6.595 0.34 0.22 1.451 n y n ruditapes_s39204 ? 0.34 0 0.912 n y n ruditapes_c21437 -3.583 0.34 2.256 0.63 n y n ruditapes_c25462 -11.119 0.34 1.203 0.108 n y n ruditapes_lrc34123 -12.787 0.34 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 1.156 0.09 n y n ruditapes_c8222 -28.909 0.34 1.013 0.035 n y n ruditapes2_c1730 1.474 0.341 9.666 14.245 n n n ruditapes_c29269 -1.56 0.341 11.884 7.618 n y n ruditapes2_c2430 -1.58 0.341 11.273 7.133 n y n ruditapes2_c504 -1.622 0.341 mitochondrial ribosomal protein l11 /// 0030529 // ribonucleoprotein complex 10.235 6.308 n y n ruditapes_c25103 1.908 0.341 3.14 5.991 n y n ruditapes_c6634 -1.709 0.341 8.555 5.005 n y n ruditapes_c26083 -1.795 0.341 7.351 4.096 n y n ruditapes_c26800 2.372 0.341 1.603 3.802 n y n ruditapes2_c2400 -2.353 0.341 complement component q subcomponent-like 1 /// 0005737 // cytoplasm 3.96 1.683 n y n ruditapes_c19170 13.491 0.341 0.084 1.132 n y n ruditapes_c25975 -2.761 0.341 3.075 1.114 n y n ruditapes_c31713 -3.532 0.341 2.281 0.646 n y n ruditapes_c12853 -4.448 0.341 1.859 0.418 n y n ruditapes2_c6199 -5.281 0.341 achain control of enzyme activity by an engineered disulfide bond 1.649 0.312 n y n ruditapes_c23210 -? 0.341 0.906 0 n y n ruditapes_lrc39552 -1.268 0.342 38.156 30.082 n n n ruditapes_c2155 -1.363 0.342 23.01 16.883 n n n ruditapes_c17585 1.665 0.342 5.301 8.826 n y n ruditapes2_c6888 -1.585 0.342 s9 ribosomal protein /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 11.123 7.018 n y n ruditapes_c22256 -1.661 0.342 9.354 5.63 n y n ruditapes_c5038 -1.695 0.342 8.751 5.162 n y n ruditapes_c12204 -1.734 0.342 8.143 4.695 n y n ruditapes_c12662 -1.819 0.342 7.06 3.88 n y n ruditapes_c205 -1.825 0.342 hypothetical protein BRAFLDRAFT_123087 [Branchiostoma floridae] 6.973 3.82 n y n ruditapes_c31660 -2.017 0.342 5.408 2.681 n y n ruditapes2_c2624 -2.094 0.342 4.978 2.377 n y n ruditapes_c4996 -2.438 0.342 3.718 1.525 n y n ruditapes2_c3966 5.936 0.342 0.256 1.518 n y n ruditapes2_c2511 -2.502 0.342 3.546 1.417 n y n ruditapes_c3829 -2.603 0.342 3.335 1.281 n y n ruditapes_c1613 10.343 0.342 0.117 1.209 n y n ruditapes_c28451 -3.018 0.342 2.719 0.901 n y n ruditapes2_c5843 -3.592 0.342 2.237 0.623 n y n ruditapes_c8020 -3.793 0.342 PREDICTED: hypothetical protein [Gallus gallus] 2.118 0.558 n y n ruditapes_c1058 -3.862 0.342 eukaryotic translation initiation factor 4e /// 0000340 // RNA 7-methylguanosine cap binding /// 0006413 // translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0006417 // regulation of translation 2.082 0.539 n y n ruditapes_lrc23299 -4.003 0.342 2.018 0.504 n y n ruditapes_c23728 -4.892 0.342 1.729 0.353 n y n ruditapes_c7165 -6.5 0.342 1.46 0.225 n y n ruditapes_c30339 -8.895 0.342 1.278 0.144 n y n ruditapes_c3990 1.639 0.343 5.652 9.266 n y n ruditapes_c18758 -1.525 0.343 12.99 8.519 n y n ruditapes_c26711 1.761 0.343 4.184 7.369 n y n ruditapes_lrc25717 2.024 0.343 2.548 5.157 n y n ruditapes_c14578 2.231 0.343 1.885 4.205 n y n ruditapes2_c1855 -1.892 0.343 cd209 antigen-like protein a /// 0065007 // biological regulation /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process 6.316 3.338 n y n ruditapes_c399 -2.261 0.343 rab interacting factor /// 0008270 // zinc ion binding /// 0005085 // guanyl-nucleotide exchange factor activity /// 0006944 // membrane fusion 4.23 1.871 n y n ruditapes_c17733 -2.584 0.343 3.359 1.3 n y n ruditapes_c26305 ? 0.343 0 0.899 n y n ruditapes_c23526 -3.089 0.343 2.634 0.853 n y n ruditapes_c28387 -3.336 0.343 2.409 0.722 n y n ruditapes_lrc17892 -5.559 0.343 1.585 0.285 n y n ruditapes_c29742 -6.227 0.343 1.487 0.239 n y n ruditapes_c696 -7.116 0.343 1.395 0.196 n y n ruditapes_lrc25441 -28.909 0.343 ribosomal protein l8 1.001 0.035 n y n ruditapes2_c2733 -1.529 0.344 12.763 8.346 n y n ruditapes_c18998 1.709 0.344 4.708 8.045 n y n ruditapes_c1460 -1.587 0.344 10.983 6.923 n y n ruditapes_c19124 -1.613 0.344 10.338 6.411 n y n ruditapes_c19120 -1.853 0.344 6.641 3.584 n y n ruditapes_c13957 -1.968 0.344 dentin sialophosphoprotein precursor 5.69 2.891 n y n ruditapes_c8508 -2.007 0.344 5.437 2.709 n y n ruditapes_c22581 -2.224 0.344 4.353 1.958 n y n ruditapes_c28450 -2.398 0.344 3.78 1.576 n y n ruditapes_c20788 -4.448 0.344 1.841 0.414 n y n ruditapes_c10215 -4.448 0.344 thermophilic carboxylesterase est2 1.833 0.412 n y n ruditapes_c11315 -14.825 0.344 1.102 0.074 n y n ruditapes2_c2670 1.416 0.345 11.991 16.979 n n n ruditapes_c9148 -1.448 0.345 16.37 11.307 n n n ruditapes2_c3728 -1.481 0.345 14.626 9.874 n n n ruditapes_c1216 -1.507 0.345 13.535 8.981 n y n ruditapes2_c1483 -1.538 0.345 12.417 8.075 n y n ruditapes_c28994 -1.552 0.345 11.951 7.7 n y n ruditapes_c21015 2.056 0.345 2.408 4.949 n y n ruditapes_c11713 -1.747 0.345 7.833 4.483 n y n ruditapes_c23342 2.473 0.345 dopamine transporter /// 0015293 // symporter activity /// 0032501 // multicellular organismal process /// 0015844 // monoamine transport /// 0005886 // plasma membrane /// 0022891 // substrate-specific transmembrane transporter activity 1.407 3.481 n y n ruditapes2_c3000 -1.889 0.345 6.292 3.332 n y n ruditapes_c8477 -2.13 0.345 4.742 2.226 n y n ruditapes_c29904 -2.224 0.345 4.336 1.95 n y n ruditapes_c19710 -2.344 0.345 prolyl-trna synthetase associated region 3.926 1.675 n y n ruditapes_c15884 -2.347 0.345 3.907 1.664 n y n ruditapes_lrc15071 6.146 0.345 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.24 1.475 n y n ruditapes_c3072 -2.584 0.345 h aca ribonucleoprotein complex subunit 3 /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0003676 // nucleic acid binding /// 0006364 // rRNA processing 3.331 1.289 n y n ruditapes_c16149 -2.798 0.345 2.962 1.059 n y n ruditapes_c14686 -2.946 0.345 2.762 0.937 n y n ruditapes_c23757 ? 0.345 0 0.892 n y n ruditapes_c25475 -3.558 0.345 2.226 0.626 n y n ruditapes_c17416 -5.401 0.345 1.602 0.297 n y n ruditapes_c23517 -6.301 0.345 1.468 0.233 n y n ruditapes_c15157 -8.45 0.345 1.287 0.152 n y n ruditapes_c14370 -15.566 0.345 1.087 0.07 n y n ruditapes_c21341 -? 0.345 0.892 0 n y n ruditapes_c30845 -? 0.345 0.892 0 n y n ruditapes_c11439 -1.38 0.346 21.023 15.23 n n n ruditapes_c15686 -1.514 0.346 13.209 8.723 n y n ruditapes_c31275 -1.637 0.346 zinc finger protein 271 (zinc finger protein 7) (zinc finger protein znfphex133) (epstein-barr virus-induced zinc finger protein) (znf-eb) (ct-zfp48) (zinc finger protein dp) (znf-dp) 9.696 5.925 n y n ruditapes2_c3001 -1.695 0.346 8.601 5.075 n y n ruditapes_c20521 -1.91 0.346 6.089 3.188 n y n ruditapes2_c4735 2.91 0.346 0.941 2.737 n y n ruditapes_c23032 -2.152 0.346 4.611 2.143 n y n ruditapes_c15349 -2.423 0.346 3.689 1.522 n y n ruditapes_c12400 -2.512 0.346 3.466 1.38 n y n ruditapes_c35754 -4.077 0.346 egf-like domain-containing protein 1.958 0.48 n y n ruditapes_c21984 -6.036 0.346 1.493 0.247 n y n ruditapes_c10299 -6.671 0.346 1.42 0.213 n y n ruditapes_c25694 -7.783 0.346 1.326 0.17 n y n ruditapes_c7865 -9.266 0.346 1.24 0.134 n y n ruditapes_c11003 -10.007 0.346 1.207 0.121 n y n ruditapes_c15532 -11.119 0.346 1.169 0.105 n y n ruditapes_c201 -1.45 0.347 16.123 11.122 n n n ruditapes2_c2755 -1.463 0.347 15.403 10.531 n n n ruditapes2_c2073 -1.496 0.347 13.912 9.301 n n n ruditapes_c30002 1.82 0.347 3.634 6.612 n y n ruditapes2_c2775 -1.77 0.347 7.497 4.236 n y n ruditapes2_c285 -1.801 0.347 hydroxyacyl glutathione hydrolase 7.108 3.946 n y n ruditapes_c13755 -2.086 0.347 4.899 2.348 n y n ruditapes_c8642 -2.182 0.347 4.471 2.049 n y n ruditapes_c26801 -2.474 0.347 3.544 1.432 n y n ruditapes_lrc34921 9.219 0.347 0.133 1.23 n y n ruditapes_c20986 -2.718 0.347 3.064 1.127 n y n ruditapes_lrc36075 13.491 0.347 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.082 1.105 n y n ruditapes_s38151 -2.753 0.347 3.012 1.094 n y n ruditapes_c28452 ? 0.347 0 0.884 n y n ruditapes2_c219 -3.934 0.347 tnf superfamily member 14 2.009 0.511 n y n ruditapes_c3535 -1.248 0.348 60s acidic ribosomal protein p0 /// 0042254 // ribosome biogenesis /// 0005840 // ribosome 42.676 34.189 n n n ruditapes_lrc11086 -1.356 0.348 23.181 17.092 n n n ruditapes_c30533 -1.629 0.348 9.802 6.017 n y n ruditapes_c4343 -1.7 0.348 8.471 4.983 n y n ruditapes_c20132 -2.068 0.348 actin related protein 2 3 complex subunit 2 /// 0005200 // structural constituent of cytoskeleton /// 0005925 // focal adhesion /// 0003779 // actin binding /// 0005885 // Arp2/3 protein complex /// 0042995 // cell projection /// 0005737 // cytoplasm /// 0030833 // regulation of actin filament polymerization /// 0006928 // cell motion 4.994 2.415 n y n ruditapes_c21556 -2.091 0.348 4.863 2.325 n y n ruditapes_c23372 4.272 0.348 0.431 1.841 n y n ruditapes_c20768 4.407 0.348 0.408 1.798 n y n ruditapes_c2915 -2.286 0.348 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 4.06 1.776 n y n ruditapes_s38743 -2.551 0.348 3.354 1.315 n y n ruditapes_c26274 -2.566 0.348 mediator complex subunit 7 /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0003713 // transcription coactivator activity /// 0005667 // transcription factor complex /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0045941 // positive regulation of transcription 3.325 1.296 n y n ruditapes2_c176 -2.618 0.348 3.222 1.231 n y n ruditapes_c14974 -2.658 0.348 3.148 1.184 n y n ruditapes_lrc32349 10.343 0.348 death-associated protein 0.114 1.182 n y n ruditapes_c11569 -3.428 0.348 2.285 0.667 n y n ruditapes_c24317 -4.003 0.348 1.967 0.491 n y n ruditapes_lrc32828 -4.448 0.348 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 1.805 0.406 n y n ruditapes_c24414 -17.79 0.348 1.045 0.059 n y n ruditapes2_lrc3251 -1.25 0.349 translationally controlled tumor protein /// 0007275 // multicellular organismal development /// 0040007 // growth /// 0005488 // binding 42.132 33.719 n n n ruditapes_lrc32169 -1.253 0.349 protein binding zinc ion binding 41.04 32.745 n n n ruditapes2_c2965 -1.321 0.349 27.459 20.787 n n n ruditapes_lrc24628 1.749 0.349 4.209 7.361 n y n ruditapes_c22346 -1.605 0.349 10.283 6.406 n y n ruditapes_c1964 -1.726 0.349 8.037 4.657 n y n ruditapes_c16870 -1.739 0.349 7.834 4.506 n y n ruditapes_c17604 -1.824 0.349 6.795 3.725 n y n ruditapes_c31613 -1.825 0.349 6.791 3.721 n y n ruditapes_c10820 -1.87 0.349 6.344 3.393 n y n ruditapes_c16479 -1.912 0.349 5.98 3.128 n y n ruditapes_c2466 -2.471 0.349 3.526 1.427 n y n ruditapes_c17595 -2.48 0.349 3.503 1.412 n y n ruditapes_c28142 -2.7 0.349 3.061 1.134 n y n ruditapes_c18234 ? 0.349 0 0.877 n y n ruditapes2_lrc4891 -3.706 0.349 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 2.107 0.569 n y n ruditapes2_lrc3809 -4.324 0.349 tandem repeat galectin 1.841 0.426 n y n ruditapes_c18235 -4.448 0.349 1.802 0.405 n y n ruditapes_c13176 -? 0.349 0.877 0 n y n ruditapes_c26740 -1.193 0.35 66.372 55.638 n n n ruditapes_c19068 -1.341 0.35 24.665 18.391 n n n ruditapes_c21262 1.647 0.35 endo-beta- -glucanase "/// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds /// 0008152 // metabolic process /// 0030246 // carbohydrate binding" 5.384 8.865 n y n ruditapes_c9693 1.755 0.35 4.135 7.256 n y n ruditapes_c13148 -1.827 0.35 6.733 3.686 n y n ruditapes_lrc31098 2.432 0.35 GF24496 [Drosophila ananassae] 1.444 3.512 n y n ruditapes_c15450 -1.946 0.35 5.712 2.935 n y n ruditapes_lrc22132 -1.981 0.35 5.472 2.763 n y n ruditapes_c15812 -1.993 0.35 5.389 2.705 n y n ruditapes_c29770 2.963 0.35 0.889 2.635 n y n ruditapes2_c4815 -2.017 0.35 prefoldin subunit 1 /// 0003700 // transcription factor activity /// 0016272 // prefoldin complex /// 0005886 // plasma membrane /// 0007049 // cell cycle /// 0051082 // unfolded protein binding /// 0006457 // protein folding 5.224 2.59 n y n ruditapes_c25389 -2.273 0.35 4.074 1.792 n y n ruditapes_c3897 -2.644 0.35 stearoyl- desaturase /// 0044425 // membrane part /// 0016491 // oxidoreductase activity /// 0005783 // endoplasmic reticulum /// 0008610 // lipid biosynthetic process 3.148 1.19 n y n ruditapes_c29844 -2.726 0.35 3.011 1.105 n y n ruditapes_c31821 -2.914 0.35 mariner transposase 2.744 0.942 n y n ruditapes_c31676 -3.706 0.35 2.096 0.565 n y n ruditapes_c16788 -3.812 0.35 down syndrome critical region gene 3 /// 0005634 // nucleus /// 0007034 // vacuolar transport /// 0030904 // retromer complex 2.045 0.537 n y n ruditapes_c27950 -6.393 0.35 probable e3 ubiquitin-protein ligase rnf144a-a 1.425 0.223 n y n ruditapes_s35388 -11.86 0.35 1.13 0.095 n y n ruditapes_c12110 -18.902 0.35 1.025 0.054 n y n ruditapes_lrc22787 -22.238 0.35 1.004 0.045 n y n ruditapes_lrc36520 -1.255 0.351 cytoplasmic actin /// 0030029 // actin filament-based process /// 0000910 // cytokinesis /// 0005488 // binding /// 0000003 // reproduction /// 0048513 // organ development /// 0009790 // embryonic development 40.34 32.156 n n n ruditapes_c14129 -1.362 0.351 22.304 16.38 n n n ruditapes_lrc33869 -1.517 0.351 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 12.822 8.453 n y n ruditapes_c30769 -1.525 0.351 12.528 8.214 n y n ruditapes2_c1229 1.7 0.351 4.674 7.946 n y n ruditapes_c16904 -1.561 0.351 11.366 7.281 n y n ruditapes_c7431 -1.709 0.351 riken cdna 2010309e21 gene 8.224 4.813 n y n ruditapes2_c1435 -1.739 0.351 7.779 4.474 n y n ruditapes_c30408 2.184 0.351 1.945 4.249 n y n ruditapes_c8536 -1.913 0.351 5.937 3.103 n y n ruditapes_c29702 -1.934 0.351 5.767 2.982 n y n ruditapes_c873 -2.043 0.351 5.058 2.476 n y n ruditapes_c10790 -2.224 0.351 meiosis-specific nuclear structural 1 /// 0005882 // intermediate filament /// 0005635 // nuclear envelope 4.228 1.901 n y n ruditapes2_c535 -2.289 0.351 -like protein 2 3.995 1.745 n y n ruditapes_c15274 -2.383 0.351 3.711 1.558 n y n ruditapes2_lrc3446 -2.78 0.351 acyl carrier mitochondrial precursor /// 0000036 // acyl carrier activity /// 0044237 // cellular metabolic process /// 0005739 // mitochondrion /// 0008610 // lipid biosynthetic process /// 0048037 // cofactor binding 2.921 1.051 n y n ruditapes_c3384 16.189 0.351 0.065 1.049 n y n ruditapes2_c2179 -2.798 0.351 2.887 1.032 n y n ruditapes_c3995 -2.83 0.351 2.851 1.007 n y n ruditapes_lrc34417 -2.926 0.351 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 2.72 0.93 n y n ruditapes_c28471 ? 0.351 riken cdna 2310021p13 gene 0 0.871 n y n ruditapes_c26294 -3.812 0.351 2.032 0.533 n y n ruditapes_c27159 -4.744 0.351 1.702 0.359 n y n ruditapes_c28212 -5.337 0.351 1.573 0.295 n y n ruditapes_c26876 -15.566 0.351 1.057 0.068 n y n ruditapes_c15340 -42.252 0.351 0.937 0.022 n y n ruditapes_c21392 -? 0.351 0.872 0 n y n ruditapes2_lrc4500 1.225 0.352 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 35.719 43.742 n n n ruditapes2_c1362 1.229 0.352 hla-b associated transcript 1 "/// 0015171 // amino acid transmembrane transporter activity /// 0005634 // nucleus /// 0006406 // mRNA export from nucleus /// 0042802 // identical protein binding /// 0005886 // plasma membrane /// 0008026 // ATP-dependent helicase activity /// 0000398 // nuclear mRNA splicing, via spliceosome" 34.562 42.48 n n n ruditapes2_c3406 -1.389 0.352 19.742 14.208 n n n ruditapes2_c1220 -1.491 0.352 13.792 9.251 n n n ruditapes_c6008 -1.614 0.352 9.985 6.188 n y n ruditapes_c29630 -1.657 0.352 9.056 5.466 n y n ruditapes2_lrc3632 -1.803 0.352 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0006396 // RNA processing /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 6.95 3.855 n y n ruditapes_c8742 -1.935 0.352 5.743 2.968 n y n ruditapes_c18242 -2.087 0.352 4.814 2.307 n y n ruditapes_c26797 -2.203 0.352 4.289 1.947 n y n ruditapes_c27650 -2.224 0.352 4.208 1.892 n y n ruditapes_c11735 -2.259 0.352 4.093 1.812 n y n ruditapes_c31802 -2.846 0.352 2.808 0.987 n y n ruditapes_c16112 ? 0.352 0 0.868 n y n ruditapes_c9781 ? 0.352 catchin protein /// 0016459 // myosin complex 0 0.866 n y n ruditapes_c18681 -3.127 0.352 2.494 0.797 n y n ruditapes_c18420 -3.224 0.352 2.402 0.745 n y n ruditapes_c20363 -3.336 0.352 2.315 0.694 n y n ruditapes_c12017 -4.448 0.352 1.776 0.399 n y n ruditapes_c29595 -7.413 0.352 1.318 0.178 n y n ruditapes_lrc21551 -? 0.352 0.867 0 n y n ruditapes_c2344 -1.564 0.353 11.225 7.179 n y n ruditapes2_c2363 -1.581 0.353 10.738 6.792 n y n ruditapes2_c1496 -1.675 0.353 tpa_inf: variable region-containing chitin-binding protein 2 8.685 5.184 n y n ruditapes_c14844 -1.906 0.353 5.947 3.12 n y n ruditapes_c11553 -2.422 0.353 hemagglutinin amebocyte aggregation factor precursor 3.583 1.479 n y n ruditapes_c10196 -2.446 0.353 3.523 1.44 n y n ruditapes_c4358 -2.641 0.353 3.114 1.179 n y n ruditapes_lrc12373 -2.654 0.353 3.098 1.167 n y n ruditapes_c7299 10.493 0.353 mgc107918 protein /// 0005524 // ATP binding /// 0008033 // tRNA processing 0.11 1.152 n y n ruditapes_c14114 ? 0.353 cutc copper transporter homolog /// 0005507 // copper ion binding /// 0005634 // nucleus /// 0006825 // copper ion transport /// 0005737 // cytoplasm /// 0055070 // copper ion homeostasis 0 0.862 n y n ruditapes_c22991 ? 0.353 0 0.862 n y n ruditapes_c21771 -3.614 0.353 2.126 0.588 n y n ruditapes_c22927 -4.942 0.353 1.642 0.332 n y n ruditapes2_c2468 -5.003 0.353 tripartite motif-containing 28 1.624 0.325 n y n ruditapes_s39262 -6.301 0.353 1.42 0.225 n y n ruditapes_lrc36683 -6.424 0.353 1.402 0.218 n y n ruditapes_c24813 -14.454 0.353 calmodulin /// 0044444 // cytoplasmic part /// 0005819 // spindle /// 0005515 // protein binding /// 0050794 // regulation of cellular process 1.065 0.074 n y n ruditapes2_c600 -1.408 0.354 18.24 12.955 n n n ruditapes2_lrc3174 -1.779 0.354 7.157 4.023 n y n ruditapes_c16292 3.597 0.354 0.58 2.087 n y n ruditapes_c25360 -2.718 0.354 2.971 1.093 n y n ruditapes_c4312 13.491 0.354 0.08 1.073 n y n ruditapes_c20882 ? 0.354 0 0.86 n y n ruditapes_c25672 -3.032 0.354 2.568 0.847 n y n ruditapes_c17887 -3.336 0.354 2.296 0.688 n y n ruditapes_c21957 -3.971 0.354 1.933 0.487 n y n ruditapes_c18769 -5.281 0.354 1.56 0.295 n y n ruditapes_c28099 -10.378 0.354 1.155 0.111 n y n ruditapes_c25208 -22.238 0.354 0.986 0.044 n y n ruditapes_c32053 -? 0.354 0.859 0 n y n ruditapes_c1622 -1.412 0.355 17.869 12.654 n n n ruditapes_lrc34563 1.594 0.355 6.128 9.766 n y n ruditapes2_c56 -1.505 0.355 small nuclear ribonucleoprotein e /// 0000245 // spliceosome assembly /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 13.056 8.677 n y n ruditapes_c1574 -1.686 0.355 down-regulator of transcription 1 /// 0003714 // transcription corepressor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0003887 // DNA-directed DNA polymerase activity 8.44 5.004 n y n ruditapes2_c1123 -1.775 0.355 7.175 4.043 n y n ruditapes2_c2270 -1.818 0.355 6.694 3.683 n y n ruditapes_c15638 -1.889 0.355 6.035 3.195 n y n ruditapes2_c1216 -1.97 0.355 5.416 2.75 n y n ruditapes_c16413 -2.009 0.355 5.175 2.576 n y n ruditapes_c15739 -2.172 0.355 4.365 2.01 n y n ruditapes_c14392 -2.184 0.355 4.313 1.975 n y n ruditapes_c26905 4.047 0.355 0.461 1.868 n y n ruditapes_c15522 -2.33 0.355 neurotrypsin /// 0016787 // hydrolase activity 3.809 1.635 n y n ruditapes_c6131 -2.352 0.355 3.74 1.59 n y n ruditapes_c9919 5.284 0.355 0.292 1.541 n y n ruditapes2_c2651 -2.415 0.355 3.564 1.475 n y n ruditapes2_c6763 -2.628 0.355 vitelline membrane outer layer protein 1 homolog precursor 3.116 1.186 n y n ruditapes_c24409 -2.692 0.355 3 1.115 n y n ruditapes_c22926 -2.761 0.355 2.894 1.048 n y n ruditapes_c31385 ? 0.355 0 0.855 n y n ruditapes2_c926 -3.825 0.355 1.996 0.522 n y n ruditapes_c29774 -4.448 0.355 1.757 0.395 n y n ruditapes_c12371 -4.67 0.355 1.695 0.363 n y n ruditapes2_c1876 -8.895 0.355 1.212 0.136 n y n ruditapes_c11532 -? 0.355 0.856 0 n y n ruditapes_c12172 -1.232 0.356 46.586 37.816 n n n ruditapes_lrc8182 -1.309 0.356 28.469 21.755 n n n ruditapes_c4789 1.603 0.356 5.947 9.531 n y n ruditapes2_lrc4254 1.671 0.356 glutathione s-transferase protein confirmed by transcript evidence /// 0005515 // protein binding 4.93 8.238 n y n ruditapes_c24270 -1.581 0.356 actin related protein 2 3 complex subunit 2 /// 0005200 // structural constituent of cytoskeleton /// 0003899 // DNA-directed RNA polymerase activity /// 0005925 // focal adhesion /// 0003779 // actin binding /// 0030838 // positive regulation of actin filament polymerization /// 0005885 // Arp2/3 protein complex /// 0042995 // cell projection /// 0031252 // cell leading edge /// 0005737 // cytoplasm /// 0006928 // cell motion /// 0030866 // cortical actin cytoskeleton organization /// 0030031 // cell projection assembly /// 0008360 // regulation of cell shape 10.608 6.71 n y n ruditapes_c17097 -1.684 0.356 8.443 5.012 n y n ruditapes_c25054 -1.753 0.356 7.417 4.23 n y n ruditapes2_c2485 -1.768 0.356 7.244 4.097 n y n ruditapes_c15659 2.3 0.356 1.637 3.765 n y n ruditapes_c21756 -1.939 0.356 5.62 2.899 n y n ruditapes_c29716 9.443 0.356 0.125 1.176 n y n ruditapes_c21900 ? 0.356 0 0.853 n y n ruditapes_c19402 -3.583 0.356 uncharacterized conserved secreted protein 2.114 0.59 n y n ruditapes_c23556 -6.227 0.356 1.409 0.226 n y n ruditapes_c22799 -7.227 0.356 1.312 0.182 n y n ruditapes_c28954 -? 0.356 0.852 0 n y n ruditapes_c6120 -1.088 0.357 ubiquitin c /// 0044424 // intracellular part /// 0006464 // protein modification process 292.782 269.034 n n n ruditapes_c24322 -1.376 0.357 20.545 14.936 n n n ruditapes_c16237 -1.531 0.357 12.043 7.865 n y n ruditapes_c341 -1.545 0.357 sin3a-associated 18kda /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0003714 // transcription corepressor activity /// 0000118 // histone deacetylase complex 11.593 7.504 n y n ruditapes_c20127 -1.644 0.357 9.138 5.558 n y n ruditapes_c15225 -1.806 0.357 ribosomal protein l24 /// 0042254 // ribosome biogenesis /// 0022625 // cytosolic large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 6.772 3.75 n y n ruditapes_c27517 3.148 0.357 0.757 2.383 n y n ruditapes2_c521 -2.08 0.357 p23-like protein 4.733 2.275 n y n ruditapes_c13440 -2.268 0.357 3.967 1.749 n y n ruditapes_c23819 -2.78 0.357 2.845 1.023 n y n ruditapes_c28090 ? 0.357 0 0.848 n y n ruditapes2_c6292 -3.018 0.357 2.557 0.847 n y n ruditapes_lrc38580 -3.812 0.357 atp synthase subunit b 1.979 0.519 n y n ruditapes_c25722 -4.448 0.357 1.739 0.391 n y n ruditapes2_lrc5230 -5.93 0.357 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 1.44 0.243 n y n ruditapes_c26440 -8.895 0.357 1.202 0.135 n y n ruditapes_c20948 -12.231 0.357 1.093 0.089 n y n ruditapes_s39894 -12.231 0.357 1.093 0.089 n y n ruditapes2_c2274 -1.336 0.358 24.528 18.363 n n n ruditapes_c3077 -1.354 0.358 22.512 16.631 n n n ruditapes_c21690 -1.486 0.358 13.682 9.207 n n n ruditapes_c8597 -1.517 0.358 12.443 8.201 n y n ruditapes_lrc38889 -1.62 0.358 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0022627 // cytosolic small ribosomal subunit 9.608 5.932 n y n ruditapes_c1669 -1.694 0.358 translocon-associated protein subunit gamma /// 0030176 // integral to endoplasmic reticulum membrane /// 0006613 // cotranslational protein targeting to membrane /// 0005784 // translocon complex /// 0004872 // receptor activity 8.213 4.849 n y n ruditapes_c28724 -1.787 0.358 6.938 3.882 n y n ruditapes_c13736 2.407 0.358 cd209 antigen-like protein d /// 0005488 // binding 1.436 3.457 n y n ruditapes_c24200 -1.94 0.358 5.556 2.864 n y n ruditapes_c3117 2.725 0.358 1.048 2.856 n y n ruditapes_c27701 -2.108 0.358 4.582 2.173 n y n ruditapes_c376 -2.429 0.358 3.494 1.439 n y n ruditapes_c4275 ? 0.358 alcohol dehydrogenase "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0046872 // metal ion binding /// 0008152 // metabolic process" 0 0.844 n y n ruditapes_c19351 -3.113 0.358 2.446 0.786 n y n ruditapes2_c1406 -3.614 0.358 2.077 0.575 n y n ruditapes_c21818 -5.189 0.358 1.552 0.299 n y n ruditapes_c17836 -6.671 0.358 1.348 0.202 n y n ruditapes_c21595 -? 0.358 0.845 0 n y n ruditapes2_c156 -1.193 0.359 64.133 53.772 n n n ruditapes_c14334 -1.745 0.359 7.425 4.256 n y n ruditapes_lrc23421 -1.83 0.359 6.475 3.539 n y n ruditapes2_c1760 3.79 0.359 cd209l1 protein /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0044464 // cell part /// 0007155 // cell adhesion 0.514 1.949 n y n ruditapes_c22558 -2.224 0.359 4.091 1.84 n y n ruditapes_c26940 5.059 0.359 0.307 1.555 n y n ruditapes_c10924 -3.614 0.359 2.073 0.574 n y n ruditapes_c29813 -3.74 0.359 2.001 0.535 n y n ruditapes2_lrc6661 -4.448 0.359 1.728 0.389 n y n ruditapes_c17399 -4.448 0.359 1.725 0.388 n y n ruditapes_c20764 -14.454 0.359 1.041 0.072 n y n ruditapes_c19697 -? 0.359 0.842 0 n y n ruditapes2_c1848 -1.316 0.36 26.902 20.445 n n n ruditapes_c7963 -1.337 0.36 24.07 17.997 n n n ruditapes_c17690 -1.345 0.36 23.203 17.246 n n n ruditapes_c3734 -1.505 0.36 12.805 8.507 n y n ruditapes_c8129 -1.681 0.36 8.337 4.96 n y n ruditapes2_lrc6301 -1.798 0.36 6.777 3.77 n y n ruditapes2_c2305 -1.808 0.36 proteasome subunit beta type-6 precursor /// 0008233 // peptidase activity /// 0044424 // intracellular part 6.658 3.683 n y n ruditapes_c25221 -2.102 0.36 4.57 2.174 n y n ruditapes_lrc36130 -2.153 0.36 DEC-3 [Lymnaea stagnalis] 4.356 2.023 n y n ruditapes_c18319 -2.224 0.36 4.08 1.835 n y n ruditapes_c9760 -2.375 0.36 14-3-3 protein /// 0040010 // positive regulation of growth rate /// 0005515 // protein binding /// 0043053 // dauer entry /// 0018991 // oviposition 3.605 1.518 n y n ruditapes_s35306 -2.439 0.36 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 3.44 1.411 n y n ruditapes_c23649 -2.533 0.36 3.235 1.277 n y n ruditapes_lrc19146 -2.641 0.36 lethal 06225 "/// 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) /// 0015986 // ATP synthesis coupled proton transport /// 0015078 // hydrogen ion transmembrane transporter activity" 3.03 1.147 n y n ruditapes_c18901 12.591 0.36 0.085 1.066 n y n ruditapes_c13469 -2.743 0.36 2.867 1.045 n y n ruditapes_c22390 -2.926 0.36 aldose 1-epimerase 2.627 0.898 n y n ruditapes_c1040 ? 0.36 otolin 1 /// 0005576 // extracellular region /// 0048840 // otolith development 0 0.839 n y n ruditapes2_lrc6596 -3.113 0.36 calmodulin 2 /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 2.424 0.779 n y n ruditapes_c13697 -3.971 0.36 1.891 0.476 n y n ruditapes_c30554 -4.262 0.36 1.775 0.416 n y n ruditapes_c15419 -5.401 0.36 1.506 0.279 n y n ruditapes_c11111 -6.671 0.36 1.34 0.201 n y n ruditapes2_c1388 -6.989 0.36 1.312 0.188 n y n ruditapes_lrc36170 -7.413 0.36 coiled-coil-helix-coiled-coil-helix domain containing 3 1.274 0.172 n y n ruditapes2_c2801 -11.119 0.36 1.107 0.1 n y n ruditapes2_c1735 -1.248 0.361 40.443 32.406 n n n ruditapes_lrc32811 -1.349 0.361 cytochrome c oxidase subunit viic 22.659 16.794 n n n ruditapes_c1695 -1.453 0.361 14.998 10.32 n n n ruditapes_c7797 -1.485 0.361 13.504 9.091 n n n ruditapes_c27598 1.943 0.361 2.708 5.261 n y n ruditapes_c13363 2.361 0.361 1.493 3.525 n y n ruditapes_lrc13054 -1.88 0.361 5.964 3.172 n y n ruditapes_c15445 -1.913 0.361 5.682 2.97 n y n ruditapes_lrc13143 -1.95 0.361 5.411 2.775 n y n ruditapes_c26254 -2.046 0.361 4.846 2.369 n y n ruditapes_c20260 -2.268 0.361 3.896 1.718 n y n ruditapes_c13835 6.895 0.361 0.189 1.3 n y n ruditapes_c22326 -2.997 0.361 2.53 0.844 n y n ruditapes_c12814 -3.224 0.361 dehydrogenase reductase (sdr family) member 1 /// 0005794 // Golgi apparatus /// 0005634 // nucleus /// 0003824 // catalytic activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process /// 0005783 // endoplasmic reticulum 2.317 0.719 n y n ruditapes2_lrc5185 -3.604 0.361 component of the counting factor complex 2.055 0.57 n y n ruditapes_lrc22740 -3.706 0.361 2.002 0.54 n y n ruditapes_c13556 -4.262 0.361 1.768 0.415 n y n ruditapes_c27325 -4.744 0.361 1.632 0.344 n y n ruditapes_c30613 -5.93 0.361 1.417 0.239 n y n ruditapes2_lrc5146 -7.783 0.361 1.247 0.16 n y n ruditapes_c9076 -16.678 0.361 1 0.06 n y n ruditapes_lrc24047 -? 0.361 0.835 0 n y n ruditapes_c25819 -1.512 0.362 12.425 8.22 n y n ruditapes_c26253 -1.594 0.362 10.008 6.278 n y n ruditapes_c22570 1.962 0.362 2.609 5.12 n y n ruditapes2_c2546 -1.676 0.362 8.351 4.983 n y n ruditapes_c8533 -1.687 0.362 8.178 4.848 n y n ruditapes_c25936 -1.73 0.362 7.538 4.358 n y n ruditapes_c8351 2.293 0.362 1.615 3.703 n y n ruditapes_c27452 -1.916 0.362 5.655 2.952 n y n ruditapes_c11260 -1.919 0.362 5.619 2.928 n y n ruditapes_c17428 -1.921 0.362 5.616 2.924 n y n ruditapes_c15515 -2.019 0.362 4.959 2.456 n y n ruditapes_c11279 -2.107 0.362 mitochondrial ribosomal /// 0005840 // ribosome 4.506 2.139 n y n ruditapes_c18264 -2.184 0.362 4.185 1.916 n y n ruditapes_c22651 -2.289 0.362 c14orf45 partial /// 0005813 // centrosome 3.824 1.671 n y n ruditapes_c4772 -2.386 0.362 3.538 1.482 n y n ruditapes2_c2713 -2.496 0.362 3.275 1.312 n y n ruditapes_c21537 -2.822 0.362 2.728 0.966 n y n ruditapes_c27723 -2.926 0.362 chromosome 7 open reading frame 23 2.605 0.89 n y n ruditapes_c25271 -3.855 0.362 1.925 0.499 n y n ruditapes_c14471 -4.448 0.362 1.704 0.383 n y n ruditapes_c14543 -6.671 0.362 1.328 0.199 n y n ruditapes_c30270 -22.238 0.362 0.954 0.043 n y n ruditapes_c5216 -26.685 0.362 0.93 0.035 n y n ruditapes2_c1468 -1.341 0.363 23.376 17.433 n n n ruditapes_c20289 -1.424 0.363 16.503 11.591 n n n ruditapes2_c3637 -1.441 0.363 15.477 10.738 n n n ruditapes2_c2745 -1.454 0.363 mitochondrial ribosomal protein l28 /// 0006412 // translation /// 0045182 // translation regulator activity /// 0003735 // structural constituent of ribosome /// 0005761 // mitochondrial ribosome 14.841 10.207 n n n ruditapes_c16804 -1.53 0.363 11.76 7.685 n y n ruditapes_lrc23829 -1.635 0.363 9.066 5.545 n y n ruditapes2_lrc5210 -1.675 0.363 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 8.357 4.988 n y n ruditapes2_c308 -1.725 0.363 romo1_xentr ame: full=reactive oxygen species modulator 1 short=ros modulator 1 ame: full=protein mgr2 homolog /// 0034614 // cellular response to reactive oxygen species /// 0005739 // mitochondrion /// 0008284 // positive regulation of cell proliferation /// 0016020 // membrane /// 0001302 // replicative cell aging /// 0010670 // positive regulation of oxygen and reactive oxygen species metabolic process 7.577 4.392 n y n ruditapes_c1794 -1.861 0.363 6.073 3.264 n y n ruditapes2_lrc4078 -1.927 0.363 s-crystallin sl11 (major lens polypeptide) 5.54 2.874 n y n ruditapes_c25698 -1.99 0.363 5.12 2.573 n y n ruditapes_c21967 -2.051 0.363 4.775 2.328 n y n ruditapes_c24929 -2.06 0.363 4.719 2.29 n y n ruditapes_c19039 -2.224 0.363 4.015 1.806 n y n ruditapes_c5041 -2.315 0.363 3.725 1.61 n y n ruditapes2_lrc5610 -2.616 0.363 epididymal secretory protein e1 precursor 3.038 1.161 n y n ruditapes_c27864 9.893 0.363 0.113 1.123 n y n ruditapes_c20093 -2.872 0.363 methyltransferase like 2a 2.654 0.924 n y n ruditapes_lrc26380 ? 0.363 0 0.828 n y n ruditapes2_c2296 ? 0.363 peptidoglycan recognition protein 2 precursor /// 0016045 // detection of bacterium /// 0016019 // peptidoglycan receptor activity /// 0016787 // hydrolase activity /// 0050830 // defense response to Gram-positive bacterium 0 0.827 n y n ruditapes_c12442 -3.663 0.363 2.011 0.549 n y n ruditapes_c27549 -3.812 0.363 1.938 0.508 n y n ruditapes_lrc26020 -4.619 0.363 1.651 0.358 n y n ruditapes_c14396 -5.337 0.363 1.494 0.28 n y n ruditapes_s38669 -7.783 0.363 ribosomal protein s23 /// 0006414 // translational elongation /// 0022627 // cytosolic small ribosomal subunit 1.231 0.158 n y n ruditapes_lrc19413 -8.339 0.363 1.201 0.144 n y n ruditapes_s39682 -? 0.363 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0.829 0 n y n ruditapes_c29095 -1.375 0.364 20.014 14.56 n n n ruditapes_c15523 1.681 0.364 predicted protein [Nematostella vectensis] 4.649 7.813 n y n ruditapes_s37612 -1.567 0.364 ribosomal protein l23 /// 0005737 // cytoplasm /// 0009987 // cellular process 10.608 6.768 n y n ruditapes_c18050 1.918 0.364 2.804 5.378 n y n ruditapes2_c3099 -1.653 0.364 toxin i 8.685 5.253 n y n ruditapes_lrc8695 -1.782 0.364 ly-6 neurotoxin-related protein 6.824 3.83 n y n ruditapes_c27448 2.361 0.364 1.475 3.482 n y n ruditapes2_c2995 -1.836 0.364 6.258 3.408 n y n ruditapes_c24955 -1.911 0.364 5.64 2.951 n y n ruditapes_c37434 5.396 0.364 26s protease regulatory subunit 6b /// 0044267 // cellular protein metabolic process /// 0016787 // hydrolase activity /// 0044424 // intracellular part 0.271 1.464 n y n ruditapes2_lrc2298 -2.441 0.364 retinoid- and fatty-acid binding protein cg11064-pa isoform 1 3.377 1.384 n y n ruditapes_c9168 -3.133 0.364 2.368 0.756 n y n ruditapes_c27350 -4.448 0.364 1.689 0.38 n y n ruditapes_c14722 -5.281 0.364 1.502 0.284 n y n ruditapes_c6464 -8.895 0.364 1.169 0.131 n y n ruditapes_c18642 -14.454 0.364 1.017 0.07 n y n ruditapes2_lrc5543 1.175 0.365 actin /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0000281 // cytokinesis after mitosis /// 0005856 // cytoskeleton /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0009792 // embryonic development ending in birth or egg hatching 53.746 63.144 n n n ruditapes2_lrc5255 1.876 0.365 apolipophorin precursor protein 3.015 5.657 n y n ruditapes_c18710 -1.853 0.365 6.094 3.288 n y n ruditapes_c13223 -1.862 0.365 6.003 3.224 n y n ruditapes_c19683 -2.005 0.365 4.989 2.489 n y n ruditapes_s39673 3.298 0.365 0.661 2.18 n y n ruditapes_c7051 -2.107 0.365 4.454 2.114 n y n ruditapes_c30429 4.947 0.365 0.312 1.542 n y n ruditapes_c7701 -2.588 0.365 dual specificity phosphatase 3 (vaccinia virus phosphatase vh1-related) /// 0004725 // protein tyrosine phosphatase activity /// 0008138 // protein tyrosine/serine/threonine phosphatase activity /// 0006470 // protein amino acid dephosphorylation 3.057 1.181 n y n ruditapes2_c605 8.544 0.365 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 0.137 1.174 n y n ruditapes_c25689 -2.607 0.365 3.018 1.158 n y n ruditapes_c8206 -2.669 0.365 piggybac transposable element derived 4 2.919 1.094 n y n ruditapes_c12550 17.088 0.365 0.057 0.978 n y n ruditapes_c26958 ? 0.365 0 0.821 n y n ruditapes_c28827 ? 0.365 0 0.821 n y n ruditapes_c23216 ? 0.365 0 0.819 n y n ruditapes_c6291 -5.337 0.365 1.485 0.278 n y n ruditapes_c11110 -14.454 0.365 1.015 0.07 n y n ruditapes_c5401 1.386 0.366 12.576 17.433 n n n ruditapes_c27158 1.636 0.366 5.19 8.493 n y n ruditapes2_c2920 -1.592 0.366 9.91 6.227 n y n ruditapes_c7563 -1.754 0.366 7.1 4.047 n y n ruditapes_c25023 -1.977 0.366 5.146 2.603 n y n ruditapes_c6297 -1.988 0.366 hypothetical protein XF0051 [Xylella fastidiosa 9a5c] 5.06 2.545 n y n ruditapes_c26850 -2.025 0.366 4.853 2.397 n y n ruditapes2_c2721 -2.041 0.366 4.762 2.333 n y n ruditapes_c31009 -2.089 0.366 4.526 2.167 n y n ruditapes_lrc17761 -2.111 0.366 wdr81 partial 4.428 2.098 n y n ruditapes_c10627 4.834 0.366 nfu1 iron-sulfur cluster scaffold homolog ( cerevisiae) /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0051536 // iron-sulfur cluster binding 0.323 1.561 n y n ruditapes_c23129 -2.454 0.366 3.317 1.352 n y n ruditapes_c27955 -2.541 0.366 3.131 1.232 n y n ruditapes_c15534 ? 0.366 isoform cra_a /// 0005515 // protein binding /// 0030239 // myofibril assembly /// 0016740 // transferase activity /// 0005737 // cytoplasm 0 0.817 n y n ruditapes_c31012 ? 0.366 0 0.816 n y n ruditapes2_c3264 -3.125 0.366 stanniocalcin-like protein 2.354 0.753 n y n ruditapes_c14804 -3.706 0.366 1.961 0.529 n y n ruditapes2_c1745 -3.855 0.366 1.892 0.491 n y n ruditapes_c26653 -5.337 0.366 1.48 0.277 n y n ruditapes_s38068 -6.671 0.366 1.307 0.196 n y n ruditapes_lrc28284 -11.119 0.366 1.077 0.097 n y n ruditapes_c27235 -? 0.366 0.818 0 n y n ruditapes_c24753 -? 0.366 0.816 0 n y n ruditapes_c25043 -1.632 0.367 8.997 5.513 n y n ruditapes_c13669 -1.702 0.367 7.794 4.58 n y n ruditapes_c27542 -1.708 0.367 riia domain-containing protein 7.694 4.506 n y n ruditapes_c12633 -2.01 0.367 4.925 2.45 n y n ruditapes_c3547 -2.009 0.367 4.913 2.445 n y n ruditapes_c18934 -2.178 0.367 contactin-associated protein 4.118 1.89 n y n ruditapes_c17423 3.897 0.367 0.471 1.834 n y n ruditapes_c19959 -2.644 0.367 2.94 1.112 n y n ruditapes_c21445 -2.965 0.367 uba and wwe domain containing 1 /// 0005730 // nucleolus /// 0005515 // protein binding /// 0000209 // protein polyubiquitination /// 0004842 // ubiquitin-protein ligase activity /// 0016574 // histone ubiquitination 2.501 0.844 n y n ruditapes_c28966 -3 0.367 2.463 0.821 n y n ruditapes_c15738 -3.243 0.367 2.248 0.693 n y n ruditapes_c20178 -5.281 0.367 1.481 0.28 n y n ruditapes_c25417 -5.782 0.367 1.404 0.243 n y n ruditapes2_c3874 -1.202 0.368 60s acidic ribosomal protein p0 /// 0030529 // ribonucleoprotein complex /// 0005737 // cytoplasm /// 0009987 // cellular process 56.926 47.377 n n n ruditapes2_c946 -1.689 0.368 nadh dehydrogenase 1 beta subcomplex 9 7.938 4.701 n y n ruditapes_c10146 2.373 0.368 1.429 3.392 n y n ruditapes_c25767 -1.838 0.368 6.144 3.342 n y n ruditapes_c1409 -1.872 0.368 novel protein vertebrate neuropilin and tolloid -like 2 /// 0003824 // catalytic activity /// 0009987 // cellular process 5.852 3.127 n y n ruditapes_lrc13881 -1.899 0.368 5.636 2.967 n y n ruditapes_lrc34238 -1.938 0.368 5.341 2.756 n y n ruditapes_c8239 -2.022 0.368 atp-binding sub-family g member 5 /// 0005488 // binding /// 0016020 // membrane /// 0050896 // response to stimulus 4.821 2.385 n y n ruditapes_c28250 3.448 0.368 0.596 2.055 n y n ruditapes_c11124 -2.128 0.368 4.311 2.026 n y n ruditapes_c5386 3.897 0.368 0.47 1.83 n y n ruditapes_c17398 -2.386 0.368 3.451 1.446 n y n ruditapes_c21760 -2.75 0.368 elegans protein confirmed by transcript evidence 2.76 1.004 n y n ruditapes_c19432 ? 0.368 calcineurin b /// 0016192 // vesicle-mediated transport /// 0005516 // calmodulin binding /// 0004723 // calcium-dependent protein serine/threonine phosphatase activity /// 0005955 // calcineurin complex /// 0001837 // epithelial to mesenchymal transition /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0008021 // synaptic vesicle /// 0008633 // activation of pro-apoptotic gene products /// 0006470 // protein amino acid dephosphorylation /// 0007269 // neurotransmitter secretion /// 0005829 // cytosol /// 0007507 // heart development /// 0005509 // calcium ion binding /// 0008597 // calcium-dependent protein serine/threonine phosphatase regulator activity 0 0.81 n y n ruditapes_s37545 ? 0.368 ribosomal protein s17 0 0.81 n y n ruditapes_c13057 -4.448 0.368 1.663 0.374 n y n ruditapes_c1089 -8.895 0.368 1.149 0.129 n y n ruditapes_c22168 -9.636 0.368 1.115 0.116 n y n ruditapes_lrc32914 -1.1 0.369 beta actin /// 0000281 // cytokinesis after mitosis /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0044424 // intracellular part /// 0009792 // embryonic development ending in birth or egg hatching 216.9 197.206 n n n ruditapes_lrc34105 -1.194 0.369 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 60.761 50.886 n n n ruditapes2_c557 1.328 0.369 16.634 22.094 n n n ruditapes_c14617 1.419 0.369 10.735 15.23 n n n ruditapes_c4328 -1.389 0.369 tgf beta-inducible nuclear protein 1 "/// 0005634 // nucleus /// 0006911 // phagocytosis, engulfment" 18.396 13.243 n n n ruditapes_c21715 1.502 0.369 7.753 11.646 n y n ruditapes_c33042 1.766 0.369 3.72 6.569 n y n ruditapes_c12730 -1.575 0.369 10.171 6.457 n y n ruditapes_c20507 -1.633 0.369 8.901 5.451 n y n ruditapes2_c116 -1.661 0.369 short-chain dehydrogenease reductase /// 0005488 // binding /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 8.398 5.057 n y n ruditapes_c31681 2.13 0.369 1.943 4.139 n y n ruditapes_c24312 -1.757 0.369 6.986 3.977 n y n ruditapes_c30529 -1.76 0.369 6.94 3.942 n y n ruditapes_c12557 -1.998 0.369 4.933 2.469 n y n ruditapes_c19182 -2.107 0.369 4.378 2.078 n y n ruditapes_c4155 -2.177 0.369 4.097 1.881 n y n ruditapes_c4217 17.538 0.369 0.055 0.959 n y n ruditapes2_c1311 ? 0.369 member of ras oncogene family-like 4 0 0.808 n y n ruditapes_c14308 -4.17 0.369 1.743 0.418 n y n ruditapes_c1421 -4.299 0.369 PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] 1.701 0.396 n y n ruditapes_c10130 -5.337 0.369 1.461 0.274 n y n ruditapes_c10453 -? 0.369 0.808 0 n y n ruditapes_c28910 -1.52 0.37 11.767 7.741 n y n ruditapes_lrc35399 1.719 0.37 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 4.126 7.095 n y n ruditapes_c7101 -1.615 0.37 9.209 5.701 n y n ruditapes2_c2643 -1.676 0.37 8.09 4.827 n y n ruditapes_c20457 2.033 0.37 collagen alpha-1 chain 2.251 4.575 n y n ruditapes_c24056 -1.95 0.37 5.233 2.684 n y n ruditapes2_c2800 2.788 0.37 0.94 2.621 n y n ruditapes_c15981 5.996 0.37 0.224 1.342 n y n ruditapes_c8849 -2.641 0.37 2.903 1.099 n y n ruditapes_c13800 -2.718 0.37 2.788 1.026 n y n ruditapes2_c1533 18.887 0.37 triple helix repeat-containing collagen 0.05 0.943 n y n ruditapes_c16763 ? 0.37 0 0.804 n y n ruditapes2_c994 -3.953 0.37 heat shock protein 90 /// 0005524 // ATP binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 1.815 0.459 n y n ruditapes_c18834 -3.971 0.37 1.812 0.456 n y n ruditapes_c26167 -4.765 0.37 1.567 0.329 n y n ruditapes_c18396 -5.718 0.37 1.392 0.243 n y n ruditapes_c3905 -6.671 0.37 thaumatin-like protein /// 0048046 // apoplast /// 0010224 // response to UV-B /// 0009627 // systemic acquired resistance /// 0031540 // regulation of anthocyanin biosynthetic process /// 0005515 // protein binding /// 0016023 // cytoplasmic membrane-bounded vesicle /// 0005618 // cell wall 1.283 0.192 n y n ruditapes_s39749 -11.119 0.37 40s ribosomal protein s30 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006464 // protein modification process 1.059 0.095 n y n ruditapes2_c2076 -33.357 0.37 incilarin a 0.881 0.026 n y n ruditapes_c7117 -? 0.37 0.805 0 n y n ruditapes_c5313 1.344 0.371 15.168 20.385 n n n ruditapes_c7235 -1.344 0.371 general transcription factor iib /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0006413 // translational initiation /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0051101 // regulation of DNA binding /// 0005667 // transcription factor complex /// 0003743 // translation initiation factor activity /// 0008270 // zinc ion binding /// 0008134 // transcription factor binding /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0016251 // general RNA polymerase II transcription factor activity 22.304 16.594 n n n ruditapes_c6082 -1.449 0.371 14.606 10.081 n n n ruditapes_c26716 -1.497 0.371 12.495 8.347 n n n ruditapes_lrc17751 -1.578 0.371 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 10.043 6.365 n y n ruditapes_c989 -1.693 0.371 casein kinase gamma 3 /// 0005524 // ATP binding /// 0001948 // glycoprotein binding /// 0042277 // peptide binding /// 0016055 // Wnt receptor signaling pathway /// 0004674 // protein serine/threonine kinase activity /// 0005625 // soluble fraction /// 0005737 // cytoplasm /// 0000287 // magnesium ion binding /// 0051219 // phosphoprotein binding /// 0046777 // protein amino acid autophosphorylation 7.774 4.591 n y n ruditapes_c14048 -1.977 0.371 5.03 2.544 n y n ruditapes_c14889 -2.278 0.371 3.711 1.629 n y n ruditapes_c25579 5.846 0.371 defensin precursor 0.232 1.355 n y n ruditapes_c30409 -2.436 0.371 3.297 1.354 n y n ruditapes_c22075 -2.809 0.371 2.645 0.942 n y n ruditapes2_c1638 -2.931 0.371 2.494 0.851 n y n ruditapes_c19050 -2.965 0.371 2.463 0.831 n y n ruditapes_c28058 -4.309 0.371 1.682 0.39 n y n ruditapes_c20607 -8.895 0.371 1.132 0.127 n y n ruditapes_c16478 -? 0.371 0.802 0 n y n ruditapes_c16558 -? 0.371 0.801 0 n y n ruditapes_c30903 -? 0.371 0.799 0 n y n ruditapes2_lrc1969 -1.555 0.372 eukaryotic translation initiation factor 2 alpha subunit /// 0003676 // nucleic acid binding 10.614 6.828 n y n ruditapes_c7392 -1.623 0.372 annexin a4 /// 0005856 // cytoskeleton /// 0005488 // binding /// 0006887 // exocytosis 8.994 5.543 n y n ruditapes_c1197 -1.672 0.372 8.069 4.826 n y n ruditapes_c20271 2.136 0.372 1.906 4.07 n y n ruditapes_c3470 -1.775 0.372 6.673 3.759 n y n ruditapes_c19066 -1.797 0.372 6.459 3.594 n y n ruditapes_c15101 -1.877 0.372 5.717 3.045 n y n ruditapes_c3312 -2.269 0.372 3.731 1.644 n y n ruditapes_c4909 -2.485 0.372 3.175 1.277 n y n ruditapes_c16931 -2.628 0.372 2.899 1.103 n y n ruditapes_c27639 ? 0.372 sterol-c5-desaturase (erg3 delta-5-desaturase cerevisiae)-like /// 0050046 // lathosterol oxidase activity /// 0016020 // membrane /// 0044249 // cellular biosynthetic process /// 0006631 // fatty acid metabolic process /// 0000248 // C-5 sterol desaturase activity /// 0008610 // lipid biosynthetic process 0 0.796 n y n ruditapes_c6961 -3.538 0.372 2.003 0.566 n y n ruditapes_c30606 -3.6 0.372 1.97 0.547 n y n ruditapes_c14823 -11.119 0.372 1.051 0.094 n y n ruditapes_lrc37605 -12.231 0.372 1.026 0.084 n y n ruditapes_c3196 -1.443 0.373 14.776 10.239 n n n ruditapes_lrc28192 -1.47 0.373 13.507 9.189 n n n ruditapes_c9952 -1.564 0.373 10.297 6.583 n y n ruditapes_lrc34038 -1.605 0.373 kda midgut partial 9.31 5.8 n y n ruditapes_c26663 -1.647 0.373 8.485 5.151 n y n ruditapes_lrc25410 -1.714 0.373 60s ribosomal protein l10 7.429 4.334 n y n ruditapes2_c2580 2.08 0.373 2.059 4.283 n y n ruditapes_c3352 3.176 0.373 0.693 2.202 n y n ruditapes_c22271 -2.28 0.373 polymerase ii (dna directed) polypeptide "/// 0003899 // DNA-directed RNA polymerase activity /// 0006356 // regulation of transcription from RNA polymerase I promoter /// 0005654 // nucleoplasm /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0006383 // transcription from RNA polymerase III promoter /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0000398 // nuclear mRNA splicing, via spliceosome" 3.676 1.612 n y n ruditapes_c13779 -2.482 0.373 3.168 1.276 n y n ruditapes_c16207 -2.7 0.373 2.774 1.027 n y n ruditapes_c3215 -2.711 0.373 universal stress protein 2.757 1.017 n y n ruditapes_c17049 -2.83 0.373 2.594 0.916 n y n ruditapes_c14561 ? 0.373 0 0.794 n y n ruditapes_c23998 -3.753 0.373 cytochrome family subfamily polypeptide 1 /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process /// 0044464 // cell part 1.886 0.503 n y n ruditapes_c21940 -5.93 0.373 1.349 0.227 n y n ruditapes_c14564 -? 0.373 0.795 0 n y n ruditapes_lrc19771 -? 0.373 0.794 0 n y n ruditapes2_lrc3505 -1.218 0.374 beta 2 /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 48.211 39.587 n n n ruditapes_c6919 -1.272 0.374 32.587 25.612 n n n ruditapes2_c1009 1.307 0.374 18.37 24.013 n n n ruditapes_c4289 -1.298 0.374 28.036 21.604 n n n ruditapes_c3054 -1.314 0.374 25.698 19.562 n n n ruditapes_c26 -1.385 0.374 18.351 13.246 n n n ruditapes_c6996 -1.48 0.374 13.038 8.809 n n n ruditapes_c16311 1.713 0.374 myo-inositol oxygenase "/// 0050113 // inositol oxygenase activity /// 0055114 // oxidation reduction /// 0016234 // inclusion body /// 0016651 // oxidoreductase activity, acting on NADH or NADPH /// 0004033 // aldo-keto reductase activity /// 0050661 // NADP or NADPH binding /// 0005737 // cytoplasm /// 0005506 // iron ion binding /// 0019310 // inositol catabolic process" 4.119 7.057 n y n ruditapes_c29403 -1.641 0.374 8.553 5.211 n y n ruditapes_c15837 -1.695 0.374 7.654 4.515 n y n ruditapes_c6215 -1.713 0.374 7.386 4.311 n y n ruditapes_c3236 -1.83 0.374 6.08 3.323 n y n ruditapes2_c4504 -1.856 0.374 5.829 3.141 n y n ruditapes_c2256 -2.047 0.374 4.577 2.236 n y n ruditapes_c29943 -2.065 0.374 4.492 2.175 n y n ruditapes_c12997 -2.093 0.374 4.36 2.083 n y n ruditapes_c17295 3.597 0.374 0.535 1.924 n y n ruditapes_c12445 5.696 0.374 sorting nexin 12 0.239 1.36 n y n ruditapes_c14831 -2.804 0.374 2.623 0.936 n y n ruditapes_c24661 -2.919 0.374 2.486 0.852 n y n ruditapes_c30441 ? 0.374 0 0.791 n y n ruditapes2_lrc1626 -3.78 0.374 1.863 0.493 n y n ruditapes_c18222 -5.337 0.374 1.431 0.268 n y n ruditapes_c29476 -8.895 0.374 1.12 0.126 n y n ruditapes_c16625 -20.014 0.374 0.922 0.046 n y n ruditapes_c8829 -1.318 0.375 conserved plasmodium protein 24.931 18.91 n n n ruditapes_c15526 1.541 0.375 preprotein translocase secy subunit "/// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0008258 // head involution /// 0042335 // cuticle development /// 0016021 // integral to membrane /// 0007391 // dorsal closure /// 0005784 // translocon complex /// 0008219 // cell death" 6.627 10.212 n y n ruditapes2_c197 -1.577 0.375 9.884 6.267 n y n ruditapes_c14443 -1.635 0.375 8.636 5.282 n y n ruditapes_c5358 -1.724 0.375 7.209 4.182 n y n ruditapes_c24966 3.541 0.375 nmda receptor regulated 1 "/// 0006355 // regulation of transcription, DNA-dependent /// 0005634 // nucleus /// 0005488 // binding" 0.55 1.947 n y n ruditapes_c27729 -2.409 0.375 3.302 1.371 n y n ruditapes_c8303 ? 0.375 sialic acid binding lectin 0 0.786 n y n ruditapes_lrc38705 -4.262 0.375 nadh dehydrogenase 1 beta subcomplex 3 /// 0005739 // mitochondrion /// 0016020 // membrane 1.667 0.391 n y n ruditapes_c15327 -7.783 0.375 1.172 0.151 n y n ruditapes_c12117 -10.007 0.375 1.074 0.107 n y n ruditapes_c22332 -? 0.375 atp-binding sub-family a member 2 "/// 0005524 // ATP binding /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0032383 // regulation of intracellular cholesterol transport /// 0042632 // cholesterol homeostasis /// 0048545 // response to steroid hormone stimulus /// 0042493 // response to drug /// 0006629 // lipid metabolic process /// 0005815 // microtubule organizing center /// 0016021 // integral to membrane /// 0016023 // cytoplasmic membrane-bounded vesicle /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0043190 // ATP-binding cassette (ABC) transporter complex /// 0005765 // lysosomal membrane" 0.787 0 n y n ruditapes_c18936 -1.282 0.376 30.485 23.788 n n n ruditapes2_c1268 1.483 0.376 8.071 11.966 n n n ruditapes_c21569 1.755 0.376 3.702 6.494 n y n ruditapes_c53 -1.765 0.376 nadh dehydrogenase 1 beta 19kda /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle 6.69 3.791 n y n ruditapes2_c67 -2.073 0.376 apaf1 interacting protein /// 0043066 // negative regulation of apoptosis /// 0046872 // metal ion binding 4.404 2.124 n y n ruditapes_c25996 -2.085 0.376 4.358 2.09 n y n ruditapes_c20815 -2.12 0.376 ef-hand calcium binding domain 6 4.204 1.983 n y n ruditapes_lrc22603 -2.341 0.376 3.455 1.476 n y n ruditapes_lrc35823 11.242 0.376 nucleoside diphosphate kinase /// 0044444 // cytoplasmic part /// 0032501 // multicellular organismal process /// 0005515 // protein binding /// 0043229 // intracellular organelle /// 0000166 // nucleotide binding /// 0016740 // transferase activity /// 0009117 // nucleotide metabolic process /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 0.091 1.028 n y n ruditapes_c2940 -2.935 0.376 2.438 0.831 n y n ruditapes_c13584 ? 0.376 ribonuclease p 40kda subunit /// 0005634 // nucleus /// 0005515 // protein binding /// 0016787 // hydrolase activity 0 0.784 n y n ruditapes_c29590 ? 0.376 0 0.784 n y n ruditapes_c31375 ? 0.376 0 0.784 n y n ruditapes_c28391 -3.494 0.376 hypothetical protein BRAFLDRAFT_68028 [Branchiostoma floridae] 1.993 0.57 n y n ruditapes_c21800 -3.614 0.376 1.932 0.535 n y n ruditapes_c3959 -5.281 0.376 1.429 0.271 n y n ruditapes_c23944 -6.301 0.376 1.288 0.204 n y n ruditapes_c6373 -7.042 0.376 1.221 0.173 n y n ruditapes_c13764 -8.45 0.376 1.133 0.134 n y n ruditapes_c7744 -16.678 0.376 0.943 0.057 n y n ruditapes_c24466 -? 0.376 0.785 0 n y n ruditapes_c10417 -1.234 0.377 41.946 33.988 n n n ruditapes_c8348 1.303 0.377 predicted protein [Nematostella vectensis] 18.692 24.347 n n n ruditapes2_c1577 -1.37 0.377 19.348 14.121 n n n ruditapes_c30945 -1.467 0.377 13.428 9.154 n n n ruditapes_c29830 -1.588 0.377 9.548 6.011 n y n ruditapes_lrc36108 1.816 0.377 atpase mitochondrial 3.232 5.87 n y n ruditapes_c14942 -1.749 0.377 galactose mutarotase /// 0003824 // catalytic activity 6.857 3.921 n y n ruditapes_c28343 -2.044 0.377 4.526 2.214 n y n ruditapes_c31624 -2.173 0.377 3.971 1.828 n y n ruditapes2_c736 -2.224 0.377 peptidylprolyl isomerase b (cyclophilin b) /// 0005783 // endoplasmic reticulum /// 0051082 // unfolded protein binding /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0005788 // endoplasmic reticulum lumen /// 0051169 // nuclear transport 3.794 1.706 n y n ruditapes_c26730 5.846 0.377 0.226 1.323 n y n ruditapes_c11488 -2.594 0.377 2.902 1.119 n y n ruditapes_c10926 -2.965 0.377 2.402 0.81 n y n ruditapes_c28528 -2.965 0.377 2.397 0.808 n y n ruditapes_c11777 ? 0.377 mitochondrial import inner membrane translocase subunit /// 0005739 // mitochondrion /// 0006886 // intracellular protein transport /// 0040018 // positive regulation of multicellular organism growth /// 0040011 // locomotion /// 0040035 // hermaphrodite genitalia development /// 0009792 // embryonic development ending in birth or egg hatching 0 0.779 n y n ruditapes_c13988 ? 0.377 0 0.779 n y n ruditapes_c19176 -3.336 0.377 domain containing 3 2.087 0.626 n y n ruditapes_c16766 -5.189 0.377 1.436 0.277 n y n ruditapes_c21718 -7.783 0.377 1.165 0.15 n y n ruditapes_c7898 -15.566 0.377 0.952 0.061 n y n ruditapes_c38336 -22.238 0.377 0.894 0.04 n y n ruditapes_c14311 -1.352 0.378 20.889 15.453 n n n ruditapes_c221 -1.519 0.378 h aca ribonucleoprotein complex subunit 3 /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0003676 // nucleic acid binding /// 0006364 // rRNA processing 11.398 7.504 n y n ruditapes2_c2813 -1.74 0.378 6.94 3.99 n y n ruditapes_c16532 -1.774 0.378 6.537 3.684 n y n ruditapes_c20349 2.456 0.378 dolichyl-phosphate mannosyltransferase polypeptide regulatory subunit 1.253 3.077 n y n ruditapes2_lrc4734 4.872 0.378 serine proteinase 0.303 1.475 n y n ruditapes_lrc32421 -2.385 0.378 beta isoform cra_a 3.318 1.391 n y n ruditapes_c14467 5.546 0.378 0.245 1.361 n y n ruditapes_s39102 ? 0.378 0 0.777 n y n ruditapes_c14803 -3.475 0.378 1.993 0.574 n y n ruditapes_c26861 -3.587 0.378 1.923 0.536 n y n ruditapes_c12608 -5.559 0.378 1.373 0.247 n y n ruditapes_c22755 -7.783 0.378 1.157 0.149 n y n ruditapes_c28025 -15.566 0.378 0.947 0.061 n y n ruditapes_c13053 -22.238 0.378 0.892 0.04 n y n ruditapes_c1781 -1.163 0.379 80.597 69.323 n n n ruditapes_c12891 -1.435 0.379 14.82 10.327 n n n ruditapes_c13483 -1.522 0.379 11.261 7.401 n y n ruditapes_c11186 -1.658 0.379 8.105 4.889 n y n ruditapes_c1293 -1.848 0.379 5.794 3.136 n y n ruditapes_c14558 -1.946 0.379 5.065 2.603 n y n ruditapes_c10697 -2.059 0.379 4.418 2.146 n y n ruditapes_c25847 -2.52 0.379 3.011 1.195 n y n ruditapes_c20301 -2.621 0.379 2.825 1.078 n y n ruditapes2_lrc3578 15.739 0.379 0.059 0.936 n y n ruditapes2_lrc3280 -2.869 0.379 2.49 0.868 n y n ruditapes_c18093 -2.965 0.379 2.382 0.803 n y n ruditapes_c31483 ? 0.379 0 0.774 n y n ruditapes_c23714 ? 0.379 0 0.773 n y n ruditapes_c21658 -3.032 0.379 2.315 0.763 n y n ruditapes_c30780 -3.291 0.379 2.102 0.639 n y n ruditapes_c1155 -3.336 0.379 2.067 0.62 n y n ruditapes_c21981 -5.718 0.379 1.343 0.235 n y n ruditapes2_c5788 -11.119 0.379 wsc domain protein 1.02 0.092 n y n ruditapes_c11822 -24.461 0.379 0.877 0.036 n y n ruditapes_c16348 -? 0.379 0.775 0 n y n ruditapes_c15436 1.451 0.38 8.96 13.001 n n n ruditapes_c31089 1.635 0.38 4.901 8.012 n y n ruditapes_c1837 -1.554 0.38 polymerase ii (dna directed) polypeptide 25kda /// 0006366 // transcription from RNA polymerase II promoter /// 0005654 // nucleoplasm 10.26 6.602 n y n ruditapes2_c4569 -1.656 0.38 elongation factor 1 alpha /// 0006414 // translational elongation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005737 // cytoplasm /// 0003746 // translation elongation factor activity 8.091 4.885 n y n ruditapes_c10298 -1.695 0.38 7.471 4.408 n y n ruditapes_c31533 -1.706 0.38 7.309 4.284 n y n ruditapes2_c2839 2.305 0.38 1.477 3.405 n y n ruditapes_c30694 2.862 0.38 0.851 2.434 n y n ruditapes2_lrc6835 -2.012 0.38 4.641 2.307 n y n ruditapes_c21782 -2.065 0.38 4.373 2.118 n y n ruditapes_c18720 -2.093 0.38 4.239 2.025 n y n ruditapes_c24683 -2.273 0.38 3.586 1.577 n y n ruditapes_c11718 -2.578 0.38 2.893 1.123 n y n ruditapes2_lrc1962 11.242 0.38 ribosomal protein s7 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.09 1.01 n y n ruditapes_c5299 12.591 0.38 0.078 0.979 n y n ruditapes2_c3919 15.289 0.38 fkbp-type peptidyl-prolyl cis-trans isomerase /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.061 0.94 n y n ruditapes_c26330 -2.965 0.38 2.369 0.799 n y n ruditapes_c24670 -3.336 0.38 2.064 0.619 n y n ruditapes_c9979 -8.895 0.38 1.093 0.123 n y n ruditapes_c12566 -13.343 0.38 0.969 0.073 n y n ruditapes_c13852 -26.685 0.38 cg34127 cg34127-pa /// 0010033 // response to organic substance /// 0004091 // carboxylesterase activity /// 0048731 // system development /// 0006581 // acetylcholine catabolic process /// 0048468 // cell development /// 0044464 // cell part 0.863 0.032 n y n ruditapes_c26724 -? 0.38 0.771 0 n y n ruditapes2_c1417 -1.286 0.381 29.074 22.609 n n n ruditapes2_c2494 1.318 0.381 16.778 22.116 n n n ruditapes_c1440 -1.359 0.381 19.925 14.664 n n n ruditapes_c16660 -1.579 0.381 9.572 6.06 n y n ruditapes_c21356 -1.911 0.381 non-erythrocytic 1 isoform 2 /// 0005200 // structural constituent of cytoskeleton /// 0044267 // cellular protein metabolic process /// 0008091 // spectrin /// 0005730 // nucleolus /// 0003779 // actin binding /// 0007179 // transforming growth factor beta receptor signaling pathway 5.245 2.745 n y n ruditapes_c19312 -1.923 0.381 5.156 2.681 n y n ruditapes2_c3128 2.871 0.381 0.839 2.41 n y n ruditapes_c19226 -1.988 0.381 4.764 2.396 n y n ruditapes_c12709 3.597 0.381 0.518 1.864 n y n ruditapes2_lrc5922 -2.168 0.381 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 3.921 1.808 n y n ruditapes_c27541 -2.224 0.381 3.723 1.674 n y n ruditapes_c4848 -2.594 0.381 2.856 1.101 n y n ruditapes_c2753 12.142 0.381 dihydropteridine reductase /// 0016491 // oxidoreductase activity 0.081 0.983 n y n ruditapes_lrc26129 -2.997 0.381 2.331 0.778 n y n ruditapes_c24945 ? 0.381 0 0.769 n y n ruditapes_c30817 ? 0.381 0 0.766 n y n ruditapes_c25262 -3.401 0.381 2.01 0.591 n y n ruditapes2_c625 -3.681 0.381 1.852 0.503 n y n ruditapes_c17677 -3.812 0.381 1.791 0.47 n y n ruditapes_c30452 -5.003 0.381 1.444 0.289 n y n ruditapes_c14439 -5.115 0.381 protein 1.423 0.278 n y n ruditapes_c21824 -6.671 0.381 1.227 0.184 n y n ruditapes_c18425 -? 0.381 0.767 0 n y n ruditapes_c9585 -1.188 0.382 60.598 50.991 n n n ruditapes2_c52 -1.275 0.382 31.113 24.408 n n n ruditapes_c16630 -1.349 0.382 20.775 15.399 n n n ruditapes_c758 -1.378 0.382 18.219 13.217 n n n ruditapes_c5959 -1.598 0.382 9.129 5.711 n y n ruditapes_c21804 -1.773 0.382 6.426 3.623 n y n ruditapes_c16832 -1.826 0.382 upf0139 membrane protein c19orf56 homolog /// 0016021 // integral to membrane 5.893 3.227 n y n ruditapes_c12165 4.227 0.382 0.38 1.608 n y n ruditapes_c4596 -2.274 0.382 eukaryotic translation initiation factor subunit h /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0032403 // protein complex binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0005792 // microsome 3.555 1.563 n y n ruditapes_c11235 -2.324 0.382 3.42 1.472 n y n ruditapes_c28330 -2.383 0.382 3.269 1.372 n y n ruditapes2_c995 -2.449 0.382 3.111 1.27 n y n ruditapes_c964 -2.551 0.382 2.91 1.141 n y n ruditapes_c11771 ? 0.382 0 0.763 n y n ruditapes_c24626 -3.459 0.382 1.967 0.569 n y n ruditapes_c8272 -4.262 0.382 1.618 0.38 n y n ruditapes_c25245 -4.448 0.382 1.569 0.353 n y n ruditapes_c22647 -5.083 0.382 1.427 0.281 n y n ruditapes_lrc39953 -5.083 0.382 1.424 0.28 n y n ruditapes_c14556 -11.119 0.382 1.009 0.091 n y n ruditapes_c23084 -20.014 0.382 0.892 0.045 n y n ruditapes_c28074 -? 0.382 0.763 0 n y n ruditapes_c29905 -1.406 0.383 16.219 11.533 n n n ruditapes_c25046 -1.431 0.383 14.808 10.347 n n n ruditapes_c1773 -1.486 0.383 adipose differentiation-related protein 12.272 8.256 n n n ruditapes_c27420 -1.502 0.383 11.731 7.811 n y n ruditapes_c9203 1.758 0.383 3.575 6.284 n y n ruditapes2_c1858 -1.653 0.383 8.04 4.864 n y n ruditapes2_c2381 2.288 0.383 1.49 3.408 n y n ruditapes_c11300 -1.967 0.383 4.833 2.457 n y n ruditapes_c19776 3.098 0.383 0.702 2.173 n y n ruditapes_c450 -2.195 0.383 3.791 1.727 n y n ruditapes_c20505 4.16 0.383 hypothetical protein BRAFLDRAFT_210907 [Branchiostoma floridae] /// 0008236 // serine-type peptidase activity 0.39 1.624 n y n ruditapes_c14908 -2.289 0.383 3.505 1.531 n y n ruditapes_lrc20469 -2.511 0.383 2.976 1.185 n y n ruditapes_c7949 -2.732 0.383 2.613 0.957 n y n ruditapes2_c20 -2.78 0.383 protein 2.548 0.917 n y n ruditapes_c25860 -2.919 0.383 2.39 0.819 n y n ruditapes_c21777 ? 0.383 0 0.762 n y n ruditapes_c30648 -4.942 0.383 1.444 0.292 n y n ruditapes_lrc35985 -5.718 0.383 1.32 0.231 n y n ruditapes_c12213 -11.119 0.383 1.004 0.09 n y n ruditapes_c14725 -1.26 0.384 33.916 26.92 n n n ruditapes_c21514 -1.546 0.384 10.325 6.68 n y n ruditapes_lrc10363 -1.607 0.384 8.85 5.507 n y n ruditapes_c16824 -1.63 0.384 PREDICTED: hypothetical protein [Mus musculus] 8.396 5.151 n y n ruditapes2_c2941 -1.649 0.384 8.064 4.891 n y n ruditapes_c380 -1.805 0.384 riken cdna 3100002j23 partial 6.058 3.357 n y n ruditapes_c8581 -1.887 0.384 5.36 2.841 n y n ruditapes_c20276 2.594 0.384 1.059 2.746 n y n ruditapes_lrc35849 -1.926 0.384 5.073 2.634 n y n ruditapes_c12319 -2.059 0.384 4.324 2.1 n y n ruditapes_c7251 -2.111 0.384 4.099 1.942 n y n ruditapes2_c1272 -2.623 0.384 2.765 1.054 n y n ruditapes_c12975 -2.78 0.384 2.545 0.916 n y n ruditapes_lrc25849 ? 0.384 0 0.757 n y n ruditapes_c12788 -3.291 0.384 2.059 0.626 n y n ruditapes_c18929 -3.706 0.384 1.819 0.491 n y n ruditapes_c17871 -3.953 0.384 primary mesenchyme specific protein msp130-related-2 1.716 0.434 n y n ruditapes_lrc23236 -3.953 0.384 1.714 0.434 n y n ruditapes_c24824 -5.083 0.384 1.414 0.278 n y n ruditapes2_c1911 -5.189 0.384 1.393 0.269 n y n ruditapes_c21659 -24.461 0.384 0.859 0.035 n y n ruditapes_c20621 -24.461 0.384 calmodulin /// 0044237 // cellular metabolic process /// 0005488 // binding 0.857 0.035 n y n ruditapes_c21151 -? 0.384 protein 0.759 0 n y n ruditapes_c26767 -? 0.384 0.758 0 n y n ruditapes_lrc11317 1.246 0.385 ribosomal protein l21 /// 0005622 // intracellular 26.412 32.906 n n n ruditapes_c3005 -1.311 0.385 24.851 18.96 n n n ruditapes_c4414 -1.382 0.385 17.716 12.817 n n n ruditapes_lrc34584 -1.4 0.385 atp synthase subunit b 16.514 11.798 n n n ruditapes_c14360 -1.824 0.385 5.845 3.204 n y n ruditapes_c20273 -1.934 0.385 5.013 2.592 n y n ruditapes_c24534 -2.291 0.385 3.459 1.51 n y n ruditapes2_c2412 -2.313 0.385 cpyc type 3.403 1.471 n y n ruditapes_lrc31638 -3.065 0.385 2.23 0.728 n y n ruditapes_c22809 -3.212 0.385 2.104 0.655 n y n ruditapes_c7004 -4.726 0.385 1.482 0.314 n y n ruditapes_s38787 -4.726 0.385 1.482 0.314 n y n ruditapes_c10271 -4.942 0.385 1.436 0.291 n y n ruditapes_c29459 -5.559 0.385 1.332 0.24 n y n ruditapes_lrc10762 -6.036 0.385 1.267 0.21 n y n ruditapes2_lrc5038 -6.393 0.385 translationally controlled tumor protein 1.23 0.192 n y n ruditapes_c306 -8.006 0.385 PREDICTED: hypothetical protein [Danio rerio] 1.112 0.139 n y n ruditapes_lrc34326 -8.26 0.385 1.099 0.133 n y n ruditapes2_c1460 -14.084 0.385 0.937 0.067 n y n ruditapes_c16994 -20.014 0.385 0.878 0.044 n y n ruditapes_c19092 -? 0.385 0.754 0 n y n ruditapes_lrc33087 -1.469 0.386 mitochondrial atp synthase f chain /// 0005811 // lipid particle 12.829 8.736 n n n ruditapes_c16594 -1.475 0.386 12.543 8.501 n n n ruditapes_c5577 -1.715 0.386 7.003 4.084 n y n ruditapes_c29717 -1.853 0.386 5.581 3.012 n y n ruditapes_c10534 -1.927 0.386 5.036 2.613 n y n ruditapes_c7759 -2.224 0.386 3.66 1.646 n y n ruditapes_c20397 4.16 0.386 0.385 1.603 n y n ruditapes_c4222 -2.293 0.386 tpa_inf: variable region-containing chitin-binding protein 5 3.448 1.504 n y n ruditapes_c25685 12.142 0.386 0.079 0.962 n y n ruditapes_c11400 -5.782 0.386 1.295 0.224 n y n ruditapes2_c1874 -6.227 0.386 1.246 0.2 n y n ruditapes_c25031 -6.671 0.386 1.201 0.18 n y n ruditapes_s38627 -9.636 0.386 1.037 0.108 n y n ruditapes_c23108 -9.636 0.386 1.034 0.107 n y n ruditapes_c31559 -? 0.386 0.752 0 n y n ruditapes_lrc38116 -1.197 0.387 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 54.886 45.869 n n n ruditapes_lrc36846 -1.611 0.387 ribosomal protein s3 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 8.677 5.384 n y n ruditapes_c6282 1.959 0.387 2.365 4.634 n y n ruditapes_c18660 -1.711 0.387 7.046 4.119 n y n ruditapes_c21388 -1.799 0.387 6.029 3.351 n y n ruditapes_c17187 -1.888 0.387 5.287 2.8 n y n ruditapes_c18988 4.609 0.387 heparan n-sulfatase /// 0008152 // metabolic process /// 0016250 // N-sulfoglucosamine sulfohydrolase activity 0.32 1.476 n y n ruditapes_c30292 ? 0.387 0 0.75 n y n ruditapes_c30699 ? 0.387 0 0.75 n y n ruditapes_c9487 ? 0.387 serine protease inhibitor 0 0.748 n y n ruditapes_lrc15100 -3.763 0.387 1.769 0.47 n y n ruditapes_c30503 -4.003 0.387 1.671 0.418 n y n ruditapes_c16945 -5.189 0.387 1.377 0.265 n y n ruditapes2_lrc4977 -6.671 0.387 1.197 0.179 n y n ruditapes_c27813 -12.231 0.387 0.963 0.079 n y n ruditapes_c8233 -12.231 0.387 0.961 0.079 n y n ruditapes_c3942 -? 0.387 0.749 0 n y n ruditapes_c11519 -1.405 0.388 15.997 11.388 n n n ruditapes_c24112 1.731 0.388 3.716 6.432 n y n ruditapes2_c2646 -1.73 0.388 6.779 3.919 n y n ruditapes_c27731 -1.97 0.388 4.718 2.395 n y n ruditapes_c23744 -2.042 0.388 4.342 2.126 n y n ruditapes2_lrc5583 3.189 0.388 0.646 2.06 n y n ruditapes_c14300 -2.78 0.388 2.496 0.898 n y n ruditapes_c25373 -2.78 0.388 2.496 0.898 n y n ruditapes_c10393 -2.837 0.388 predicted protein [Nematostella vectensis] 2.434 0.858 n y n ruditapes2_lrc4473 -2.841 0.388 mitochondrial atp synthase lipid binding protein precursor 2.43 0.855 n y n ruditapes_c26286 -2.939 0.388 2.319 0.789 n y n ruditapes2_lrc4183 -3.291 0.388 f-type h+-transporting atpase subunit f 2.027 0.616 n y n ruditapes_c20192 -3.892 0.388 1.706 0.438 n y n ruditapes_s36286 -3.892 0.388 1.706 0.438 n y n ruditapes2_c2134 -12.231 0.388 0.959 0.078 n y n ruditapes_c20535 -? 0.388 0.745 0 n y n ruditapes_c22567 -? 0.388 mannose c type 1-like 1 0.745 0 n y n ruditapes2_c1328 -1.244 0.389 36.922 29.674 n n n ruditapes_c12378 1.449 0.389 8.705 12.617 n n n ruditapes2_c746 -1.406 0.389 15.842 11.27 n n n ruditapes_c23785 1.486 0.389 7.559 11.235 n n n ruditapes_c4520 -1.626 0.389 8.32 5.118 n y n ruditapes_c20483 1.979 0.389 2.269 4.49 n y n ruditapes_c23486 2.748 0.389 0.899 2.47 n y n ruditapes2_c2315 -2.018 0.389 4.437 2.198 n y n ruditapes_c21806 3.276 0.389 0.606 1.985 n y n ruditapes_c16838 -2.095 0.389 4.087 1.951 n y n ruditapes_c20572 -2.17 0.389 casc1 protein 3.797 1.75 n y n ruditapes2_c5268 4.857 0.389 hypothetical tyrosinase-like protein in chromosome 0.291 1.411 n y n ruditapes_c20657 6.52 0.389 methyltransferase wbscr22 0.182 1.188 n y n ruditapes_s35887 -2.841 0.389 complement component q subcomponent-like 4 2.417 0.85 n y n ruditapes_c27732 -2.841 0.389 2.41 0.848 n y n ruditapes_c16027 ? 0.389 0 0.741 n y n ruditapes_c28722 ? 0.389 0 0.741 n y n ruditapes_c12596 -4.448 0.389 1.521 0.342 n y n ruditapes_c14781 -5.401 0.389 1.331 0.246 n y n ruditapes_s37939 -20.014 0.389 0.865 0.043 n y n ruditapes_c17312 -20.014 0.389 0.863 0.043 n y n ruditapes_c6128 -1.757 0.39 6.392 3.638 n y n ruditapes_c28145 2.218 0.39 1.58 3.506 n y n ruditapes_c17178 2.491 0.39 serine threonine-protein phosphatase pp1-gamma catalytic subunit /// 0004722 // protein serine/threonine phosphatase activity /// 0048754 // branching morphogenesis of a tube /// 0051301 // cell division /// 0030145 // manganese ion binding /// 0043204 // perikaryon /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0006470 // protein amino acid dephosphorylation /// 0042587 // glycogen granule /// 0007143 // female meiosis /// 0043197 // dendritic spine /// 0005829 // cytosol /// 0030324 // lung development /// 0043021 // ribonucleoprotein binding /// 0005981 // regulation of glycogen catabolic process /// 0005506 // iron ion binding /// 0005979 // regulation of glycogen biosynthetic process /// 0006417 // regulation of translation 1.146 2.854 n y n ruditapes_c39329 2.563 0.39 1.062 2.723 n y n ruditapes2_c791 -2.011 0.39 copine family protein 4.45 2.213 n y n ruditapes_c5208 -2.177 0.39 3.74 1.717 n y n ruditapes2_lrc5241 -2.188 0.39 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 3.715 1.698 n y n ruditapes_c28935 -2.255 0.39 3.491 1.548 n y n ruditapes_c6590 -2.439 0.39 3.039 1.246 n y n ruditapes_c28106 -2.541 0.39 wd repeat domain 70 2.841 1.118 n y n ruditapes2_c2599 -2.988 0.39 2.247 0.752 n y n ruditapes_c38066 ? 0.39 alkaline phosphatase /// 0016791 // phosphatase activity /// 0046872 // metal ion binding /// 0008152 // metabolic process 0 0.739 n y n ruditapes_c10560 -4.245 0.39 1.57 0.37 n y n ruditapes_c20217 -4.448 0.39 fnbp1 protein /// 0007498 // mesoderm development /// 0016043 // cellular component organization /// 0042802 // identical protein binding /// 0044424 // intracellular part 1.514 0.34 n y n ruditapes_c27561 -4.765 0.39 1.438 0.302 n y n ruditapes_c22641 -5.401 0.39 1.325 0.245 n y n ruditapes_c32415 -5.93 0.39 calcium binding protein 1 1.255 0.212 n y n ruditapes_c13233 -8.339 0.39 1.073 0.129 n y n ruditapes_lrc37813 -9.34 0.39 1.03 0.11 n y n ruditapes_c13037 -11.119 0.39 0.976 0.088 n y n ruditapes_c18747 -? 0.39 0.739 0 n y n ruditapes_lrc33912 -1.196 0.391 ribosomal protein s16 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 54.311 45.41 n n n ruditapes2_c1592 -1.216 0.391 45.59 37.498 n n n ruditapes_c1161 -1.305 0.391 inhibitor of dna binding 2 /// 0051789 // response to protein stimulus /// 0000785 // chromatin /// 0043353 // enucleate erythrocyte differentiation /// 0045787 // positive regulation of cell cycle /// 0008284 // positive regulation of cell proliferation /// 0005634 // nucleus /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0005515 // protein binding /// 0045651 // positive regulation of macrophage differentiation /// 0005829 // cytosol /// 0016564 // transcription repressor activity /// 0007507 // heart development /// 0043433 // negative regulation of transcription factor activity 25.011 19.164 n n n ruditapes_c22243 -1.367 0.391 18.462 13.504 n n n ruditapes_c12238 -1.522 0.391 10.709 7.038 n y n ruditapes_c1170 -1.535 0.391 10.315 6.722 n y n ruditapes_c27777 -1.57 0.391 9.419 6.001 n y n ruditapes_c16327 -1.708 0.391 6.947 4.067 n y n ruditapes2_c2806 -1.827 0.391 5.669 3.103 n y n ruditapes_lrc28704 -1.951 0.391 4.773 2.446 n y n ruditapes2_c1596 -1.953 0.391 4.772 2.444 n y n ruditapes_c23639 -2.176 0.391 3.73 1.714 n y n ruditapes2_c193 4.047 0.391 placenta-specific 8 0.398 1.61 n y n ruditapes_c17723 4.137 0.391 0.382 1.58 n y n ruditapes_c28719 4.767 0.391 0.297 1.417 n y n ruditapes_c12210 6.296 0.391 0.191 1.2 n y n ruditapes_c10212 6.52 0.391 mediator complex subunit 15 /// 0016455 // RNA polymerase II transcription mediator activity /// 0006367 // transcription initiation from RNA polymerase II promoter 0.18 1.177 n y n ruditapes_c27143 -2.753 0.391 2.499 0.908 n y n ruditapes_c31936 16.189 0.391 0.055 0.884 n y n ruditapes_c29731 -2.965 0.391 2.264 0.764 n y n ruditapes_c13206 ? 0.391 probable k5 antigen synthesis 0 0.735 n y n ruditapes_c19485 ? 0.391 hypothetical protein NEMVEDRAFT_v1g67554 [Nematostella vectensis] 0 0.735 n y n ruditapes_c14329 -4.2 0.391 1.582 0.377 n y n ruditapes_lrc34007 -4.448 0.391 ubiquinol-cytochrome c complex iii subunit /// 0005739 // mitochondrion /// 0016020 // membrane 1.513 0.34 n y n ruditapes_c7892 -4.695 0.391 1.452 0.309 n y n ruditapes_lrc19500 -5.401 0.391 1.32 0.244 n y n ruditapes_c12126 -5.93 0.391 1.252 0.211 n y n ruditapes2_lrc6001 -6.424 0.391 1.2 0.187 n y n ruditapes_c14813 -9.636 0.391 1.015 0.105 n y n ruditapes_c5422 1.417 0.392 9.774 13.854 n n n ruditapes_c7769 -1.378 0.392 17.518 12.713 n n n ruditapes2_c1569 1.604 0.392 5.092 8.171 n y n ruditapes_c30327 -1.679 0.392 7.333 4.367 n y n ruditapes_c11243 -1.707 0.392 6.954 4.075 n y n ruditapes_c7841 -1.727 0.392 6.69 3.874 n y n ruditapes_c15014 -1.757 0.392 6.352 3.615 n y n ruditapes_c10953 -1.94 0.392 4.83 2.49 n y n ruditapes_c20430 2.923 0.392 0.771 2.253 n y n ruditapes_c21376 -2.005 0.392 4.45 2.219 n y n ruditapes_c2715 -2.224 0.392 3.554 1.598 n y n ruditapes_c21350 5.396 0.392 0.242 1.304 n y n ruditapes_lrc33397 -2.729 0.392 astacin-like squid metalloprotease type iii /// 0046658 // anchored to plasma membrane /// 0007420 // brain development /// 0016787 // hydrolase activity /// 0021527 // spinal cord association neuron differentiation 2.519 0.923 n y n ruditapes_c27154 -3.224 0.392 2.037 0.632 n y n ruditapes_c29778 -3.389 0.392 1.924 0.568 n y n ruditapes_c25490 -15.566 0.392 0.89 0.057 n y n ruditapes_c19828 -24.461 0.392 0.829 0.034 n y n ruditapes_c8081 1.329 0.393 14.999 19.928 n n n ruditapes2_c2948 -1.415 0.393 15.031 10.621 n n n ruditapes2_c550 -1.535 0.393 10.203 6.645 n y n ruditapes_c8855 -1.569 0.393 partner of nob1 /// 0005730 // nucleolus /// 0003723 // RNA binding 9.352 5.959 n y n ruditapes_c1549 -1.591 0.393 8.881 5.583 n y n ruditapes_lrc34362 1.957 0.393 calponin-like protein 2.311 4.521 n y n ruditapes_c26988 -1.668 0.393 7.471 4.479 n y n ruditapes_c12318 -1.824 0.393 5.656 3.101 n y n ruditapes_c14355 2.473 0.393 nicolin 1 1.152 2.849 n y n ruditapes_s33935 2.548 0.393 1.065 2.715 n y n ruditapes_c15756 -1.97 0.393 4.617 2.344 n y n ruditapes_c24171 -2.065 0.393 4.146 2.008 n y n ruditapes_c19487 3.867 0.393 0.429 1.659 n y n ruditapes_c16697 -2.571 0.393 2.745 1.067 n y n ruditapes_c15859 -2.594 0.393 2.712 1.045 n y n ruditapes_c14918 11.692 0.393 fibrinogen and fibronectin 0.081 0.946 n y n ruditapes_c26495 -2.718 0.393 novel protein 2.53 0.931 n y n ruditapes2_lrc5259 12.591 0.393 ribosomal protein l21 /// 0005829 // cytosol 0.074 0.927 n y n ruditapes_c20227 -2.931 0.393 2.279 0.777 n y n ruditapes_lrc11594 -3.009 0.393 2.205 0.733 n y n ruditapes_c29855 ? 0.393 0 0.729 n y n ruditapes_lrc22620 ? 0.393 0 0.729 n y n ruditapes_s37312 -3.41 0.393 glutathione s-transferase /// 0005515 // protein binding 1.905 0.559 n y n ruditapes_c15259 -3.953 0.393 1.649 0.417 n y n ruditapes_c5497 -4.262 0.393 1.547 0.363 n y n ruditapes_c8311 -4.818 0.393 1.412 0.293 n y n ruditapes_c12384 -5.559 0.393 1.285 0.231 n y n ruditapes2_c2925 -12.231 0.393 0.939 0.077 n y n ruditapes_c17683 -? 0.393 0.728 0 n y n ruditapes_c4113 -1.136 0.394 106.406 93.672 n n n ruditapes2_c2923 -1.308 0.394 24.334 18.607 n n n ruditapes_c19335 -1.471 0.394 12.357 8.403 n n n ruditapes_c28317 1.626 0.394 4.729 7.691 n y n ruditapes_c27431 -1.587 0.394 8.908 5.613 n y n ruditapes_c12136 -1.611 0.394 8.438 5.239 n y n ruditapes_c7733 -1.798 0.394 5.866 3.262 n y n ruditapes_c10066 -1.995 0.394 4.464 2.238 n y n ruditapes_c11533 -2.063 0.394 coiled-coil domain-containing 4.139 2.007 n y n ruditapes_c23833 -2.118 0.394 3.903 1.843 n y n ruditapes_c10177 -2.137 0.394 3.835 1.795 n y n ruditapes_c19547 -2.277 0.394 3.372 1.481 n y n ruditapes_c27191 ? 0.394 pe-pgrs family protein 0 0.728 n y n ruditapes_c18327 -3.475 0.394 1.858 0.535 n y n ruditapes_c25119 -6.671 0.394 1.162 0.174 n y n ruditapes_c7752 -20.014 0.394 0.846 0.042 n y n ruditapes2_c423 -1.225 0.395 41.866 34.188 n n n ruditapes_c12951 1.433 0.395 9.024 12.934 n n n ruditapes_c16629 -1.403 0.395 15.653 11.157 n n n ruditapes_c17934 -1.456 0.395 12.903 8.865 n n n ruditapes_c8101 -1.811 0.395 radial spoke head 9 homolog 5.737 3.169 n y n ruditapes_c18184 -1.853 0.395 5.371 2.898 n y n ruditapes_lrc33063 -1.887 0.395 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 5.103 2.704 n y n ruditapes_c7545 -1.964 0.395 hypoxia-inducible factor 1 alpha 4.613 2.349 n y n ruditapes_c24067 -2.279 0.395 3.36 1.474 n y n ruditapes_c21531 -2.347 0.395 endonuclease reverse transcriptase 3.175 1.353 n y n ruditapes_c31103 -2.383 0.395 3.093 1.298 n y n ruditapes_c579 -2.409 0.395 3.04 1.262 n y n ruditapes_c14835 -2.584 0.395 protein 2.703 1.046 n y n ruditapes_c16103 -2.763 0.395 2.449 0.886 n y n ruditapes2_c2434 ? 0.395 0 0.724 n y n ruditapes_c30492 -6.227 0.395 1.198 0.192 n y n ruditapes_c25741 -6.671 0.395 1.154 0.173 n y n ruditapes_lrc34446 -20.014 0.395 0.844 0.042 n y n ruditapes_c20097 -1.41 0.396 15.098 10.704 n n n ruditapes_c11711 -1.559 0.396 9.472 6.078 n y n ruditapes_c22312 1.897 0.396 2.546 4.83 n y n ruditapes_c28887 -1.747 0.396 protein 6.344 3.631 n y n ruditapes_lrc38975 -1.94 0.396 nadh dehydrogenase 1 beta subcomplex 9 4.736 2.441 n y n ruditapes_c24791 -2.156 0.396 3.73 1.73 n y n ruditapes_c13893 -2.182 0.396 3.632 1.665 n y n ruditapes_c30321 -2.58 0.396 2.699 1.046 n y n ruditapes_c16318 -2.611 0.396 2.655 1.017 n y n ruditapes_c22914 -2.931 0.396 2.247 0.766 n y n ruditapes_c27268 -3.177 0.396 2.035 0.64 n y n ruditapes_c16992 -3.558 0.396 1.801 0.506 n y n ruditapes_lrc8873 -3.862 0.396 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 1.663 0.431 n y n ruditapes_c17144 -3.971 0.396 1.622 0.409 n y n ruditapes_lrc37116 -8.006 0.396 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 1.062 0.133 n y n ruditapes_c13365 -? 0.396 0.72 0 n y n ruditapes_c28660 -1.268 0.397 30.416 23.985 n n n ruditapes_c30034 -1.269 0.397 30.244 23.836 n n n ruditapes_c8719 1.319 0.397 15.593 20.562 n n n ruditapes_c21871 1.327 0.397 14.879 19.743 n n n ruditapes_c23264 -1.326 0.397 21.777 16.418 n n n ruditapes_c14754 1.419 0.397 9.523 13.509 n n n ruditapes_c30365 -1.371 0.397 17.662 12.879 n n n ruditapes2_c3766 -1.454 0.397 cytochrome somatic "/// 0042743 // hydrogen peroxide metabolic process /// 0005759 // mitochondrial matrix /// 0006810 // transport /// 0006309 // DNA fragmentation involved in apoptosis /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0006123 // mitochondrial electron transport, cytochrome c to oxygen /// 0020037 // heme binding /// 0005746 // mitochondrial respiratory chain /// 0005625 // soluble fraction /// 0006979 // response to oxidative stress /// 0005829 // cytosol /// 0008635 // activation of caspase activity by cytochrome c /// 0045155 // electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity /// 0008289 // lipid binding" 12.841 8.83 n n n ruditapes_c10021 -1.587 0.397 8.771 5.525 n y n ruditapes2_c814 -1.668 0.397 7.353 4.409 n y n ruditapes_c14687 -1.72 0.397 6.638 3.859 n y n ruditapes_c14141 -1.842 0.397 5.406 2.935 n y n ruditapes2_c2355 -2.06 0.397 4.102 1.991 n y n ruditapes_c29045 -2.268 0.397 3.349 1.477 n y n ruditapes_c3830 5.171 0.397 protein /// 0008076 // voltage-gated potassium channel complex /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0005249 // voltage-gated potassium channel activity /// 0006813 // potassium ion transport 0.253 1.309 n y n ruditapes_lrc27966 16.189 0.397 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 0.053 0.863 n y n ruditapes_c30980 ? 0.397 0 0.719 n y n ruditapes_c21322 -3.197 0.397 2.009 0.629 n y n ruditapes_c25653 -4.031 0.397 1.596 0.396 n y n ruditapes_c19862 -5.559 0.397 tbc1 domain member 4 1.264 0.227 n y n ruditapes_c3661 -7.783 0.397 1.072 0.138 n y n ruditapes_c21344 -? 0.397 0.718 0 n y n ruditapes_c14627 -? 0.397 0.717 0 n y n ruditapes_lrc32125 -1.151 0.398 ribosomal protein l5 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0008097 // 5S rRNA binding 85.207 74.016 n n n ruditapes_c11100 -1.283 0.398 27.514 21.441 n n n ruditapes_c5480 -1.473 0.398 12.04 8.172 n n n ruditapes_c8241 1.603 0.398 4.969 7.967 n y n ruditapes_c17882 -1.483 0.398 11.705 7.896 n n n ruditapes2_c3448 -1.786 0.398 yellow cameleon 5.882 3.293 n y n ruditapes_c8274 -1.906 0.398 4.924 2.584 n y n ruditapes_c10261 -1.938 0.398 zinc finger protein 265 /// 0003700 // transcription factor activity /// 0008380 // RNA splicing /// 0005634 // nucleus /// 0005515 // protein binding /// 0003723 // RNA binding /// 0008270 // zinc ion binding 4.716 2.434 n y n ruditapes_lrc13177 -2.1 0.398 3.912 1.863 n y n ruditapes_c8338 -2.107 0.398 3.878 1.841 n y n ruditapes_c17404 -2.616 0.398 2.618 1.001 n y n ruditapes_c23167 -2.878 0.398 adp-ribosyl cyclase 2.286 0.795 n y n ruditapes_c24010 ? 0.398 0 0.715 n y n ruditapes_c2332 ? 0.398 0 0.714 n y n ruditapes_c3817 -3.336 0.398 translocase of outer mitochondrial membrane 7 homolog 1.914 0.574 n y n ruditapes_c8769 -3.706 0.398 1.717 0.463 n y n ruditapes_s37249 -5.337 0.398 secreted surface protein with fasciclin-like repeats 1.293 0.242 n y n ruditapes_c11854 -? 0.398 0.715 0 n y n ruditapes2_c31 -1.175 0.399 64.347 54.747 n n n ruditapes_c9315 -1.275 0.399 28.871 22.651 n n n ruditapes_c5019 -1.452 0.399 12.817 8.824 n n n ruditapes_c28901 1.752 0.399 alpha isoform of regulatory subunit protein phosphatase 2 /// 0044238 // primary metabolic process /// 0005488 // binding /// 0050794 // regulation of cellular process /// 0044424 // intracellular part /// 0034960 // cellular biopolymer metabolic process 3.375 5.914 n y n ruditapes_c23970 2.012 0.399 2.056 4.138 n y n ruditapes_c22213 -1.858 0.399 5.245 2.823 n y n ruditapes_lrc16587 -1.882 0.399 5.062 2.69 n y n ruditapes_c9945 2.648 0.399 0.943 2.497 n y n ruditapes_lrc27110 -2.141 0.399 3.728 1.741 n y n ruditapes_c24058 -2.277 0.399 3.305 1.452 n y n ruditapes_c9387 -2.278 0.399 3.294 1.446 n y n ruditapes_c19288 -2.399 0.399 3.006 1.253 n y n ruditapes_c16319 -2.594 0.399 2.642 1.018 n y n ruditapes_c24378 -2.623 0.399 2.602 0.992 n y n ruditapes_c13822 ? 0.399 0 0.712 n y n ruditapes_c28063 ? 0.399 0 0.712 n y n ruditapes_c6111 ? 0.399 0 0.711 n y n ruditapes_c28557 -3.089 0.399 2.075 0.672 n y n ruditapes_c6936 -3.133 0.399 class member 2 "/// 0004571 // mannosyl-oligosaccharide 1, 2-alpha-mannosidase activity /// 0016020 // membrane /// 0005509 // calcium ion binding" 2.043 0.652 n y n ruditapes_c28109 -3.706 0.399 1.704 0.46 n y n ruditapes_lrc15900 -3.953 0.399 1.606 0.406 n y n ruditapes_c30052 -6.227 0.399 1.175 0.189 n y n ruditapes_c22342 -7.227 0.399 1.093 0.151 n y n ruditapes2_c2347 -26.685 0.399 0.799 0.03 n y n ruditapes_c26393 -? 0.399 0.712 0 n y n ruditapes_c13245 -? 0.399 0.71 0 n y n ruditapes_c4041 -1.346 0.4 19.523 14.504 n n n ruditapes_c25829 -1.812 0.4 5.595 3.088 n y n ruditapes_s36175 2.368 0.4 1.259 2.981 n y n ruditapes_c7284 -1.967 0.4 4.508 2.292 n y n ruditapes_c26413 -1.967 0.4 4.5 2.288 n y n ruditapes_c2072 -2.09 0.4 3.918 1.875 n y n ruditapes_c16839 -2.458 0.4 2.866 1.166 n y n ruditapes_c22194 -2.669 0.4 2.522 0.945 n y n ruditapes_c12498 ? 0.4 coenzyme q9 homolog precursor /// 0005739 // mitochondrion 0 0.709 n y n ruditapes_c13866 -3.089 0.4 2.071 0.67 n y n ruditapes_c12222 -3.191 0.4 1.996 0.626 n y n ruditapes_c10622 -5.93 0.4 glucose transporter /// 0006810 // transport /// 0042127 // regulation of cell proliferation /// 0051726 // regulation of cell cycle /// 0005730 // nucleolus /// 0016020 // membrane /// 0005525 // GTP binding /// 0005515 // protein binding /// 0016491 // oxidoreductase activity /// 0005355 // glucose transmembrane transporter activity 1.203 0.203 n y n ruditapes_c18081 -22.238 0.4 0.813 0.037 n y n ruditapes_c22211 -? 0.4 0.708 0 n y n ruditapes_c3866 -1.249 0.401 34.054 27.27 n n n ruditapes2_c1673 -1.498 0.401 eukaryotic translation initiation factor subunit 4 44kda /// 0006446 // regulation of translational initiation /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0005829 // cytosol 11.006 7.347 n n n ruditapes_c20544 -1.593 0.401 8.54 5.362 n y n ruditapes2_c1674 -1.732 0.401 sjchgc04703 protein 6.372 3.679 n y n ruditapes2_c5 -1.795 0.401 mitochondrial atp synthase gamma-subunit /// 0006810 // transport 5.728 3.192 n y n ruditapes_c14062 -1.964 0.401 4.496 2.29 n y n ruditapes_c25831 -2.395 0.401 2.994 1.25 n y n ruditapes_lrc17926 -2.42 0.401 2.932 1.211 n y n ruditapes_c17332 7.195 0.401 0.15 1.08 n y n ruditapes_lrc36613 7.195 0.401 0.15 1.078 n y n ruditapes_c26700 -2.575 0.401 2.645 1.027 n y n ruditapes_c10456 -2.628 0.401 2.57 0.978 n y n ruditapes_lrc29828 -3.558 0.401 1.763 0.496 n y n ruditapes_c14830 -3.78 0.401 1.663 0.44 n y n ruditapes_c18743 -7.783 0.401 1.053 0.135 n y n ruditapes_c18390 -12.231 0.401 0.907 0.074 n y n ruditapes_c10754 -? 0.401 0.706 0 n y n ruditapes_c1717 -1.249 0.402 33.787 27.047 n n n ruditapes_c18685 -1.412 0.402 14.615 10.347 n n n ruditapes_c26752 -1.492 0.402 11.168 7.486 n n n ruditapes_c11879 -1.597 0.402 8.394 5.255 n y n ruditapes2_c1752 -1.713 0.402 6.582 3.842 n y n ruditapes_c16650 -1.779 0.402 5.855 3.291 n y n ruditapes_lrc18187 -1.898 0.402 4.88 2.571 n y n ruditapes_c18530 -1.921 0.402 thap domain-containing protein partial 4.742 2.469 n y n ruditapes_c7326 3.854 0.402 small gtp-binding protein /// 0016020 // membrane 0.416 1.602 n y n ruditapes_c14429 5.396 0.402 0.231 1.249 n y n ruditapes2_c4755 -2.409 0.402 ribosomal protein s3a /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0006413 // translational initiation /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0009790 // embryonic development 2.947 1.223 n y n ruditapes_c5124 -2.83 0.402 2.299 0.812 n y n ruditapes_c5518 -2.859 0.402 vacuolar protein sorting 26 homolog b ( pombe) /// 0015031 // protein transport /// 0005515 // protein binding /// 0005829 // cytosol /// 0007034 // vacuolar transport /// 0030904 // retromer complex 2.263 0.792 n y n ruditapes_c16998 -2.908 0.402 2.218 0.763 n y n ruditapes_c20978 ? 0.402 0 0.703 n y n ruditapes_c9545 ? 0.402 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0 0.701 n y n ruditapes2_c1015 -5.559 0.402 1.237 0.223 n y n ruditapes2_lrc4943 -6.115 0.402 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 1.172 0.192 n y n ruditapes_lrc29112 -8.895 0.402 0.996 0.112 n y n ruditapes_c12491 -12.231 0.402 0.903 0.074 n y n ruditapes_c24814 -? 0.402 0.704 0 n y n ruditapes_c28237 -? 0.402 0.702 0 n y n ruditapes_c16118 -? 0.402 0.701 0 n y n ruditapes_c27229 -1.518 0.403 10.261 6.758 n y n ruditapes_lrc12587 -1.529 0.403 9.948 6.504 n y n ruditapes_c30979 -1.568 0.403 8.981 5.728 n y n ruditapes_c19913 1.765 0.403 3.236 5.712 n y n ruditapes_c21200 -1.597 0.403 8.389 5.255 n y n ruditapes_c13094 2.151 0.403 1.636 3.52 n y n ruditapes2_c4386 2.228 0.403 ribosomal protein s12 /// 0006414 // translational elongation /// 0005739 // mitochondrion /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 1.475 3.286 n y n ruditapes2_c63 2.308 0.403 1.335 3.081 n y n ruditapes_c15705 -1.988 0.403 4.343 2.185 n y n ruditapes_c8458 -2.026 0.403 4.138 2.042 n y n ruditapes_c24097 3.212 0.403 0.595 1.912 n y n ruditapes2_c397 -2.277 0.403 alpha b-crystallin /// 0043066 // negative regulation of apoptosis /// 0031109 // microtubule polymerization or depolymerization /// 0005794 // Golgi apparatus /// 0000267 // cell fraction /// 0015630 // microtubule cytoskeleton /// 0032432 // actin filament bundle /// 0006006 // glucose metabolic process /// 0007568 // aging /// 0048513 // organ development /// 0009986 // cell surface /// 0032355 // response to estradiol stimulus /// 0051403 // stress-activated MAPK cascade /// 0008017 // microtubule binding /// 0043292 // contractile fiber /// 0042542 // response to hydrogen peroxide /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0030308 // negative regulation of cell growth /// 0006457 // protein folding 3.244 1.424 n y n ruditapes_c20110 -2.395 0.403 novel protein vertebrate elongation of very long chain fatty acids (fen1 sur4 yeast)-like (zgc:112263) 2.958 1.235 n y n ruditapes_c22156 -3.706 0.403 1.682 0.454 n y n ruditapes_lrc34945 -4.003 0.403 1.565 0.391 n y n ruditapes2_c2869 -4.186 0.403 phage lysozyme 1.506 0.36 n y n ruditapes_c7875 -8.895 0.403 0.99 0.111 n y n ruditapes_c23997 -11.119 0.403 0.924 0.083 n y n ruditapes_c6547 -16.678 0.403 tetraspanin 3 0.841 0.05 n y n ruditapes_c28410 -24.461 0.403 0.791 0.032 n y n ruditapes_lrc35908 -1.285 0.404 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 26.528 20.643 n n n ruditapes_lrc19095 1.43 0.404 8.837 12.634 n n n ruditapes2_c2983 -1.442 0.404 12.997 9.014 n n n ruditapes_c23270 -1.466 0.404 12.023 8.203 n n n ruditapes_c18881 -1.595 0.404 8.394 5.264 n y n ruditapes_c31626 -1.606 0.404 8.164 5.083 n y n ruditapes_c10245 -1.676 0.404 7.015 4.186 n y n ruditapes_c16921 -1.688 0.404 6.844 4.055 n y n ruditapes_c14532 -1.734 0.404 6.265 3.613 n y n ruditapes_c3424 -1.946 0.404 4.542 2.334 n y n ruditapes_c31690 2.923 0.404 0.73 2.135 n y n ruditapes_c7149 -2.155 0.404 eukaryotic translation elongation factor 1 epsilon 1 "/// 0008285 // negative regulation of cell proliferation /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0005515 // protein binding /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator" 3.611 1.676 n y n ruditapes_c22451 -2.278 0.404 3.228 1.417 n y n ruditapes2_c1398 -2.296 0.404 peptidylprolyl isomerase (ec ) - rat 3.192 1.39 n y n ruditapes_c27979 -2.347 0.404 3.053 1.301 n y n ruditapes_c9663 -2.395 0.404 2.95 1.232 n y n ruditapes_c2192 7.645 0.404 tpa_inf: variable region-containing chitin-binding protein 5 0.136 1.037 n y n ruditapes2_lrc3322 -2.79 0.404 2.321 0.832 n y n ruditapes_c29955 ? 0.404 0 0.698 n y n ruditapes_c11898 ? 0.404 0 0.697 n y n ruditapes_c28291 ? 0.404 0 0.697 n y n ruditapes_c28334 ? 0.404 xylulokinase homolog "/// 0016772 // transferase activity, transferring phosphorus-containing groups" 0 0.696 n y n ruditapes_c27142 ? 0.404 0 0.695 n y n ruditapes_c16271 -3.058 0.404 2.058 0.673 n y n ruditapes_c29409 -3.089 0.404 2.033 0.658 n y n ruditapes_c8976 -3.542 0.404 b chain miniprotein mp-2 complex with streptavidin 1.749 0.494 n y n ruditapes_c7312 -10.007 0.404 0.948 0.095 n y n ruditapes_s37642 -20.014 0.404 hypothetical protein BRAFLDRAFT_228282 [Branchiostoma floridae] 0.812 0.041 n y n ruditapes2_c1658 -24.461 0.404 0.789 0.032 n y n ruditapes_c12815 -? 0.404 0.697 0 n y n ruditapes2_c973 -1.191 0.405 solute carrier family member 38 /// 0006810 // transport /// 0005488 // binding /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 53.367 44.79 n n n ruditapes_lrc12134 1.376 0.405 60s ribosomal protein l32 11.152 15.35 n n n ruditapes_c8653 -1.462 0.405 12.107 8.281 n n n ruditapes_c9353 -1.511 0.405 10.372 6.863 n y n ruditapes_c11305 -1.597 0.405 8.288 5.188 n y n ruditapes_c24919 1.834 0.405 2.765 5.072 n y n ruditapes_c7077 -1.818 0.405 novel protein 5.434 2.989 n y n ruditapes_c2282 -1.838 0.405 5.256 2.86 n y n ruditapes_c20118 -2.058 0.405 3.963 1.926 n y n ruditapes_c24139 -2.095 0.405 3.812 1.819 n y n ruditapes_c12824 -2.224 0.405 3.374 1.517 n y n ruditapes_c31607 -2.83 0.405 2.269 0.802 n y n ruditapes_c20298 ? 0.405 0 0.694 n y n ruditapes_c26383 ? 0.405 0 0.693 n y n ruditapes_c26073 -3.639 0.405 1.696 0.466 n y n ruditapes_c12823 -6.227 0.405 1.15 0.185 n y n ruditapes_c14424 -8.895 0.405 0.981 0.11 n y n ruditapes_c21371 -8.895 0.405 0.981 0.11 n y n ruditapes_s36692 -10.007 0.405 0.946 0.094 n y n ruditapes_c26300 -17.79 0.405 0.825 0.046 n y n ruditapes_c20156 -20.014 0.405 0.808 0.04 n y n ruditapes_c28362 -22.238 0.405 0.796 0.036 n y n ruditapes_c8638 -1.087 0.406 242.36 222.861 n n n ruditapes_c25168 -1.337 0.406 19.853 14.844 n n n ruditapes_c26485 -1.49 0.406 11.03 7.402 n n n ruditapes2_c1276 -1.495 0.406 10.86 7.266 n n n ruditapes_c12176 -1.509 0.406 10.438 6.919 n y n ruditapes2_c1129 -1.743 0.406 bcl2l protein /// 0051239 // regulation of multicellular organismal process /// 0051094 // positive regulation of developmental process /// 0014070 // response to organic cyclic substance /// 0010035 // response to inorganic substance /// 0006952 // defense response /// 0008283 // cell proliferation /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0006916 // anti-apoptosis /// 0042802 // identical protein binding /// 0010468 // regulation of gene expression /// 0048522 // positive regulation of cellular process /// 0031090 // organelle membrane /// 0051179 // localization /// 0044260 // cellular macromolecule metabolic process /// 0012505 // endomembrane system /// 0031967 // organelle envelope /// 0048468 // cell development /// 0007005 // mitochondrion organization /// 0051704 // multi-organism process /// 0022414 // reproductive process /// 0009628 // response to abiotic stimulus /// 0030003 // cellular cation homeostasis /// 0009653 // anatomical structure morphogenesis /// 0030097 // hemopoiesis /// 0006955 // immune response /// 0051881 // regulation of mitochondrial membrane potential /// 0042113 // B cell activation /// 0001894 // tissue homeostasis /// 0046983 // protein dimerization activity /// 0043393 // regulation of protein binding /// 0043279 // response to alkaloid /// 0043154 // negative regulation of caspase activity /// 0032845 // negative regulation of homeostatic process 6.133 3.519 n y n ruditapes_lrc34440 3.27 0.406 calmodulin /// 0017022 // myosin binding /// 0005509 // calcium ion binding 0.568 1.857 n y n ruditapes2_c2244 -2.143 0.406 short-chain dehydrogenase reductase 3.623 1.691 n y n ruditapes_c19878 -2.224 0.406 3.359 1.51 n y n ruditapes_c18299 4.609 0.406 0.295 1.36 n y n ruditapes_c24857 ? 0.406 0 0.69 n y n ruditapes_c23176 -4.225 0.406 1.478 0.35 n y n ruditapes_c9803 -5.115 0.406 1.284 0.251 n y n ruditapes_c16620 -7.413 0.406 1.051 0.142 n y n ruditapes_c23671 -10.007 0.406 0.94 0.094 n y n ruditapes_c17134 -? 0.406 0.691 0 n y n ruditapes_c21692 -? 0.406 0.69 0 n y n ruditapes_c31935 -? 0.406 hypothetical protein BRAFLDRAFT_67980 [Branchiostoma floridae] 0.689 0 n y n ruditapes_c6496 -1.146 0.407 beta 2c /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0051179 // localization /// 0009987 // cellular process 88.272 77.055 n n n ruditapes_c12309 1.175 0.407 45.02 52.896 n n n ruditapes2_lrc6346 -1.231 0.407 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 37.88 30.779 n n n ruditapes_c23348 -1.464 0.407 11.941 8.158 n n n ruditapes2_c2016 -1.529 0.407 9.812 6.417 n y n ruditapes_c5674 -1.534 0.407 9.681 6.311 n y n ruditapes_c14167 -1.537 0.407 9.588 6.238 n y n ruditapes_c8097 -1.61 0.407 7.968 4.949 n y n ruditapes_c27769 -1.733 0.407 6.202 3.579 n y n ruditapes_c12308 -1.847 0.407 corticotropin releasing hormone binding protein 5.139 2.783 n y n ruditapes_c19537 2.548 0.407 nudix (nucleoside diphosphate linked moiety x)-type motif 12 /// 0046872 // metal ion binding /// 0005634 // nucleus /// 0016787 // hydrolase activity 1.007 2.566 n y n ruditapes_c5070 -1.906 0.407 4.728 2.481 n y n ruditapes_s39177 -2.065 0.407 tryptase gamma 1 3.905 1.891 n y n ruditapes_c4087 -2.093 0.407 3.782 1.807 n y n ruditapes2_lrc5688 4.587 0.407 mitochondrial atp synthase f chain 0.296 1.359 n y n ruditapes_c10611 5.096 0.407 0.248 1.264 n y n ruditapes_lrc34111 -2.446 0.407 cop9 constitutive photomorphogenic homolog subunit 4 /// 0008180 // signalosome /// 0005515 // protein binding /// 0005737 // cytoplasm 2.812 1.15 n y n ruditapes_lrc35657 -2.571 0.407 2.585 1.005 n y n ruditapes_c20091 10.343 0.407 0.089 0.92 n y n ruditapes_c24250 ? 0.407 0 0.688 n y n ruditapes_c23836 ? 0.407 0 0.687 n y n ruditapes_lrc36009 -3.6 0.407 inhibitor of apoptosis protein 1 1.7 0.472 n y n ruditapes_c1142 -3.614 0.407 cell wall surface anchor family protein 1.69 0.468 n y n ruditapes_c38062 -3.706 0.407 1.653 0.446 n y n ruditapes_s38513 -3.706 0.407 1.648 0.445 n y n ruditapes_c36919 -3.763 0.407 1.629 0.433 n y n ruditapes_c11484 -3.892 0.407 1.576 0.405 n y n ruditapes_lrc9304 -4.726 0.407 1.35 0.286 n y n ruditapes_s34803 -7.413 0.407 1.048 0.141 n y n ruditapes_s33743 -11.119 0.407 0.907 0.082 n y n ruditapes_c29362 -? 0.407 0.689 0 n y n ruditapes_c15552 -? 0.407 0.688 0 n y n ruditapes_c26290 1.235 0.408 PREDICTED: similar to predicted protein [Hydra magnipapillata] 25.987 32.094 n n n ruditapes2_c4204 -1.518 0.408 10.075 6.635 n y n ruditapes_c14133 -1.57 0.408 hypotheticial protein 8.775 5.59 n y n ruditapes_c16589 -1.57 0.408 8.738 5.565 n y n ruditapes_c24468 -1.698 0.408 polymerase i polypeptide 30kda /// 0005736 // DNA-directed RNA polymerase I complex /// 0003899 // DNA-directed RNA polymerase activity /// 0005654 // nucleoplasm /// 0003677 // DNA binding /// 0006360 // transcription from RNA polymerase I promoter /// 0046983 // protein dimerization activity 6.584 3.876 n y n ruditapes2_c623 2.116 0.408 1.685 3.565 n y n ruditapes_c17280 2.473 0.408 1.08 2.672 n y n ruditapes_lrc21604 -1.973 0.408 4.322 2.191 n y n ruditapes_c18460 3.957 0.408 ras-related c3 botulinum toxin substrate 1 precursor /// 0030334 // regulation of cell migration /// 0030027 // lamellipodium /// 0060263 // regulation of respiratory burst /// 0035025 // positive regulation of Rho protein signal transduction /// 0005624 // membrane fraction /// 0031529 // ruffle organization /// 0008283 // cell proliferation /// 0021831 // embryonic olfactory bulb interneuron precursor migration /// 0006972 // hyperosmotic response /// 0048261 // negative regulation of receptor-mediated endocytosis /// 0051668 // localization within membrane /// 0019897 // extrinsic to plasma membrane /// 0006935 // chemotaxis /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0045740 // positive regulation of DNA replication /// 0021799 // cerebral cortex radially oriented cell migration /// 0010310 // regulation of hydrogen peroxide metabolic process /// 0043552 // positive regulation of phosphoinositide 3-kinase activity /// 0042470 // melanosome /// 0030838 // positive regulation of actin filament polymerization /// 0006954 // inflammatory response /// 0005829 // cytosol /// 0030742 // GTP-dependent protein binding /// 0030032 // lamellipodium assembly /// 0045453 // bone resorption /// 0007155 // cell adhesion /// 0007411 // axon guidance /// 0016358 // dendrite development /// 0019899 // enzyme binding /// 0016601 // Rac protein signal transduction 0.385 1.524 n y n ruditapes_c30239 -2.541 0.408 sorting nexin 17 /// 0005769 // early endosome /// 0005856 // cytoskeleton /// 0005794 // Golgi apparatus /// 0006707 // cholesterol catabolic process /// 0035091 // phosphoinositide binding /// 0006886 // intracellular protein transport /// 0016020 // membrane /// 0050750 // low-density lipoprotein receptor binding /// 0016197 // endosome transport /// 0008022 // protein C-terminus binding /// 0007165 // signal transduction /// 0006898 // receptor-mediated endocytosis /// 0030100 // regulation of endocytosis 2.622 1.032 n y n ruditapes2_c6420 ? 0.408 0 0.684 n y n ruditapes_c17223 ? 0.408 mucosa associated lymphoid tissue lymphoma translocation gene 1 /// 0042981 // regulation of apoptosis /// 0019209 // kinase activator activity /// 0051259 // protein oligomerization /// 0005634 // nucleus /// 0007250 // activation of NF-kappaB-inducing kinase activity /// 0051168 // nuclear export /// 0004871 // signal transducer activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0043621 // protein self-association /// 0032743 // positive regulation of interleukin-2 production /// 0050852 // T cell receptor signaling pathway /// 0042110 // T cell activation /// 0004842 // ubiquitin-protein ligase activity /// 0002726 // positive regulation of T cell cytokine production 0 0.684 n y n ruditapes_c14934 -3.089 0.408 2.002 0.648 n y n ruditapes_c12987 -3.336 0.408 1.832 0.549 n y n ruditapes_c14227 -3.558 0.408 hypothetical protein BRAFLDRAFT_122381 [Branchiostoma floridae] 1.708 0.48 n y n ruditapes_c12889 -4.031 0.408 1.519 0.377 n y n ruditapes_c24811 -5.401 0.408 1.228 0.227 n y n ruditapes_c14960 -6.301 0.408 1.124 0.178 n y n ruditapes_lrc29929 -8.895 0.408 kazal-type serine proteinase inhibitor 0.969 0.109 n y n ruditapes_c24728 -10.007 0.408 0.93 0.093 n y n ruditapes_c20941 -12.231 0.408 0.879 0.072 n y n ruditapes_c214 -? 0.408 0.683 0 n y n ruditapes_c2058 -1.324 0.409 21.017 15.878 n n n ruditapes_c30709 -1.332 0.409 20.109 15.096 n n n ruditapes_c15720 -1.523 0.409 9.905 6.504 n y n ruditapes_c10420 -1.574 0.409 8.625 5.481 n y n ruditapes_c25517 -1.598 0.409 8.132 5.09 n y n ruditapes_c15986 -2.359 0.409 centrosome and spindle pole associated protein 1 2.963 1.256 n y n ruditapes_lrc24897 7.645 0.409 0.133 1.018 n y n ruditapes_c18133 -2.621 0.409 importin 9 /// 0006606 // protein import into nucleus /// 0005737 // cytoplasm /// 0008565 // protein transporter activity /// 0042393 // histone binding 2.496 0.952 n y n ruditapes_c8198 -3.583 0.409 1.693 0.472 n y n ruditapes2_c2830 -3.614 0.409 1.679 0.465 n y n ruditapes_lrc38836 -5.559 0.409 1.201 0.216 n y n ruditapes_c30645 -5.93 0.409 1.158 0.195 n y n ruditapes_c24633 -? 0.409 0.683 0 n y n ruditapes2_c841 -1.284 0.41 gelsolin 26.029 20.265 n n n ruditapes_c21162 -1.673 0.41 6.877 4.111 n y n ruditapes_c16281 -2.029 0.41 4.004 1.974 n y n ruditapes_c27486 -2.113 0.41 3.662 1.733 n y n ruditapes_c9704 -2.188 0.41 3.415 1.561 n y n ruditapes_c15028 -2.224 0.41 3.293 1.481 n y n ruditapes_lrc32556 6.52 0.41 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.167 1.09 n y n ruditapes2_c2218 -2.502 0.41 sphingomyelin acid-like 3b 2.676 1.07 n y n ruditapes_lrc36771 -2.502 0.41 protein /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 2.676 1.07 n y n ruditapes_c17085 11.692 0.41 band stomatin /// 0007638 // mechanosensory behavior /// 0043005 // neuron projection 0.075 0.881 n y n ruditapes_lrc18393 -2.891 0.41 2.158 0.747 n y n ruditapes2_c2083 ? 0.41 sflq611 isoform 1 /// 0005730 // nucleolus /// 0005737 // cytoplasm 0 0.678 n y n ruditapes2_c1737 -3.706 0.41 1.632 0.44 n y n ruditapes_c19831 -4.2 0.41 1.455 0.346 n y n ruditapes_c6778 -4.448 0.41 1.395 0.314 n y n ruditapes_c8471 -7.413 0.41 1.034 0.139 n y n ruditapes2_lrc6583 -9.451 0.41 0.944 0.1 n y n ruditapes_c29682 -9.451 0.41 0.941 0.1 n y n ruditapes_c22375 -17.79 0.41 0.807 0.045 n y n ruditapes_c17353 -? 0.41 0.678 0 n y n ruditapes_c1391 -1.241 0.411 34.566 27.859 n n n ruditapes2_c1654 -1.601 0.411 8 4.997 n y n ruditapes_c17069 -1.822 0.411 5.247 2.88 n y n ruditapes_c31710 2.473 0.411 1.067 2.64 n y n ruditapes_c10658 -1.922 0.411 4.559 2.372 n y n ruditapes_c34621 3.469 0.411 ae-like protein 0.491 1.703 n y n ruditapes_lrc34758 3.533 0.411 0.473 1.67 n y n ruditapes_lrc38641 -2.224 0.411 ribosomal protein ubq l40e /// 0044267 // cellular protein metabolic process /// 0005515 // protein binding /// 0005840 // ribosome 3.29 1.48 n y n ruditapes_c30161 ? 0.411 glyoxylate reductase hydroxypyruvate reductase /// 0003824 // catalytic activity /// 0048037 // cofactor binding 0 0.677 n y n ruditapes_c7551 ? 0.411 phenylalanyl-trna synthetase beta /// 0003824 // catalytic activity 0 0.676 n y n ruditapes_c8506 ? 0.411 type alpha 2 0 0.676 n y n ruditapes_c31364 ? 0.411 0 0.675 n y n ruditapes2_c3635 -3.177 0.411 1.908 0.601 n y n ruditapes_c25087 -3.437 0.411 1.748 0.509 n y n ruditapes_c26500 -3.558 0.411 1.69 0.475 n y n ruditapes_c11540 -5.083 0.411 1.263 0.248 n y n ruditapes_c24143 -7.413 0.411 1.031 0.139 n y n ruditapes_c26694 -? 0.411 0.675 0 n y n ruditapes_c10014 1.224 0.412 27.997 34.268 n n n ruditapes_c14882 1.349 0.412 12.396 16.723 n n n ruditapes_c13565 -1.595 0.412 8.078 5.064 n y n ruditapes_c10259 2.698 0.412 0.852 2.299 n y n ruditapes_c10828 -2.006 0.412 emg1 nucleolar protein homolog 4.086 2.037 n y n ruditapes_c6214 4.16 0.412 peptidoglycan binding domain-containing protein "/// 0016798 // hydrolase activity, acting on glycosyl bonds" 0.346 1.437 n y n ruditapes_c31687 -2.281 0.412 3.118 1.367 n y n ruditapes_c21059 6.745 0.412 elongation factor 1 homolog ( cerevisiae) /// 0003746 // translation elongation factor activity 0.157 1.062 n y n ruditapes_c15322 -2.724 0.412 2.32 0.852 n y n ruditapes_c12646 -2.849 0.412 sulfiredoxin 1 homolog ( cerevisiae) /// 0005488 // binding /// 0006979 // response to oxidative stress /// 0005829 // cytosol 2.181 0.765 n y n ruditapes_c16769 -3.6 0.412 1.661 0.461 n y n ruditapes_c8859 -4.448 0.412 1.382 0.311 n y n ruditapes_c15214 -5.559 0.412 1.189 0.214 n y n ruditapes_c27787 -6.115 0.412 1.125 0.184 n y n ruditapes_c20160 -7.783 0.412 1.004 0.129 n y n ruditapes_lrc25962 -10.007 0.412 related to glyoxal oxidase precursor 0.916 0.091 n y n ruditapes_lrc38221 -10.007 0.412 0.916 0.091 n y n ruditapes_c28493 -? 0.412 0.673 0 n y n ruditapes_c30079 -? 0.412 0.673 0 n y n ruditapes2_lrc3330 1.16 0.413 aplp_locmi ame: full=apolipophorins contains: ame: full=apolipophorin-2 ame: full=apolipophorin ii ame: full=apolp-2 contains: ame: full=apolipophorin-1 ame: full=apolipophorin i ame: full=apolp-1 flags: precursor 51.891 60.188 n n n ruditapes_c9449 1.259 0.413 potassium channel tetramerization domain containing 10 /// 0016020 // membrane 21.205 26.707 n n n ruditapes_c16554 -1.338 0.413 19.175 14.327 n n n ruditapes_c23388 -1.486 0.413 10.861 7.309 n n n ruditapes_c31447 1.633 0.413 4.278 6.987 n y n ruditapes_c37594 1.707 0.413 unnamed protein product [Tetraodon nigroviridis] 3.546 6.052 n y n ruditapes_c7163 1.834 0.413 2.668 4.894 n y n ruditapes_c12103 -1.609 0.413 nadh-ubiquinone oxidoreductase flavoprotein 1 "/// 0040039 // inductive cell migration /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0043054 // dauer exit /// 0010181 // FMN binding /// 0040010 // positive regulation of growth rate /// 0008406 // gonad development /// 0042493 // response to drug /// 0033108 // mitochondrial respiratory chain complex assembly /// 0030421 // defecation /// 0048598 // embryonic morphogenesis /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0040018 // positive regulation of multicellular organism growth /// 0051287 // NAD or NADH binding /// 0043050 // pharyngeal pumping /// 0005747 // mitochondrial respiratory chain complex I /// 0008340 // determination of adult lifespan /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0045333 // cellular respiration /// 0005506 // iron ion binding /// 0009792 // embryonic development ending in birth or egg hatching" 7.789 4.84 n y n ruditapes_c241 -1.614 0.413 7.708 4.775 n y n ruditapes_c20376 -1.719 0.413 6.212 3.613 n y n ruditapes2_c126 2.133 0.413 1.607 3.429 n y n ruditapes_c11170 2.417 0.413 1.126 2.721 n y n ruditapes2_c2677 ? 0.413 0 0.671 n y n ruditapes_c2352 -3.558 0.413 beta-ig-h3 fasciclin 1.677 0.471 n y n ruditapes_c30668 -3.706 0.413 1.611 0.435 n y n ruditapes_c10551 -4.245 0.413 1.428 0.336 n y n ruditapes_c21117 -4.448 0.413 1.377 0.31 n y n ruditapes_c22537 -4.818 0.413 1.298 0.269 n y n ruditapes_c24266 -21.126 0.413 0.774 0.037 n y n ruditapes_c12698 -22.238 0.413 0.769 0.035 n y n ruditapes_c26995 -24.461 0.413 0.76 0.031 n y n ruditapes_c1091 -? 0.413 0.669 0 n y n ruditapes_c7411 -1.33 0.414 19.947 14.999 n n n ruditapes_c20223 1.772 0.414 3.032 5.374 n y n ruditapes_c15850 -1.63 0.414 7.408 4.546 n y n ruditapes_c13620 1.932 0.414 2.208 4.265 n y n ruditapes_c21667 2.948 0.414 0.686 2.023 n y n ruditapes_c23977 -2.152 0.414 3.465 1.61 n y n ruditapes_c20679 -2.298 0.414 3.041 1.323 n y n ruditapes_c11789 -2.347 0.414 2.932 1.249 n y n ruditapes_c4960 -2.372 0.414 2.881 1.214 n y n ruditapes_c17138 -2.446 0.414 2.728 1.115 n y n ruditapes_c5884 -2.58 0.414 2.505 0.971 n y n ruditapes_c10809 11.692 0.414 0.074 0.866 n y n ruditapes_c10324 -2.732 0.414 di-n-acetyl- "/// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0016052 // carbohydrate catabolic process" 2.294 0.84 n y n ruditapes_c3624 ? 0.414 brain protein i3 0 0.667 n y n ruditapes_c25875 -3.336 0.414 1.784 0.535 n y n ruditapes_c9179 -5.559 0.414 reverse transcriptase 1.179 0.212 n y n ruditapes_c21628 -5.559 0.414 1.174 0.211 n y n ruditapes2_c1873 -10.563 0.414 0.895 0.085 n y n ruditapes2_c1951 -11.119 0.414 0.88 0.079 n y n ruditapes_c21938 -17.79 0.414 0.793 0.045 n y n ruditapes2_c1641 -? 0.414 0.668 0 n y n ruditapes_c4831 1.232 0.415 25.825 31.814 n n n ruditapes_c20033 -1.354 0.415 17.664 13.048 n n n ruditapes_c7194 -1.458 0.415 11.755 8.061 n n n ruditapes_c18742 -1.462 0.415 11.587 7.926 n n n ruditapes_c14186 -1.479 0.415 10.969 7.417 n n n ruditapes_c29755 1.609 0.415 4.553 7.325 n y n ruditapes2_c520 -1.668 0.415 6.81 4.083 n y n ruditapes2_c877 2.209 0.415 tp53 regulated inhibitor of apoptosis 1 "/// 0043027 // caspase inhibitor activity /// 0005739 // mitochondrion /// 0006916 // anti-apoptosis /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest /// 0005515 // protein binding" 1.439 3.179 n y n ruditapes_c34484 -1.936 0.415 4.386 2.266 n y n ruditapes_c20048 -2.168 0.415 3.392 1.564 n y n ruditapes_c8907 -2.491 0.415 2.632 1.057 n y n ruditapes_c22733 -2.553 0.415 2.535 0.993 n y n ruditapes_c7657 -2.898 0.415 2.109 0.728 n y n ruditapes_s32563 ? 0.415 0 0.665 n y n ruditapes2_c2236 ? 0.415 0 0.663 n y n ruditapes_c30792 ? 0.415 0 0.663 n y n ruditapes_c31568 ? 0.415 0 0.663 n y n ruditapes2_lrc6316 -3.283 0.415 1.81 0.551 n y n ruditapes_c29219 -3.447 0.415 1.718 0.498 n y n ruditapes_c18968 -11.119 0.415 0.878 0.079 n y n ruditapes_c15120 -12.231 0.415 0.854 0.07 n y n ruditapes_s38512 1.286 0.416 17.493 22.503 n n n ruditapes_c5892 -1.427 0.416 cathepsin l /// 0008234 // cysteine-type peptidase activity /// 0032502 // developmental process /// 0009987 // cellular process 13.062 9.152 n n n ruditapes_c31057 -1.465 0.416 11.412 7.787 n n n ruditapes2_c2630 -1.608 0.416 7.727 4.805 n y n ruditapes_c23389 -1.721 0.416 6.095 3.542 n y n ruditapes_c23409 2.377 0.416 1.162 2.762 n y n ruditapes_c7731 2.428 0.416 nucleolar complex associated 4 homolog ( cerevisiae) /// 0016020 // membrane /// 0005515 // protein binding /// 0044424 // intracellular part 1.096 2.661 n y n ruditapes_c18644 -1.863 0.416 4.843 2.599 n y n ruditapes_c23136 3.148 0.416 0.59 1.857 n y n ruditapes_c3375 -2.103 0.416 3.611 1.717 n y n ruditapes2_c1515 -2.641 0.416 2.393 0.906 n y n ruditapes_s33419 ? 0.416 chymotrypsin bi /// 0008236 // serine-type peptidase activity 0 0.662 n y n ruditapes_lrc32422 -3.177 0.416 calcium binding protein 1 1.874 0.59 n y n ruditapes2_lrc4498 -3.283 0.416 nadh dehydrogenase 1 beta subcomplex 3 /// 0016491 // oxidoreductase activity 1.799 0.548 n y n ruditapes2_c1026 -3.855 0.416 1.534 0.398 n y n ruditapes_lrc37326 -4.765 0.416 1.29 0.271 n y n ruditapes_c12115 -5.93 0.416 1.124 0.19 n y n ruditapes_c28586 -8.45 0.416 0.955 0.113 n y n ruditapes_c11062 -13.343 0.416 ptsp-like peptide neurotransmitter precursor 0.834 0.062 n y n ruditapes_c3432 -20.014 0.416 0.772 0.039 n y n ruditapes_c28908 -? 0.416 0.663 0 n y n ruditapes_c23756 -1.544 0.417 9.017 5.839 n y n ruditapes_c2686 -1.545 0.417 8.968 5.803 n y n ruditapes_c1496 -1.556 0.417 PREDICTED: hypothetical protein [Ciona intestinalis] 8.755 5.628 n y n ruditapes_c15364 -1.586 0.417 8.078 5.092 n y n ruditapes_c19895 -1.727 0.417 trna methyltransferase 11 6.008 3.479 n y n ruditapes_lrc20915 -1.878 0.417 4.724 2.516 n y n ruditapes_c616 -1.973 0.417 pyruvate dehydrogenase 4.166 2.111 n y n ruditapes_c24942 -2.16 0.417 3.396 1.572 n y n ruditapes_c30122 -2.174 0.417 3.348 1.54 n y n ruditapes_c1825 4.797 0.417 0.263 1.261 n y n ruditapes_c5928 -2.426 0.417 2.731 1.126 n y n ruditapes_c18686 -2.571 0.417 2.476 0.963 n y n ruditapes2_c2653 8.994 0.417 glutathione transferase omega-1 0.103 0.922 n y n ruditapes_lrc12186 -2.687 0.417 2.317 0.862 n y n ruditapes_c10246 -2.729 0.417 2.266 0.83 n y n ruditapes_lrc21751 -2.859 0.417 ferritin-like protein 2.122 0.742 n y n ruditapes_c25951 ? 0.417 0 0.66 n y n ruditapes_c31673 ? 0.417 0 0.66 n y n ruditapes_c14474 ? 0.417 0 0.658 n y n ruditapes_s38759 -3.706 0.417 nadh dehydrogenase 1 beta 8kda 1.578 0.426 n y n ruditapes_c16501 -3.892 0.417 1.512 0.388 n y n ruditapes_c20714 -5.782 0.417 1.133 0.196 n y n ruditapes_c10616 -6.671 0.417 major facilitator superfamily domain containing partial 1.054 0.158 n y n ruditapes_c22354 -12.231 0.417 0.847 0.069 n y n ruditapes2_lrc7490 -1.303 0.418 22.654 17.391 n n n ruditapes_c12299 -1.393 0.418 14.686 10.539 n n n ruditapes_c15154 -1.42 0.418 13.275 9.349 n n n ruditapes_c6362 -1.448 0.418 11.996 8.283 n n n ruditapes2_c811 -1.496 0.418 very low-density lipoprotein receptor 10.281 6.874 n n n ruditapes_c7743 -1.608 0.418 7.643 4.754 n y n ruditapes_c12704 -1.698 0.418 6.318 3.721 n y n ruditapes_c7346 -1.73 0.418 5.966 3.449 n y n ruditapes2_c2300 -1.773 0.418 5.522 3.114 n y n ruditapes2_c726 -1.87 0.418 kallikrein plasma (fletcher factor) 1 4.746 2.538 n y n ruditapes_c11280 -1.977 0.418 4.118 2.083 n y n ruditapes_c11465 3.983 0.418 0.365 1.455 n y n ruditapes_c22545 -2.669 0.418 2.336 0.875 n y n ruditapes_c18679 ? 0.418 0 0.656 n y n ruditapes_c18745 -3.262 0.418 polymerase ii (dna directed) polypeptide "/// 0003899 // DNA-directed RNA polymerase activity /// 0005665 // DNA-directed RNA polymerase II, core complex /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005666 // DNA-directed RNA polymerase III complex /// 0003677 // DNA binding /// 0046983 // protein dimerization activity /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0000398 // nuclear mRNA splicing, via spliceosome" 1.803 0.553 n y n ruditapes2_lrc4202 -3.336 0.418 1.751 0.525 n y n ruditapes_c20035 -3.706 0.418 1.576 0.425 n y n ruditapes_c18104 -4.2 0.418 1.408 0.335 n y n ruditapes_c5501 -4.67 0.418 1.295 0.277 n y n ruditapes_lrc9086 -4.726 0.418 GE19184 [Drosophila yakuba] 1.288 0.273 n y n ruditapes2_lrc5712 -7.042 0.418 1.021 0.145 n y n ruditapes2_c2249 -1.514 0.419 9.71 6.415 n y n ruditapes_c10434 -1.693 0.419 6.344 3.747 n y n ruditapes_c17502 -1.715 0.419 6.101 3.558 n y n ruditapes_c23451 -1.87 0.419 4.722 2.524 n y n ruditapes_c13541 -1.873 0.419 cytochrome p450 family 4 /// 0046872 // metal ion binding 4.711 2.516 n y n ruditapes_c2487 -2.116 0.419 glutathione s-transferase a 3.508 1.658 n y n ruditapes_c24912 -2.125 0.419 3.479 1.637 n y n ruditapes_c698 -2.147 0.419 3.409 1.588 n y n ruditapes2_c1415 3.597 0.419 0.441 1.586 n y n ruditapes_c27217 -2.156 0.419 3.381 1.568 n y n ruditapes_c27898 -2.156 0.419 3.381 1.568 n y n ruditapes_c15078 -2.188 0.419 3.28 1.499 n y n ruditapes_c29036 -2.287 0.419 3.008 1.315 n y n ruditapes_lrc34302 -2.355 0.419 astacin-like squid metalloprotease type iii 2.856 1.213 n y n ruditapes2_c804 -3.459 0.419 1.678 0.485 n y n ruditapes_c21693 -4.13 0.419 1.424 0.345 n y n ruditapes_lrc9608 -4.448 0.419 1.343 0.302 n y n ruditapes_c7766 -11.119 0.419 0.862 0.078 n y n ruditapes_c26994 -? 0.419 0.653 0 n y n ruditapes2_lrc5084 -? 0.419 0.652 0 n y n ruditapes2_c1923 -1.179 0.42 56.836 48.225 n n n ruditapes2_c2994 -1.486 0.42 10.521 7.081 n n n ruditapes_c21869 -1.487 0.42 10.496 7.057 n n n ruditapes_c5575 -1.627 0.42 rae1 rna export 1 homolog ( pombe) /// 0005640 // nuclear outer membrane /// 0005856 // cytoskeleton /// 0006406 // mRNA export from nucleus /// 0005643 // nuclear pore /// 0005737 // cytoplasm /// 0003723 // RNA binding /// 0008017 // microtubule binding 7.273 4.469 n y n ruditapes_c27003 -1.641 0.42 7.038 4.289 n y n ruditapes2_lrc3549 -1.67 0.42 apolipophorin precursor protein 6.609 3.956 n y n ruditapes_c2833 2.01 0.42 1.885 3.788 n y n ruditapes_c21481 -1.706 0.42 6.183 3.625 n y n ruditapes2_c5420 -2.027 0.42 protein 3.851 1.9 n y n ruditapes_c18377 -2.172 0.42 3.321 1.529 n y n ruditapes_c31345 -2.527 0.42 2.516 0.996 n y n ruditapes_c24479 ? 0.42 0 0.651 n y n ruditapes_c26430 -3.558 0.42 1.623 0.456 n y n ruditapes_c20551 -5.337 0.42 1.174 0.22 n y n ruditapes_c8256 -7.227 0.42 1.003 0.139 n y n ruditapes_c28287 -? 0.42 0.65 0 n y n ruditapes_c29781 -? 0.42 0.65 0 n y n ruditapes2_c3208 -1.254 0.421 ubiquitin-conjugating enzyme e2d 3 (ubc4 5 yeast) isoform cra_a /// 0040007 // growth /// 0002119 // nematode larval development /// 0030509 // BMP signaling pathway /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0031625 // ubiquitin protein ligase binding /// 0051276 // chromosome organization /// 0048477 // oogenesis /// 0008340 // determination of adult lifespan /// 0007140 // male meiosis /// 0040011 // locomotion /// 0016567 // protein ubiquitination /// 0040035 // hermaphrodite genitalia development /// 0007286 // spermatid development /// 0045676 // regulation of R7 cell differentiation /// 0004842 // ubiquitin-protein ligase activity /// 0007067 // mitosis /// 0009792 // embryonic development ending in birth or egg hatching 30.172 24.061 n n n ruditapes2_c734 -1.294 0.421 23.451 18.119 n n n ruditapes2_c158 -1.332 0.421 upf0197 protein c11orf10 homolog /// 0016021 // integral to membrane 19.133 14.365 n n n ruditapes2_c1957 -1.342 0.421 18.172 13.536 n n n ruditapes_c2626 1.617 0.421 protein 4.337 7.012 n y n ruditapes_c9642 -1.562 0.421 8.446 5.406 n y n ruditapes_lrc33316 1.782 0.421 elongation factor 1-beta /// 0044444 // cytoplasmic part 2.884 5.14 n y n ruditapes2_c72 -1.816 0.421 microsomal glutathione s-transferase 1 /// 0033327 // Leydig cell differentiation /// 0005778 // peroxisomal membrane /// 0042493 // response to drug /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005634 // nucleus /// 0032496 // response to lipopolysaccharide /// 0045177 // apical part of cell /// 0005743 // mitochondrial inner membrane /// 0005783 // endoplasmic reticulum /// 0005792 // microsome /// 0010243 // response to organic nitrogen /// 0042803 // protein homodimerization activity 5.087 2.801 n y n ruditapes2_lrc3235 2.453 0.421 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.045 2.564 n y n ruditapes_lrc20644 -1.943 0.421 4.255 2.19 n y n ruditapes_c4922 -1.942 0.421 4.254 2.19 n y n ruditapes_c19090 -1.981 0.421 4.041 2.04 n y n ruditapes_c4423 -2.159 0.421 member ras oncogene family /// 0006810 // transport /// 0016020 // membrane /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005764 // lysosome /// 0045453 // bone resorption /// 0005770 // late endosome 3.346 1.549 n y n ruditapes_c21480 -2.859 0.421 2.088 0.73 n y n ruditapes_s40094 ? 0.421 ribosomal protein s27a /// 0044267 // cellular protein metabolic process /// 0034961 // cellular biopolymer biosynthetic process /// 0005840 // ribosome /// 0010467 // gene expression 0 0.648 n y n ruditapes_c25604 -3.113 0.421 1.877 0.603 n y n ruditapes_lrc33029 -3.663 0.421 1.572 0.429 n y n ruditapes_c6299 -4.448 0.421 countin-like protein 1.331 0.299 n y n ruditapes_lrc33278 -? 0.421 keratin associated protein 19-3 0.649 0 n y n ruditapes_c17064 -? 0.421 0.648 0 n y n ruditapes2_c120 -1.135 0.422 hypothetical protein BRAFLDRAFT_129258 [Branchiostoma floridae] 94.944 83.622 n n n ruditapes_c3264 -1.227 0.422 36.733 29.946 n n n ruditapes2_c2990 1.399 0.422 9.35 13.077 n n n ruditapes_c15017 -1.493 0.422 10.182 6.818 n n n ruditapes_c23401 -1.503 0.422 9.894 6.582 n y n ruditapes_c2359 -1.508 0.422 9.768 6.477 n y n ruditapes_c2661 -1.562 0.422 8.43 5.399 n y n ruditapes2_c179 -1.677 0.422 6.463 3.854 n y n ruditapes_c16287 -1.701 0.422 6.193 3.642 n y n ruditapes_c31808 -1.779 0.422 5.383 3.026 n y n ruditapes_lrc35057 -1.804 0.422 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 5.161 2.861 n y n ruditapes_c9938 3.035 0.422 0.621 1.885 n y n ruditapes_c8517 -2.175 0.422 3.275 1.505 n y n ruditapes_c16066 -2.7 0.422 octopine dehydrogenase "/// 0050662 // coenzyme binding /// 0008152 // metabolic process /// 0016646 // oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor" 2.259 0.836 n y n ruditapes_c24531 12.142 0.422 0.068 0.829 n y n ruditapes_c12980 ? 0.422 sorbitol dehydrogenase /// 0003939 // L-iditol 2-dehydrogenase activity /// 0005529 // sugar binding /// 0006062 // sorbitol catabolic process /// 0005624 // membrane fraction /// 0051287 // NAD or NADH binding /// 0006006 // glucose metabolic process /// 0005625 // soluble fraction /// 0005615 // extracellular space /// 0046370 // fructose biosynthetic process /// 0030317 // sperm motility /// 0008270 // zinc ion binding /// 0051160 // L-xylitol catabolic process 0 0.644 n y n ruditapes_c19667 -4.2 0.422 1.387 0.33 n y n ruditapes_c17429 -4.225 0.422 1.377 0.326 n y n ruditapes_c28628 -22.238 0.422 0.74 0.033 n y n ruditapes_c10011 -? 0.422 0.645 0 n y n ruditapes_c11508 -? 0.422 0.645 0 n y n ruditapes_c13182 -? 0.422 0.645 0 n y n ruditapes2_lrc4121 1.059 0.423 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0006396 // RNA processing /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 300.721 318.583 n n n ruditapes_c30901 -1.079 0.423 elongation factor 1 alpha /// 0006414 // translational elongation /// 0005525 // GTP binding /// 0005515 // protein binding /// 0005829 // cytosol /// 0005853 // eukaryotic translation elongation factor 1 complex 278.615 258.244 n n n ruditapes_c17862 -1.277 0.423 25.699 20.126 n n n ruditapes_c4701 -1.352 0.423 17.173 12.698 n n n ruditapes_c4484 -1.385 0.423 14.871 10.735 n n n ruditapes_c18168 -1.412 0.423 13.408 9.499 n n n ruditapes2_c890 -1.419 0.423 13.022 9.176 n n n ruditapes2_c2088 -1.498 0.423 9.987 6.665 n n n ruditapes_c18351 -1.571 0.423 8.163 5.195 n y n ruditapes_c10436 -1.628 0.423 7.162 4.398 n y n ruditapes_c19000 2.069 0.423 sialic acid acetylesterase 1.697 3.51 n y n ruditapes2_c1172 5.396 0.423 0.211 1.139 n y n ruditapes_c38717 5.696 0.423 0.194 1.105 n y n ruditapes_c23341 ? 0.423 0 0.643 n y n ruditapes_c10621 ? 0.423 0 0.641 n y n ruditapes_lrc32338 -3.614 0.423 cellular retinoic acid binding protein 1.583 0.438 n y n ruditapes_c25480 -4.448 0.423 1.315 0.296 n y n ruditapes2_c879 -6.177 0.423 1.066 0.173 n y n ruditapes_c20592 -11.119 0.423 0.847 0.076 n y n ruditapes_c13870 -? 0.423 0.642 0 n y n ruditapes_lrc30640 -1.312 0.424 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 20.964 15.983 n n n ruditapes_c1034 -1.326 0.424 19.48 14.691 n n n ruditapes_c14260 -1.465 0.424 11.07 7.556 n n n ruditapes_c12887 2.412 0.424 1.079 2.602 n y n ruditapes_c25225 -1.846 0.424 4.794 2.597 n y n ruditapes_c14341 -1.876 0.424 4.582 2.442 n y n ruditapes_c4223 3.822 0.424 nadh-ubiquinone oxidoreductase b8 subunit 0.384 1.47 n y n ruditapes_c26732 -2.594 0.424 2.376 0.916 n y n ruditapes_c10973 13.94 0.424 0.057 0.792 n y n ruditapes_c22901 -3.336 0.424 phosphomannomutase /// 0004615 // phosphomannomutase activity /// 0019307 // mannose biosynthetic process /// 0005737 // cytoplasm /// 0016787 // hydrolase activity 1.706 0.512 n y n ruditapes2_c828 -4.043 0.424 1.42 0.351 n y n ruditapes2_c2551 -4.33 0.424 1.341 0.31 n y n ruditapes_c10643 -4.448 0.424 echinoderm microtubule-associated 5- partial 1.313 0.295 n y n ruditapes_c20365 -12.231 0.424 0.821 0.067 n y n ruditapes_c8538 -22.238 0.424 0.735 0.033 n y n ruditapes_c31527 -? 0.424 0.639 0 n y n ruditapes_c31892 -? 0.424 0.639 0 n y n ruditapes_c8941 -1.332 0.425 18.798 14.115 n n n ruditapes_lrc34835 -1.366 0.425 cytochrome c oxidase subunit via polypeptide 1 /// 0006091 // generation of precursor metabolites and energy /// 0005743 // mitochondrial inner membrane 15.984 11.698 n n n ruditapes_lrc21852 1.428 0.425 8.122 11.598 n n n ruditapes2_c327 -1.405 0.425 eukaryotic translation initiation factor subunit k /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0005829 // cytosol 13.623 9.693 n n n ruditapes2_c3049 -1.494 0.425 10.03 6.713 n n n ruditapes2_c3051 -1.751 0.425 5.554 3.172 n y n ruditapes_c7909 -1.764 0.425 peptidylglycine alpha-hydroxylating monooxygenase "/// 0046914 // transition metal ion binding /// 0051087 // chaperone binding /// 0001700 // embryonic development via the syncytial blastoderm /// 0043283 // biopolymer metabolic process /// 0030708 // germarium-derived female germ-line cyst encapsulation /// 0005730 // nucleolus /// 0016715 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen /// 0006518 // peptide metabolic process /// 0035186 // syncytial blastoderm mitotic cell cycle /// 0021954 // central nervous system neuron development /// 0006697 // ecdysone biosynthetic process /// 0005783 // endoplasmic reticulum /// 0035102 // PRC1 complex /// 0030713 // ovarian follicle cell stalk formation /// 0035302 // ecdysteroid 25-hydroxylase activity /// 0003682 // chromatin binding /// 0016458 // gene silencing /// 0035075 // response to ecdysone" 5.446 3.087 n y n ruditapes_c14737 2.305 0.425 1.217 2.806 n y n ruditapes2_lrc3758 2.536 0.425 cytosolic malate dehydrogenase "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0044237 // cellular metabolic process /// 0005737 // cytoplasm /// 0016615 // malate dehydrogenase activity" 0.944 2.393 n y n ruditapes_c24106 -1.925 0.425 4.268 2.217 n y n ruditapes_c12237 -1.964 0.425 4.065 2.069 n y n ruditapes_c16439 -2.038 0.425 3.722 1.826 n y n ruditapes2_c1310 -2.076 0.425 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 3.579 1.725 n y n ruditapes_c21044 -2.224 0.425 gephyrin /// 0007529 // establishment of synaptic specificity at neuromuscular junction /// 0005515 // protein binding /// 0044459 // plasma membrane part /// 0005622 // intracellular 3.088 1.388 n y n ruditapes_c22036 5.096 0.425 0.23 1.173 n y n ruditapes_c17936 -2.363 0.425 2.757 1.167 n y n ruditapes_c7472 -2.366 0.425 2.759 1.166 n y n ruditapes_c10540 -2.885 0.425 2.032 0.704 n y n ruditapes_c29713 ? 0.425 0 0.637 n y n ruditapes_c6412 -4.65 0.425 1.262 0.271 n y n ruditapes2_c2559 -5.083 0.425 1.189 0.234 n y n ruditapes_c28228 -5.337 0.425 1.151 0.216 n y n ruditapes_c7305 -12.231 0.425 0.818 0.067 n y n ruditapes_c1994 -1.255 0.426 29.306 23.354 n n n ruditapes2_c537 -1.478 0.426 hydroxyacyl-coenzyme a mitochondrial precursor /// 0005488 // binding /// 0006629 // lipid metabolic process /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity /// 0005743 // mitochondrial inner membrane 10.516 7.114 n n n ruditapes_c21902 -1.483 0.426 10.382 7.003 n n n ruditapes_lrc17742 -1.591 0.426 7.686 4.832 n y n ruditapes2_c1651 -1.594 0.426 lipoprotein lipase /// 0005576 // extracellular region /// 0004091 // carboxylesterase activity /// 0006629 // lipid metabolic process /// 0016298 // lipase activity /// 0009987 // cellular process 7.617 4.777 n y n ruditapes_c13475 -1.692 0.426 riken cdna 1700019e19 6.163 3.642 n y n ruditapes_c16317 -1.745 0.426 5.604 3.212 n y n ruditapes2_c2853 -1.784 0.426 5.233 2.934 n y n ruditapes_c24029 2.409 0.426 1.072 2.582 n y n ruditapes_c21457 -1.932 0.426 4.208 2.178 n y n ruditapes_c18202 -2.046 0.426 opioid growth factor receptor-like 1 3.668 1.793 n y n ruditapes_c8982 -2.172 0.426 3.234 1.489 n y n ruditapes_c22193 -2.175 0.426 3.214 1.477 n y n ruditapes_c935 -2.292 0.426 myospheroid /// 0005488 // binding 2.907 1.268 n y n ruditapes2_c5183 -2.32 0.426 prefoldin subunit 1 /// 0005737 // cytoplasm 2.845 1.226 n y n ruditapes_lrc17952 5.096 0.426 0.229 1.168 n y n ruditapes_lrc39098 -2.718 0.426 2.191 0.806 n y n ruditapes_c13650 -2.965 0.426 1.947 0.657 n y n ruditapes_c28990 -2.965 0.426 1.946 0.656 n y n ruditapes_c29673 ? 0.426 selenium-binding /// 0008430 // selenium binding 0 0.634 n y n ruditapes_c10666 ? 0.426 0 0.633 n y n ruditapes_c27160 ? 0.426 0 0.633 n y n ruditapes_c9422 -3.139 0.426 1.815 0.578 n y n ruditapes_c31841 -5.083 0.426 a chain crystal structures of human pyruvate dehydrogenase kinase 2 containing physiological and synthetic ligands /// 0005524 // ATP binding /// 0018106 // peptidyl-histidine phosphorylation /// 0005739 // mitochondrion /// 0005730 // nucleolus /// 0005515 // protein binding /// 0006006 // glucose metabolic process /// 0000155 // two-component sensor activity /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity /// 0007165 // signal transduction 1.18 0.232 n y n ruditapes_c21042 -5.559 0.426 1.117 0.201 n y n ruditapes2_lrc3719 -12.231 0.426 keratin associated protein 19-3 0.816 0.067 n y n ruditapes_c14060 -12.231 0.426 0.816 0.067 n y n ruditapes_c23597 -? 0.426 0.634 0 n y n ruditapes_c25879 -? 0.426 0.634 0 n y n ruditapes2_c4069 1.047 0.427 ribosomal protein s12 /// 0006414 // translational elongation /// 0005739 // mitochondrion /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 450.752 471.773 n n n ruditapes2_c1360 -1.181 0.427 small subunit ribosomal protein 25 /// 0005840 // ribosome 53.939 45.683 n n n ruditapes_c27515 -1.35 0.427 17.067 12.641 n n n ruditapes_c8631 -1.354 0.427 16.778 12.395 n n n ruditapes_c26211 -1.423 0.427 12.608 8.859 n n n ruditapes_c21590 1.622 0.427 4.17 6.764 n y n ruditapes_c11059 2.047 0.427 integrator complex subunit 2 /// 0016180 // snRNA processing /// 0016020 // membrane /// 0005515 // protein binding /// 0032039 // integrator complex 1.722 3.524 n y n ruditapes_c1951 -1.761 0.427 5.411 3.072 n y n ruditapes_c5282 2.345 0.427 1.15 2.696 n y n ruditapes_c20648 -2.085 0.427 3.515 1.686 n y n ruditapes_c21066 -2.224 0.427 3.072 1.382 n y n ruditapes_c13075 4.16 0.427 general transcription factor polypeptide 62kda 0.324 1.349 n y n ruditapes_c23469 -2.611 0.427 2.322 0.889 n y n ruditapes_c22183 -2.804 0.427 atp synthase mitochondrial f1 complex assembly factor 2 2.094 0.747 n y n ruditapes_c15276 -2.875 0.427 2.022 0.704 n y n ruditapes_c29600 ? 0.427 0 0.631 n y n ruditapes_c27093 -5.559 0.427 1.115 0.201 n y n ruditapes_c17487 -6.115 0.427 1.052 0.172 n y n ruditapes2_c2133 -6.393 0.427 1.032 0.161 n y n ruditapes_c28755 -6.671 0.427 1.008 0.151 n y n ruditapes2_lrc5441 -8.154 0.427 0.923 0.113 n y n ruditapes2_c1649 -8.895 0.427 0.892 0.1 n y n ruditapes2_c1369 -13.343 0.427 0.793 0.059 n y n ruditapes_lrc10150 -13.343 0.427 0.793 0.059 n y n ruditapes2_lrc6296 -33.357 0.427 calponin-like protein 0.691 0.021 n y n ruditapes_c17847 -? 0.427 0.631 0 n y n ruditapes_c28028 -1.249 0.428 30.324 24.287 n n n ruditapes_c20422 1.39 0.428 9.516 13.224 n n n ruditapes_c23434 -1.623 0.428 7.089 4.367 n y n ruditapes_c10035 -1.668 0.428 6.419 3.849 n y n ruditapes_c20038 2.272 0.428 1.25 2.84 n y n ruditapes_c17991 -2.107 0.428 3.417 1.622 n y n ruditapes2_c2002 -2.224 0.428 eukaryotic translation initiation factor isoform 3 /// 0044238 // primary metabolic process /// 0008026 // ATP-dependent helicase activity /// 0010467 // gene expression /// 0000166 // nucleotide binding /// 0003723 // RNA binding /// 0044424 // intracellular part /// 0034960 // cellular biopolymer metabolic process 3.055 1.374 n y n ruditapes_c13945 -2.48 0.428 taf9b rna polymerase tata box binding protein -associated 31kda "/// 0006355 // regulation of transcription, DNA-dependent /// 0006352 // transcription initiation /// 0005669 // transcription factor TFIID complex /// 0003677 // DNA binding /// 0003743 // translation initiation factor activity" 2.511 1.012 n y n ruditapes2_c604 -2.541 0.428 trove domain member 2 /// 0040010 // positive regulation of growth rate /// 0005634 // nucleus /// 0005515 // protein binding /// 0003676 // nucleic acid binding 2.41 0.948 n y n ruditapes2_c5205 ? 0.428 c-type lectin 1 /// 0005488 // binding /// 0009987 // cellular process 0 0.629 n y n ruditapes_c22653 ? 0.428 methyltransferase type 11 0 0.628 n y n ruditapes_c30440 ? 0.428 0 0.627 n y n ruditapes_c31308 ? 0.428 0 0.627 n y n ruditapes2_c301 -3.212 0.428 1.751 0.545 n y n ruditapes_lrc17093 -3.437 0.428 1.63 0.474 n y n ruditapes_c29143 -4.2 0.428 1.347 0.321 n y n ruditapes_c22709 -4.892 0.428 1.202 0.246 n y n ruditapes_c15970 -7.227 0.428 0.966 0.134 n y n ruditapes_c20799 -8.154 0.428 0.921 0.113 n y n ruditapes_c6982 -15.566 0.428 aldolase fructose-bisphosphate "/// 0030388 // fructose 1, 6-bisphosphate metabolic process /// 0019861 // flagellum /// 0005739 // mitochondrion /// 0006941 // striated muscle contraction /// 0005634 // nucleus /// 0006096 // glycolysis /// 0042802 // identical protein binding /// 0015629 // actin cytoskeleton /// 0031674 // I band /// 0032496 // response to lipopolysaccharide /// 0070062 // extracellular vesicular exosome /// 0003779 // actin binding /// 0035094 // response to nicotine /// 0007015 // actin filament organization /// 0009408 // response to heat /// 0004332 // fructose-bisphosphate aldolase activity /// 0070061 // fructose binding /// 0046716 // muscle maintenance /// 0006754 // ATP biosynthetic process /// 0043627 // response to estrogen stimulus /// 0008360 // regulation of cell shape /// 0015631 // tubulin binding" 0.765 0.049 n y n ruditapes2_lrc3326 -17.79 0.428 0.746 0.042 n y n ruditapes_c26320 -17.79 0.428 nlgn4 isoform 5 /// 0042043 // neurexin binding /// 0005634 // nucleus /// 0009986 // cell surface /// 0035176 // social behavior /// 0005887 // integral to plasma membrane /// 0050808 // synapse organization /// 0031404 // chloride ion binding /// 0042803 // protein homodimerization activity 0.746 0.042 n y n ruditapes_c10376 -20.014 0.428 0.731 0.037 n y n ruditapes_c29871 -? 0.428 0.629 0 n y n ruditapes_c29316 -? 0.428 0.628 0 n y n ruditapes_c176 -1.325 0.429 19.126 14.431 n n n ruditapes2_c2904 -1.494 0.429 9.848 6.591 n n n ruditapes_c15398 -1.576 0.429 7.864 4.99 n y n ruditapes_c14330 -1.621 0.429 7.065 4.357 n y n ruditapes_c12181 -1.656 0.429 6.541 3.949 n y n ruditapes_c3429 9.893 0.429 0.086 0.851 n y n ruditapes_c22489 -2.817 0.429 2.058 0.731 n y n ruditapes_lrc13281 -2.965 0.429 cdgsh iron sulfur domain-containing protein 1 1.924 0.649 n y n ruditapes_c31008 -2.994 0.429 1.901 0.635 n y n ruditapes_c8725 ? 0.429 0 0.626 n y n ruditapes2_c3063 -3.113 0.429 1.808 0.581 n y n ruditapes_c19952 -3.841 0.429 1.452 0.378 n y n ruditapes_lrc37060 -4.043 0.429 ribosomal protein l4 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.39 0.344 n y n ruditapes_c8856 -5.054 0.429 1.171 0.232 n y n ruditapes_c28840 -5.559 0.429 1.105 0.199 n y n ruditapes_c9256 -8.895 0.429 0.887 0.1 n y n ruditapes_c19699 -? 0.429 0.626 0 n y n ruditapes_c9782 -? 0.429 0.626 0 n y n ruditapes_c27383 1.512 0.43 5.777 8.735 n y n ruditapes2_c3430 -1.426 0.43 12.331 8.646 n n n ruditapes_c20794 -1.45 0.43 11.325 7.813 n n n ruditapes_c4893 -1.612 0.43 yellow cameleon 7.207 4.471 n y n ruditapes_lrc34626 2.268 0.43 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 1.249 2.834 n y n ruditapes_c19119 -1.847 0.43 4.664 2.525 n y n ruditapes2_c1799 -1.915 0.43 4.238 2.213 n y n ruditapes2_c2833 -2.11 0.43 3.379 1.601 n y n ruditapes_c7450 -2.375 0.43 mitochondrial import inner membrane translocase subunit tim10 /// 0005488 // binding /// 0006886 // intracellular protein transport /// 0016020 // membrane /// 0005740 // mitochondrial envelope 2.674 1.126 n y n ruditapes_c23435 -2.458 0.43 2.525 1.027 n y n ruditapes_c30973 11.242 0.43 0.073 0.817 n y n ruditapes2_lrc3622 -2.697 0.43 translationally controlled tumor protein 2.182 0.809 n y n ruditapes_lrc39124 -2.761 0.43 2.108 0.764 n y n ruditapes_c21070 -3.336 0.43 lin-7 homolog c /// 0015031 // protein transport /// 0035003 // subapical complex /// 0019717 // synaptosome /// 0045211 // postsynaptic membrane /// 0005515 // protein binding /// 0007269 // neurotransmitter secretion /// 0005923 // tight junction /// 0004872 // receptor activity /// 0006887 // exocytosis 1.667 0.5 n y n ruditapes_c28100 -3.614 0.43 1.529 0.423 n y n ruditapes_c28527 -3.953 0.43 1.411 0.357 n y n ruditapes_c16515 -4.726 0.43 1.223 0.259 n y n ruditapes_c26080 -4.892 0.43 1.192 0.244 n y n ruditapes_c8823 -6.115 0.43 1.042 0.17 n y n ruditapes2_c2195 -6.671 0.43 0.994 0.149 n y n ruditapes_c21752 -17.79 0.43 0.741 0.042 n y n ruditapes2_c2829 -? 0.43 0.624 0 n y n ruditapes_c25639 -? 0.43 0.624 0 n y n ruditapes_c10614 -? 0.43 0.623 0 n y n ruditapes2_c1925 -1.303 0.431 21.306 16.348 n n n ruditapes_c12605 1.611 0.431 4.228 6.81 n y n ruditapes_c22077 1.855 0.431 2.374 4.403 n y n ruditapes_c23285 -1.68 0.431 6.188 3.684 n y n ruditapes_lrc9369 -1.822 0.431 brevican isoform 1 /// 0045202 // synapse /// 0044446 // intracellular organelle part /// 0044444 // cytoplasmic part /// 0032501 // multicellular organismal process /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane /// 0009987 // cellular process 4.814 2.642 n y n ruditapes_c28256 -2.32 0.431 rtdr1-prov protein 2.781 1.198 n y n ruditapes_c5198 11.242 0.431 0.072 0.812 n y n ruditapes_lrc36101 -2.965 0.431 1.906 0.643 n y n ruditapes_c23692 ? 0.431 hypothetical protein BRAFLDRAFT_69334 [Branchiostoma floridae] 0 0.62 n y n ruditapes_c19743 ? 0.431 0 0.619 n y n ruditapes_lrc34890 -3.191 0.431 60s ribosomal protein l10a /// 0044444 // cytoplasmic part /// 0007052 // mitotic spindle organization 1.743 0.546 n y n ruditapes_c7086 -3.892 0.431 1.42 0.365 n y n ruditapes_c20806 -4.003 0.431 1.389 0.347 n y n ruditapes_c18218 -4.2 0.431 1.333 0.317 n y n ruditapes_c18545 -5.401 0.431 1.113 0.206 n y n ruditapes_c5506 -5.559 0.431 1.091 0.196 n y n ruditapes_s38335 -5.782 0.431 hypothetical protein PE36_03526 [Moritella sp. PE36] 1.07 0.185 n y n ruditapes_c23885 -5.93 0.431 1.054 0.178 n y n ruditapes_c6192 -15.566 0.431 0.756 0.049 n y n ruditapes2_c1243 -? 0.431 0.62 0 n y n ruditapes_lrc37039 -1.111 0.432 ribosomal protein s6 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006955 // immune response 134.194 120.779 n n n ruditapes_c12718 -1.302 0.432 21.354 16.397 n n n ruditapes_lrc36284 -1.33 0.432 ribosomal protein l12 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 18.48 13.9 n n n ruditapes_c12455 -1.42 0.432 12.482 8.789 n n n ruditapes_c18281 -1.448 0.432 11.303 7.806 n n n ruditapes_c8251 1.857 0.432 proteasome 26s atpase subunit 3 /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0048471 // perinuclear region of cytoplasm /// 0000502 // proteasome complex /// 0003714 // transcription corepressor activity /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0001824 // blastocyst development /// 0017111 // nucleoside-triphosphatase activity /// 0005829 // cytosol /// 0044419 // interspecies interaction between organisms 2.35 4.363 n y n ruditapes_c31913 -1.77 0.432 5.234 2.958 n y n ruditapes_c5293 -1.808 0.432 proteasome alpha 4 subunit /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0042802 // identical protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 4.902 2.712 n y n ruditapes_c13698 -1.817 0.432 4.83 2.658 n y n ruditapes_c6538 2.407 0.432 1.046 2.519 n y n ruditapes_c37175 2.648 0.432 0.82 2.171 n y n ruditapes_c25658 -2.01 0.432 cdk5 regulatory subunit associated protein 1 /// 0019901 // protein kinase binding /// 0050794 // regulation of cellular process /// 0045859 // regulation of protein kinase activity 3.732 1.857 n y n ruditapes_c12256 3.019 0.432 presenilin sel-12 /// 0016324 // apical plasma membrane /// 0048190 // wing disc dorsal/ventral pattern formation /// 0007242 // intracellular signaling cascade /// 0007010 // cytoskeleton organization /// 0016337 // cell-cell adhesion /// 0016021 // integral to membrane /// 0007220 // Notch receptor processing /// 0006509 // membrane protein ectodomain proteolysis /// 0005938 // cell cortex 0.602 1.817 n y n ruditapes_s40358 -2.089 0.432 3.416 1.635 n y n ruditapes_c13960 -2.168 0.432 3.155 1.455 n y n ruditapes_c14325 -2.168 0.432 3.155 1.455 n y n ruditapes_c13842 -2.185 0.432 3.114 1.425 n y n ruditapes_c28404 4.197 0.432 0.312 1.309 n y n ruditapes_c19772 4.647 0.432 nitrogen fixation protein /// 0005515 // protein binding /// 0005506 // iron ion binding /// 0016226 // iron-sulfur cluster assembly /// 0051536 // iron-sulfur cluster binding 0.261 1.212 n y n ruditapes_c19383 4.857 0.432 loc495692 protein /// 0009987 // cellular process /// 0044464 // cell part 0.242 1.174 n y n ruditapes2_c1063 5.396 0.432 0.203 1.098 n y n ruditapes_c10800 -2.395 0.432 2.619 1.094 n y n ruditapes_c8710 10.343 0.432 0.08 0.826 n y n ruditapes2_lrc3703 -2.669 0.432 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 2.201 0.825 n y n ruditapes_c13319 -2.914 0.432 sacsin 1.946 0.668 n y n ruditapes_c24926 ? 0.432 coiled-coil and c2 domain containing 2a /// 0007601 // visual perception /// 0050896 // response to stimulus /// 0005737 // cytoplasm 0 0.618 n y n ruditapes_lrc18792 -3.262 0.432 1.691 0.518 n y n ruditapes_lrc36859 -6.671 0.432 stromal cell derived factor 2-like protein 0.988 0.148 n y n ruditapes_c15367 -? 0.432 0.617 0 n y n ruditapes_c5484 -1.276 0.433 24.833 19.465 n n n ruditapes_c31945 -1.512 0.433 9.183 6.072 n y n ruditapes_c11679 1.799 0.433 2.637 4.743 n y n ruditapes_c13594 -1.597 0.433 7.343 4.597 n y n ruditapes_c22368 -1.721 0.433 5.665 3.292 n y n ruditapes_c31328 2.698 0.433 0.781 2.106 n y n ruditapes_c825 2.885 0.433 0.665 1.919 n y n ruditapes_c16575 6.296 0.433 0.159 1.003 n y n ruditapes_c14371 ? 0.433 inosine monophosphate dehydrogenase 1 /// 0055114 // oxidation reduction /// 0046651 // lymphocyte proliferation /// 0030955 // potassium ion binding /// 0003938 // IMP dehydrogenase activity /// 0007601 // visual perception /// 0050896 // response to stimulus /// 0005829 // cytosol /// 0006177 // GMP biosynthetic process 0 0.616 n y n ruditapes_c4268 ? 0.433 peptidylprolyl isomerase b (cyclophilin b) /// 0005783 // endoplasmic reticulum /// 0051082 // unfolded protein binding /// 0016853 // isomerase activity 0 0.614 n y n ruditapes_c28514 ? 0.433 0 0.613 n y n ruditapes_c12832 -3.336 0.433 1.644 0.493 n y n ruditapes_c1566 -3.614 0.433 1.515 0.419 n y n ruditapes_c24474 -3.841 0.433 1.426 0.371 n y n ruditapes_c816 -4.13 0.433 1.337 0.324 n y n ruditapes_c22940 -5.401 0.433 1.101 0.204 n y n ruditapes_c6965 -? 0.433 0.616 0 n y n ruditapes_c13181 -? 0.433 0.615 0 n y n ruditapes_c6420 -? 0.433 putative pheromone [Aplysia californica] 0.614 0 n y n ruditapes_c7741 -? 0.433 0.614 0 n y n ruditapes_c23524 -1.458 0.434 10.82 7.419 n n n ruditapes_c10086 -1.532 0.434 8.671 5.661 n y n ruditapes_c14508 -1.714 0.434 selenium binding protein 1 /// 0044464 // cell part 5.722 3.338 n y n ruditapes_c7260 -1.731 0.434 rna-binding protein pno1 /// 0005730 // nucleolus 5.554 3.208 n y n ruditapes_c18714 -1.946 0.434 3.998 2.055 n y n ruditapes_c11994 -2.053 0.434 3.52 1.715 n y n ruditapes_c29471 -2.33 0.434 2.726 1.17 n y n ruditapes_lrc34291 -2.611 0.434 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 2.249 0.861 n y n ruditapes_c29913 -2.669 0.434 2.181 0.817 n y n ruditapes_c12329 -2.753 0.434 2.077 0.755 n y n ruditapes_c4626 -2.841 0.434 1.991 0.701 n y n ruditapes2_lrc4441 ? 0.434 PREDICTED: similar to GA20453-PA [Nasonia vitripennis] 0 0.612 n y n ruditapes_c22334 -3.018 0.434 1.84 0.61 n y n ruditapes_c19132 -3.235 0.434 class type member 2 1.693 0.523 n y n ruditapes_c8334 -3.592 0.434 1.514 0.421 n y n ruditapes_c23982 -3.812 0.434 1.434 0.376 n y n ruditapes_lrc26785 -4.003 0.434 1.367 0.341 n y n ruditapes_c28455 -4.448 0.434 1.255 0.282 n y n ruditapes_c28922 -4.448 0.434 pol polyprotein 1.254 0.282 n y n ruditapes2_c7035 -6.671 0.434 0.979 0.147 n y n ruditapes_c28274 -? 0.434 0.612 0 n y n ruditapes_c27581 1.494 0.435 6.021 8.998 n n n ruditapes_c16645 -1.434 0.435 11.709 8.165 n n n ruditapes_c16205 -1.442 0.435 11.416 7.918 n n n ruditapes2_c2710 -1.676 0.435 mitochondrial ribosomal protein l35 6.133 3.659 n y n ruditapes_c21642 -1.69 0.435 5.973 3.534 n y n ruditapes_c19271 2.115 0.435 1.503 3.179 n y n ruditapes_c21461 -1.843 0.435 immunoglobulin member 22 4.586 2.489 n y n ruditapes_c29677 2.473 0.435 protein 0.962 2.379 n y n ruditapes2_c167 -1.92 0.435 sarcoplasmic calcium-binding protein 4.116 2.144 n y n ruditapes_c17556 -2.025 0.435 immunoglobulin member 5 3.622 1.788 n y n ruditapes_c25547 -2.165 0.435 3.125 1.443 n y n ruditapes2_c1281 -2.224 0.435 2.959 1.331 n y n ruditapes_s39403 4.947 0.435 0.231 1.143 n y n ruditapes_c19600 -2.594 0.435 2.265 0.873 n y n ruditapes_lrc15229 -4.448 0.435 1.253 0.282 n y n ruditapes_c16184 -9.636 0.435 0.841 0.087 n y n ruditapes2_lrc4024 -11.119 0.435 0.803 0.072 n y n ruditapes_c18210 -20.014 0.435 0.709 0.035 n y n ruditapes_c11748 -? 0.435 0.609 0 n y n ruditapes_c22174 -? 0.435 0.609 0 n y n ruditapes_c24546 -? 0.435 0.609 0 n y n ruditapes_c29747 -? 0.435 0.609 0 n y n ruditapes_c31858 -? 0.435 0.609 0 n y n ruditapes_c5250 -1.141 0.436 82.587 72.37 n n n ruditapes_c10626 -1.268 0.436 25.705 20.265 n n n ruditapes_c20194 -1.287 0.436 22.851 17.749 n n n ruditapes_c13786 -1.33 0.436 18.166 13.663 n n n ruditapes_c20170 1.643 0.436 3.791 6.227 n y n ruditapes_c25335 -1.564 0.436 7.879 5.037 n y n ruditapes_c19171 2.076 0.436 deleted in lung and esophageal cancer 1 isoform dlec1-n1 1.586 3.294 n y n ruditapes_c6976 -1.738 0.436 5.433 3.126 n y n ruditapes_c5129 -1.836 0.436 slc25a3-prov protein /// 0015317 // phosphate:hydrogen symporter activity /// 0005743 // mitochondrial inner membrane 4.608 2.51 n y n ruditapes_c19502 2.998 0.436 0.601 1.801 n y n ruditapes_c23595 -2.043 0.436 3.534 1.729 n y n ruditapes_c25388 -2.363 0.436 2.634 1.115 n y n ruditapes_c20933 6.296 0.436 0.157 0.99 n y n ruditapes2_c2604 -2.514 0.436 spermatogenesis associated 4 /// 0006915 // apoptosis /// 0007283 // spermatogenesis 2.374 0.944 n y n ruditapes_lrc32848 -2.551 0.436 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 2.315 0.908 n y n ruditapes_c10965 11.242 0.436 perlucin 6 0.071 0.795 n y n ruditapes_lrc7915 ? 0.436 0 0.608 n y n ruditapes_c17380 ? 0.436 leucine rich repeat containing 40 0 0.606 n y n ruditapes2_c2250 -3.032 0.436 sumo sentrin specific peptidase family member 8 1.815 0.598 n y n ruditapes_c29665 -3.065 0.436 1.791 0.584 n y n ruditapes_c12467 -3.401 0.436 1.588 0.467 n y n ruditapes_c24203 -3.639 0.436 1.485 0.408 n y n ruditapes_lrc38666 -4.448 0.436 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 1.245 0.28 n y n ruditapes_c20790 -6.671 0.436 0.971 0.146 n y n ruditapes_lrc38308 -6.671 0.436 0.97 0.145 n y n ruditapes_lrc13983 -? 0.436 0.608 0 n y n ruditapes_c26151 1.581 0.437 4.486 7.094 n y n ruditapes2_c1628 -1.56 0.437 7.932 5.084 n y n ruditapes2_lrc5533 -1.605 0.437 7.089 4.417 n y n ruditapes_c18449 2.083 0.437 1.564 3.257 n y n ruditapes_lrc33338 2.501 0.437 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 0.928 2.322 n y n ruditapes_c7536 3.238 0.437 0.507 1.642 n y n ruditapes_s39320 -2.152 0.437 3.135 1.457 n y n ruditapes_c20079 -2.164 0.437 3.11 1.437 n y n ruditapes2_lrc5254 5.846 0.437 glutathione s-transferase 0.175 1.023 n y n ruditapes_c23582 -2.527 0.437 2.338 0.925 n y n ruditapes_c19196 -2.53 0.437 2.331 0.921 n y n ruditapes_c30949 8.094 0.437 0.109 0.879 n y n ruditapes_c27419 ? 0.437 0 0.605 n y n ruditapes_c26586 ? 0.437 0 0.604 n y n ruditapes_c14215 -4.892 0.437 1.156 0.236 n y n ruditapes_c9326 -5.189 0.437 1.114 0.215 n y n ruditapes_c10061 -16.678 0.437 class member 2 /// 0015923 // mannosidase activity 0.727 0.044 n y n ruditapes_c14171 -? 0.437 0.604 0 n y n ruditapes_c24324 -? 0.437 0.604 0 n y n ruditapes_c26811 -? 0.437 0.604 0 n y n ruditapes_c26681 1.616 0.438 4.047 6.539 n y n ruditapes_lrc10344 -1.547 0.438 8.157 5.274 n y n ruditapes_c12114 -1.618 0.438 6.862 4.24 n y n ruditapes2_lrc4331 -1.689 0.438 metallothionein 5.906 3.496 n y n ruditapes2_c1166 -1.715 0.438 5.604 3.268 n y n ruditapes_c14101 -1.822 0.438 4.672 2.565 n y n ruditapes_c29390 -1.984 0.438 3.745 1.887 n y n ruditapes_c1652 16.638 0.438 0.043 0.72 n y n ruditapes2_c3476 -2.926 0.438 mitochondrial 50s ribosomal protein 1.884 0.644 n y n ruditapes2_c1821 ? 0.438 predicted protein [Nematostella vectensis] 0 0.602 n y n ruditapes_lrc32590 -4.448 0.438 gm2 activator protein 1.235 0.278 n y n ruditapes_c18609 -5.189 0.438 1.107 0.213 n y n ruditapes_c25282 -5.189 0.438 1.107 0.213 n y n ruditapes_s39995 -? 0.438 0.603 0 n y n ruditapes_c16372 -? 0.438 0.602 0 n y n ruditapes_c13259 -1.307 0.439 20.179 15.44 n n n ruditapes_c22751 -1.335 0.439 17.425 13.048 n n n ruditapes_c9029 1.408 0.439 8.352 11.756 n n n ruditapes2_c1505 -1.376 0.439 14.414 10.475 n n n ruditapes2_c965 -1.516 0.439 8.875 5.855 n y n ruditapes_c16669 -1.573 0.439 7.618 4.843 n y n ruditapes2_c1222 -1.762 0.439 nuclear dna-binding protein /// 0003714 // transcription corepressor activity /// 0016922 // ligand-dependent nuclear receptor binding /// 0017053 // transcriptional repressor complex /// 0016481 // negative regulation of transcription /// 0003677 // DNA binding /// 0016070 // RNA metabolic process 5.142 2.919 n y n ruditapes_c29776 2.248 0.439 1.227 2.759 n y n ruditapes2_c953 5.621 0.439 0.185 1.039 n y n ruditapes_c9575 -2.621 0.439 2.186 0.834 n y n ruditapes_c10699 -2.628 0.439 coiled-coil domain-containing 2.182 0.83 n y n ruditapes_c11821 10.343 0.439 0.077 0.801 n y n ruditapes_c9501 -2.75 0.439 phosphoserine aminotransferase 1 /// 0030170 // pyridoxal phosphate binding /// 0006564 // L-serine biosynthetic process /// 0004648 // O-phospho-L-serine:2-oxoglutarate aminotransferase activity /// 0008615 // pyridoxine biosynthetic process 2.044 0.743 n y n ruditapes2_c1401 -3.177 0.439 1.693 0.533 n y n ruditapes_c31033 -3.855 0.439 endonuclease reverse transcriptase 1.387 0.36 n y n ruditapes_c28637 -4.17 0.439 1.296 0.311 n y n ruditapes2_lrc4867 -4.2 0.439 nadh dehydrogenase 1 beta 8kda 1.283 0.306 n y n ruditapes_c29101 -4.448 0.439 1.23 0.277 n y n ruditapes_c7629 -4.448 0.439 1.229 0.276 n y n ruditapes_c26976 -5.559 0.439 1.056 0.19 n y n ruditapes_s35780 -20.014 0.439 ubiquinol-cytochrome c reductase hinge protein /// 0009060 // aerobic respiration /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain /// 0008121 // ubiquinol-cytochrome-c reductase activity 0.699 0.035 n y n ruditapes_c20908 -? 0.439 0.599 0 n y n ruditapes_c20157 -? 0.439 0.598 0 n y n ruditapes_c3416 -1.308 0.44 19.937 15.244 n n n ruditapes_c25430 -1.408 0.44 12.639 8.977 n n n ruditapes_c31459 1.52 0.44 5.369 8.163 n y n ruditapes2_c3290 1.543 0.44 5 7.715 n y n ruditapes_c1117 -1.454 0.44 ccaat enhancer binding protein "/// 0016563 // transcription activator activity /// 0045408 // regulation of interleukin-6 biosynthetic process /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0045444 // fat cell differentiation /// 0043565 // sequence-specific DNA binding /// 0006916 // anti-apoptosis /// 0046982 // protein heterodimerization activity /// 0016363 // nuclear matrix /// 0006917 // induction of apoptosis /// 0003705 // RNA polymerase II transcription factor activity, enhancer binding /// 0005737 // cytoplasm /// 0030182 // neuron differentiation /// 0042803 // protein homodimerization activity" 10.687 7.35 n n n ruditapes_c24622 -1.476 0.44 9.931 6.728 n n n ruditapes2_c2467 -1.483 0.44 9.747 6.574 n n n ruditapes_c9024 -1.572 0.44 7.588 4.826 n y n ruditapes2_c3967 -1.586 0.44 hepatopancreas kazal-type proteinase inhibitor 7.335 4.625 n y n ruditapes_c26517 -1.588 0.44 ribosomal rna processing 12 homolog ( cerevisiae) 7.288 4.588 n y n ruditapes_c28546 -1.702 0.44 5.699 3.348 n y n ruditapes2_c2327 -1.733 0.44 5.37 3.098 n y n ruditapes_c19879 -1.744 0.44 5.271 3.023 n y n ruditapes_c24310 -1.83 0.44 4.57 2.497 n y n ruditapes2_c2128 -1.966 0.44 3.798 1.932 n y n ruditapes_lrc14650 -1.977 0.44 3.753 1.899 n y n ruditapes_c37219 3.013 0.44 0.584 1.759 n y n ruditapes_c10159 -2.03 0.44 3.525 1.736 n y n ruditapes_c10115 -2.347 0.44 serine protease inhibitor 2 2.621 1.117 n y n ruditapes2_c300 -2.684 0.44 2.104 0.784 n y n ruditapes_c19603 ? 0.44 0 0.596 n y n ruditapes_c3201 ? 0.44 0 0.596 n y n ruditapes_c29340 -3.653 0.44 1.451 0.397 n y n ruditapes_c18103 -3.78 0.44 histidine acid phosphatase domain containing 1 "/// 0000827 // inositol 1, 3, 4, 5, 6-pentakisphosphate kinase activity /// 0000832 // inositol hexakisphosphate 5-kinase activity /// 0005829 // cytosol /// 0033857 // diphosphoinositol-pentakisphosphate kinase activity /// 0006020 // inositol metabolic process" 1.402 0.371 n y n ruditapes_c9942 -4.65 0.44 1.181 0.254 n y n ruditapes_lrc34009 -4.765 0.44 ubiquinol-cytochrome c complex iii subunit vii 1.164 0.244 n y n ruditapes_lrc30430 -5.782 0.44 1.028 0.178 n y n ruditapes_c23344 -6.671 0.44 hypothetical protein AaeL_AAEL011034 [Aedes aegypti] 0.955 0.143 n y n ruditapes_c20685 -? 0.44 0.597 0 n y n ruditapes_lrc32839 -? 0.44 0.597 0 n y n ruditapes_c11128 -1.383 0.441 13.923 10.069 n n n ruditapes_c25197 -1.405 0.441 12.725 9.056 n n n ruditapes_c9894 -1.443 0.441 11.066 7.669 n n n ruditapes_c18388 1.58 0.441 4.438 7.011 n y n ruditapes_lrc9469 -1.552 0.441 7.927 5.106 n y n ruditapes_c51 -1.562 0.441 vacuolar atp synthase subunit h 7.735 4.95 n y n ruditapes_c1235 -1.605 0.441 6.991 4.356 n y n ruditapes2_c816 -1.7 0.441 thioester-containing protein 5.699 3.353 n y n ruditapes_c9036 -1.791 0.441 4.857 2.711 n y n ruditapes_c13335 -1.901 0.441 4.123 2.169 n y n ruditapes2_lrc5506 5.396 0.441 0.196 1.056 n y n ruditapes_c21129 -2.426 0.441 "PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]" 2.454 1.012 n y n ruditapes_c10495 7.645 0.441 0.116 0.886 n y n ruditapes_s36167 -2.83 0.441 1.938 0.685 n y n ruditapes_c5110 -2.891 0.441 pol-like protein 1.888 0.653 n y n ruditapes_c7781 -3.002 0.441 1.798 0.599 n y n ruditapes_c21446 -3.043 0.441 1.765 0.58 n y n ruditapes_c15202 -3.953 0.441 1.343 0.34 n y n ruditapes_lrc38523 -5.782 0.441 1.024 0.177 n y n ruditapes_c10817 -7.227 0.441 0.915 0.127 n y n ruditapes_c9287 -11.86 0.441 0.768 0.065 n y n ruditapes_c9599 -? 0.441 0.593 0 n y n ruditapes2_c1365 -1.311 0.442 19.455 14.841 n n n ruditapes_c10242 -1.32 0.442 18.554 14.052 n n n ruditapes_lrc34082 -1.466 0.442 tyb_aplca ame: full=thymosin beta ame: full=beta-thymosin 10.197 6.958 n n n ruditapes_c9792 -1.711 0.442 5.57 3.256 n y n ruditapes_c6671 -1.716 0.442 5.495 3.202 n y n ruditapes_c20753 -2.224 0.442 glutathione peroxidase 2 /// 0009609 // response to symbiotic bacterium /// 0051702 // interaction with symbiont /// 0002862 // negative regulation of inflammatory response to antigenic stimulus /// 0005829 // cytosol /// 0001659 // temperature homeostasis /// 0009055 // electron carrier activity /// 0004602 // glutathione peroxidase activity 2.876 1.293 n y n ruditapes_c14436 -2.491 0.442 vitelline membrane outer layer 1 homolog 2.345 0.941 n y n ruditapes2_c3946 -2.692 0.442 2.08 0.773 n y n ruditapes_c25174 ? 0.442 0 0.592 n y n ruditapes_c26419 ? 0.442 0 0.592 n y n ruditapes_c29213 ? 0.442 0 0.592 n y n ruditapes_c28905 -3.113 0.442 1.71 0.549 n y n ruditapes2_c2404 -3.139 0.442 1.692 0.539 n y n ruditapes_c16473 -3.475 0.442 1.512 0.435 n y n ruditapes_c13388 -6.671 0.442 0.945 0.142 n y n ruditapes2_c2297 -14.454 0.442 defender against cell death 1 /// 0044425 // membrane part /// 0042221 // response to chemical stimulus /// 0006915 // apoptosis /// 0005783 // endoplasmic reticulum 0.73 0.05 n y n ruditapes_c5979 -? 0.442 0.59 0 n y n ruditapes_c27881 -1.262 0.443 26.004 20.611 n n n ruditapes_c27998 1.53 0.443 5.151 7.88 n y n ruditapes_lrc32115 1.622 0.443 histone h2a /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 3.894 6.315 n y n ruditapes_c10769 -1.55 0.443 7.926 5.113 n y n ruditapes_c10269 -1.574 0.443 methyl- binding protein mbd2 /// 0008327 // methyl-CpG binding /// 0019904 // protein domain specific binding /// 0016481 // negative regulation of transcription /// 0005634 // nucleus /// 0003696 // satellite DNA binding /// 0016564 // transcription repressor activity 7.458 4.739 n y n ruditapes_c11356 2.012 0.443 1.699 3.417 n y n ruditapes_c31123 -1.789 0.443 4.826 2.698 n y n ruditapes_c30340 -1.848 0.443 4.394 2.378 n y n ruditapes_c11299 -1.971 0.443 eukaryotic translation initiation factor subunit 3 gamma /// 0009058 // biosynthetic process /// 0009987 // cellular process 3.725 1.89 n y n ruditapes2_c2836 -2.001 0.443 3.595 1.796 n y n ruditapes2_c1478 3.429 0.443 transforming growth beta induced /// 0005488 // binding /// 0044421 // extracellular region part 0.439 1.505 n y n ruditapes_c8958 3.485 0.443 0.424 1.477 n y n ruditapes_c27403 -2.452 0.443 2.39 0.975 n y n ruditapes_c31133 -2.641 0.443 2.131 0.807 n y n ruditapes_lrc38799 13.041 0.443 transport protein sec61 subunit beta "/// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation /// 0008565 // protein transporter activity /// 0005784 // translocon complex" 0.057 0.741 n y n ruditapes_c31437 ? 0.443 0 0.589 n y n ruditapes_c9804 ? 0.443 hemagglutinin amebocyte aggregation factor precursor 0 0.589 n y n ruditapes_lrc32078 ? 0.443 0 0.588 n y n ruditapes_c22688 ? 0.443 0 0.587 n y n ruditapes_c14563 -3.78 0.443 1.384 0.366 n y n ruditapes_c22137 -4.13 0.443 1.282 0.31 n y n ruditapes_c25241 -8.154 0.443 0.863 0.106 n y n ruditapes_c31573 -17.79 0.443 0.699 0.039 n y n ruditapes_s39541 -20.014 0.443 0.686 0.034 n y n ruditapes_c14603 -? 0.443 proline-rich transmembrane protein 2 0.588 0 n y n ruditapes2_c2898 -1.192 0.444 44.734 37.513 n n n ruditapes2_c487 -1.206 0.444 39.59 32.838 n n n ruditapes2_lrc3661 -1.23 0.444 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 32.371 26.313 n n n ruditapes2_c2953 -1.427 0.444 11.534 8.083 n n n ruditapes_c4381 -1.523 0.444 8.522 5.597 n y n ruditapes_c26947 -1.681 0.444 exocyst complex component 4 /// 0006903 // vesicle targeting /// 0006612 // protein targeting to membrane /// 0014069 // postsynaptic density /// 0043025 // cell soma /// 0043198 // dendritic shaft /// 0005737 // cytoplasm /// 0051223 // regulation of protein transport /// 0030165 // PDZ domain binding /// 0030426 // growth cone 5.85 3.481 n y n ruditapes_c10836 -1.753 0.444 5.105 2.912 n y n ruditapes_c28921 -1.766 0.444 4.99 2.826 n y n ruditapes_c29102 -1.798 0.444 4.739 2.636 n y n ruditapes2_c2864 -1.891 0.444 quaking protein /// 0044238 // primary metabolic process /// 0030154 // cell differentiation /// 0005515 // protein binding /// 0044249 // cellular biosynthetic process /// 0008366 // axon ensheathment 4.113 2.174 n y n ruditapes_c5025 -2.224 0.444 2.853 1.283 n y n ruditapes_c23200 8.544 0.444 0.098 0.838 n y n ruditapes_lrc36661 -3.25 0.444 1.612 0.496 n y n ruditapes_c27762 -3.336 0.444 1.57 0.471 n y n ruditapes_c9070 -3.841 0.444 1.359 0.354 n y n ruditapes_c19212 -? 0.444 0.585 0 n y n ruditapes2_c1695 -1.551 0.445 dopamine beta hydroxylase-like protein 7.842 5.057 n y n ruditapes_c6570 -1.846 0.445 4.366 2.366 n y n ruditapes_c1392 -1.892 0.445 component of the counting factor complex 4.097 2.165 n y n ruditapes_c18910 3.223 0.445 chromodomain helicase dna binding protein 5 /// 0005488 // binding /// 0009987 // cellular process 0.495 1.595 n y n ruditapes_c7659 -2.097 0.445 sulfotransferase family cytosolic sulfotransferase 3 /// 0006950 // response to stress /// 0018960 // 4-nitrophenol metabolic process /// 0017144 // drug metabolic process /// 0051384 // response to glucocorticoid stimulus /// 0008210 // estrogen metabolic process /// 0005829 // cytosol /// 0008217 // regulation of blood pressure /// 0006584 // catecholamine metabolic process /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding /// 0004062 // aryl sulfotransferase activity /// 0051923 // sulfation /// 0042803 // protein homodimerization activity 3.204 1.528 n y n ruditapes_c18993 -2.224 0.445 2.835 1.275 n y n ruditapes_c19898 -2.527 0.445 2.261 0.895 n y n ruditapes_c6144 -2.687 0.445 2.056 0.765 n y n ruditapes_c8698 12.591 0.445 l1 cell adhesion molecule /// 0044425 // membrane part /// 0046649 // lymphocyte activation /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0048522 // positive regulation of cellular process /// 0031175 // neuron projection development /// 0042995 // cell projection /// 0009986 // cell surface /// 0006928 // cell motion /// 0007165 // signal transduction /// 0007159 // leukocyte adhesion 0.059 0.742 n y n ruditapes_c18041 -2.809 0.445 1.926 0.686 n y n ruditapes_c17863 ? 0.445 0 0.585 n y n ruditapes_c11185 ? 0.445 0 0.584 n y n ruditapes_c28219 ? 0.445 0 0.584 n y n ruditapes_c6524 ? 0.445 0 0.584 n y n ruditapes_c13667 -3.177 0.445 1.651 0.52 n y n ruditapes_c24561 -3.812 0.445 1.366 0.358 n y n ruditapes_c6539 -5.054 0.445 xotch protein - african clawed frog 1.091 0.216 n y n ruditapes2_lrc6051 -11.119 0.445 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.77 0.069 n y n ruditapes_lrc33656 -11.119 0.445 ubiquinol-cytochrome c complex iii subunit vii 0.769 0.069 n y n ruditapes_c2589 -1.123 0.446 102.45 91.196 n n n ruditapes2_c1485 1.384 0.446 9.033 12.503 n n n ruditapes2_c564 1.475 0.446 6.176 9.108 n n n ruditapes_c24941 -1.401 0.446 12.646 9.025 n n n ruditapes_c3050 1.549 0.446 4.777 7.4 n y n ruditapes2_c676 -1.459 0.446 10.26 7.032 n n n ruditapes_c11276 -1.479 0.446 9.624 6.508 n n n ruditapes2_c853 -1.491 0.446 9.239 6.197 n n n ruditapes_c11387 -1.602 0.446 6.874 4.291 n y n ruditapes_c16951 1.954 0.446 1.85 3.616 n y n ruditapes2_c3474 1.969 0.446 translocase of outer mitochondrial membrane 7 homolog 1.8 3.544 n y n ruditapes_c21194 -1.674 0.446 "PREDICTED: hypothetical protein, partial [Homo sapiens]" 5.874 3.51 n y n ruditapes_c8287 -1.739 0.446 5.18 2.979 n y n ruditapes_c27197 -1.76 0.446 4.991 2.835 n y n ruditapes_c36565 -1.841 0.446 type alpha 1 /// 0005198 // structural molecule activity /// 0005578 // proteinaceous extracellular matrix 4.381 2.38 n y n ruditapes_c31688 2.698 0.446 0.738 1.99 n y n ruditapes_c17478 4.137 0.446 0.301 1.245 n y n ruditapes_c26411 -2.313 0.446 2.624 1.135 n y n ruditapes_c2088 -2.482 0.446 2.316 0.933 n y n ruditapes_c26972 ? 0.446 0 0.582 n y n ruditapes2_c3969 ? 0.446 PREDICTED: similar to Kielin [Ciona intestinalis] 0 0.581 n y n ruditapes_c27704 ? 0.446 0 0.581 n y n ruditapes_c11614 -7.042 0.446 0.903 0.128 n y n ruditapes_c24688 -? 0.446 0.581 0 n y n ruditapes_c29370 -1.205 0.447 39.408 32.707 n n n ruditapes_lrc37660 -1.396 0.447 nucleoside diphosphate kinase /// 0005488 // binding /// 0009117 // nucleotide metabolic process 12.8 9.166 n n n ruditapes2_c1042 -1.404 0.447 proline-rich transmembrane protein 1 12.419 8.844 n n n ruditapes2_c2106 -1.617 0.447 6.612 4.088 n y n ruditapes_c17001 -1.668 0.447 5.912 3.545 n y n ruditapes_c16050 -1.678 0.447 5.789 3.449 n y n ruditapes_c21145 2.453 0.447 0.933 2.289 n y n ruditapes2_c2649 -2.029 0.447 3.422 1.687 n y n ruditapes_c21418 -2.377 0.447 cd68 molecule 2.487 1.046 n y n ruditapes_c18480 ? 0.447 0 0.578 n y n ruditapes_s39060 -3.113 0.447 DEC-3 [Lymnaea stagnalis] 1.678 0.539 n y n ruditapes_c3879 -5.189 0.447 cdgsh iron sulfur domain 2 /// 0043231 // intracellular membrane-bounded organelle /// 0005488 // binding /// 0016020 // membrane /// 0043234 // protein complex 1.065 0.205 n y n ruditapes_c28721 -5.281 0.447 1.05 0.199 n y n ruditapes_c3987 -8.895 0.447 0.82 0.092 n y n ruditapes_lrc21999 -15.566 0.447 0.705 0.045 n y n ruditapes_c24295 -15.566 0.447 0.703 0.045 n y n ruditapes_lrc11645 -? 0.447 0.578 0 n y n ruditapes_c17128 -1.298 0.448 20.351 15.678 n n n ruditapes_c10045 1.341 0.448 11.104 14.888 n n n ruditapes2_c2828 -1.354 0.448 15.261 11.269 n n n ruditapes_c12284 -1.38 0.448 13.625 9.871 n n n ruditapes_c18094 -1.4 0.448 12.571 8.981 n n n ruditapes2_c569 -1.41 0.448 12.117 8.596 n n n ruditapes2_c5848 1.492 0.448 adhesion regulating molecule 1 5.721 8.538 n n n ruditapes_c717 -1.425 0.448 11.435 8.027 n n n ruditapes_c10582 1.553 0.448 4.668 7.251 n y n ruditapes_c9397 -1.588 0.448 7.05 4.438 n y n ruditapes2_lrc4114 -1.675 0.448 glutathione s-transferase protein confirmed by transcript evidence 5.794 3.458 n y n ruditapes_c16235 2.041 0.448 1.585 3.235 n y n ruditapes_c22880 -1.722 0.448 translocase of inner mitochondrial membrane 17 homolog b /// 0006626 // protein targeting to mitochondrion /// 0016021 // integral to membrane /// 0008565 // protein transporter activity /// 0005744 // mitochondrial inner membrane presequence translocase complex 5.297 3.077 n y n ruditapes_c25101 -1.807 0.448 radial spoke 3 homolog 4.574 2.531 n y n ruditapes_c266 -1.809 0.448 aldehyde dehydrogenase (nad+) /// 0005829 // cytosol /// 0042574 // retinal metabolic process /// 0004028 // 3-chloroallyl aldehyde dehydrogenase activity 4.575 2.53 n y n ruditapes_c2073 -1.863 0.448 4.216 2.263 n y n ruditapes_c15267 2.473 0.448 0.91 2.252 n y n ruditapes_s40414 2.811 0.448 ribosomal protein p1 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 0.663 1.862 n y n ruditapes_lrc20900 2.923 0.448 0.604 1.765 n y n ruditapes_c28209 -2.318 0.448 2.581 1.113 n y n ruditapes_lrc21695 -2.68 0.448 2.032 0.758 n y n ruditapes_c18011 -2.78 0.448 1.933 0.695 n y n ruditapes_c31627 ? 0.448 0 0.577 n y n ruditapes_c20926 ? 0.448 0 0.575 n y n ruditapes_c18324 -3.058 0.448 1.704 0.557 n y n ruditapes_c31501 -3.262 0.448 1.577 0.484 n y n ruditapes_c21436 -3.953 0.448 1.3 0.329 n y n ruditapes_c7788 -4.105 0.448 1.263 0.308 n y n ruditapes_c23303 -4.633 0.448 1.147 0.248 n y n ruditapes_c27711 -11.119 0.448 0.761 0.068 n y n ruditapes_lrc32445 -24.461 0.448 sarcoplasmic calcium-binding protein 0.653 0.027 n y n ruditapes_c31804 -? 0.448 0.575 0 n y n ruditapes_c17379 -1.271 0.449 23.84 18.761 n n n ruditapes2_c1202 -1.33 0.449 17.111 12.863 n n n ruditapes_c12570 1.621 0.449 3.796 6.152 n y n ruditapes_c8285 1.92 0.449 1.944 3.732 n y n ruditapes_lrc23483 -1.706 0.449 5.451 3.195 n y n ruditapes_c24603 -1.859 0.449 4.211 2.266 n y n ruditapes_c2141 -1.929 0.449 3.826 1.984 n y n ruditapes_c2646 3.26 0.449 actin-related protein 2 3 complex subunit 3 /// 0005856 // cytoskeleton /// 0030833 // regulation of actin filament polymerization 0.473 1.544 n y n ruditapes_c70 -2.201 0.449 2.851 1.295 n y n ruditapes2_c3177 5.059 0.449 0.21 1.06 n y n ruditapes_c27329 7.87 0.449 0.107 0.843 n y n ruditapes_c22017 9.443 0.449 serine long chain base subunit 2 "/// 0044425 // membrane part /// 0030170 // pyridoxal phosphate binding /// 0009058 // biosynthetic process /// 0016769 // transferase activity, transferring nitrogenous groups /// 0005783 // endoplasmic reticulum /// 0004758 // serine C-palmitoyltransferase activity" 0.084 0.791 n y n ruditapes_c31413 -2.859 0.449 1.851 0.647 n y n ruditapes2_lrc4779 -4.003 0.449 1.284 0.321 n y n ruditapes_c20937 -5.782 0.449 0.989 0.171 n y n ruditapes_c28788 -8.339 0.449 matrilin 3 0.831 0.1 n y n ruditapes_c22811 -11.119 0.449 0.755 0.068 n y n ruditapes_lrc15303 -? 0.449 0.573 0 n y n ruditapes_c18550 -1.187 0.45 45.909 38.678 n n n ruditapes_lrc13329 -1.251 0.45 27.154 21.705 n n n ruditapes_c12734 -1.258 0.45 25.838 20.539 n n n ruditapes2_lrc5136 1.861 0.45 metallothionein /// 0046872 // metal ion binding 2.16 4.018 n y n ruditapes_c20086 2.248 0.45 fch domain only 1 1.17 2.63 n y n ruditapes2_c2213 -1.885 0.45 4.042 2.144 n y n ruditapes_c26050 2.616 0.45 0.78 2.04 n y n ruditapes_c31542 -2.224 0.45 2.772 1.247 n y n ruditapes_c27498 6.446 0.45 0.142 0.918 n y n ruditapes_c1355 -2.529 0.45 glutathione peroxidase 3 /// 0006749 // glutathione metabolic process /// 0005625 // soluble fraction /// 0005615 // extracellular space /// 0042744 // hydrogen peroxide catabolic process /// 0008430 // selenium binding /// 0004602 // glutathione peroxidase activity /// 0051289 // protein homotetramerization /// 0043295 // glutathione binding 2.209 0.873 n y n ruditapes_c19515 ? 0.45 0 0.57 n y n ruditapes_c23612 -3.212 0.45 1.593 0.496 n y n ruditapes_s35965 -3.639 0.45 1.397 0.384 n y n ruditapes_c23507 -4.13 0.45 1.243 0.301 n y n ruditapes_lrc37534 -4.892 0.45 1.094 0.224 n y n ruditapes2_c149 -1.455 0.451 stress-associated endoplasmic reticulum protein 1 /// 0046622 // positive regulation of organ growth /// 0010259 // multicellular organismal aging /// 0005789 // endoplasmic reticulum membrane /// 0006006 // glucose metabolic process /// 0045727 // positive regulation of translation /// 0048644 // muscle organ morphogenesis /// 0032024 // positive regulation of insulin secretion /// 0001501 // skeletal system development /// 0016021 // integral to membrane /// 0009791 // post-embryonic development /// 0030968 // endoplasmic reticulum unfolded protein response /// 0060124 // positive regulation of growth hormone secretion /// 0065002 // intracellular protein transmembrane transport 10.175 6.995 n n n ruditapes_c31617 -1.609 0.451 6.593 4.096 n y n ruditapes2_c988 2.158 0.451 1.319 2.847 n y n ruditapes_c21067 -1.906 0.451 alternative oxidase 3.917 2.055 n y n ruditapes_lrc35626 -1.906 0.451 nadh: oxidoreductase subunit /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane 3.906 2.049 n y n ruditapes_c16846 3.058 0.451 0.539 1.647 n y n ruditapes_c649 -2.224 0.451 predicted protein [Nematostella vectensis] 2.765 1.243 n y n ruditapes_c23789 -2.363 0.451 2.47 1.045 n y n ruditapes2_lrc4209 10.792 0.451 0.07 0.753 n y n ruditapes2_lrc3791 -3.002 0.451 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 1.72 0.573 n y n ruditapes2_c3227 ? 0.451 vdg3 [Mytilus edulis] 0 0.569 n y n ruditapes_c21411 ? 0.451 0 0.569 n y n ruditapes_c23422 -3.336 0.451 1.519 0.455 n y n ruditapes_c10714 -3.521 0.451 fibropellin partial 1.434 0.407 n y n ruditapes_c27207 -? 0.451 0.568 0 n y n ruditapes_c26111 -? 0.451 0.567 0 n y n ruditapes_c18844 -1.172 0.452 53.211 45.414 n n n ruditapes2_c1818 1.347 0.452 10.561 14.221 n n n ruditapes_c27400 -1.432 0.452 10.942 7.639 n n n ruditapes2_c3380 -1.463 0.452 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 9.868 6.747 n n n ruditapes_c24452 -1.566 0.452 7.309 4.666 n y n ruditapes_lrc22946 -1.707 0.452 5.351 3.136 n y n ruditapes2_c27 2.333 0.452 1.045 2.438 n y n ruditapes_c20252 -1.86 0.452 4.161 2.237 n y n ruditapes2_c1447 -2.001 0.452 3.457 1.727 n y n ruditapes_c23574 -2.048 0.452 3.274 1.598 n y n ruditapes_c4821 -2.224 0.452 2.752 1.237 n y n ruditapes_lrc36930 -2.541 0.452 kl-2 1-beta dynein heavy chain 2.167 0.853 n y n ruditapes2_c4989 7.645 0.452 0.111 0.845 n y n ruditapes_c21033 -2.859 0.452 1.826 0.639 n y n ruditapes_lrc13321 -2.931 0.452 1.763 0.601 n y n ruditapes_c4857 -3.25 0.452 1.56 0.48 n y n ruditapes_c7996 -3.421 0.452 1.472 0.43 n y n ruditapes_c19746 -3.639 0.452 1.381 0.379 n y n ruditapes_lrc19961 -3.953 0.452 1.281 0.324 n y n ruditapes_c28181 -4.892 0.452 1.084 0.222 n y n ruditapes_c30018 -9.636 0.452 0.78 0.081 n y n ruditapes_c30088 -? 0.452 0.566 0 n y n ruditapes_c13297 -? 0.452 0.565 0 n y n ruditapes_c7843 -? 0.452 0.565 0 n y n ruditapes_c11939 1.36 0.453 9.814 13.352 n n n ruditapes_c28108 -1.409 0.453 11.86 8.415 n n n ruditapes_c599 -1.446 0.453 10.38 7.178 n n n ruditapes_c12088 -1.545 0.453 7.67 4.964 n y n ruditapes_c21159 -1.57 0.453 7.21 4.593 n y n ruditapes_lrc34340 1.9 0.453 glutathione s-transferase protein confirmed by transcript evidence /// 0005515 // protein binding 1.977 3.756 n y n ruditapes_c12773 2.069 0.453 1.489 3.081 n y n ruditapes_c17582 2.661 0.453 hemicentin 1 /// 0009987 // cellular process 0.74 1.969 n y n ruditapes_c22382 3.223 0.453 0.476 1.535 n y n ruditapes_c9142 3.508 0.453 dumpy cg33196- partial 0.399 1.401 n y n ruditapes_c21885 -2.3 0.453 2.562 1.114 n y n ruditapes_c13937 -2.48 0.453 2.247 0.906 n y n ruditapes_c31158 9.893 0.453 0.077 0.765 n y n ruditapes_c13413 11.242 0.453 0.066 0.737 n y n ruditapes_c31225 ? 0.453 0 0.564 n y n ruditapes2_c107 -3.197 0.453 1.581 0.495 n y n ruditapes_s39247 -4.448 0.453 1.157 0.26 n y n ruditapes2_c1971 -4.818 0.453 1.089 0.226 n y n ruditapes2_c1594 -5.93 0.453 0.957 0.161 n y n ruditapes_c24751 -6.115 0.453 0.942 0.154 n y n ruditapes_c16840 -8.895 0.453 0.797 0.09 n y n ruditapes_c15657 -? 0.453 0.562 0 n y n ruditapes_lrc24985 -1.172 0.454 52.787 45.049 n n n ruditapes2_c118 -1.431 0.454 10.88 7.602 n n n ruditapes_c36544 -1.458 0.454 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 9.922 6.807 n n n ruditapes2_c2365 -1.57 0.454 7.166 4.565 n y n ruditapes_lrc34568 1.949 0.454 kda midgut partial 1.802 3.511 n y n ruditapes_c8811 -1.663 0.454 5.801 3.488 n y n ruditapes2_c541 -1.665 0.454 5.777 3.47 n y n ruditapes_lrc18347 -1.679 0.454 5.609 3.34 n y n ruditapes_c16196 -1.773 0.454 4.724 2.664 n y n ruditapes_c24126 -1.813 0.454 4.419 2.437 n y n ruditapes_c21681 -1.951 0.454 3.64 1.865 n y n ruditapes_c15533 -2.069 0.454 3.176 1.535 n y n ruditapes_c10810 -2.3 0.454 2.557 1.111 n y n ruditapes_s40032 9.893 0.454 40s ribosomal protein s9 /// 0005488 // binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0005829 // cytosol 0.077 0.762 n y n ruditapes_c25066 -2.809 0.454 1.856 0.661 n y n ruditapes2_c5646 -2.841 0.454 1.822 0.641 n y n ruditapes_c14644 ? 0.454 0 0.561 n y n ruditapes_c21958 ? 0.454 sulfotransferase member 2 0 0.561 n y n ruditapes_c22549 -3.177 0.454 1.588 0.5 n y n ruditapes2_c2793 -3.494 0.454 1.43 0.409 n y n ruditapes2_c3071 -3.532 0.454 1.415 0.401 n y n ruditapes_c17988 -3.953 0.454 1.27 0.321 n y n ruditapes_c24552 -4.448 0.454 1.15 0.259 n y n ruditapes_c14021 -8.154 0.454 0.821 0.101 n y n ruditapes_lrc37329 -10.007 0.454 atp synthase f chain 0.764 0.076 n y n ruditapes_c14736 -15.566 0.454 0.681 0.044 n y n ruditapes_c3921 -1.329 0.455 16.72 12.58 n n n ruditapes2_c2140 -1.517 0.455 8.222 5.419 n y n ruditapes2_c686 -1.581 0.455 6.941 4.389 n y n ruditapes_c16356 -1.745 0.455 casein kinase "/// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0000166 // nucleotide binding /// 0004674 // protein serine/threonine kinase activity /// 0006281 // DNA repair /// 0006911 // phagocytosis, engulfment /// 0030163 // protein catabolic process /// 0005737 // cytoplasm /// 0045879 // negative regulation of smoothened signaling pathway /// 0030162 // regulation of proteolysis /// 0030111 // regulation of Wnt receptor signaling pathway" 4.929 2.826 n y n ruditapes_c22738 2.748 0.455 0.675 1.856 n y n ruditapes_c16146 -2.047 0.455 3.233 1.579 n y n ruditapes_c25186 -2.069 0.455 3.15 1.523 n y n ruditapes_c30121 -2.074 0.455 3.139 1.514 n y n ruditapes_c23017 -2.147 0.455 2.918 1.359 n y n ruditapes_c10092 -2.224 0.455 2.711 1.219 n y n ruditapes2_lrc4928 4.722 0.455 0.23 1.084 n y n ruditapes_c1710 -2.616 0.455 vitelline membrane outer layer 1 homolog 2.048 0.783 n y n ruditapes2_lrc6414 11.242 0.455 0.065 0.732 n y n ruditapes_c18570 14.84 0.455 0.046 0.683 n y n ruditapes2_c3837 17.987 0.455 domain containing protein 0.037 0.661 n y n ruditapes_c30958 -2.859 0.455 urease accessory protein ureg /// 0005524 // ATP binding /// 0005739 // mitochondrion /// 0019627 // urea metabolic process /// 0005634 // nucleus /// 0016020 // membrane /// 0005829 // cytosol /// 0016151 // nickel ion binding 1.802 0.63 n y n ruditapes_c18725 ? 0.455 0 0.559 n y n ruditapes_c28027 -4.077 0.455 1.226 0.301 n y n ruditapes_c22792 -6.671 0.455 0.893 0.134 n y n ruditapes_c22314 -? 0.455 graal protein /// 0005488 // binding /// 0006508 // proteolysis /// 0016020 // membrane /// 0007616 // long-term memory /// 0004252 // serine-type endopeptidase activity 0.559 0 n y n ruditapes_c1430 -1.361 0.456 14.326 10.526 n n n ruditapes_c28736 -1.483 0.456 9.072 6.119 n n n ruditapes_c24733 -1.511 0.456 8.32 5.505 n y n ruditapes2_c1431 -1.582 0.456 6.905 4.364 n y n ruditapes_c22399 -1.828 0.456 4.287 2.345 n y n ruditapes_c21045 2.648 0.456 0.736 1.949 n y n ruditapes_c8549 -2.048 0.456 3.219 1.572 n y n ruditapes_c19738 -2.298 0.456 2.54 1.105 n y n ruditapes_c27137 -2.313 0.456 2.512 1.086 n y n ruditapes2_c5276 4.722 0.456 sarcoplasmic calcium-binding protein 0.228 1.076 n y n ruditapes_c337 -2.551 0.456 2.119 0.831 n y n ruditapes_c16598 ? 0.456 0 0.556 n y n ruditapes_c30805 ? 0.456 0 0.556 n y n ruditapes2_c1540 ? 0.456 0 0.555 n y n ruditapes_c22714 ? 0.456 0 0.555 n y n ruditapes_c16215 -3.079 0.456 1.628 0.529 n y n ruditapes_s35308 -3.336 0.456 1.485 0.445 n y n ruditapes_lrc34028 -4.17 0.456 1.198 0.287 n y n ruditapes_lrc21725 -4.942 0.456 1.058 0.214 n y n ruditapes_c23153 -10.007 0.456 0.755 0.075 n y n ruditapes_c28310 -24.461 0.456 0.631 0.026 n y n ruditapes_c31682 -? 0.456 0.556 0 n y n ruditapes_c10763 -? 0.456 0.555 0 n y n ruditapes2_c6753 -1.257 0.457 dynein heavy chain /// 0000166 // nucleotide binding /// 0017111 // nucleoside-triphosphatase activity /// 0009987 // cellular process 25.289 20.12 n n n ruditapes_c14039 -1.278 0.457 21.988 17.2 n n n ruditapes_c11190 -1.355 0.457 14.607 10.779 n n n ruditapes_c23224 -1.365 0.457 13.991 10.252 n n n ruditapes_lrc32185 -1.508 0.457 8.368 5.55 n y n ruditapes_c27270 -1.535 0.457 7.75 5.049 n y n ruditapes_c26103 -1.679 0.457 5.543 3.301 n y n ruditapes_c25760 -1.703 0.457 5.27 3.094 n y n ruditapes_c7419 2.308 0.457 transmembrane protein 85 1.054 2.432 n y n ruditapes_c23855 2.423 0.457 dna replication licensing factor mcm7 /// 0000785 // chromatin /// 0005656 // pre-replicative complex /// 0030174 // regulation of DNA replication initiation /// 0006268 // DNA unwinding during replication /// 0016887 // ATPase activity /// 0043138 // 3'-5' DNA helicase activity /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0006267 // pre-replicative complex assembly /// 0042555 // MCM complex /// 0003682 // chromatin binding 0.92 2.23 n y n ruditapes2_lrc5831 2.441 0.457 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.904 2.207 n y n ruditapes_lrc34948 2.548 0.457 0.807 2.057 n y n ruditapes_c20891 -1.906 0.457 3.803 1.995 n y n ruditapes_c7785 -2.022 0.457 serine threonine kinase receptor associated protein /// 0008380 // RNA splicing /// 0005681 // spliceosomal complex /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0042802 // identical protein binding /// 0006397 // mRNA processing /// 0005737 // cytoplasm /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway /// 0005102 // receptor binding /// 0016301 // kinase activity /// 0004872 // receptor activity 3.299 1.632 n y n ruditapes_c10639 -2.154 0.457 2.865 1.33 n y n ruditapes_c13730 -2.647 0.457 1.993 0.753 n y n ruditapes_c8087 -2.654 0.457 1.982 0.747 n y n ruditapes_c8881 11.692 0.457 0.061 0.716 n y n ruditapes_c25983 -2.908 0.457 1.748 0.601 n y n ruditapes_c10987 -3.002 0.457 1.678 0.559 n y n ruditapes_c8716 ? 0.457 rho gtpase activating protein 21 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane 0 0.552 n y n ruditapes_c19319 -3.336 0.457 1.481 0.444 n y n ruditapes_s39699 -4.448 0.457 1.135 0.255 n y n ruditapes_c19088 -5.337 0.457 0.998 0.187 n y n ruditapes_c26202 -7.783 0.457 0.823 0.106 n y n ruditapes_c20280 -17.79 0.457 0.658 0.037 n y n ruditapes_c20463 -? 0.457 0.554 0 n y n ruditapes_c25840 -? 0.457 0.554 0 n y n ruditapes_c4689 -? 0.457 0.554 0 n y n ruditapes2_lrc7450 -? 0.457 eukaryotic translation initiation factor subunit h /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0005792 // microsome 0.553 0 n y n ruditapes_c2743 -1.114 0.458 beta-tubulin 113.786 102.141 n n n ruditapes_c33527 -1.165 0.458 55.585 47.692 n n n ruditapes2_c1899 -1.247 0.458 26.976 21.636 n n n ruditapes2_c739 1.408 0.458 7.658 10.782 n n n ruditapes2_c747 -1.431 0.458 nucleoredoxin 1 10.727 7.497 n n n ruditapes_lrc22553 -1.555 0.458 7.313 4.703 n y n ruditapes2_c3048 1.997 0.458 cathepsin b /// 0006508 // proteolysis /// 0050790 // regulation of catalytic activity /// 0004197 // cysteine-type endopeptidase activity 1.628 3.251 n y n ruditapes_c6492 2.11 0.458 1.368 2.886 n y n ruditapes_c26600 -2.065 0.458 3.129 1.515 n y n ruditapes_c21486 8.994 0.458 0.086 0.772 n y n ruditapes_c26844 -2.628 0.458 2.006 0.763 n y n ruditapes_c12444 ? 0.458 endo alpha- polygalactosaminidase precusor 0 0.55 n y n ruditapes_c1690 ? 0.458 0 0.55 n y n ruditapes_c7368 ? 0.458 0 0.55 n y n ruditapes_c24019 -3.437 0.458 1.43 0.416 n y n ruditapes_c11159 -3.706 0.458 1.322 0.357 n y n ruditapes_c30176 -4.448 0.458 1.128 0.254 n y n ruditapes_c31219 -5.189 0.458 1.013 0.195 n y n ruditapes_c25468 -6.227 0.458 0.912 0.146 n y n ruditapes_c12218 -6.393 0.458 mannose c type 2 0.898 0.14 n y n ruditapes_c20228 -17.79 0.458 0.654 0.037 n y n ruditapes_c11457 -? 0.458 0.551 0 n y n ruditapes_c21302 -? 0.458 0.551 0 n y n ruditapes_c18568 -? 0.458 0.55 0 n y n ruditapes_c25954 -1.442 0.459 10.238 7.101 n n n ruditapes_c7474 -1.529 0.459 7.812 5.11 n y n ruditapes_c7838 -1.606 0.459 "PREDICTED: hypothetical protein, partial [Tribolium castaneum]" 6.412 3.993 n y n ruditapes_c29715 1.938 0.459 1.797 3.483 n y n ruditapes_c15948 -1.702 0.459 5.237 3.077 n y n ruditapes_c21857 -1.873 0.459 3.959 2.114 n y n ruditapes_c11544 2.558 0.459 0.794 2.03 n y n ruditapes_c3602 -2.01 0.459 3.313 1.648 n y n ruditapes2_c3159 -2.088 0.459 serine proteases and ovochymase regions 3.042 1.457 n y n ruditapes_c8228 -2.172 0.459 2.796 1.287 n y n ruditapes2_c2110 4.272 0.459 nadh dehydrogenase subunit 4l 0.268 1.147 n y n ruditapes_c23555 -2.471 0.459 2.198 0.889 n y n ruditapes2_lrc4613 -2.859 0.459 cytochrome c oxidase subunit via 1.773 0.62 n y n ruditapes_c22263 ? 0.459 0 0.549 n y n ruditapes_c16240 ? 0.459 vitellogenin 0 0.548 n y n ruditapes_c27480 -3.812 0.459 1.282 0.336 n y n ruditapes_c10929 -4.043 0.459 1.214 0.3 n y n ruditapes_c10408 -4.17 0.459 1.186 0.284 n y n ruditapes_c27722 -4.67 0.459 1.082 0.232 n y n ruditapes2_c1746 -10.007 0.459 0.745 0.074 n y n ruditapes_lrc13364 -15.566 0.459 0.668 0.043 n y n ruditapes_c22502 -17.79 0.459 0.651 0.037 n y n ruditapes_c20619 -? 0.459 0.548 0 n y n ruditapes2_c1185 1.319 0.46 11.857 15.641 n n n ruditapes_c16539 -1.293 0.46 19.891 15.382 n n n ruditapes2_lrc3516 -1.337 0.46 mitochondrial cytochrome c oxidase subunit 5a 15.725 11.762 n n n ruditapes2_c2321 -1.342 0.46 15.306 11.402 n n n ruditapes_c29598 -1.389 0.46 g kinase anchoring protein 1 12.471 8.978 n n n ruditapes_c18669 -1.433 0.46 10.537 7.351 n n n ruditapes2_c1881 -1.488 0.46 8.768 5.894 n n n ruditapes2_c697 -1.533 0.46 14 kda subunit splicing factor 3b 7.706 5.028 n y n ruditapes_c1797 -1.754 0.46 histone h2a /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 4.745 2.706 n y n ruditapes_c20772 -2.038 0.46 3.196 1.568 n y n ruditapes_c8330 -2.104 0.46 l _3 2.976 1.415 n y n ruditapes_c23151 -2.156 0.46 2.821 1.308 n y n ruditapes_c15834 4.16 0.46 hypothetical protein BRAFLDRAFT_70649 [Branchiostoma floridae] 0.28 1.167 n y n ruditapes_lrc28786 ? 0.46 0 0.546 n y n ruditapes_c8910 ? 0.46 0 0.545 n y n ruditapes2_c3677 -3.113 0.46 mitochondrial 28s ribosomal protein s33 /// 0005763 // mitochondrial small ribosomal subunit /// 0003735 // structural constituent of ribosome 1.582 0.508 n y n ruditapes_c19330 -3.401 0.46 p53-related protein kinase "/// 0016772 // transferase activity, transferring phosphorus-containing groups" 1.429 0.42 n y n ruditapes_c25501 -3.558 0.46 1.364 0.383 n y n ruditapes_c9563 -4.818 0.46 1.056 0.219 n y n ruditapes_c15781 -5.559 0.46 0.964 0.173 n y n ruditapes_c31169 -5.559 0.46 hypothetical protein BRAFLDRAFT_71630 [Branchiostoma floridae] 0.964 0.173 n y n ruditapes_c31930 -? 0.46 0.547 0 n y n ruditapes_c21895 -? 0.46 0.545 0 n y n ruditapes_c9896 -1.344 0.461 15.146 11.268 n n n ruditapes_c18575 1.535 0.461 4.663 7.159 n y n ruditapes_c26742 1.686 0.461 3.025 5.101 n y n ruditapes_c28520 -1.656 0.461 5.7 3.442 n y n ruditapes_c24083 -1.701 0.461 5.211 3.065 n y n ruditapes_c23801 -1.846 0.461 4.066 2.202 n y n ruditapes2_lrc3139 -1.861 0.461 3.984 2.141 n y n ruditapes_c13168 -2.372 0.461 2.342 0.987 n y n ruditapes_c23029 -2.388 0.461 2.312 0.968 n y n ruditapes_lrc16805 ? 0.461 nadh dehydrogenase subunit 4l 0 0.545 n y n ruditapes_c25772 ? 0.461 0 0.543 n y n ruditapes_c22515 ? 0.461 0 0.542 n y n ruditapes_c22947 -3.336 0.461 origin recognition complex subunit 3 protein 1.456 0.437 n y n ruditapes_c30593 -3.336 0.461 1.456 0.437 n y n ruditapes_c22228 -3.437 0.461 1.405 0.409 n y n ruditapes_c11458 -4.448 0.461 1.114 0.251 n y n ruditapes_c5134 -4.448 0.461 1.114 0.251 n y n ruditapes_c20094 -4.726 0.461 1.065 0.225 n y n ruditapes_c28810 -4.818 0.461 1.05 0.218 n y n ruditapes_c23627 -7.783 0.461 0.811 0.104 n y n ruditapes2_lrc7224 -7.783 0.461 kallikrein plasma (fletcher factor) 1 /// 0016787 // hydrolase activity 0.809 0.104 n y n ruditapes_c21442 -11.119 0.461 atp gtp-binding protein 0.715 0.064 n y n ruditapes_lrc15530 -22.238 0.461 0.623 0.028 n y n ruditapes_c113 -? 0.461 0.544 0 n y n ruditapes_c29566 -? 0.461 0.543 0 n y n ruditapes_c9352 -1.241 0.462 27.516 22.163 n n n ruditapes_c4273 -1.272 0.462 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 22.378 17.593 n n n ruditapes_c4953 -1.397 0.462 11.988 8.582 n n n ruditapes_c8141 -1.578 0.462 viral a-type inclusion protein 6.771 4.291 n y n ruditapes_c24752 2.024 0.462 1.534 3.104 n y n ruditapes_c25313 -1.756 0.462 4.696 2.675 n y n ruditapes_c15562 -1.897 0.462 3.776 1.991 n y n ruditapes_c794 -2.279 0.462 2.508 1.1 n y n ruditapes_c18233 -2.327 0.462 2.414 1.037 n y n ruditapes_c9259 -2.372 0.462 2.333 0.984 n y n ruditapes_c3169 -2.669 0.462 1.923 0.721 n y n ruditapes2_lrc5609 -2.878 0.462 1.729 0.601 n y n ruditapes_c18306 -2.965 0.462 1.664 0.561 n y n ruditapes_c20862 ? 0.462 0 0.542 n y n ruditapes_c6972 ? 0.462 protein tyrosine receptor o /// 0006470 // protein amino acid dephosphorylation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity /// 0005887 // integral to plasma membrane 0 0.541 n y n ruditapes_c12272 -3.25 0.462 1.49 0.458 n y n ruditapes_s38871 -3.336 0.462 1.444 0.433 n y n ruditapes_c24407 -17.79 0.462 0.642 0.036 n y n ruditapes_c18982 -? 0.462 0.54 0 n y n ruditapes2_c1105 -1.431 0.463 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0003824 // catalytic activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 10.474 7.319 n n n ruditapes_c2461 -1.541 0.463 7.421 4.815 n y n ruditapes2_c2486 1.736 0.463 2.66 4.619 n y n ruditapes_lrc11426 1.763 0.463 2.497 4.401 n y n ruditapes2_c1058 -1.77 0.463 proteasome ( macropain) beta 7 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 4.554 2.573 n y n ruditapes_lrc32502 2.57 0.463 0.769 1.977 n y n ruditapes_lrc32325 -1.964 0.463 3.445 1.754 n y n ruditapes_c4261 -2.144 0.463 mitochondrial 50s ribosomal protein 2.821 1.316 n y n ruditapes_c18422 -2.16 0.463 2.774 1.284 n y n ruditapes2_c2954 -2.224 0.463 2.618 1.177 n y n ruditapes_c29064 5.396 0.463 0.178 0.958 n y n ruditapes_c20600 -2.575 0.463 2.023 0.786 n y n ruditapes_c24885 -2.878 0.463 1.722 0.598 n y n ruditapes_c19820 ? 0.463 0 0.539 n y n ruditapes_c30563 ? 0.463 0 0.539 n y n ruditapes_lrc31715 ? 0.463 0 0.539 n y n ruditapes_c23332 ? 0.463 0 0.538 n y n ruditapes_lrc33895 ? 0.463 0 0.538 n y n ruditapes_c13612 -3.953 0.463 1.217 0.308 n y n ruditapes_c5467 -5.337 0.463 0.973 0.182 n y n ruditapes_c16461 -5.401 0.463 0.967 0.179 n y n ruditapes_c9650 -7.227 0.463 0.83 0.115 n y n ruditapes_c24205 -20.014 0.463 0.626 0.031 n y n ruditapes_s34110 -? 0.463 0.538 0 n y n ruditapes_c27968 -1.119 0.464 tubulin subunit beta /// 0005200 // structural constituent of cytoskeleton /// 0051225 // spindle assembly /// 0005874 // microtubule 100.766 90.014 n n n ruditapes_c8424 1.339 0.464 10.445 13.986 n n n ruditapes_c24713 -1.431 0.464 10.408 7.273 n n n ruditapes_c19957 -1.552 0.464 7.167 4.616 n y n ruditapes_c30063 -1.61 0.464 6.241 3.878 n y n ruditapes_c8055 -1.64 0.464 5.82 3.55 n y n ruditapes_c2428 -1.697 0.464 5.173 3.048 n y n ruditapes_c12717 2.129 0.464 protein 1.299 2.764 n y n ruditapes_c30382 -1.744 0.464 4.745 2.721 n y n ruditapes_c13050 -1.773 0.464 4.507 2.543 n y n ruditapes_c7200 -1.83 0.464 mitochondrial import inner membrane translocase subunit tim13 /// 0046872 // metal ion binding /// 0016020 // membrane /// 0006626 // protein targeting to mitochondrion /// 0005740 // mitochondrial envelope 4.118 2.25 n y n ruditapes2_c5110 -2.284 0.464 transforming growth beta- 68kda 2.478 1.085 n y n ruditapes_c22447 5.396 0.464 0.177 0.954 n y n ruditapes_c11746 -2.628 0.464 1.955 0.744 n y n ruditapes_c27351 -2.908 0.464 hira interacting protein 5 /// 0005488 // binding 1.693 0.582 n y n ruditapes_c14661 ? 0.464 0 0.537 n y n ruditapes_c21265 -3.437 0.464 1.39 0.404 n y n ruditapes_c18578 -3.437 0.464 1.387 0.404 n y n ruditapes_c26382 -3.558 0.464 1.34 0.377 n y n ruditapes_c24823 -4.003 0.464 1.198 0.299 n y n ruditapes2_lrc6394 -4.942 0.464 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 1.02 0.206 n y n ruditapes_c11651 -5.559 0.464 0.945 0.17 n y n ruditapes_c28382 -17.79 0.464 0.637 0.036 n y n ruditapes_c24245 -? 0.464 0.537 0 n y n ruditapes2_c5381 -? 0.464 chondroitin sulfate proteoglycan 2 /// 0005488 // binding 0.536 0 n y n ruditapes_lrc33878 1.252 0.465 ribosomal protein s15 /// 0005840 // ribosome 17.818 22.316 n n n ruditapes2_lrc6791 1.283 0.465 ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 14.484 18.578 n n n ruditapes_c19084 -1.35 0.465 14.455 10.708 n n n ruditapes_c8425 1.424 0.465 cathepsin l /// 0016787 // hydrolase activity 6.941 9.884 n n n ruditapes2_c1317 -1.38 0.465 12.699 9.205 n n n ruditapes_c13670 -1.503 0.465 8.195 5.454 n y n ruditapes2_c1843 -1.545 0.465 39s ribosomal protein mitochondrial 7.296 4.724 n y n ruditapes_c5802 -1.571 0.465 6.792 4.323 n y n ruditapes2_c2584 -1.627 0.465 replication protein 32kda "/// 0006297 // nucleotide-excision repair, DNA gap filling /// 0000718 // nucleotide-excision repair, DNA damage removal /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005662 // DNA replication factor A complex /// 0006261 // DNA-dependent DNA replication /// 0003697 // single-stranded DNA binding" 5.952 3.658 n y n ruditapes_c15639 -1.654 0.465 5.617 3.397 n y n ruditapes2_c2354 2.878 0.465 profilin 0.58 1.67 n y n ruditapes_c28491 -2.409 0.465 2.236 0.928 n y n ruditapes_c21799 -2.628 0.465 1.947 0.741 n y n ruditapes_lrc36811 -4.077 0.465 1.175 0.288 n y n ruditapes_s36179 -5.003 0.465 hypothetical protein BRAFLDRAFT_117811 [Branchiostoma floridae] 1.006 0.201 n y n ruditapes_c24287 -5.559 0.465 0.942 0.169 n y n ruditapes_c15039 -5.782 0.465 0.922 0.159 n y n ruditapes_c30658 -6.671 0.465 0.852 0.128 n y n ruditapes_c17346 -7.413 0.465 0.814 0.11 n y n ruditapes_c20101 -8.895 0.465 0.756 0.085 n y n ruditapes2_c35 -9.451 0.465 ctrb1 protein /// 0016787 // hydrolase activity 0.739 0.078 n y n ruditapes_lrc36207 -17.79 0.465 nadh dehydrogenase iron-sulfur protein 5 0.635 0.036 n y n ruditapes_c15099 -17.79 0.465 0.633 0.036 n y n ruditapes_lrc29262 -? 0.465 0.533 0 n y n ruditapes2_c4000 -1.507 0.466 8.065 5.351 n y n ruditapes2_c5762 -1.507 0.466 mitochondrial ribosomal protein s18a /// 0030529 // ribonucleoprotein complex 8.06 5.349 n y n ruditapes_lrc35901 -1.519 0.466 atp synthase subunit b 7.799 5.134 n y n ruditapes_c12912 1.814 0.466 2.213 4.013 n y n ruditapes_c15653 -1.619 0.466 6.03 3.724 n y n ruditapes2_c177 -1.723 0.466 4.893 2.84 n y n ruditapes_c28461 -1.934 0.466 3.524 1.822 n y n ruditapes_c17617 3.373 0.466 0.409 1.378 n y n ruditapes_s39056 3.897 0.466 elongation factor 1-beta 0.308 1.199 n y n ruditapes_lrc30479 4.272 0.466 0.26 1.109 n y n ruditapes_lrc18142 -2.377 0.466 ribosomal protein l11 /// 0006414 // translational elongation /// 0006605 // protein targeting /// 0005730 // nucleolus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development /// 0042273 // ribosomal large subunit biogenesis 2.282 0.96 n y n ruditapes_c18389 -2.965 0.466 1.632 0.55 n y n ruditapes_lrc28414 ? 0.466 0 0.532 n y n ruditapes_c16409 ? 0.466 hypothetical protein BRAFLDRAFT_89710 [Branchiostoma floridae] 0 0.531 n y n ruditapes_c19643 ? 0.466 0 0.531 n y n ruditapes_c26566 ? 0.466 0 0.531 n y n ruditapes_c11187 -4.13 0.466 1.157 0.28 n y n ruditapes_lrc32604 -4.726 0.466 predicted protein [Nematostella vectensis] 1.041 0.22 n y n ruditapes_c25556 -5.559 0.466 0.935 0.168 n y n ruditapes_c18574 -6.115 0.466 0.886 0.145 n y n ruditapes_c1869 -7.116 0.466 methionine sulfoxide reductase b3 /// 0005739 // mitochondrion /// 0016491 // oxidoreductase activity 0.825 0.116 n y n ruditapes2_c1005 -7.413 0.466 0.81 0.109 n y n ruditapes2_c6314 -7.783 0.466 0.792 0.102 n y n ruditapes_c8580 -8.895 0.466 0.754 0.085 n y n ruditapes_s39853 -10.007 0.466 0.725 0.072 n y n ruditapes_c1182 -? 0.466 0.531 0 n y n ruditapes_c29135 -? 0.466 sarcoplasmic calcium-binding protein 0.531 0 n y n ruditapes_c17181 -1.215 0.467 33.187 27.32 n n n ruditapes2_c3769 -1.247 0.467 eukaryotic translation elongation factor 1 beta 2 /// 0044444 // cytoplasmic part /// 0005488 // binding /// 0006412 // translation 25.9 20.776 n n n ruditapes_c4699 -1.342 0.467 14.898 11.102 n n n ruditapes_c22805 -1.359 0.467 13.755 10.119 n n n ruditapes_c353 -1.403 0.467 protein /// 0005216 // ion channel activity /// 0016020 // membrane 11.386 8.113 n n n ruditapes_c1192 1.594 0.467 3.783 6.032 n y n ruditapes_c7438 -1.864 0.467 3.855 2.068 n y n ruditapes_c10558 3.148 0.467 0.472 1.484 n y n ruditapes_c22909 -2.057 0.467 3.026 1.471 n y n ruditapes_c4736 3.597 0.467 serine proteinase /// 0005488 // binding 0.357 1.285 n y n ruditapes2_c1955 -2.654 0.467 1.902 0.717 n y n ruditapes_c21811 -2.919 0.467 1.661 0.569 n y n ruditapes_c11951 ? 0.467 hypothetical protein BRAFLDRAFT_260539 [Branchiostoma floridae] 0 0.529 n y n ruditapes_c15147 -3.459 0.467 1.359 0.393 n y n ruditapes_c22847 -3.639 0.467 1.29 0.355 n y n ruditapes2_lrc6590 -3.892 0.467 1.212 0.311 n y n ruditapes_c22373 -4.818 0.467 1.024 0.212 n y n ruditapes_c24822 -11.119 0.467 0.697 0.063 n y n ruditapes_c25576 -13.343 0.467 0.667 0.05 n y n ruditapes2_lrc6383 -1.254 0.468 24.492 19.529 n n n ruditapes_c5555 -1.306 0.468 17.83 13.651 n n n ruditapes2_c463 -1.358 0.468 13.739 10.119 n n n ruditapes_lrc38033 -1.442 0.468 9.877 6.851 n n n ruditapes_lrc35480 -1.609 0.468 myosin alkali light chain 1 /// 0003774 // motor activity /// 0016459 // myosin complex /// 0005509 // calcium ion binding 6.132 3.81 n y n ruditapes_c16404 -1.749 0.468 4.618 2.64 n y n ruditapes_c12344 -1.869 0.468 3.809 2.038 n y n ruditapes_lrc28680 3.71 0.468 0.335 1.243 n y n ruditapes_c4366 -2.224 0.468 myosin heavy chain /// 0016459 // myosin complex /// 0003779 // actin binding /// 0000166 // nucleotide binding /// 0005737 // cytoplasm 2.566 1.154 n y n ruditapes2_c1016 -2.438 0.468 cysteine and glycine-rich protein 3 (cardiac lim protein) /// 0007275 // multicellular organismal development /// 0005488 // binding /// 0044424 // intracellular part 2.162 0.887 n y n ruditapes_c14010 ? 0.468 0 0.527 n y n ruditapes_c32061 ? 0.468 0 0.527 n y n ruditapes_c16753 ? 0.468 0 0.526 n y n ruditapes_c18508 -3.25 0.468 1.449 0.446 n y n ruditapes_c14280 -3.437 0.468 1.364 0.397 n y n ruditapes_c15037 -3.953 0.468 1.194 0.302 n y n ruditapes_c16903 -4.077 0.468 1.162 0.285 n y n ruditapes_c23187 -4.448 0.468 1.082 0.243 n y n ruditapes_c26727 -6.671 0.468 0.84 0.126 n y n ruditapes_c11555 -17.79 0.468 0.625 0.035 n y n ruditapes_c11670 -? 0.468 0.527 0 n y n ruditapes_c19015 -? 0.468 0.527 0 n y n ruditapes2_c611 -1.16 0.469 56.17 48.42 n n n ruditapes_c25708 -1.259 0.469 23.608 18.756 n n n ruditapes_c7414 1.387 0.469 nonmuscle myosin essential light chain "/// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0042623 // ATPase activity, coupled /// 0032036 // myosin heavy chain binding /// 0005509 // calcium ion binding /// 0016461 // unconventional myosin complex" 8.051 11.164 n n n ruditapes2_c1753 -1.409 0.469 11.075 7.861 n n n ruditapes_c11361 -1.409 0.469 11.058 7.847 n n n ruditapes2_c1077 1.515 0.469 4.817 7.298 n y n ruditapes_c1021 -1.451 0.469 9.473 6.527 n n n ruditapes_c14767 -1.495 0.469 8.252 5.519 n n n ruditapes_lrc34147 -1.675 0.469 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 5.298 3.162 n y n ruditapes2_c261 2.248 0.469 mitochondrial 39s ribosomal protein l27 /// 0005622 // intracellular 1.074 2.415 n y n ruditapes2_c3553 2.984 0.469 universal stress protein 0.524 1.564 n y n ruditapes_c14042 -2.224 0.469 2.547 1.145 n y n ruditapes_c25162 -2.224 0.469 2.545 1.145 n y n ruditapes_lrc17968 -2.402 0.469 2.213 0.921 n y n ruditapes_c25702 -2.409 0.469 2.201 0.914 n y n ruditapes2_c2689 6.296 0.469 0.136 0.853 n y n ruditapes_c8789 -2.692 0.469 nicotinic acetylcholine receptor subunit type g 1.845 0.686 n y n ruditapes_c12271 -2.846 0.469 1.7 0.597 n y n ruditapes2_c3422 -2.898 0.469 isoform cra_a 1.666 0.575 n y n ruditapes_c29694 -2.986 0.469 1.598 0.535 n y n ruditapes_c13412 ? 0.469 0 0.525 n y n ruditapes_c23305 ? 0.469 0 0.525 n y n ruditapes_c19451 -3.15 0.469 1.499 0.476 n y n ruditapes_c14363 -3.336 0.469 cg18508 1.405 0.421 n y n ruditapes2_lrc6837 -4.077 0.469 1.153 0.283 n y n ruditapes_c20920 -4.765 0.469 1.024 0.215 n y n ruditapes_c18921 -7.413 0.469 0.799 0.108 n y n ruditapes_c25617 -7.783 0.469 0.78 0.1 n y n ruditapes2_c6655 -8.339 0.469 calmodulin /// 0005515 // protein binding 0.76 0.091 n y n ruditapes_c5249 -8.895 0.469 fibrinogen and fibronectin 0.743 0.084 n y n ruditapes_lrc8635 -13.343 0.469 0.661 0.05 n y n ruditapes2_c1192 -16.678 0.469 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0.629 0.038 n y n ruditapes_c19954 -? 0.469 0.524 0 n y n ruditapes_lrc34507 -1.117 0.47 60s ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0000166 // nucleotide binding /// 0003735 // structural constituent of ribosome 103.197 92.427 n n n ruditapes_c18565 -1.164 0.47 53.785 46.221 n n n ruditapes_c14035 1.312 0.47 11.758 15.432 n n n ruditapes_c2941 -1.441 0.47 9.821 6.818 n n n ruditapes_c16741 1.578 0.47 3.909 6.169 n y n ruditapes_c1792 1.871 0.47 h aca ribonucleoprotein complex subunit 3 /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0003676 // nucleic acid binding /// 0006364 // rRNA processing 1.941 3.631 n y n ruditapes2_c3923 2.22 0.47 transmembrane protein 14c /// 0005739 // mitochondrion /// 0016021 // integral to membrane 1.11 2.464 n y n ruditapes_c19803 -1.873 0.47 3.757 2.006 n y n ruditapes2_c5362 2.833 0.47 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0055114 // oxidation reduction /// 0005740 // mitochondrial envelope 0.589 1.669 n y n ruditapes_c16559 -3.113 0.47 1.508 0.484 n y n ruditapes_c30371 -3.212 0.47 cytochrome family subfamily polypeptide 1 /// 0046872 // metal ion binding 1.458 0.454 n y n ruditapes_c28070 -3.421 0.47 1.358 0.397 n y n ruditapes_c7446 -4.448 0.47 1.07 0.241 n y n ruditapes2_c252 -4.67 0.47 1.031 0.221 n y n ruditapes_lrc33491 -6.671 0.47 wsc domain protein 0.833 0.125 n y n ruditapes_c8715 -13.343 0.47 0.657 0.049 n y n ruditapes_c7329 -? 0.47 0.523 0 n y n ruditapes_c26977 -? 0.47 0.522 0 n y n ruditapes2_c309 -? 0.47 0.521 0 n y n ruditapes_c7689 -? 0.47 0.521 0 n y n ruditapes2_lrc5565 -1.15 0.471 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 63.017 54.794 n n n ruditapes_c10530 -1.357 0.471 squamous cell carcinoma /// 0048534 // hemopoietic or lymphoid organ development /// 0006396 // RNA processing 13.603 10.024 n n n ruditapes_c9902 -1.565 0.471 6.747 4.311 n y n ruditapes_c13125 2.099 0.471 misexpression suppressor of ras 3 1.315 2.759 n y n ruditapes_c20518 -1.906 0.471 3.577 1.876 n y n ruditapes2_c833 -1.917 0.471 chain nmr-structure of tryparedoxin 1 /// 0003824 // catalytic activity 3.531 1.842 n y n ruditapes_c12842 -1.919 0.471 3.515 1.832 n y n ruditapes_lrc32591 -1.962 0.471 nadh dehydrogenase iron-sulfur protein mitochondrial precursor 3.33 1.697 n y n ruditapes_c5973 2.968 0.471 0.527 1.563 n y n ruditapes_c21534 8.544 0.471 0.087 0.741 n y n ruditapes_c10017 ? 0.471 0 0.52 n y n ruditapes_c24807 ? 0.471 0 0.52 n y n ruditapes_c12121 ? 0.471 purine-rich binding protein-alpha /// 0016563 // transcription activator activity /// 0003697 // single-stranded DNA binding 0 0.519 n y n ruditapes_c13630 ? 0.471 protein /// 0005488 // binding 0 0.519 n y n ruditapes2_c4008 -4.448 0.471 1.067 0.24 n y n ruditapes_c9021 -5.683 0.471 collectin sub-family member 12 /// 0005488 // binding 0.906 0.159 n y n ruditapes_c10542 -10.007 0.471 sarcoplasmic calcium-binding protein 0.709 0.071 n y n ruditapes_c17218 -? 0.471 0.519 0 n y n ruditapes2_c382 -1.165 0.472 rna binding motif protein "/// 0006396 // RNA processing /// 0045475 // locomotor rhythm /// 0005634 // nucleus /// 0007303 // cytoplasmic transport, nurse cell to oocyte /// 0003729 // mRNA binding /// 0000166 // nucleotide binding /// 0008104 // protein localization /// 0040011 // locomotion /// 0045804 // negative regulation of eclosion /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding /// 0008062 // eclosion rhythm /// 0009790 // embryonic development" 52.309 44.884 n n n ruditapes_c1883 -1.27 0.472 proline-rich transmembrane protein 1 21.689 17.08 n n n ruditapes_c24712 1.501 0.472 4.986 7.485 n y n ruditapes_c10737 -1.421 0.472 10.407 7.323 n n n ruditapes2_c2010 -1.429 0.472 10.145 7.099 n n n ruditapes_c20917 1.613 0.472 3.507 5.657 n y n ruditapes2_c1160 -1.714 0.472 4.837 2.823 n y n ruditapes2_lrc4798 -1.958 0.472 3.332 1.702 n y n ruditapes_lrc34029 2.968 0.472 0.525 1.559 n y n ruditapes_c25614 -2.059 0.472 aminotransferase-like protein /// 0030170 // pyridoxal phosphate binding /// 0003824 // catalytic activity /// 0008152 // metabolic process 2.959 1.437 n y n ruditapes_lrc33071 -2.493 0.472 2.051 0.822 n y n ruditapes_c15126 -2.527 0.472 gata zinc finger domain containing 1 "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0008270 // zinc ion binding" 2.006 0.794 n y n ruditapes_c25846 -2.641 0.472 1.868 0.708 n y n ruditapes_c18013 ? 0.472 twister 0 0.517 n y n ruditapes_c8267 -3.25 0.472 1.423 0.438 n y n ruditapes_c25297 -3.812 0.472 1.211 0.318 n y n ruditapes_c11618 -17.79 0.472 0.615 0.035 n y n ruditapes_c16331 -20.014 0.472 0.602 0.03 n y n ruditapes_c14619 -? 0.472 0.518 0 n y n ruditapes_c13063 -1.203 0.473 paramyosin /// 0044424 // intracellular part 35.651 29.636 n n n ruditapes_c13904 -1.333 0.473 15.168 11.382 n n n ruditapes_s34187 1.391 0.473 60s ribosomal protein l32 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 7.756 10.787 n n n ruditapes_c12320 -1.364 0.473 13.132 9.629 n n n ruditapes2_c712 -1.392 0.473 11.637 8.36 n n n ruditapes_c28624 -1.416 0.473 10.588 7.477 n n n ruditapes_c22002 -1.51 0.473 7.754 5.136 n y n ruditapes_c9355 -1.791 0.473 4.197 2.343 n y n ruditapes_c4888 2.323 0.473 0.965 2.242 n y n ruditapes_c16450 -1.94 0.473 3.381 1.743 n y n ruditapes_c15240 -1.99 0.473 growth arrest and dna-damage- beta /// 0032502 // developmental process /// 0050794 // regulation of cellular process /// 0045859 // regulation of protein kinase activity 3.18 1.598 n y n ruditapes_c16689 -1.998 0.473 3.161 1.582 n y n ruditapes_c5010 -2.16 0.473 2.656 1.229 n y n ruditapes_c7038 -2.398 0.473 2.181 0.91 n y n ruditapes_c2095 -2.414 0.473 acyl- synthetase long-chain family member 6 /// 0005739 // mitochondrion /// 0003824 // catalytic activity /// 0008152 // metabolic process 2.156 0.893 n y n ruditapes_c30086 6.745 0.473 0.12 0.811 n y n ruditapes_c19641 -2.594 0.473 1.908 0.736 n y n ruditapes_c24382 9.443 0.473 0.075 0.71 n y n ruditapes_c24863 ? 0.473 0 0.516 n y n ruditapes_c27418 ? 0.473 PREDICTED: similar to ENSANGP00000024799 [Strongylocentrotus purpuratus] 0 0.515 n y n ruditapes_c573 ? 0.473 0 0.514 n y n ruditapes_lrc34861 -3.892 0.473 atp synthase beta subunit "/// 0005524 // ATP binding /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 1.183 0.304 n y n ruditapes_s40460 -4.077 0.473 1.134 0.278 n y n ruditapes_c31233 -4.448 0.473 1.056 0.238 n y n ruditapes_c9172 -6.115 0.473 0.859 0.14 n y n ruditapes_lrc31571 -6.671 0.473 0.822 0.123 n y n ruditapes_c25079 -10.007 0.473 "trypsin-gamma, putative [Pediculus humanus corporis]" 0.702 0.07 n y n ruditapes_c12496 -13.343 0.473 0.647 0.049 n y n ruditapes_c25331 1.405 0.474 7.219 10.145 n n n ruditapes_c745 -1.478 0.474 8.513 5.761 n n n ruditapes_c7597 -1.634 0.474 protein /// 0009987 // cellular process 5.635 3.449 n y n ruditapes_c8080 -1.688 0.474 5.034 2.982 n y n ruditapes_c17212 -1.873 0.474 3.689 1.97 n y n ruditapes_c19508 ? 0.474 0 0.513 n y n ruditapes2_c1679 -3.41 0.474 nucleoredoxin-like protein 2 1.341 0.393 n y n ruditapes_c2638 -3.437 0.474 sperm associated antigen 8 1.328 0.386 n y n ruditapes_c1408 -4.003 0.474 1.147 0.286 n y n ruditapes_c9106 -5.782 0.474 0.884 0.153 n y n ruditapes_c16887 -6.671 0.474 0.82 0.123 n y n ruditapes_c29577 -10.007 0.474 0.697 0.07 n y n ruditapes_c4430 -? 0.474 qvr_drovi ame: full=protein quiver ame: full=protein sleepless flags: precursor 0.512 0 n y n ruditapes2_lrc5302 1.222 0.475 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 21.514 26.289 n n n ruditapes2_c627 -1.33 0.475 15.221 11.441 n n n ruditapes_c30477 -1.395 0.475 11.375 8.156 n n n ruditapes2_c2655 -1.551 0.475 6.838 4.408 n y n ruditapes_c31766 1.799 0.475 2.188 3.937 n y n ruditapes_c16925 -1.626 0.475 axonemal dynein light chain p33 5.712 3.512 n y n ruditapes_c9375 -1.779 0.475 4.254 2.391 n y n ruditapes_c6541 -1.934 0.475 3.379 1.747 n y n ruditapes_c7509 -1.96 0.475 3.275 1.671 n y n ruditapes2_lrc5053 5.696 0.475 0.154 0.88 n y n ruditapes_c18849 -2.527 0.475 1.977 0.782 n y n ruditapes2_c2984 -2.804 0.475 1.688 0.602 n y n ruditapes_c21982 -2.878 0.475 1.635 0.568 n y n ruditapes_lrc32989 -3.002 0.475 1.543 0.514 n y n ruditapes_c16312 ? 0.475 0 0.511 n y n ruditapes_c23243 ? 0.475 0 0.511 n y n ruditapes_c29271 ? 0.475 0 0.511 n y n ruditapes_c24330 ? 0.475 0 0.51 n y n ruditapes_c28690 -3.262 0.475 1.397 0.428 n y n ruditapes2_c1408 -3.336 0.475 1.363 0.409 n y n ruditapes_c26428 -3.558 0.475 1.273 0.358 n y n ruditapes_c6548 -4.2 0.475 1.094 0.26 n y n ruditapes_c28751 -5.003 0.475 0.961 0.192 n y n ruditapes_c12432 -10.007 0.475 0.694 0.069 n y n ruditapes_c24720 -13.343 0.475 0.643 0.048 n y n ruditapes_c12342 -17.79 0.475 0.605 0.034 n y n ruditapes2_c1169 -1.239 0.476 26.311 21.241 n n n ruditapes_c17525 -1.408 0.476 10.777 7.654 n n n ruditapes_c14419 -1.497 0.476 7.954 5.312 n n n ruditapes2_c2155 -1.647 0.476 5.439 3.303 n y n ruditapes_c20485 -1.691 0.476 4.966 2.936 n y n ruditapes2_c3205 -1.841 0.476 3.84 2.086 n y n ruditapes_c12106 -1.957 0.476 aldose 1-epimerase /// 0003824 // catalytic activity 3.279 1.675 n y n ruditapes2_c1534 3.597 0.476 0.343 1.234 n y n ruditapes_lrc23594 3.935 0.476 0.289 1.139 n y n ruditapes_c32794 4.947 0.476 0.193 0.956 n y n ruditapes_lrc31784 8.319 0.476 0.088 0.732 n y n ruditapes_c20220 8.544 0.476 0.085 0.725 n y n ruditapes_c4841 8.544 0.476 0.085 0.725 n y n ruditapes_c10519 -3.009 0.476 1.534 0.51 n y n ruditapes_c11083 ? 0.476 0 0.508 n y n ruditapes_c13474 ? 0.476 0 0.508 n y n ruditapes_c15821 ? 0.476 0 0.508 n y n ruditapes_c18225 ? 0.476 beta- -n- 0 0.508 n y n ruditapes_c18318 ? 0.476 0 0.507 n y n ruditapes_c29582 -3.058 0.476 1.507 0.493 n y n ruditapes_c4801 -6.115 0.476 transmembrane emp24 domain trafficking protein 2 /// 0016192 // vesicle-mediated transport /// 0015031 // protein transport /// 0005515 // protein binding /// 0016021 // integral to membrane /// 0030659 // cytoplasmic vesicle membrane 0.849 0.139 n y n ruditapes_lrc33151 -11.119 0.476 0.672 0.06 n y n ruditapes2_c2881 -17.79 0.476 0.604 0.034 n y n ruditapes_c3239 -? 0.476 0.508 0 n y n ruditapes_c6294 -? 0.476 0.507 0 n y n ruditapes_c1433 -1.271 0.477 21.113 16.615 n n n ruditapes_c4776 1.366 0.477 8.567 11.701 n n n ruditapes_c12886 1.381 0.477 7.99 11.03 n n n ruditapes_c28053 -1.496 0.477 7.932 5.304 n n n ruditapes_c15706 1.697 0.477 2.748 4.663 n y n ruditapes_c4054 -1.548 0.477 6.828 4.409 n y n ruditapes2_c3795 -1.634 0.477 novel protein 5.556 3.401 n y n ruditapes_c30114 1.902 0.477 1.773 3.373 n y n ruditapes_c8402 -1.693 0.477 4.922 2.907 n y n ruditapes_c24664 -1.779 0.477 4.217 2.371 n y n ruditapes_c26442 -1.8 0.477 4.062 2.256 n y n ruditapes_c38504 -1.936 0.477 mitochondrial 28s ribosomal protein s33 /// 0005763 // mitochondrial small ribosomal subunit /// 0003735 // structural constituent of ribosome 3.35 1.731 n y n ruditapes2_lrc3792 2.698 0.477 mitochondrial atpase 0.64 1.727 n y n ruditapes_c31048 3.148 0.477 0.451 1.42 n y n ruditapes_c11552 -2.165 0.477 2.599 1.2 n y n ruditapes_c29215 -2.446 0.477 2.068 0.845 n y n ruditapes_c29126 ? 0.477 0 0.506 n y n ruditapes_c19545 ? 0.477 0 0.505 n y n ruditapes_c7169 -3.177 0.477 1.431 0.45 n y n ruditapes2_c2681 -3.336 0.477 endonuclease reverse transcriptase 1.356 0.406 n y n ruditapes_lrc38251 -3.447 0.477 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 1.304 0.378 n y n ruditapes_c25372 -3.892 0.477 1.16 0.298 n y n ruditapes_c20560 -7.413 0.477 0.77 0.104 n y n ruditapes_c31248 -17.79 0.477 0.6 0.034 n y n ruditapes_c24384 -? 0.477 0.507 0 n y n ruditapes_c21947 -? 0.477 betaine-homocysteine methyltransferase /// 0008168 // methyltransferase activity 0.505 0 n y n ruditapes2_c2891 -1.211 0.478 32.418 26.767 n n n ruditapes_c6328 1.334 0.478 10.048 13.405 n n n ruditapes2_c4621 1.407 0.478 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 7.037 9.9 n n n ruditapes_c5013 -1.367 0.478 12.593 9.209 n n n ruditapes_lrc34491 1.561 0.478 hypothetical protein BRAFLDRAFT_124429 [Branchiostoma floridae] 3.975 6.204 n y n ruditapes_c4682 -1.576 0.478 6.335 4.019 n y n ruditapes2_c143 -1.639 0.478 thioredoxin domain containing 9 /// 0045454 // cell redox homeostasis /// 0005515 // protein binding 5.493 3.352 n y n ruditapes_c8124 -1.889 0.478 3.549 1.879 n y n ruditapes_c18677 -2.001 0.478 eukaryotic translation elongation factor 1 epsilon 1 "/// 0008285 // negative regulation of cell proliferation /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0005515 // protein binding /// 0043517 // positive regulation of DNA damage response, signal transduction by p53 class mediator" 3.075 1.536 n y n ruditapes2_c1039 -2.085 0.478 2.793 1.339 n y n ruditapes_c29638 -2.224 0.478 protein disulfide-isomerase like protein erp57 /// 0003824 // catalytic activity /// 0065007 // biological regulation /// 0009987 // cellular process /// 0044424 // intracellular part 2.452 1.102 n y n ruditapes_c9015 4.347 0.478 0.238 1.035 n y n ruditapes_c3934 -2.309 0.478 2.276 0.985 n y n ruditapes_c27699 -2.372 0.478 2.166 0.913 n y n ruditapes_c26396 8.544 0.478 mitochondrial 28s ribosomal protein s25 0.084 0.719 n y n ruditapes_c24514 -2.859 0.478 1.624 0.568 n y n ruditapes2_c36 ? 0.478 0 0.504 n y n ruditapes_c22497 ? 0.478 0 0.504 n y n ruditapes_c19562 ? 0.478 myc homolog 0 0.503 n y n ruditapes_c29085 ? 0.478 0 0.503 n y n ruditapes_c18099 ? 0.478 0 0.502 n y n ruditapes_c17283 -3.089 0.478 1.47 0.476 n y n ruditapes2_lrc4129 -4.225 0.478 atp synthase beta subunit "/// 0005524 // ATP binding /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 1.075 0.254 n y n ruditapes_c29688 -6.671 0.478 0.805 0.121 n y n ruditapes_c7722 -6.671 0.478 0.805 0.121 n y n ruditapes_c7978 -7.413 0.478 0.767 0.103 n y n ruditapes_c18935 -15.566 0.478 0.614 0.039 n y n ruditapes_c27293 -17.79 0.478 0.598 0.034 n y n ruditapes_c27937 -? 0.478 0.502 0 n y n ruditapes_c14323 -1.274 0.479 20.438 16.038 n n n ruditapes_c15254 1.317 0.479 10.998 14.484 n n n ruditapes_c22683 -1.371 0.479 12.362 9.017 n n n ruditapes_c14470 -1.435 0.479 9.608 6.697 n n n ruditapes_lrc18804 -1.458 0.479 8.891 6.099 n n n ruditapes2_c1903 -1.477 0.479 8.323 5.635 n n n ruditapes2_c1130 -1.538 0.479 6.963 4.528 n y n ruditapes_c25878 -1.675 0.479 survival of motor neuron-related-splicing factor 30 5.055 3.018 n y n ruditapes_c21136 -1.711 0.479 isoform cra_a 4.725 2.762 n y n ruditapes_lrc21007 -1.739 0.479 4.481 2.577 n y n ruditapes_c7858 -1.759 0.479 4.325 2.458 n y n ruditapes2_lrc5323 3.148 0.479 astacin-like squid metalloprotease type iii 0.447 1.406 n y n ruditapes2_c3692 -2.093 0.479 cub and zona pellucida-like domains 1 2.764 1.321 n y n ruditapes_c12735 -2.15 0.479 2.611 1.214 n y n ruditapes_c24175 5.396 0.479 0.165 0.892 n y n ruditapes_c7617 -2.747 0.479 upf0534 protein 1.706 0.621 n y n ruditapes_c27668 -2.908 0.479 1.582 0.544 n y n ruditapes_c9405 ? 0.479 flavin reductase 0 0.501 n y n ruditapes_c17145 -3.41 0.479 predicted protein [Nematostella vectensis] 1.307 0.383 n y n ruditapes_lrc34760 -3.892 0.479 1.147 0.295 n y n ruditapes_c28390 -4.448 0.479 1.028 0.231 n y n ruditapes_c24086 -4.818 0.479 0.968 0.201 n y n ruditapes_c20501 -6.671 0.479 0.799 0.12 n y n ruditapes_c20861 -8.895 0.479 0.71 0.08 n y n ruditapes_lrc10660 -? 0.479 kazal-type serine proteinase inhibitor 0.501 0 n y n ruditapes_c13347 -? 0.479 0.5 0 n y n ruditapes_c11800 -1.267 0.48 21.228 16.75 n n n ruditapes_c17843 -1.544 0.48 6.825 4.421 n y n ruditapes2_c5320 2.548 0.48 ribosomal protein l26e /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 0.728 1.856 n y n ruditapes_lrc15592 -1.893 0.48 3.502 1.851 n y n ruditapes_c9908 -2.109 0.48 dehydrogenase reductase (sdr family) member 10 /// 0055114 // oxidation reduction /// 0004303 // estradiol 17-beta-dehydrogenase activity /// 0020037 // heme binding /// 0004497 // monooxygenase activity /// 0005829 // cytosol /// 0006706 // steroid catabolic process /// 0009055 // electron carrier activity /// 0047045 // testosterone 17-beta-dehydrogenase (NADP+) activity 2.711 1.286 n y n ruditapes_c7588 -2.113 0.48 2.689 1.273 n y n ruditapes_c648 6.745 0.48 dihydropteridine reductase /// 0005488 // binding /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0.116 0.785 n y n ruditapes_c15480 -2.561 0.48 universal stress protein 1.895 0.74 n y n ruditapes_c24202 -3.079 0.48 1.463 0.475 n y n ruditapes_c9614 -3.079 0.48 1.463 0.475 n y n ruditapes_c2623 -3.15 0.48 1.423 0.452 n y n ruditapes_c16100 -3.421 0.48 1.3 0.38 n y n ruditapes_lrc13103 -8.895 0.48 0.707 0.079 n y n ruditapes_c20654 -10.007 0.48 0.678 0.068 n y n ruditapes_c37487 -1.252 0.481 cysteine- angiogenic 61 23.483 18.759 n n n ruditapes2_c145 -1.298 0.481 17.64 13.594 n n n ruditapes_c2898 -1.373 0.481 dynein heavy chain 12.156 8.853 n n n ruditapes_c18136 -1.407 0.481 10.558 7.506 n n n ruditapes_c29550 -1.43 0.481 9.715 6.796 n n n ruditapes_c21910 -1.459 0.481 8.762 6.007 n n n ruditapes_c25114 -1.853 0.481 3.688 1.99 n y n ruditapes_c16357 2.548 0.481 0.726 1.85 n y n ruditapes_c26003 -1.9 0.481 3.446 1.814 n y n ruditapes_c16397 -1.927 0.481 3.324 1.725 n y n ruditapes_c3841 -1.987 0.481 3.086 1.553 n y n ruditapes_lrc18668 -2.104 0.481 2.706 1.286 n y n ruditapes_c15503 -2.147 0.481 2.594 1.208 n y n ruditapes_c22510 -2.158 0.481 2.567 1.189 n y n ruditapes_c11816 -2.158 0.481 2.562 1.187 n y n ruditapes_c28872 -2.511 0.481 kti12 chromatin associated 1.943 0.774 n y n ruditapes2_c2386 ? 0.481 0 0.497 n y n ruditapes_s39502 ? 0.481 0 0.497 n y n ruditapes_lrc35018 -3.639 0.481 mitochondrial atp synthase b chain /// 0015078 // hydrogen ion transmembrane transporter activity 1.215 0.334 n y n ruditapes_c7054 -4.186 0.481 tena thi-4 protein 1.07 0.256 n y n ruditapes_c16315 -6.115 0.481 0.829 0.136 n y n ruditapes_c18399 -10.007 0.481 0.675 0.067 n y n ruditapes_c26638 -15.566 0.481 0.605 0.039 n y n ruditapes_c14448 -? 0.481 neuronal calcium sensor ncs1-like protein 0.497 0 n y n ruditapes_c1286 -? 0.481 0.496 0 n y n ruditapes_c22276 -1.237 0.482 25.923 20.949 n n n ruditapes2_c3535 1.337 0.482 9.72 12.994 n n n ruditapes_c22209 -1.343 0.482 13.81 10.28 n n n ruditapes_c16524 -1.431 0.482 9.614 6.72 n n n ruditapes_c28627 -1.469 0.482 8.432 5.74 n n n ruditapes_lrc15881 1.709 0.482 2.603 4.448 n y n ruditapes_c21502 -1.604 0.482 5.814 3.623 n y n ruditapes_lrc32968 -1.809 0.482 3.925 2.17 n y n ruditapes_c32637 2.586 0.482 alkaline phosphatase /// 0046872 // metal ion binding /// 0005886 // plasma membrane /// 0051384 // response to glucocorticoid stimulus /// 0005737 // cytoplasm /// 0004035 // alkaline phosphatase activity /// 0046677 // response to antibiotic 0.695 1.798 n y n ruditapes_c3140 -1.925 0.482 3.313 1.72 n y n ruditapes_c11612 3.298 0.482 serine protease /// 0008233 // peptidase activity 0.399 1.317 n y n ruditapes_c8876 -2.224 0.482 2.401 1.08 n y n ruditapes2_lrc4499 -2.747 0.482 histone h3 /// 0043229 // intracellular organelle 1.683 0.613 n y n ruditapes2_c1842 -2.891 0.482 pol-like protein 1.57 0.543 n y n ruditapes_c12794 ? 0.482 elastin microfibril interfacer 2 /// 0005576 // extracellular region 0 0.495 n y n ruditapes_c12511 ? 0.482 0 0.494 n y n ruditapes_c16293 ? 0.482 0 0.494 n y n ruditapes2_c3742 -3.336 0.482 hypothetical protein TRIADDRAFT_55163 [Trichoplax adhaerens] 1.322 0.396 n y n ruditapes_c21423 -5.559 0.482 0.87 0.156 n y n ruditapes_c14417 -6.671 0.482 0.789 0.118 n y n ruditapes_c18035 -7.413 0.482 0.753 0.102 n y n ruditapes_c15874 -20.014 0.482 0.575 0.029 n y n ruditapes_s38588 -? 0.482 0.494 0 n y n ruditapes_c2320 1.29 0.483 12.743 16.435 n n n ruditapes_c14925 -1.333 0.483 14.452 10.839 n n n ruditapes_c31605 -1.365 0.483 12.455 9.123 n n n ruditapes_c13539 -1.506 0.483 7.496 4.978 n y n ruditapes_c9028 -1.592 0.483 5.947 3.735 n y n ruditapes_c23230 -1.661 0.483 5.108 3.075 n y n ruditapes_lrc24336 -1.674 0.483 4.98 2.975 n y n ruditapes_c31451 -1.771 0.483 4.158 2.348 n y n ruditapes_c30275 -1.865 0.483 3.593 1.927 n y n ruditapes_c25337 -1.959 0.483 3.167 1.617 n y n ruditapes_s39208 -2.012 0.483 2.968 1.475 n y n ruditapes_c30791 -2.287 0.483 2.267 0.991 n y n ruditapes_c5486 4.722 0.483 0.202 0.953 n y n ruditapes_c6133 -2.891 0.483 1.568 0.542 n y n ruditapes_c25682 ? 0.483 39s ribosomal protein mitochondrial 0 0.493 n y n ruditapes_lrc31532 ? 0.483 0 0.493 n y n ruditapes_c21649 -3.953 0.483 1.112 0.281 n y n ruditapes_c29029 -5.718 0.483 0.852 0.149 n y n ruditapes_c15891 -13.343 0.483 0.619 0.046 n y n ruditapes_c19185 -? 0.483 0.493 0 n y n ruditapes2_c4281 1.107 0.484 alpha 3d /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 79.641 88.15 n n n ruditapes_c18196 1.332 0.484 9.89 13.172 n n n ruditapes_c3129 -1.361 0.484 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0006096 // glycolysis /// 0006098 // pentose-phosphate shunt /// 0006094 // gluconeogenesis 12.624 9.279 n n n ruditapes2_c154 -1.406 0.484 10.487 7.461 n n n ruditapes_c20982 -1.418 0.484 10.004 7.057 n n n ruditapes2_c905 -1.432 0.484 nadh dehydrogenase 1 alpha 19kda /// 0003954 // NADH dehydrogenase activity /// 0022900 // electron transport chain /// 0005743 // mitochondrial inner membrane 9.473 6.614 n n n ruditapes_c18443 -1.435 0.484 9.397 6.548 n n n ruditapes_c17984 1.531 0.484 4.269 6.535 n y n ruditapes_c17864 -1.711 0.484 4.602 2.69 n y n ruditapes_c7651 -1.747 0.484 conserved plasmodium protein 4.311 2.467 n y n ruditapes_c11264 -1.93 0.484 3.267 1.693 n y n ruditapes_c13049 2.998 0.484 0.485 1.455 n y n ruditapes_c18153 -2.085 0.484 2.726 1.308 n y n ruditapes_c20193 3.597 0.484 0.331 1.189 n y n ruditapes2_c1112 5.059 0.484 cg2811 cg2811-pa 0.179 0.908 n y n ruditapes_lrc34699 -2.753 0.484 nascent polypeptide-associated complex subunit alpha /// 0044424 // intracellular part 1.665 0.605 n y n ruditapes_c28732 -2.901 0.484 mical-like 2 /// 0005488 // binding /// 0044464 // cell part 1.553 0.535 n y n ruditapes_c38287 ? 0.484 0 0.491 n y n ruditapes_c22840 ? 0.484 fibrillin 2 0 0.49 n y n ruditapes2_c6773 -3.892 0.484 transmembrane protein 14c /// 0005739 // mitochondrion 1.126 0.289 n y n ruditapes_c3725 -6.671 0.484 lysozyme "/// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0008152 // metabolic process /// 0009987 // cellular process" 0.781 0.117 n y n ruditapes_c14067 -13.343 0.484 0.617 0.046 n y n ruditapes_c23685 -? 0.484 0.49 0 n y n ruditapes_c9413 -? 0.484 0.49 0 n y n ruditapes_c27631 -? 0.484 0.489 0 n y n ruditapes_c9459 -? 0.484 mitochondrial translation optimization 1 homolog isoform b /// 0050660 // FAD binding /// 0005739 // mitochondrion /// 0045333 // cellular respiration /// 0002098 // tRNA wobble uridine modification 0.489 0 n y n ruditapes2_c1332 -1.26 0.485 21.802 17.302 n n n ruditapes_c24362 -1.523 0.485 7.054 4.63 n y n ruditapes_c3034 -1.562 0.485 nadh dehydrogenase fe-s protein 7 "/// 0055114 // oxidation reduction /// 0002119 // nematode larval development /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0040018 // positive regulation of multicellular organism growth /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0010171 // body morphogenesis /// 0040035 // hermaphrodite genitalia development /// 0005506 // iron ion binding /// 0009792 // embryonic development ending in birth or egg hatching" 6.354 4.068 n y n ruditapes_c7883 1.988 0.485 1.466 2.915 n y n ruditapes_lrc35658 -1.772 0.485 60s ribosomal protein l13 /// 0051726 // regulation of cell cycle /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 4.109 2.319 n y n ruditapes_lrc26313 -1.834 0.485 3.716 2.027 n y n ruditapes_c28653 -1.951 0.485 3.159 1.619 n y n ruditapes_c12838 -2.076 0.485 2.739 1.32 n y n ruditapes_c14595 10.343 0.485 0.063 0.655 n y n ruditapes_lrc32956 11.692 0.485 0.054 0.632 n y n ruditapes2_lrc6140 -2.931 0.485 eukaryotic translation initiation factor 3 subunit 3 gamma /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0032403 // protein complex binding /// 0005829 // cytosol /// 0005792 // microsome 1.526 0.52 n y n ruditapes_c37018 ? 0.485 domain containing protein 0 0.487 n y n ruditapes_c23818 -3.25 0.485 1.342 0.413 n y n ruditapes_lrc13091 -3.892 0.485 1.119 0.287 n y n ruditapes_c2237 -4.448 0.485 serine peptidase inhibitor- with kunitz and wap domains 1 /// 0005576 // extracellular region /// 0001669 // acrosomal vesicle /// 0004867 // serine-type endopeptidase inhibitor activity 1 0.225 n y n ruditapes_c27218 -4.448 0.485 2og-fe oxygenase 1 0.225 n y n ruditapes_c27135 -6.671 0.485 0.78 0.117 n y n ruditapes2_c1358 -7.413 0.485 proline-rich transmembrane protein 1 0.743 0.1 n y n ruditapes_c11676 -10.007 0.485 0.664 0.066 n y n ruditapes_c7848 -10.007 0.485 0.662 0.066 n y n ruditapes_c20524 -? 0.485 0.489 0 n y n ruditapes_lrc12381 -1.256 0.486 ribosomal protein l9 /// 0030529 // ribonucleoprotein complex 22.366 17.815 n n n ruditapes2_c2736 -1.463 0.486 8.463 5.785 n n n ruditapes_c25814 -1.637 0.486 5.293 3.234 n y n ruditapes2_c240 -1.735 0.486 4.361 2.514 n y n ruditapes_c26824 -2.017 0.486 2.904 1.44 n y n ruditapes_c12064 3.084 0.486 dimeric dihydrodiol dehydrogenase /// 0003824 // catalytic activity 0.451 1.391 n y n ruditapes_c19777 -2.097 0.486 2.664 1.271 n y n ruditapes_lrc34474 -2.296 0.486 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 2.223 0.969 n y n ruditapes2_c2452 13.041 0.486 mgc108470 protein /// 0009987 // cellular process 0.047 0.612 n y n ruditapes2_c4784 ? 0.486 von willebrand factor c domain containing 2 0 0.485 n y n ruditapes_c18189 ? 0.486 0 0.485 n y n ruditapes_c26942 -4.448 0.486 0.994 0.223 n y n ruditapes_c634 -4.852 0.486 protein /// 0005488 // binding 0.933 0.192 n y n ruditapes_c813 -4.942 0.486 glutathione s-transferase 0.924 0.187 n y n ruditapes_c5796 -5.189 0.486 0.895 0.172 n y n ruditapes_c24299 -8.339 0.486 0.704 0.084 n y n ruditapes_c18913 -8.895 0.486 0.688 0.077 n y n ruditapes_c1253 -10.007 0.486 0.66 0.066 n y n ruditapes_c13249 -15.566 0.486 protein 0.591 0.038 n y n ruditapes_c15962 -? 0.486 0.486 0 n y n ruditapes2_c2567 -? 0.486 0.485 0 n y n ruditapes_lrc37056 -1.357 0.487 12.675 9.343 n n n ruditapes_c30123 -1.409 0.487 10.172 7.217 n n n ruditapes_lrc9598 1.502 0.487 4.649 6.98 n y n ruditapes_c33914 -1.487 0.487 7.815 5.256 n n n ruditapes_lrc36949 1.629 0.487 protein 3.125 5.09 n y n ruditapes_c39309 -1.603 0.487 cyclic amp-regulated protein /// 0003779 // actin binding /// 0005622 // intracellular /// 0019899 // enzyme binding 5.707 3.56 n y n ruditapes_lrc34809 2.563 0.487 mitochondrial 50s ribosomal protein 0.697 1.787 n y n ruditapes_c15904 -1.927 0.487 3.237 1.68 n y n ruditapes_lrc38327 -2.043 0.487 eukaryotic translation initiation factor 3 subunit 3 /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0005829 // cytosol /// 0005792 // microsome 2.804 1.372 n y n ruditapes2_lrc4256 -2.085 0.487 2.684 1.287 n y n ruditapes_c24757 -2.132 0.487 2.562 1.201 n y n ruditapes2_lrc4153 4.317 0.487 0.232 1 n y n ruditapes2_c2887 -2.351 0.487 2.112 0.898 n y n ruditapes_c25919 5.396 0.487 fyn oncogene related to yes /// 0050966 // detection of mechanical stimulus involved in sensory perception of pain /// 0006816 // calcium ion transport /// 0007612 // learning /// 0001948 // glycoprotein binding /// 0050798 // activated T cell proliferation /// 0030900 // forebrain development /// 0045471 // response to ethanol /// 0005768 // endosome /// 0042802 // identical protein binding /// 0005886 // plasma membrane /// 0018108 // peptidyl-tyrosine phosphorylation /// 0001764 // neuron migration /// 0004715 // non-membrane spanning protein tyrosine kinase activity /// 0005829 // cytosol /// 0005740 // mitochondrial envelope /// 0042552 // myelination /// 0050852 // T cell receptor signaling pathway /// 0007631 // feeding behavior /// 0035235 // ionotropic glutamate receptor signaling pathway /// 0046777 // protein amino acid autophosphorylation /// 0007243 // protein kinase cascade /// 0008360 // regulation of cell shape /// 0015631 // tubulin binding 0.159 0.859 n y n ruditapes_c10968 ? 0.487 phosphoinositide-3- class 3 /// 0005524 // ATP binding /// 0005942 // phosphoinositide 3-kinase complex /// 0050708 // regulation of protein secretion /// 0030145 // manganese ion binding /// 0006468 // protein amino acid phosphorylation /// 0051605 // protein maturation by peptide bond cleavage /// 0005515 // protein binding /// 0007032 // endosome organization /// 0043201 // response to leucine /// 0046854 // phosphoinositide phosphorylation /// 0004672 // protein kinase activity /// 0048015 // phosphoinositide-mediated signaling /// 0016303 // 1-phosphatidylinositol-3-kinase activity 0 0.484 n y n ruditapes_c12190 ? 0.487 swi snf matrix actin dependent regulator of subfamily member 1 isoform 1 /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0045090 // retroviral genome replication /// 0015074 // DNA integration /// 0016514 // SWI/SNF complex /// 0005515 // protein binding /// 0000228 // nuclear chromosome /// 0006338 // chromatin remodeling /// 0045786 // negative regulation of cell cycle /// 0044419 // interspecies interaction between organisms 0 0.484 n y n ruditapes_c22645 ? 0.487 0 0.484 n y n ruditapes_c30505 ? 0.487 0 0.484 n y n ruditapes_c19969 ? 0.487 stanniocalcin-like protein 0 0.482 n y n ruditapes_lrc16498 ? 0.487 0 0.482 n y n ruditapes_c8607 -3.27 0.487 1.319 0.403 n y n ruditapes_c12082 -3.421 0.487 1.259 0.368 n y n ruditapes_c2595 -3.763 0.487 1.145 0.304 n y n ruditapes_c15844 -4.892 0.487 dna polymerase gamma "/// 0006287 // base-excision repair, gap-filling /// 0004527 // exonuclease activity /// 0005760 // gamma DNA polymerase complex /// 0003676 // nucleic acid binding /// 0003887 // DNA-directed DNA polymerase activity /// 0007568 // aging /// 0042645 // mitochondrial nucleoid /// 0005743 // mitochondrial inner membrane /// 0006264 // mitochondrial DNA replication /// 0002020 // protease binding" 0.925 0.189 n y n ruditapes_c21249 -5.559 0.487 0.85 0.153 n y n ruditapes_c29372 -8.895 0.487 0.685 0.077 n y n ruditapes_c16062 -13.343 0.487 0.607 0.046 n y n ruditapes_c19030 -? 0.487 0.483 0 n y n ruditapes_lrc32775 1.163 0.488 alpha 2 isoform 2 "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 35.759 41.6 n n n ruditapes2_c802 -1.29 0.488 gelsolin 17.842 13.833 n n n ruditapes_c10281 -1.291 0.488 17.725 13.731 n n n ruditapes_c18089 1.349 0.488 8.875 11.972 n n n ruditapes_c17382 1.47 0.488 5.189 7.629 n n n ruditapes_c10564 -1.418 0.488 9.788 6.902 n n n ruditapes_c16300 -1.626 0.488 5.384 3.311 n y n ruditapes_lrc33550 -1.717 0.488 4.464 2.601 n y n ruditapes_c7213 -1.725 0.488 4.415 2.559 n y n ruditapes_lrc35075 2.226 0.488 1.019 2.267 n y n ruditapes_c28057 -1.819 0.488 3.752 2.062 n y n ruditapes_c25771 2.642 0.488 0.642 1.696 n y n ruditapes_c12880 3.148 0.488 0.428 1.346 n y n ruditapes_c11339 3.597 0.488 0.326 1.172 n y n ruditapes_c27603 3.597 0.488 0.324 1.167 n y n ruditapes_c23512 -2.224 0.488 2.335 1.05 n y n ruditapes_c11181 -2.282 0.488 signal cub egf-like 1 2.226 0.975 n y n ruditapes_lrc32691 4.497 0.488 nadh dehydrogenase iron-sulfur protein 5 0.215 0.967 n y n ruditapes_c19873 -2.446 0.488 1.962 0.802 n y n ruditapes_c12775 -2.616 0.488 1.763 0.674 n y n ruditapes_c17217 -2.809 0.488 1.587 0.565 n y n ruditapes_c29707 -2.859 0.488 1.555 0.544 n y n ruditapes2_c515 -2.891 0.488 c-type mannose-binding (agap005332-pa) 1.527 0.528 n y n ruditapes_c12843 -2.965 0.488 1.48 0.499 n y n ruditapes_c25774 ? 0.488 0 0.481 n y n ruditapes_c26323 ? 0.488 0 0.481 n y n ruditapes_c8559 ? 0.488 0 0.48 n y n ruditapes2_c1857 -3.336 0.488 1.288 0.386 n y n ruditapes_c12427 -3.706 0.488 1.155 0.312 n y n ruditapes_c13443 -3.953 0.488 1.086 0.275 n y n ruditapes_lrc18814 -5.559 0.488 0.847 0.152 n y n ruditapes_c7570 -8.895 0.488 0.68 0.076 n y n ruditapes2_c1699 -10.007 0.488 dopamine beta hydroxylase-like protein 0.654 0.065 n y n ruditapes_c14230 -? 0.488 0.48 0 n y n ruditapes2_lrc5113 1.111 0.489 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 72.829 80.881 n n n ruditapes2_c2662 -1.226 0.489 27.359 22.319 n n n ruditapes_c7189 -1.298 0.489 16.918 13.034 n n n ruditapes_lrc7675 -1.345 0.489 13.265 9.859 n n n ruditapes_c1880 1.51 0.489 eukaryotic translation elongation factor 2 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0040007 // growth /// 0002119 // nematode larval development /// 0042221 // response to chemical stimulus /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0040035 // hermaphrodite genitalia development /// 0009792 // embryonic development ending in birth or egg hatching 4.472 6.754 n y n ruditapes_c27768 -1.504 0.489 7.32 4.866 n y n ruditapes_c15589 -1.505 0.489 7.305 4.853 n y n ruditapes_c22852 -1.519 0.489 7.018 4.621 n y n ruditapes_c9859 -1.519 0.489 protein 7.011 4.615 n y n ruditapes2_c2454 -1.629 0.489 5.326 3.269 n y n ruditapes_c2377 -1.84 0.489 myospheroid 3.624 1.969 n y n ruditapes2_lrc4818 -1.866 0.489 3.48 1.864 n y n ruditapes2_c3273 -1.946 0.489 3.129 1.608 n y n ruditapes_c15977 -2.224 0.489 2.327 1.047 n y n ruditapes_c2752 -2.273 0.489 thioester-containing protein 2.233 0.982 n y n ruditapes_c26491 5.396 0.489 0.158 0.852 n y n ruditapes_c3870 5.396 0.489 0.157 0.85 n y n ruditapes_c38940 8.544 0.489 0.08 0.683 n y n ruditapes_lrc32967 8.994 0.489 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.075 0.672 n y n ruditapes_c14082 13.491 0.489 trafficking protein particle complex subunit 5 /// 0005488 // binding 0.044 0.6 n y n ruditapes_c29239 ? 0.489 0 0.479 n y n ruditapes2_c1827 -3.475 0.489 1.224 0.352 n y n ruditapes_c24567 -3.706 0.489 guanylate cyclase "/// 0005524 // ATP binding /// 0007242 // intracellular signaling cascade /// 0006182 // cGMP biosynthetic process /// 0006468 // protein amino acid phosphorylation /// 0005515 // protein binding /// 0007601 // visual perception /// 0050896 // response to stimulus /// 0004714 // transmembrane receptor protein tyrosine kinase activity /// 0016021 // integral to membrane /// 0004715 // non-membrane spanning protein tyrosine kinase activity /// 0004383 // guanylate cyclase activity /// 0008528 // peptide receptor activity, G-protein coupled" 1.152 0.311 n y n ruditapes_c27255 -4.448 0.489 0.982 0.221 n y n ruditapes_c13112 -5.003 0.489 0.901 0.18 n y n ruditapes_c35311 -8.895 0.489 0.677 0.076 n y n ruditapes_c1784 1.157 0.49 set translocation (myeloid leukemia-associated) /// 0048471 // perinuclear region of cytoplasm /// 0004864 // phosphoprotein phosphatase inhibitor activity /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0035067 // negative regulation of histone acetylation /// 0005783 // endoplasmic reticulum /// 0008601 // protein phosphatase type 2A regulator activity /// 0006260 // DNA replication /// 0006913 // nucleocytoplasmic transport /// 0042393 // histone binding 38.324 44.326 n n n ruditapes_lrc20396 -1.251 0.49 22.635 18.091 n n n ruditapes_c11698 -1.294 0.49 17.219 13.304 n n n ruditapes_c21175 -1.504 0.49 7.3 4.855 n y n ruditapes_lrc34390 -1.508 0.49 mitochondrial cytochrome c oxidase polypeptide vb 7.225 4.792 n y n ruditapes_c13389 -1.557 0.49 6.31 4.053 n y n ruditapes_c30990 -1.701 0.49 4.574 2.69 n y n ruditapes_c22628 2.158 0.49 1.105 2.386 n y n ruditapes_c30575 -1.771 0.49 4.014 2.266 n y n ruditapes_c9117 -1.971 0.49 3.022 1.533 n y n ruditapes_s37894 -2.007 0.49 2.884 1.437 n y n ruditapes_c3555 -2.012 0.49 2.874 1.429 n y n ruditapes_c21990 -2.048 0.49 2.756 1.346 n y n ruditapes_lrc37547 -2.062 0.49 ribosomal protein s3a /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0006413 // translational initiation /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0009790 // embryonic development 2.716 1.317 n y n ruditapes2_c2788 -2.09 0.49 proteasome subunit alpha type-2 2.628 1.257 n y n ruditapes2_c3573 -2.179 0.49 slit2 protein /// 0040011 // locomotion /// 0048513 // organ development /// 0007411 // axon guidance 2.415 1.108 n y n ruditapes_c25681 -2.181 0.49 hypothetical protein BRAFLDRAFT_69208 [Branchiostoma floridae] 2.403 1.102 n y n ruditapes_c17942 ? 0.49 0 0.477 n y n ruditapes_c25289 ? 0.49 0 0.477 n y n ruditapes_c27634 ? 0.49 estradiol 17 beta-dehydrogenase 8 0 0.477 n y n ruditapes_c22001 ? 0.49 0 0.476 n y n ruditapes_c24971 ? 0.49 0 0.476 n y n ruditapes_c3724 -3.336 0.49 1.273 0.382 n y n ruditapes_lrc35729 -4.765 0.49 0.928 0.195 n y n ruditapes_c18194 -15.566 0.49 0.58 0.037 n y n ruditapes_c25505 -? 0.49 0.477 0 n y n ruditapes_c19767 -? 0.49 0.476 0 n y n ruditapes_c22320 -1.208 0.491 atp synthase beta subunit "/// 0005524 // ATP binding /// 0005811 // lipid particle /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0005743 // mitochondrial inner membrane /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 31.514 26.094 n n n ruditapes2_c5469 -1.483 0.491 7.772 5.243 n n n ruditapes_c6321 -1.554 0.491 6.327 4.071 n y n ruditapes_lrc32951 1.911 0.491 ribosomal protein s3a /// 0043229 // intracellular organelle /// 0005737 // cytoplasm /// 0009987 // cellular process 1.632 3.119 n y n ruditapes_c11551 -1.703 0.491 4.527 2.658 n y n ruditapes2_c937 -1.743 0.491 4.202 2.411 n y n ruditapes_c24353 -1.897 0.491 3.3 1.74 n y n ruditapes_c10609 -1.912 0.491 3.233 1.691 n y n ruditapes_c28439 3.298 0.491 0.384 1.265 n y n ruditapes_c9197 3.373 0.491 0.365 1.232 n y n ruditapes_c21724 -2.303 0.491 2.151 0.934 n y n ruditapes_c35475 11.242 0.491 myosin heavy chain /// 0005524 // ATP binding /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0003779 // actin binding /// 0005863 // striated muscle thick filament 0.055 0.62 n y n ruditapes_lrc16722 -2.908 0.491 developmentally-regulated vdg3 1.499 0.515 n y n ruditapes2_lrc5447 -3.336 0.491 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 1.27 0.381 n y n ruditapes_c23732 -3.706 0.491 1.138 0.307 n y n ruditapes_c13465 -3.892 0.491 1.087 0.279 n y n ruditapes2_c808 -4.448 0.491 0.973 0.219 n y n ruditapes_c19382 -24.461 0.491 0.537 0.022 n y n ruditapes_c29134 -? 0.491 0.475 0 n y n ruditapes_c23898 -? 0.491 predicted protein [Nematostella vectensis] 0.474 0 n y n ruditapes_c7979 -? 0.491 0.473 0 n y n ruditapes_c7461 -1.494 0.492 aldehyde dehydrogenase 1 member a2 /// 0016491 // oxidoreductase activity /// 0048513 // organ development /// 0008152 // metabolic process /// 0009987 // cellular process 7.432 4.973 n n n ruditapes_c84 -1.511 0.492 mitochondrial ribosomal protein l41 7.093 4.694 n y n ruditapes2_lrc5825 1.787 0.492 protein /// 0046872 // metal ion binding /// 0008237 // metallopeptidase activity 2.081 3.717 n y n ruditapes_c9162 -1.588 0.492 5.758 3.625 n y n ruditapes_c27121 -1.654 0.492 4.987 3.016 n y n ruditapes_c29748 -1.701 0.492 4.519 2.657 n y n ruditapes2_c3486 2.187 0.492 mitochondrial ribosomal protein l16 /// 0044424 // intracellular part 1.051 2.298 n y n ruditapes_c29353 -1.962 0.492 3.02 1.539 n y n ruditapes_lrc34881 -2.043 0.492 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 2.739 1.341 n y n ruditapes_c8624 -2.085 0.492 2.619 1.256 n y n ruditapes_c18667 -2.158 0.492 2.436 1.129 n y n ruditapes2_c2616 -2.167 0.492 2.417 1.115 n y n ruditapes2_c2100 4.722 0.492 0.194 0.917 n y n ruditapes2_c2764 -2.363 0.492 2.05 0.868 n y n ruditapes_s39692 6.296 0.492 0.122 0.769 n y n ruditapes_c8023 -2.514 0.492 mitochondrial import inner membrane translocase subunit tim8 a /// 0046872 // metal ion binding /// 0016020 // membrane /// 0006626 // protein targeting to mitochondrion /// 0005740 // mitochondrial envelope 1.843 0.733 n y n ruditapes_c23139 -2.747 0.492 1.608 0.585 n y n ruditapes_c21347 -2.859 0.492 1.521 0.532 n y n ruditapes_c22548 ? 0.492 0 0.473 n y n ruditapes_c13768 ? 0.492 0 0.472 n y n ruditapes_c23237 -4.077 0.492 1.042 0.255 n y n ruditapes_s39063 -5.003 0.492 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.892 0.178 n y n ruditapes_c10557 -7.783 0.492 0.703 0.09 n y n ruditapes_c20004 -8.895 0.492 0.668 0.075 n y n ruditapes_s38266 -13.343 0.492 related to glyoxal oxidase precursor 0.593 0.044 n y n ruditapes_c13819 -15.566 0.492 0.576 0.037 n y n ruditapes_c30280 -? 0.492 0.471 0 n y n ruditapes_c22615 -1.275 0.493 19.067 14.956 n n n ruditapes_c14837 1.396 0.493 6.898 9.628 n n n ruditapes_c24313 -1.388 0.493 10.758 7.749 n n n ruditapes_c18521 -1.467 0.493 8.074 5.503 n n n ruditapes_c16138 -1.555 0.493 6.255 4.022 n y n ruditapes_c18269 -1.582 0.493 5.815 3.675 n y n ruditapes_c13727 -1.601 0.493 5.582 3.486 n y n ruditapes_c17457 1.921 0.493 1.586 3.047 n y n ruditapes2_c2658 -2.036 0.493 histidine ammonia-lyase /// 0006548 // histidine catabolic process /// 0009058 // biosynthetic process /// 0016211 // ammonia ligase activity /// 0005625 // soluble fraction /// 0004397 // histidine ammonia-lyase activity /// 0005829 // cytosol 2.76 1.355 n y n ruditapes_c11914 -2.057 0.493 2.693 1.309 n y n ruditapes_lrc34481 3.193 0.493 glutathione s-transferase 0.407 1.298 n y n ruditapes_c10472 -2.065 0.493 2.67 1.293 n y n ruditapes_lrc20859 -2.141 0.493 2.468 1.153 n y n ruditapes_c26906 -2.541 0.493 1.799 0.708 n y n ruditapes_c26344 8.094 0.493 0.085 0.685 n y n ruditapes_c11282 -2.692 0.493 cg2064- partial /// 0005783 // endoplasmic reticulum 1.652 0.614 n y n ruditapes_c16101 ? 0.493 0 0.47 n y n ruditapes_c16093 ? 0.493 tetraspanin [Heliocidaris tuberculata] 0 0.469 n y n ruditapes_c29065 -3.25 0.493 1.292 0.398 n y n ruditapes_c25110 -3.78 0.493 1.105 0.292 n y n ruditapes_c5270 -4.448 0.493 0.966 0.217 n y n ruditapes2_c3417 -4.448 0.493 0.965 0.217 n y n ruditapes_c19964 -4.448 0.493 0.963 0.216 n y n ruditapes_c18286 -4.892 0.493 0.901 0.184 n y n ruditapes_c25932 -4.892 0.493 0.899 0.184 n y n ruditapes_s37269 -4.892 0.493 0.899 0.184 n y n ruditapes_c27796 -5.782 0.493 rhodopsin-like orphan gpcr 0.808 0.14 n y n ruditapes_c28406 -8.895 0.493 0.667 0.075 n y n ruditapes_lrc24335 -? 0.493 0.471 0 n y n ruditapes_c26803 -? 0.493 0.469 0 n y n ruditapes_lrc32993 -? 0.493 caveolin 3 /// 0044425 // membrane part /// 0051239 // regulation of multicellular organismal process /// 0048856 // anatomical structure development /// 0007275 // multicellular organismal development /// 0044444 // cytoplasmic part /// 0016043 // cellular component organization /// 0005886 // plasma membrane /// 0003008 // system process /// 0048869 // cellular developmental process /// 0042592 // homeostatic process 0.469 0 n y n ruditapes2_lrc4062 -1.185 0.494 38.415 32.427 n n n ruditapes_c5709 -1.475 0.494 7.804 5.289 n n n ruditapes_c22617 1.949 0.494 1.504 2.931 n y n ruditapes_c12932 2.12 0.494 sumo1 activating enzyme subunit 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0004839 // ubiquitin activating enzyme activity /// 0046982 // protein heterodimerization activity /// 0016567 // protein ubiquitination /// 0008022 // protein C-terminus binding /// 0043008 // ATP-dependent protein binding /// 0008047 // enzyme activator activity /// 0016874 // ligase activity 1.142 2.422 n y n ruditapes_lrc18154 2.129 0.494 1.132 2.41 n y n ruditapes_lrc34279 -1.934 0.494 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.099 1.603 n y n ruditapes_c31830 -2.091 0.494 zinc finger protein 2.584 1.236 n y n ruditapes_lrc36194 -2.224 0.494 2.272 1.022 n y n ruditapes_lrc23619 -2.224 0.494 2.271 1.021 n y n ruditapes_c9716 5.171 0.494 0.165 0.853 n y n ruditapes_c26691 -2.718 0.494 1.623 0.597 n y n ruditapes_c11671 -2.817 0.494 1.541 0.547 n y n ruditapes_c20225 ? 0.494 0 0.468 n y n ruditapes_c23428 ? 0.494 polysaccharide lyase family 14 protein 0 0.468 n y n ruditapes_c22123 ? 0.494 h+ v1 subunit h "/// 0044444 // cytoplasmic part /// 0016887 // ATPase activity /// 0016820 // hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances /// 0015992 // proton transport /// 0065007 // biological regulation /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process /// 0051704 // multi-organism process" 0 0.467 n y n ruditapes_c25775 ? 0.494 0 0.467 n y n ruditapes2_c4788 -3.074 0.494 phosphonoacetaldehyde hydrolase /// 0003824 // catalytic activity 1.376 0.448 n y n ruditapes2_lrc6813 -4.225 0.494 atp h+ mitochondrial f0 subunit c (subunit 9) 1.001 0.237 n y n ruditapes_c9699 -4.448 0.494 0.96 0.216 n y n ruditapes_c27877 -4.818 0.494 0.906 0.188 n y n ruditapes_lrc33835 -5.083 0.494 0.874 0.172 n y n ruditapes_lrc28051 -6.671 0.494 0.747 0.112 n y n ruditapes_c16924 -8.895 0.494 b-cell cll lymphoma 3 0.662 0.074 n y n ruditapes_lrc33818 -17.79 0.494 0.555 0.031 n y n ruditapes_c15876 -20.014 0.494 apolipoprotein a1 a4 e domain-containing protein 0.546 0.027 n y n ruditapes_c12128 -? 0.494 0.467 0 n y n ruditapes_c12985 -1.285 0.495 17.82 13.872 n n n ruditapes_c4639 1.349 0.495 8.585 11.582 n n n ruditapes_c31523 1.377 0.495 7.483 10.305 n n n ruditapes_c16169 -1.44 0.495 8.784 6.102 n n n ruditapes_c13911 -1.508 0.495 7.044 4.671 n y n ruditapes_c25269 -1.635 0.495 5.1 3.119 n y n ruditapes_c16263 -1.643 0.495 5.024 3.058 n y n ruditapes_c12802 -1.664 0.495 4.818 2.896 n y n ruditapes_c8553 -1.87 0.495 novel protein 3.361 1.797 n y n ruditapes2_c4659 2.968 0.495 0.471 1.398 n y n ruditapes_c1366 -2.029 0.495 2.754 1.358 n y n ruditapes_c27832 3.223 0.495 0.394 1.27 n y n ruditapes_lrc32218 -2.109 0.495 2.526 1.198 n y n ruditapes_c15688 -2.16 0.495 2.401 1.112 n y n ruditapes_c8991 -2.335 0.495 2.065 0.884 n y n ruditapes_c35912 5.246 0.495 0.16 0.842 n y n ruditapes_c21668 -2.409 0.495 1.951 0.81 n y n ruditapes_c10784 -2.747 0.495 1.592 0.579 n y n ruditapes2_c3651 15.739 0.495 heat shock protein 0.036 0.564 n y n ruditapes_c15753 ? 0.495 predicted protein [Nematostella vectensis] 0 0.466 n y n ruditapes_c21118 ? 0.495 thioester-containing protein 0 0.466 n y n ruditapes_c12864 ? 0.495 0 0.465 n y n ruditapes_c19648 ? 0.495 0 0.465 n y n ruditapes_c17669 -4.892 0.495 0.892 0.182 n y n ruditapes_c17222 -6.301 0.495 0.764 0.121 n y n ruditapes_c23212 -13.343 0.495 0.586 0.044 n y n ruditapes_c17776 -? 0.495 0.466 0 n y n ruditapes_c20360 -? 0.495 0.466 0 n y n ruditapes_c13016 -? 0.495 isoform c 0.465 0 n y n ruditapes_c22409 -1.294 0.496 16.74 12.934 n n n ruditapes_lrc35486 -1.404 0.496 elongation factor 1-beta /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 9.995 7.121 n n n ruditapes_c15682 1.534 0.496 3.999 6.134 n y n ruditapes_lrc30577 1.543 0.496 elongation factor 2 /// 0040007 // growth /// 0002119 // nematode larval development /// 0042221 // response to chemical stimulus /// 0040035 // hermaphrodite genitalia development /// 0009792 // embryonic development ending in birth or egg hatching 3.874 5.978 n y n ruditapes2_c1449 -1.528 0.496 annexin a4 /// 0005856 // cytoskeleton /// 0005488 // binding /// 0006887 // exocytosis 6.622 4.334 n y n ruditapes_c3204 1.697 0.496 AF339450_1hillarin [Hirudo medicinalis] 2.508 4.257 n y n ruditapes_c26034 -1.621 0.496 5.243 3.234 n y n ruditapes_c3773 1.949 0.496 1.491 2.906 n y n ruditapes_c14929 -1.749 0.496 4.062 2.322 n y n ruditapes_c17363 -1.8 0.496 tetratricopeptide repeat domain 17 3.721 2.067 n y n ruditapes_c8931 -1.894 0.496 3.235 1.708 n y n ruditapes2_c2520 2.575 0.496 0.659 1.698 n y n ruditapes_c1906 4.497 0.496 0.207 0.932 n y n ruditapes_c14855 -2.446 0.496 1.895 0.775 n y n ruditapes_lrc36387 ? 0.496 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0 0.463 n y n ruditapes_c20074 -3.336 0.496 1.24 0.372 n y n ruditapes_c25894 -3.892 0.496 glyoxylate reductase hydroxypyruvate reductase /// 0030267 // glyoxylate reductase (NADP) activity /// 0031406 // carboxylic acid binding /// 0055114 // oxidation reduction /// 0043648 // dicarboxylic acid metabolic process /// 0016618 // hydroxypyruvate reductase activity /// 0008465 // glycerate dehydrogenase activity /// 0051287 // NAD or NADH binding /// 0005515 // protein binding /// 0007588 // excretion /// 0050661 // NADP or NADPH binding /// 0005829 // cytosol 1.065 0.274 n y n ruditapes_lrc13963 -3.892 0.496 1.061 0.273 n y n ruditapes_c10219 -4.2 0.496 gtp-binding protein rab2-like protein 0.995 0.237 n y n ruditapes_lrc27496 -4.448 0.496 0.951 0.214 n y n ruditapes_c24054 -5.189 0.496 0.854 0.165 n y n ruditapes_c13358 -6.115 0.496 0.774 0.127 n y n ruditapes_c16049 -6.671 0.496 0.742 0.111 n y n ruditapes_c25319 -6.671 0.496 0.741 0.111 n y n ruditapes_c15847 -8.895 0.496 0.656 0.074 n y n ruditapes_lrc35333 -12.231 0.496 0.595 0.049 n y n ruditapes_c26864 -15.566 0.496 0.564 0.036 n y n ruditapes_c20687 -? 0.496 0.463 0 n y n ruditapes_c24358 -1.244 0.497 23.01 18.5 n n n ruditapes_c22721 -1.66 0.497 4.805 2.894 n y n ruditapes_c21335 -1.675 0.497 4.644 2.772 n y n ruditapes_c22226 -1.726 0.497 protein /// 0050660 // FAD binding /// 0016491 // oxidoreductase activity 4.225 2.448 n y n ruditapes_c8781 -1.795 0.497 3.745 2.087 n y n ruditapes_c7685 -1.812 0.497 3.637 2.007 n y n ruditapes2_c3743 -1.819 0.497 3.602 1.98 n y n ruditapes2_c2951 -1.906 0.497 3.18 1.668 n y n ruditapes_c17881 -1.906 0.497 3.176 1.666 n y n ruditapes_c13253 -1.934 0.497 3.056 1.58 n y n ruditapes_s38993 -1.946 0.497 3.016 1.55 n y n ruditapes_c15196 2.923 0.497 0.484 1.416 n y n ruditapes_c14806 -2.001 0.497 2.814 1.406 n y n ruditapes_c27495 -2.061 0.497 sorbitol dehydrogenase /// 0003939 // L-iditol 2-dehydrogenase activity /// 0006060 // sorbitol metabolic process /// 0006970 // response to osmotic stress /// 0042493 // response to drug /// 0046688 // response to copper ion /// 0042802 // identical protein binding /// 0009725 // response to hormone stimulus /// 0031667 // response to nutrient levels /// 0005625 // soluble fraction /// 0008270 // zinc ion binding /// 0046686 // response to cadmium ion 2.631 1.276 n y n ruditapes_lrc23272 3.485 0.497 0.333 1.16 n y n ruditapes_c28545 3.71 0.497 0.293 1.088 n y n ruditapes_c25601 -2.641 0.497 1.667 0.631 n y n ruditapes2_c1637 -2.669 0.497 1.641 0.615 n y n ruditapes_c30910 -2.965 0.497 zinc finger protein 271 (zinc finger protein 7) (zinc finger protein znfphex133) (epstein-barr virus-induced zinc finger protein) (znf-eb) (ct-zfp48) (zinc finger protein dp) (znf-dp) 1.42 0.479 n y n ruditapes2_c2207 ? 0.497 0 0.462 n y n ruditapes_c17803 ? 0.497 0 0.462 n y n ruditapes_c30752 ? 0.497 0 0.462 n y n ruditapes_c21543 ? 0.497 0 0.461 n y n ruditapes_c26014 ? 0.497 0 0.461 n y n ruditapes_c14255 ? 0.497 nicotinic acetylcholine receptor subunit type g 0 0.46 n y n ruditapes_c21266 ? 0.497 0 0.46 n y n ruditapes_c14024 -3.113 0.497 1.336 0.429 n y n ruditapes_s33530 -3.212 0.497 ribosomal protein l7a 1.285 0.4 n y n ruditapes_c21176 -3.336 0.497 1.234 0.37 n y n ruditapes_c13688 -3.459 0.497 1.185 0.343 n y n ruditapes_c20208 -4.13 0.497 1.003 0.243 n y n ruditapes_lrc13448 -4.892 0.497 0.883 0.18 n y n ruditapes_c30630 -6.671 0.497 0.736 0.11 n y n ruditapes_c15703 -22.238 0.497 fibrinogen and fibronectin /// 0005102 // receptor binding /// 0007165 // signal transduction 0.529 0.024 n y n ruditapes_c19343 -? 0.497 0.462 0 n y n ruditapes_c7114 -? 0.497 iduronate 2-sulfatase /// 0005488 // binding /// 0008152 // metabolic process /// 0008484 // sulfuric ester hydrolase activity 0.462 0 n y n ruditapes2_c2810 -1.17 0.498 43.836 37.456 n n n ruditapes2_c694 -1.286 0.498 tyrosine recombinase 17.459 13.58 n n n ruditapes_c20726 1.372 0.498 7.527 10.33 n n n ruditapes_c13447 -1.383 0.498 10.748 7.772 n n n ruditapes_c10152 -1.406 0.498 9.809 6.978 n n n ruditapes_c11902 -1.432 0.498 8.904 6.217 n n n ruditapes_c12671 1.538 0.498 3.907 6.011 n y n ruditapes_lrc17522 -1.516 0.498 ribosomal protein l21 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation 6.794 4.483 n y n ruditapes_c13184 -1.577 0.498 glutamyl-trna subunit c homolog 5.775 3.662 n y n ruditapes2_c505 -1.591 0.498 thioredoxin-like protein 5.573 3.502 n y n ruditapes_c7301 -1.626 0.498 hypothetical protein BRAFLDRAFT_87756 [Branchiostoma floridae] 5.134 3.157 n y n ruditapes_c16591 -1.675 0.498 4.634 2.767 n y n ruditapes_c6265 -1.683 0.498 tetraspanin 4.554 2.705 n y n ruditapes_c28565 -1.718 0.498 4.261 2.48 n y n ruditapes_c10552 -1.94 0.498 3.024 1.559 n y n ruditapes_c8519 3.373 0.498 0.353 1.192 n y n ruditapes_c11607 3.597 0.498 0.311 1.119 n y n ruditapes_c3119 -2.162 0.498 2.363 1.093 n y n ruditapes_lrc21459 -2.426 0.498 1.902 0.784 n y n ruditapes_c9927 6.745 0.498 0.107 0.725 n y n ruditapes_lrc7282 -2.669 0.498 1.632 0.612 n y n ruditapes2_c1814 -2.747 0.498 muscleblind-like 1 isoform 3 "/// 0003725 // double-stranded RNA binding /// 0005634 // nucleus /// 0001701 // in utero embryonic development /// 0006376 // mRNA splice site selection /// 0030326 // embryonic limb morphogenesis /// 0005737 // cytoplasm /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome /// 0001751 // compound eye photoreceptor cell differentiation /// 0045445 // myoblast differentiation" 1.57 0.571 n y n ruditapes_c6026 -2.83 0.498 1.504 0.531 n y n ruditapes_c18323 -2.859 0.498 tripartite motif-containing 24 1.483 0.519 n y n ruditapes_c15094 ? 0.498 pe-pgrs family protein 0 0.458 n y n ruditapes_c5009 -3.336 0.498 1.229 0.368 n y n ruditapes_c14224 -3.812 0.498 1.073 0.281 n y n ruditapes_c22576 -4.13 0.498 1.001 0.242 n y n ruditapes_c28184 -4.448 0.498 0.943 0.212 n y n ruditapes_c11785 -5.083 0.498 0.858 0.169 n y n ruditapes_c20725 -6.671 0.498 0.734 0.11 n y n ruditapes_c15545 -8.895 0.498 0.65 0.073 n y n ruditapes_c14829 -? 0.498 0.459 0 n y n ruditapes2_c667 -1.175 0.499 chitin binding peritrophin- 41.597 35.404 n n n ruditapes_c10134 -1.255 0.499 dpy-30-like protein /// 0005634 // nucleus /// 0042802 // identical protein binding 21.169 16.872 n n n ruditapes_c8090 -1.309 0.499 15.26 11.662 n n n ruditapes_c14307 -1.385 0.499 10.617 7.665 n n n ruditapes_lrc36913 1.613 0.499 expressed hypothetical protein [Trichoplax adhaerens] 3.089 4.982 n y n ruditapes_c23260 -1.553 0.499 6.115 3.938 n y n ruditapes_c3248 1.768 0.499 2.099 3.711 n y n ruditapes_c9085 -1.578 0.499 5.746 3.642 n y n ruditapes_c20528 1.799 0.499 conserved hypothetical protein [Pediculus humanus corporis] 1.96 3.526 n y n ruditapes2_c1293 -1.617 0.499 5.22 3.227 n y n ruditapes_lrc35383 -1.627 0.499 60s ribosomal protein l23 /// 0005622 // intracellular 5.113 3.143 n y n ruditapes_c24444 -1.641 0.499 4.954 3.018 n y n ruditapes_c5407 -1.756 0.499 3.96 2.256 n y n ruditapes_c15640 2.283 0.499 vacuolar protein sorting 28 homolog ( cerevisiae) /// 0015031 // protein transport /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0005829 // cytosol /// 0031902 // late endosome membrane 0.898 2.051 n y n ruditapes_c24356 2.498 0.499 0.704 1.76 n y n ruditapes_c907 2.754 0.499 myosin heavy chain /// 0005488 // binding 0.551 1.517 n y n ruditapes_c10132 -1.959 0.499 methyltransferase like 2 /// 0008168 // methyltransferase activity 2.932 1.497 n y n ruditapes_c31285 -2.341 0.499 2.013 0.86 n y n ruditapes2_lrc6202 6.071 0.499 fkbp-type peptidyl-prolyl cis-trans isomerase fkh1 /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.125 0.76 n y n ruditapes2_lrc4042 -2.524 0.499 glutathione s-transferase 1.776 0.704 n y n ruditapes2_c2229 -2.611 0.499 complement component q subcomponent-like 4 1.678 0.643 n y n ruditapes_c12896 ? 0.499 atp synthase f0 subunit 6 /// 0044425 // membrane part /// 0005739 // mitochondrion /// 0015992 // proton transport 0 0.458 n y n ruditapes_c13980 -3.212 0.499 1.278 0.398 n y n ruditapes_c5210 -3.763 0.499 1.082 0.287 n y n ruditapes_lrc36892 -4.765 0.499 0.892 0.187 n y n ruditapes_c2133 -24.461 0.499 0.517 0.021 n y n ruditapes_c18707 -? 0.499 0.457 0 n y n ruditapes_c2357 1.263 0.5 14.016 17.705 n n n ruditapes2_c2868 -1.302 0.5 15.693 12.049 n n n ruditapes2_c75 1.397 0.5 hypothetical protein BRAFLDRAFT_277105 [Branchiostoma floridae] 6.663 9.308 n n n ruditapes_c8743 1.434 0.5 dnase domain containing 3 "/// 0005634 // nucleus /// 0016888 // endodeoxyribonuclease activity, producing 5'-phosphomonoesters" 5.666 8.124 n n n ruditapes_c4994 -1.39 0.5 agrin /// 0032501 // multicellular organismal process /// 0016043 // cellular component organization /// 0007154 // cell communication 10.365 7.458 n n n ruditapes2_lrc4187 1.473 0.5 translationally controlled tumor protein 4.85 7.146 n n n ruditapes_c10545 -1.413 0.5 9.436 6.676 n n n ruditapes_c16657 -1.417 0.5 9.305 6.565 n n n ruditapes_s40312 -1.453 0.5 mitochondrial cytochrome c oxidase subunit 5b isoform 1 8.191 5.637 n n n ruditapes2_c3016 -1.465 0.5 7.866 5.367 n n n ruditapes_c4616 -1.47 0.5 7.737 5.264 n n n ruditapes_c17709 -1.488 0.5 zinc finger protein 259 /// 0005634 // nucleus /// 0005488 // binding /// 0009987 // cellular process 7.301 4.907 n n n ruditapes_c1148 1.738 0.5 60 kda ss-a ro ribonucleoprotein /// 0040010 // positive regulation of growth rate /// 0003676 // nucleic acid binding 2.231 3.878 n y n ruditapes_lrc35522 -1.648 0.5 ef hand family protein 4.842 2.938 n y n ruditapes_c11549 1.941 0.5 1.484 2.88 n y n ruditapes_c30753 -1.727 0.5 4.16 2.409 n y n ruditapes_lrc36043 -1.9 0.5 3.162 1.664 n y n ruditapes_c3625 -2.224 0.5 2.209 0.994 n y n ruditapes2_lrc6338 7.645 0.5 nadh dehydrogenase 1 beta subcomplex 3 /// 0016491 // oxidoreductase activity 0.089 0.679 n y n ruditapes_c11557 ? 0.5 nucleolar protein no29 /// 0005654 // nucleoplasm /// 0009987 // cellular process 0 0.454 n y n ruditapes_c20610 -7.413 0.5 0.692 0.093 n y n ruditapes_c16079 -13.343 0.5 0.574 0.043 n y n ruditapes_c27967 -13.343 0.5 0.574 0.043 n y n ruditapes_c17452 -? 0.5 0.455 0 n y n ruditapes_c22234 -? 0.5 0.455 0 n y n ruditapes_c23584 -1.213 0.501 28.744 23.692 n n n ruditapes2_lrc4126 -1.379 0.501 10.765 7.806 n n n ruditapes2_c1910 1.691 0.501 2.497 4.222 n y n ruditapes_c31067 -1.572 0.501 GG18875 [Drosophila erecta] 5.76 3.664 n y n ruditapes_c10419 1.899 0.501 1.591 3.02 n y n ruditapes_c27374 -1.688 0.501 4.46 2.643 n y n ruditapes_c15965 -1.725 0.501 4.148 2.404 n y n ruditapes_c17614 2.371 0.501 sorbitol dehydrogenase /// 0003939 // L-iditol 2-dehydrogenase activity /// 0006060 // sorbitol metabolic process /// 0006970 // response to osmotic stress /// 0042493 // response to drug /// 0046688 // response to copper ion /// 0042802 // identical protein binding /// 0009725 // response to hormone stimulus /// 0031667 // response to nutrient levels /// 0005625 // soluble fraction /// 0019405 // alditol catabolic process /// 0008270 // zinc ion binding /// 0046686 // response to cadmium ion 0.8 1.898 n y n ruditapes_lrc32615 -1.927 0.501 3.028 1.571 n y n ruditapes_c18610 2.923 0.501 0.474 1.387 n y n ruditapes_c18986 -2.089 0.501 2.508 1.201 n y n ruditapes_c19633 3.485 0.501 0.326 1.135 n y n ruditapes_c30227 -2.224 0.501 2.2 0.99 n y n ruditapes_c18038 5.171 0.501 0.16 0.826 n y n ruditapes_c18326 -2.417 0.501 1.887 0.781 n y n ruditapes2_c2130 -2.462 0.501 hypothetical protein BRAFLDRAFT_76555 [Branchiostoma floridae] 1.832 0.744 n y n ruditapes_c3170 -2.462 0.501 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 1.829 0.743 n y n ruditapes_c11125 -2.471 0.501 1.822 0.737 n y n ruditapes_c19241 8.544 0.501 0.076 0.646 n y n ruditapes_lrc18307 -2.616 0.501 1.66 0.635 n y n ruditapes_c23859 ? 0.501 0 0.454 n y n ruditapes_c25924 ? 0.501 0 0.454 n y n ruditapes_lrc33563 -3.212 0.501 cysteine-rich protein 1 /// 0008270 // zinc ion binding 1.265 0.394 n y n ruditapes_c24021 -3.336 0.501 1.211 0.363 n y n ruditapes_c28164 -4.448 0.501 0.929 0.209 n y n ruditapes_lrc38466 -5.559 0.501 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 0.799 0.144 n y n ruditapes_c29416 -6.671 0.501 0.724 0.108 n y n ruditapes_c15567 -6.671 0.501 0.722 0.108 n y n ruditapes_c21240 -6.671 0.501 0.722 0.108 n y n ruditapes_c9126 -? 0.501 0.453 0 n y n ruditapes_lrc32399 -1.094 0.502 40s ribosomal protein s27 /// 0006414 // translational elongation /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0005515 // protein binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 136.876 125.117 n n n ruditapes_c10977 -1.253 0.502 21.074 16.814 n n n ruditapes_c19680 -1.373 0.502 11.002 8.013 n n n ruditapes_c27206 -1.574 0.502 5.697 3.618 n y n ruditapes_c3838 -1.588 0.502 5.505 3.466 n y n ruditapes_c22677 -1.613 0.502 5.208 3.229 n y n ruditapes_lrc33510 1.868 0.502 1.681 3.141 n y n ruditapes_c8877 2.035 0.502 1.256 2.557 n y n ruditapes_lrc31838 2.211 0.502 actin /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0007605 // sensory perception of sound /// 0042802 // identical protein binding /// 0035267 // NuA4 histone acetyltransferase complex /// 0005625 // soluble fraction /// 0050998 // nitric-oxide synthase binding /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0006928 // cell motion /// 0030863 // cortical cytoskeleton 0.973 2.151 n y n ruditapes_c17561 2.498 0.502 0.694 1.735 n y n ruditapes_c20270 2.529 0.502 flotillin isoform d /// 0005198 // structural molecule activity /// 0016600 // flotillin complex 0.671 1.698 n y n ruditapes_c944 -1.885 0.502 3.189 1.691 n y n ruditapes_c29527 2.698 0.502 0.572 1.544 n y n ruditapes_c16124 -2.224 0.502 2.188 0.984 n y n ruditapes2_lrc6379 5.396 0.502 calponin transgelin 0.149 0.802 n y n ruditapes2_lrc2117 10.792 0.502 metallothionein /// 0046872 // metal ion binding 0.055 0.596 n y n ruditapes_c29486 -2.687 0.502 1.587 0.59 n y n ruditapes_c23985 -2.965 0.502 1.385 0.467 n y n ruditapes2_c5341 ? 0.502 histidine triad nucleotide binding protein 1 0 0.451 n y n ruditapes_c22238 ? 0.502 0 0.451 n y n ruditapes_c4797 ? 0.502 0 0.451 n y n ruditapes_c22541 ? 0.502 0 0.45 n y n ruditapes_c24127 ? 0.502 0 0.45 n y n ruditapes_c7971 ? 0.502 0 0.45 n y n ruditapes_c14033 -3.494 0.502 1.146 0.328 n y n ruditapes2_c2395 -6.301 0.502 hypothetical protein [Meretrix lusoria] 0.74 0.117 n y n ruditapes_c13880 -15.566 0.502 0.549 0.035 n y n ruditapes_c17799 -15.566 0.502 0.549 0.035 n y n ruditapes_c10222 -15.566 0.502 0.548 0.035 n y n ruditapes_c24201 -20.014 0.502 0.526 0.026 n y n ruditapes_c29805 -? 0.502 0.451 0 n y n ruditapes_c22101 -? 0.502 0.45 0 n y n ruditapes_c25497 -1.383 0.503 10.48 7.576 n n n ruditapes2_c6479 -1.472 0.503 7.562 5.136 n n n ruditapes_c14834 -1.522 0.503 6.501 4.27 n y n ruditapes_c23717 1.816 0.503 1.853 3.366 n y n ruditapes_c14115 -1.6 0.503 5.33 3.331 n y n ruditapes_c27778 -1.6 0.503 5.324 3.327 n y n ruditapes_c25994 1.949 0.503 1.444 2.814 n y n ruditapes_c16822 -1.831 0.503 3.442 1.879 n y n ruditapes_c17700 -1.846 0.503 3.355 1.817 n y n ruditapes_c17612 2.428 0.503 0.743 1.805 n y n ruditapes2_c2771 -1.863 0.503 3.284 1.763 n y n ruditapes_c20530 3.058 0.503 ekn1 /// 0005488 // binding 0.426 1.303 n y n ruditapes_c7343 -2.104 0.503 2.445 1.162 n y n ruditapes_c9103 3.897 0.503 0.26 1.014 n y n ruditapes2_c2225 3.935 0.503 protein phosphatase regulatory subunit b epsilon isoform /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0008601 // protein phosphatase type 2A regulator activity 0.255 1.004 n y n ruditapes2_c2557 -2.224 0.503 nicotinic acetylcholine receptor subunit type g 2.179 0.98 n y n ruditapes2_lrc4971 -2.224 0.503 2.176 0.978 n y n ruditapes2_c2610 -2.296 0.503 amyloid precursor protein /// 0046914 // transition metal ion binding /// 0044267 // cellular protein metabolic process /// 0034961 // cellular biopolymer biosynthetic process /// 0007409 // axonogenesis /// 0005576 // extracellular region /// 0006810 // transport /// 0033130 // acetylcholine receptor binding /// 0007166 // cell surface receptor linked signal transduction /// 0005794 // Golgi apparatus /// 0040007 // growth /// 0010556 // regulation of macromolecule biosynthetic process /// 0006878 // cellular copper ion homeostasis /// 0051705 // behavioral interaction between organisms /// 0042802 // identical protein binding /// 0000278 // mitotic cell cycle /// 0004867 // serine-type endopeptidase inhibitor activity /// 0010468 // regulation of gene expression /// 0048522 // positive regulation of cellular process /// 0043062 // extracellular structure organization /// 0050905 // neuromuscular process /// 0048513 // organ development /// 0031093 // platelet alpha granule lumen /// 0042995 // cell projection /// 0009986 // cell surface /// 0016070 // RNA metabolic process /// 0005887 // integral to plasma membrane /// 0031326 // regulation of cellular biosynthetic process /// 0044430 // cytoskeletal part /// 0008219 // cell death 2.052 0.894 n y n ruditapes_c1619 -2.426 0.503 1.859 0.766 n y n ruditapes_c23444 6.745 0.503 0.105 0.707 n y n ruditapes_c24711 -2.575 0.503 1.687 0.655 n y n ruditapes_c27011 -2.78 0.503 1.502 0.54 n y n ruditapes_c26669 ? 0.503 alcohol dehydrogenase class 3 /// 0004552 // octanol dehydrogenase activity /// 0046872 // metal ion binding /// 0004022 // alcohol dehydrogenase (NAD) activity /// 0006066 // alcohol metabolic process 0 0.45 n y n ruditapes_c13194 ? 0.503 0 0.449 n y n ruditapes_c26081 ? 0.503 hexokinase a 0 0.448 n y n ruditapes_c9134 -3.032 0.503 1.341 0.442 n y n ruditapes_lrc13740 -3.079 0.503 1.315 0.427 n y n ruditapes_c31424 -3.212 0.503 1.253 0.39 n y n ruditapes_c27595 -8.895 0.503 0.637 0.072 n y n ruditapes_c23707 -15.566 0.503 0.547 0.035 n y n ruditapes_c21774 -15.566 0.503 hypothetical protein BRAFLDRAFT_251617 [Branchiostoma floridae] 0.546 0.035 n y n ruditapes_c28081 -? 0.503 0.449 0 n y n ruditapes_c17230 -? 0.503 0.448 0 n y n ruditapes_c2905 -1.183 0.504 37.244 31.473 n n n ruditapes2_c3813 1.199 0.504 myosin heavy chain 23.139 27.734 n n n ruditapes_c8367 -1.368 0.504 11.142 8.146 n n n ruditapes2_c1250 1.539 0.504 3.78 5.819 n y n ruditapes_c15785 -1.479 0.504 7.406 5.008 n n n ruditapes_c18823 1.69 0.504 2.466 4.168 n y n ruditapes_c31549 -1.579 0.504 5.576 3.532 n y n ruditapes_c7552 -1.608 0.504 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 5.214 3.243 n y n ruditapes_c15059 -1.742 0.504 3.963 2.276 n y n ruditapes_c23700 -1.757 0.504 3.859 2.196 n y n ruditapes2_c1466 2.248 0.504 0.915 2.058 n y n ruditapes_c7277 -2.375 0.504 asparaginyl-trna synthetase /// 0005488 // binding /// 0004812 // aminoacyl-tRNA ligase activity /// 0006418 // tRNA aminoacylation for protein translation 1.915 0.806 n y n ruditapes_c19932 -2.669 0.504 1.591 0.596 n y n ruditapes_c15899 ? 0.504 0 0.447 n y n ruditapes_c19905 ? 0.504 0 0.447 n y n ruditapes_c29629 ? 0.504 0 0.447 n y n ruditapes_c26227 -3.706 0.504 1.074 0.29 n y n ruditapes_c13265 -4.448 0.504 0.915 0.206 n y n ruditapes_c12370 -5.337 0.504 histone deacetylase /// 0016787 // hydrolase activity 0.807 0.151 n y n ruditapes_c23265 -8.895 0.504 0.631 0.071 n y n ruditapes_c10296 -? 0.504 0.447 0 n y n ruditapes_c17055 -? 0.504 0.446 0 n y n ruditapes2_c2463 -1.425 0.505 8.841 6.204 n n n ruditapes_c24221 -1.466 0.505 7.653 5.219 n n n ruditapes_c13807 1.799 0.505 1.91 3.436 n y n ruditapes_c17762 2.441 0.505 sam domain- and hd domain-containing protein 1 /// 0005634 // nucleus 0.726 1.771 n y n ruditapes_c16711 2.748 0.505 0.538 1.48 n y n ruditapes2_lrc4110 -2.148 0.505 histone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0001740 // Barr body /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0010171 // body morphogenesis /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape /// 0009792 // embryonic development ending in birth or egg hatching /// 0000786 // nucleosome 2.316 1.078 n y n ruditapes_c8779 -2.224 0.505 serine protease /// 0008236 // serine-type peptidase activity 2.162 0.972 n y n ruditapes_c9701 -2.309 0.505 2.011 0.871 n y n ruditapes_c14862 -2.919 0.505 1.398 0.479 n y n ruditapes_c16684 ? 0.505 0 0.445 n y n ruditapes_c25768 ? 0.505 protein tyrosine receptor o /// 0006470 // protein amino acid dephosphorylation /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity /// 0005887 // integral to plasma membrane 0 0.445 n y n ruditapes_s34982 ? 0.505 0 0.444 n y n ruditapes_c10441 -3.78 0.505 1.045 0.276 n y n ruditapes_c22006 -15.566 0.505 0.542 0.035 n y n ruditapes_c28054 -? 0.505 0.445 0 n y n ruditapes_c22941 1.146 0.506 40.526 46.435 n n n ruditapes_c4867 -1.188 0.506 35.208 29.637 n n n ruditapes2_c1958 -1.197 0.506 32.481 27.144 n n n ruditapes_c10036 -1.321 0.506 13.788 10.436 n n n ruditapes_c7258 -1.411 0.506 achain the angstrom structure of calmodulin rs20 peptide complex 9.257 6.558 n n n ruditapes_c19497 -1.432 0.506 8.568 5.981 n n n ruditapes_c19838 -1.435 0.506 8.464 5.897 n n n ruditapes_lrc35336 -1.683 0.506 4.401 2.615 n y n ruditapes2_c2222 -1.682 0.506 4.391 2.611 n y n ruditapes_c9726 -1.839 0.506 3.345 1.819 n y n ruditapes_c29270 2.505 0.506 0.676 1.694 n y n ruditapes_c7765 -2.476 0.506 epidermal retinal dehydrogenase 2 1.773 0.716 n y n ruditapes_c18292 -2.541 0.506 immunity adhesion receptor cd209l2 /// 0005488 // binding /// 0009987 // cellular process /// 0044419 // interspecies interaction between organisms 1.695 0.667 n y n ruditapes_c16830 ? 0.506 0 0.443 n y n ruditapes_c20279 ? 0.506 0 0.443 n y n ruditapes_c29872 ? 0.506 0 0.442 n y n ruditapes2_c1047 -3.892 0.506 1.013 0.26 n y n ruditapes_c27453 -4.448 0.506 0.907 0.204 n y n ruditapes2_c518 -4.726 0.506 0.869 0.184 n y n ruditapes2_c98 -5.189 0.506 0.814 0.157 n y n ruditapes_c17366 -5.559 0.506 0.781 0.14 n y n ruditapes_c7888 -7.042 0.506 hemagglutinin amebocyte aggregation factor precursor 0.687 0.098 n y n ruditapes_c7188 -7.413 0.506 sulfotransferase member 2 0.674 0.091 n y n ruditapes_c22689 -7.783 0.506 0.66 0.085 n y n ruditapes2_c3240 -8.895 0.506 sialic acid binding lectin 0.627 0.071 n y n ruditapes2_lrc6516 -15.566 0.506 ef hand family protein 0.539 0.035 n y n ruditapes2_c271 -? 0.506 0.443 0 n y n ruditapes_c17172 -? 0.506 0.443 0 n y n ruditapes_c31889 -? 0.506 0.443 0 n y n ruditapes_c15751 -? 0.506 0.442 0 n y n ruditapes_c3797 -1.254 0.507 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 20.535 16.381 n n n ruditapes_c19781 -1.287 0.507 16.634 12.924 n n n ruditapes_lrc7195 -1.344 0.507 12.27 9.13 n n n ruditapes2_c2980 -1.349 0.507 11.942 8.85 n n n ruditapes_c30238 -1.428 0.507 8.652 6.057 n n n ruditapes2_c4850 1.688 0.507 cytochrome c oxidase subunit iv 2.431 4.105 n y n ruditapes_c22252 1.715 0.507 2.286 3.921 n y n ruditapes_c12703 -1.694 0.507 4.271 2.521 n y n ruditapes_c10720 -1.737 0.507 3.946 2.271 n y n ruditapes_c10532 -1.771 0.507 3.716 2.098 n y n ruditapes_c31869 2.548 0.507 0.643 1.638 n y n ruditapes_c13273 -2.076 0.507 2.469 1.189 n y n ruditapes_c26761 -2.471 0.507 1.767 0.715 n y n ruditapes_c6261 11.692 0.507 universal stress protein 0.049 0.569 n y n ruditapes_c29800 -2.707 0.507 lsm6 protein "/// 0008033 // tRNA processing /// 0005688 // U6 snRNP /// 0046982 // protein heterodimerization activity /// 0006402 // mRNA catabolic process /// 0006364 // rRNA processing /// 0005737 // cytoplasm /// 0003723 // RNA binding /// 0000398 // nuclear mRNA splicing, via spliceosome" 1.536 0.567 n y n ruditapes_c5582 ? 0.507 0 0.441 n y n ruditapes_c15351 ? 0.507 monocarboxylate transporter 0 0.44 n y n ruditapes_s35092 -3.614 0.507 1.084 0.3 n y n ruditapes_c8679 -4.448 0.507 0.904 0.203 n y n ruditapes2_lrc4189 -4.448 0.507 YGSC-1 [Lymnaea stagnalis] 0.902 0.203 n y n ruditapes_c17519 -5.559 0.507 0.776 0.14 n y n ruditapes_c19628 -8.895 0.507 0.622 0.07 n y n ruditapes_c25485 -? 0.507 0.441 0 n y n ruditapes_c13903 -? 0.507 0.44 0 n y n ruditapes_c24889 -1.256 0.508 20.155 16.05 n n n ruditapes_c20719 -1.566 0.508 ubiquitin-conjugating enzyme e2 i /// 0035207 // negative regulation of hemocyte proliferation /// 0019941 // modification-dependent protein catabolic process /// 0051246 // regulation of protein metabolic process /// 0005634 // nucleus /// 0043687 // post-translational protein modification /// 0019789 // SUMO ligase activity /// 0005515 // protein binding /// 0007352 // zygotic determination of dorsal/ventral axis /// 0006606 // protein import into nucleus /// 0006959 // humoral immune response /// 0035204 // negative regulation of lamellocyte differentiation /// 0016321 // female meiosis chromosome segregation /// 0045751 // negative regulation of Toll signaling pathway 5.654 3.611 n y n ruditapes_lrc35343 -1.772 0.508 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 3.697 2.086 n y n ruditapes_c23535 2.563 0.508 0.63 1.614 n y n ruditapes2_c1291 -1.906 0.508 intracellular family "/// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0008233 // peptidase activity" 3.013 1.581 n y n ruditapes_c30914 -2.224 0.508 2.131 0.958 n y n ruditapes_c23458 4.047 0.508 0.237 0.958 n y n ruditapes_c27307 -2.616 0.508 1.608 0.615 n y n ruditapes_c22942 ? 0.508 0 0.438 n y n ruditapes_lrc36584 ? 0.508 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0051082 // unfolded protein binding /// 0006457 // protein folding 0 0.438 n y n ruditapes_lrc33559 -3.235 0.508 macrophage migration inhibitory factor 2 1.213 0.375 n y n ruditapes_c12151 -3.336 0.508 1.172 0.351 n y n ruditapes_c19516 -3.459 0.508 solute carrier family anion member 2 (erythrocyte membrane protein band 3-like 1) /// 0005452 // inorganic anion exchanger activity /// 0005624 // membrane fraction /// 0016021 // integral to membrane /// 0006820 // anion transport 1.128 0.326 n y n ruditapes_c14109 -8.895 0.508 0.621 0.07 n y n ruditapes_c17492 -15.566 0.508 0.534 0.034 n y n ruditapes_c23543 -15.566 0.508 0.533 0.034 n y n ruditapes_c11659 -? 0.508 0.437 0 n y n ruditapes_c4016 -1.214 0.509 27.535 22.689 n n n ruditapes_c11152 -1.378 0.509 10.412 7.557 n n n ruditapes_c27884 -1.397 0.509 9.613 6.88 n n n ruditapes_c14098 -1.413 0.509 9.079 6.425 n n n ruditapes_c10362 -1.421 0.509 8.774 6.173 n n n ruditapes2_c450 -1.436 0.509 serine proteases and ovochymase regions /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0007596 // blood coagulation /// 0008233 // peptidase activity /// 0044464 // cell part 8.332 5.804 n n n ruditapes_c35090 1.557 0.509 26s protease regulatory subunit 6b /// 0005524 // ATP binding /// 0005634 // nucleus /// 0006508 // proteolysis /// 0017111 // nucleoside-triphosphatase activity /// 0030163 // protein catabolic process /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle /// 0004175 // endopeptidase activity 3.486 5.43 n y n ruditapes_c3953 -1.467 0.509 7.492 5.107 n n n ruditapes2_c553 -1.533 0.509 6.152 4.012 n y n ruditapes_lrc35827 -1.64 0.509 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 4.744 2.892 n y n ruditapes_c4990 -1.639 0.509 4.741 2.892 n y n ruditapes_c8806 -1.685 0.509 4.309 2.558 n y n ruditapes_c10276 -1.701 0.509 isoform a 4.181 2.459 n y n ruditapes_c29981 -1.759 0.509 3.757 2.136 n y n ruditapes_c19839 3.26 0.509 0.36 1.174 n y n ruditapes_c23329 -2.32 0.509 1.958 0.844 n y n ruditapes_c31014 -2.395 0.509 1.851 0.773 n y n ruditapes2_c2863 -2.464 0.509 1.757 0.713 n y n ruditapes_c16123 7.645 0.509 0.085 0.65 n y n ruditapes_lrc14694 -2.636 0.509 1.581 0.6 n y n ruditapes_c8912 -2.737 0.509 1.493 0.545 n y n ruditapes_c29881 -2.753 0.509 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation /// 0009312 // oligosaccharide biosynthetic process 1.482 0.538 n y n ruditapes_c26952 -2.891 0.509 1.389 0.48 n y n ruditapes_c13796 ? 0.509 fibrinogen and fibronectin 0 0.437 n y n ruditapes_c31051 ? 0.509 0 0.437 n y n ruditapes_c30115 ? 0.509 alpha amylase 2 0 0.436 n y n ruditapes_lrc36412 ? 0.509 nadh dehydrogenase iron-sulfur protein 5 0 0.435 n y n ruditapes_c29857 -3.336 0.509 1.165 0.349 n y n ruditapes_c12856 -4.13 0.509 0.95 0.23 n y n ruditapes_c31024 -7.227 0.509 0.67 0.093 n y n ruditapes2_c2014 -11.119 0.509 0.574 0.052 n y n ruditapes_c20058 -15.566 0.509 0.531 0.034 n y n ruditapes_c22272 -? 0.509 0.437 0 n y n ruditapes_c18817 -? 0.509 0.436 0 n y n ruditapes_c23777 -? 0.509 0.436 0 n y n ruditapes_lrc29554 -? 0.509 0.436 0 n y n ruditapes_c2790 -1.295 0.51 15.561 12.011 n n n ruditapes_c27803 1.409 0.51 6.024 8.487 n n n ruditapes_c15944 -1.615 0.51 4.977 3.082 n y n ruditapes_c30379 1.911 0.51 1.489 2.846 n y n ruditapes_c27341 2.214 0.51 0.932 2.063 n y n ruditapes_c28967 2.218 0.51 aldo keto reductase 0.926 2.055 n y n ruditapes_c14489 -1.827 0.51 3.345 1.831 n y n ruditapes_c26957 ? 0.51 0 0.435 n y n ruditapes_lrc32079 -3.058 0.51 kallikrein plasma (fletcher factor) 1 1.284 0.42 n y n ruditapes_c31180 -3.15 0.51 1.237 0.393 n y n ruditapes2_c362 -5.003 0.51 0.817 0.163 n y n ruditapes2_c2812 -5.337 0.51 0.785 0.147 n y n ruditapes_c28534 -7.413 0.51 0.66 0.089 n y n ruditapes_c17279 -8.895 0.51 0.615 0.069 n y n ruditapes_lrc36938 -? 0.51 0.435 0 n y n ruditapes_c6753 -? 0.51 0.433 0 n y n ruditapes_c29680 -1.471 0.511 7.335 4.987 n n n ruditapes2_lrc4555 1.606 0.511 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 2.983 4.79 n y n ruditapes_c7718 -1.548 0.511 5.843 3.774 n y n ruditapes_c25982 2.505 0.511 0.661 1.657 n y n ruditapes_c15783 -2.395 0.511 1.826 0.763 n y n ruditapes_c25905 -2.395 0.511 1.826 0.763 n y n ruditapes_c31186 -2.566 0.511 1.63 0.635 n y n ruditapes_s40099 ? 0.511 0 0.432 n y n ruditapes_c10306 ? 0.511 0 0.431 n y n ruditapes2_c2779 -3.032 0.511 pipecolic acid oxidase "/// 0016647 // oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor /// 0008152 // metabolic process /// 0005777 // peroxisome" 1.293 0.426 n y n ruditapes_c18220 -3.235 0.511 1.196 0.37 n y n ruditapes_c9334 -3.614 0.511 baculoviral iap repeat-containing 2 /// 0009987 // cellular process /// 0005622 // intracellular 1.061 0.294 n y n ruditapes_c4837 -5.559 0.511 heat shock protein 22 isoform 2 0.762 0.137 n y n ruditapes_c10093 -6.671 0.511 pol polyprotein 0.692 0.104 n y n ruditapes_lrc28826 -17.79 0.511 ccaat enhancer binding protein (c ebp) gamma /// 0016563 // transcription activator activity /// 0003700 // transcription factor activity /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0051091 // positive regulation of transcription factor activity /// 0045739 // positive regulation of DNA repair /// 0043353 // enucleate erythrocyte differentiation /// 0043565 // sequence-specific DNA binding /// 0016071 // mRNA metabolic process /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0030183 // B cell differentiation /// 0003690 // double-stranded DNA binding /// 0046982 // protein heterodimerization activity /// 0045078 // positive regulation of interferon-gamma biosynthetic process /// 0016564 // transcription repressor activity /// 0042267 // natural killer cell mediated cytotoxicity /// 0006338 // chromatin remodeling /// 0008134 // transcription factor binding /// 0043433 // negative regulation of transcription factor activity /// 0042803 // protein homodimerization activity 0.514 0.029 n y n ruditapes_c13920 -? 0.511 0.433 0 n y n ruditapes_c8996 -1.299 0.512 15.135 11.651 n n n ruditapes_lrc11310 1.358 0.512 7.596 10.314 n n n ruditapes_lrc20286 -1.328 0.512 13.019 9.806 n n n ruditapes2_lrc3670 -1.409 0.512 nadh dehydrogenase 1 beta subcomplex 3 9.056 6.427 n n n ruditapes2_c6057 1.511 0.512 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 4.017 6.068 n y n ruditapes_c28701 -1.456 0.512 7.67 5.268 n n n ruditapes_lrc6834 1.815 0.512 1.781 3.232 n y n ruditapes_c7504 -1.599 0.512 5.113 3.198 n y n ruditapes2_lrc4140 -1.681 0.512 4.283 2.548 n y n ruditapes_c12161 -1.712 0.512 novel carboxylesterase domain containing protein 4.025 2.351 n y n ruditapes_c8650 2.104 0.512 endo-beta- -glucanase "/// 0005975 // carbohydrate metabolic process /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds /// 0030247 // polysaccharide binding" 1.078 2.268 n y n ruditapes_c22035 -1.771 0.512 3.619 2.043 n y n ruditapes_lrc38355 -1.962 0.512 2.752 1.403 n y n ruditapes_c21288 3.26 0.512 complement component q subcomponent-like 4 0.356 1.16 n y n ruditapes_c28426 3.897 0.512 0.249 0.971 n y n ruditapes_c27606 -2.224 0.512 2.088 0.939 n y n ruditapes_c23133 -2.363 0.512 golgi-associated plant pathogenesis-related protein 1 1.868 0.791 n y n ruditapes_c21467 -2.458 0.512 1.743 0.709 n y n ruditapes_lrc36680 11.692 0.512 ribosomal protein l4 /// 0044444 // cytoplasmic part 0.048 0.556 n y n ruditapes_c26786 -2.926 0.512 1.348 0.461 n y n ruditapes_c6237 -2.965 0.512 1.322 0.446 n y n ruditapes_c25661 ? 0.512 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0 0.43 n y n ruditapes_lrc24940 ? 0.512 0 0.43 n y n ruditapes_c29336 ? 0.512 0 0.429 n y n ruditapes_c12033 -3.614 0.512 1.059 0.293 n y n ruditapes_lrc35410 -5.782 0.512 0.742 0.128 n y n ruditapes_c17229 -6.227 0.512 0.713 0.115 n y n ruditapes_c15433 -7.227 0.512 tumor necrosis factor-like protein 0.662 0.092 n y n ruditapes_c15241 -13.343 0.512 lipoxygenase homology domain-containing protein 1 0.541 0.041 n y n ruditapes_c29303 -13.343 0.512 0.54 0.04 n y n ruditapes_c22527 -15.566 0.512 0.522 0.034 n y n ruditapes_c28247 -? 0.512 0.431 0 n y n ruditapes_c10195 -? 0.512 0.43 0 n y n ruditapes_c16894 -? 0.512 0.43 0 n y n ruditapes_c7320 -1.402 0.513 9.273 6.615 n n n ruditapes2_c2157 -1.463 0.513 7.442 5.088 n n n ruditapes_c11253 1.919 0.513 serine protease inhibitor 2 1.453 2.787 n y n ruditapes2_c2575 2.491 0.513 0.665 1.656 n y n ruditapes_c7514 -1.99 0.513 2.645 1.329 n y n ruditapes_c12967 -2.224 0.513 calcium-dependent protein kinase 2.081 0.936 n y n ruditapes_c16567 -2.296 0.513 vacuolar protein sorting 11 /// 0005884 // actin filament /// 0005769 // early endosome /// 0015031 // protein transport /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0031902 // late endosome membrane /// 0008270 // zinc ion binding /// 0005765 // lysosomal membrane 1.957 0.853 n y n ruditapes2_c425 5.059 0.513 0.156 0.791 n y n ruditapes2_c1211 -2.372 0.513 1.84 0.776 n y n ruditapes_c13907 -2.446 0.513 1.747 0.714 n y n ruditapes_c16423 7.645 0.513 0.083 0.637 n y n ruditapes2_lrc4155 10.792 0.513 0.053 0.568 n y n ruditapes_c24291 -2.817 0.513 1.407 0.499 n y n ruditapes_c21236 ? 0.513 0 0.429 n y n ruditapes_c21946 ? 0.513 acetylcholinesterase /// 0004771 // sterol esterase activity /// 0044248 // cellular catabolic process /// 0065008 // regulation of biological quality /// 0005737 // cytoplasm /// 0003008 // system process /// 0016042 // lipid catabolic process 0 0.428 n y n ruditapes_c25643 ? 0.513 0 0.428 n y n ruditapes_c27765 -3.177 0.513 1.21 0.381 n y n ruditapes2_c2579 -3.224 0.513 1.188 0.368 n y n ruditapes_c14639 -3.494 0.513 1.09 0.312 n y n ruditapes_c22485 -3.614 0.513 1.052 0.291 n y n ruditapes_c25567 -4.448 0.513 0.879 0.198 n y n ruditapes_c6014 -13.343 0.513 0.539 0.04 n y n ruditapes_c19490 -? 0.513 0.428 0 n y n ruditapes_c18999 -? 0.513 0.427 0 n y n ruditapes_c30656 -1.256 0.514 19.567 15.582 n n n ruditapes_c11751 -1.293 0.514 15.527 12.009 n n n ruditapes_lrc32657 1.349 0.514 peritrophin a 7.864 10.608 n n n ruditapes_c17290 1.461 0.514 4.764 6.963 n n n ruditapes_c29333 -1.436 0.514 8.102 5.641 n n n ruditapes_c11729 -1.525 0.514 apextrin 6.133 4.021 n y n ruditapes_c3494 -1.608 0.514 4.979 3.097 n y n ruditapes_lrc16779 1.979 0.514 1.3 2.572 n y n ruditapes_c14526 -1.707 0.514 4.031 2.361 n y n ruditapes_c5621 -1.938 0.514 glutathione s-transferase mu 3 /// 0006805 // xenobiotic metabolic process 2.815 1.453 n y n ruditapes_c18841 -2.022 0.514 2.54 1.256 n y n ruditapes_c22236 -2.347 0.514 1.873 0.798 n y n ruditapes_c12989 -2.557 0.514 1.615 0.632 n y n ruditapes_c9393 -2.965 0.514 1.311 0.442 n y n ruditapes_lrc35558 -3.614 0.514 calcium-binding ef-hand-containing protein 1.05 0.29 n y n ruditapes_c5190 -5.559 0.514 0.75 0.135 n y n ruditapes_lrc36069 1.314 0.515 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 9.488 12.465 n n n ruditapes_c22514 1.43 0.515 5.387 7.701 n n n ruditapes_c5765 -1.391 0.515 galactoside- 3 /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 9.598 6.898 n n n ruditapes_lrc13191 -1.459 0.515 dynein light chain lc8-type 2 /// 0030286 // dynein complex /// 0002119 // nematode larval development /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007017 // microtubule-based process 7.467 5.118 n n n ruditapes_c20013 -1.476 0.515 7.065 4.786 n n n ruditapes_c780 -1.637 0.515 4.626 2.827 n y n ruditapes_c24778 -1.661 0.515 4.411 2.656 n y n ruditapes_c20985 -1.708 0.515 4.003 2.344 n y n ruditapes_c27590 -1.721 0.515 3.913 2.274 n y n ruditapes_lrc7776 2.458 0.515 0.682 1.676 n y n ruditapes_c4853 2.811 0.515 0.486 1.367 n y n ruditapes_c12316 2.968 0.515 0.429 1.273 n y n ruditapes_c1597 3.035 0.515 fermitin isoform a 0.408 1.238 n y n ruditapes2_c2811 3.597 0.515 0.287 1.032 n y n ruditapes_c4988 -2.162 0.515 morn repeat-containing protein c9orf18 homolog 2.183 1.01 n y n ruditapes2_lrc5615 5.171 0.515 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.149 0.772 n y n ruditapes_c7315 -2.527 0.515 sjchgc05781 protein 1.639 0.649 n y n ruditapes_c1603 8.094 0.515 mitochondrial ribosomal protein l17 /// 0005622 // intracellular 0.076 0.617 n y n ruditapes_c18874 10.343 0.515 myosin heavy chain 0.055 0.569 n y n ruditapes_lrc35603 ? 0.515 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0 0.425 n y n ruditapes_lrc33667 ? 0.515 0 0.424 n y n ruditapes_c19863 -4.077 0.515 0.933 0.229 n y n ruditapes_c17394 -4.892 0.515 0.811 0.166 n y n ruditapes_c11039 -5.083 0.515 0.791 0.156 n y n ruditapes_c4121 -5.559 0.515 0.746 0.134 n y n ruditapes_c6985 -5.93 0.515 0.719 0.121 n y n ruditapes2_c915 -6.671 0.515 0.679 0.102 n y n ruditapes_c29850 -6.671 0.515 0.677 0.101 n y n ruditapes_c10867 -20.014 0.515 0.493 0.025 n y n ruditapes_c25482 -22.238 0.515 0.486 0.022 n y n ruditapes_c26590 -? 0.515 0.424 0 n y n ruditapes_c8213 -? 0.515 0.423 0 n y n ruditapes_c9837 -? 0.515 0.423 0 n y n ruditapes_lrc32932 1.143 0.516 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 39.947 45.667 n n n ruditapes_c10380 -1.236 0.516 22.321 18.054 n n n ruditapes_c19666 -1.331 0.516 12.514 9.403 n n n ruditapes_c18981 1.535 0.516 3.63 5.571 n y n ruditapes_c4864 -1.471 0.516 7.163 4.871 n n n ruditapes2_c400 -1.487 0.516 heterogeneous nuclear ribonucleoprotein a3 6.795 4.569 n n n ruditapes_c20002 -1.625 0.516 4.742 2.918 n y n ruditapes_c26880 1.967 0.516 1.311 2.579 n y n ruditapes_c25230 1.995 0.516 1.25 2.494 n y n ruditapes_c28419 -1.917 0.516 2.866 1.495 n y n ruditapes_c22614 -2.038 0.516 2.467 1.21 n y n ruditapes_c15424 9.893 0.516 0.058 0.574 n y n ruditapes_c16165 ? 0.516 0 0.422 n y n ruditapes_c18331 ? 0.516 methyl binding protein 2 "/// 0031490 // chromatin DNA binding /// 0002087 // regulation of respiratory gaseous exchange by neurological system process /// 0045893 // positive regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0031061 // negative regulation of histone methylation /// 0003714 // transcription corepressor activity /// 0010385 // double-stranded methylated DNA binding /// 0008211 // glucocorticoid metabolic process /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0008327 // methyl-CpG binding /// 0006576 // biogenic amine metabolic process /// 0005739 // mitochondrion /// 0008284 // positive regulation of cell proliferation /// 0000400 // four-way junction DNA binding /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0005730 // nucleolus /// 0006342 // chromatin silencing /// 0060291 // long-term synaptic potentiation /// 0003729 // mRNA binding /// 0043234 // protein complex /// 0042551 // neuron maturation /// 0001666 // response to hypoxia /// 0021549 // cerebellum development /// 0021591 // ventricular system development /// 0006349 // genetic imprinting /// 0000790 // nuclear chromatin /// 0001662 // behavioral fear response /// 0050432 // catecholamine secretion /// 0001964 // startle response /// 0008104 // protein localization /// 0035067 // negative regulation of histone acetylation /// 0008542 // visual learning /// 0006541 // glutamine metabolic process /// 0005829 // cytosol /// 0035176 // social behavior /// 0051965 // positive regulation of synaptogenesis /// 0009405 // pathogenesis /// 0043524 // negative regulation of neuron apoptosis /// 0001976 // neurological system process involved in regulation of systemic arterial blood pressure /// 0060079 // regulation of excitatory postsynaptic membrane potential /// 0007616 // long-term memory /// 0045322 // unmethylated CpG binding /// 0009791 // post-embryonic development /// 0046470 // phosphatidylcholine metabolic process /// 0000792 // heterochromatin /// 0035197 // siRNA binding /// 0016358 // dendrite development /// 0019233 // sensory perception of pain /// 0019899 // enzyme binding /// 0008344 // adult locomotory behavior /// 0006020 // inositol metabolic process /// 0009790 // embryonic development /// 0032048 // cardiolipin metabolic process /// 0019230 // proprioception" 0 0.422 n y n ruditapes_c37586 ? 0.516 complement component q b chain /// 0043066 // negative regulation of apoptosis /// 0042742 // defense response to bacterium /// 0045930 // negative regulation of mitotic cell cycle /// 0048514 // blood vessel morphogenesis 0 0.422 n y n ruditapes_c11543 ? 0.516 0 0.421 n y n ruditapes_lrc16437 -3.071 0.516 1.241 0.404 n y n ruditapes_c30182 -3.78 0.516 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0.995 0.263 n y n ruditapes_c6954 -4.17 0.516 0.913 0.219 n y n ruditapes_c21062 -4.892 0.516 0.807 0.165 n y n ruditapes2_lrc1643 -5.559 0.516 0.743 0.134 n y n ruditapes_c28601 -7.413 0.516 0.642 0.087 n y n ruditapes_lrc34351 -13.343 0.516 developmentally-regulated vdg3 0.53 0.04 n y n ruditapes_c24465 -? 0.516 0.422 0 n y n ruditapes_c21736 -? 0.516 0.421 0 n y n ruditapes_lrc32082 -? 0.516 0.421 0 n y n ruditapes_c17953 1.337 0.517 8.26 11.044 n n n ruditapes_c2713 -1.354 0.517 11.2 8.274 n n n ruditapes2_c1749 -1.359 0.517 light tctex-type 1 /// 0005868 // cytoplasmic dynein complex /// 0005794 // Golgi apparatus /// 0005515 // protein binding /// 0005874 // microtubule /// 0005858 // axonemal dynein complex /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 10.916 8.034 n n n ruditapes_c18131 -1.382 0.517 9.866 7.138 n n n ruditapes_c24637 -1.447 0.517 7.713 5.331 n n n ruditapes_lrc30921 1.554 0.517 elongation factor-1 alpha /// 0006414 // translational elongation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005737 // cytoplasm /// 0003746 // translation elongation factor activity 3.395 5.277 n y n ruditapes_c36540 -1.45 0.517 proteasome subunit alpha type-3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 7.636 5.267 n n n ruditapes_c10941 -1.487 0.517 6.785 4.563 n n n ruditapes2_c1114 -1.513 0.517 inhibitor of apoptosis protein 1 6.249 4.129 n y n ruditapes_c29038 1.827 0.517 1.7 3.105 n y n ruditapes2_c232 -1.608 0.517 4.902 3.048 n y n ruditapes2_c847 -1.608 0.517 mitochondrial ribosomal protein l48 4.891 3.042 n y n ruditapes_c27918 -1.668 0.517 4.295 2.575 n y n ruditapes_lrc32190 -1.699 0.517 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0005739 // mitochondrion 4.032 2.373 n y n ruditapes_c23986 -1.739 0.517 c7orf63 protein 3.748 2.156 n y n ruditapes_c14778 -1.875 0.517 3.015 1.608 n y n ruditapes2_c1798 -1.97 0.517 2.66 1.35 n y n ruditapes2_c1587 -2.224 0.517 ecm 18 2.045 0.919 n y n ruditapes_c25595 -2.224 0.517 2.04 0.917 n y n ruditapes_c23632 -2.409 0.517 1.759 0.73 n y n ruditapes_c12541 7.645 0.517 0.082 0.626 n y n ruditapes_c29345 -2.566 0.517 1.585 0.618 n y n ruditapes_c25602 ? 0.517 0 0.421 n y n ruditapes_c31023 ? 0.517 0 0.421 n y n ruditapes_c31577 ? 0.517 0 0.421 n y n ruditapes_s37059 ? 0.517 nadh dehydrogenase 1 beta 8kda precursor 0 0.421 n y n ruditapes_c8167 ? 0.517 hypothetical protein BRAFLDRAFT_120398 [Branchiostoma floridae] 0 0.42 n y n ruditapes_c27564 ? 0.517 solute carrier family member 25 0 0.419 n y n ruditapes_c27833 ? 0.517 0 0.419 n y n ruditapes_c12927 -3.032 0.517 1.256 0.414 n y n ruditapes_c11566 -3.336 0.517 casein kinase delta /// 0005524 // ATP binding /// 0001948 // glycoprotein binding /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0042277 // peptide binding /// 0016055 // Wnt receptor signaling pathway /// 0005819 // spindle /// 0004674 // protein serine/threonine kinase activity /// 0006281 // DNA repair /// 0005625 // soluble fraction /// 0005813 // centrosome /// 0051219 // phosphoprotein binding 1.125 0.337 n y n ruditapes2_c1837 -3.336 0.517 1.123 0.337 n y n ruditapes_c31416 -3.639 0.517 1.024 0.281 n y n ruditapes_c23634 -4.892 0.517 0.804 0.164 n y n ruditapes_c19229 -12.231 0.517 0.539 0.044 n y n ruditapes_lrc37902 -13.343 0.517 0.529 0.04 n y n ruditapes_c21055 -15.566 0.517 0.511 0.033 n y n ruditapes_c13530 -17.79 0.517 complement component q subcomponent-like 4 0.499 0.028 n y n ruditapes_c29155 -17.79 0.517 0.498 0.028 n y n ruditapes_c7844 -? 0.517 0.419 0 n y n ruditapes_c13296 -1.257 0.518 19.024 15.133 n n n ruditapes_c27949 -1.339 0.518 11.943 8.919 n n n ruditapes_c13342 1.467 0.518 4.554 6.683 n n n ruditapes2_c2888 -1.496 0.518 6.542 4.372 n n n ruditapes_c26675 -1.595 0.518 5.032 3.154 n y n ruditapes2_c1633 -1.94 0.518 2.754 1.42 n y n ruditapes_c26008 -2.038 0.518 2.438 1.196 n y n ruditapes_c21484 3.148 0.518 0.372 1.172 n y n ruditapes_lrc33041 -2.059 0.518 lethal neo18 2.391 1.161 n y n ruditapes_c20071 7.645 0.518 0.082 0.624 n y n ruditapes2_lrc6090 -2.687 0.518 1.469 0.547 n y n ruditapes_c19787 ? 0.518 harbinger transposase derived 1 0 0.419 n y n ruditapes_c15222 ? 0.518 0 0.418 n y n ruditapes_c1541 ? 0.518 0 0.418 n y n ruditapes_c19390 ? 0.518 short-chain dehydrogenase 0 0.418 n y n ruditapes_c8938 -3.018 0.518 1.254 0.416 n y n ruditapes_c30891 -4.2 0.518 0.899 0.214 n y n ruditapes_c22239 -5.559 0.518 0.738 0.133 n y n ruditapes_c21497 -7.783 0.518 0.623 0.08 n y n ruditapes_c4356 -1.135 0.519 61.845 54.503 n n n ruditapes2_c1453 -1.137 0.519 60.265 53.012 n n n ruditapes_c25734 -1.192 0.519 31.874 26.736 n n n ruditapes_c2645 -1.192 0.519 31.824 26.69 n n n ruditapes_c11244 -1.321 0.519 13 9.841 n n n ruditapes2_c589 -1.386 0.519 proteasome 26s non-atpase subunit 7 9.595 6.922 n n n ruditapes_c17374 -1.487 0.519 CG41012 [Drosophila melanogaster] 6.701 4.505 n n n ruditapes_c30242 -1.668 0.519 4.261 2.555 n y n ruditapes2_c849 -1.982 0.519 2.59 1.307 n y n ruditapes_c21312 -2.015 0.519 2.499 1.24 n y n ruditapes2_c2440 -2.028 0.519 2.461 1.214 n y n ruditapes_c11257 3.148 0.519 hydroxysteroid (17-beta) dehydrogenase 8 /// 0005624 // membrane fraction /// 0004303 // estradiol 17-beta-dehydrogenase activity /// 0005886 // plasma membrane /// 0008210 // estrogen metabolic process /// 0005740 // mitochondrial envelope /// 0008134 // transcription factor binding /// 0008610 // lipid biosynthetic process /// 0008209 // androgen metabolic process /// 0050327 // testosterone 17-beta-dehydrogenase activity 0.37 1.165 n y n ruditapes2_c5834 -2.118 0.519 hypothetical protein BRAFLDRAFT_76402 [Branchiostoma floridae] 2.239 1.057 n y n ruditapes_c16762 -2.439 0.519 1.711 0.702 n y n ruditapes_c17407 7.645 0.519 0.081 0.62 n y n ruditapes_lrc23499 -2.669 0.519 1.478 0.554 n y n ruditapes_c16218 -2.919 0.519 1.305 0.447 n y n ruditapes_c16042 ? 0.519 0 0.416 n y n ruditapes_c22269 ? 0.519 0 0.416 n y n ruditapes_c8780 ? 0.519 alpha-amylase /// 0008152 // metabolic process /// 0016787 // hydrolase activity /// 0043167 // ion binding 0 0.415 n y n ruditapes_c11516 -3.558 0.519 cg15786 cg15786-pa 1.04 0.292 n y n ruditapes2_lrc5733 -3.812 0.519 PREDICTED: similar to GA20453-PA [Nasonia vitripennis] 0.973 0.255 n y n ruditapes_c25530 -3.892 0.519 0.954 0.245 n y n ruditapes_c30257 -4.003 0.519 0.93 0.232 n y n ruditapes_lrc33138 -9.636 0.519 ferritin /// 0055114 // oxidation reduction /// 0004322 // ferroxidase activity /// 0006826 // iron ion transport /// 0006879 // cellular iron ion homeostasis /// 0005737 // cytoplasm /// 0008199 // ferric iron binding 0.574 0.06 n y n ruditapes_c20009 -13.343 0.519 0.524 0.039 n y n ruditapes_c28794 -? 0.519 0.417 0 n y n ruditapes_c6491 -? 0.519 0.416 0 n y n ruditapes_s37940 -? 0.519 0.416 0 n y n ruditapes_c13763 -1.318 0.52 13.105 9.943 n n n ruditapes_c19837 -1.325 0.52 12.614 9.518 n n n ruditapes_c18005 -1.352 0.52 11.149 8.25 n n n ruditapes_c20969 -1.413 0.52 8.593 6.083 n n n ruditapes_c30355 -1.433 0.52 7.975 5.564 n n n ruditapes2_c1562 -1.497 0.52 6.462 4.315 n n n ruditapes_c27101 -1.554 0.52 5.51 3.546 n y n ruditapes_c14080 -1.606 0.52 4.85 3.02 n y n ruditapes_c11290 1.895 0.52 1.463 2.772 n y n ruditapes_c26642 -1.923 0.52 2.783 1.447 n y n ruditapes_c25288 -1.959 0.52 heparan sulfate 6-o-sulfotransferase 1 /// 0001890 // placenta development /// 0015012 // heparan sulfate proteoglycan biosynthetic process /// 0016020 // membrane /// 0001525 // angiogenesis /// 0048286 // lung alveolus development 2.652 1.354 n y n ruditapes_c25923 -2.089 0.52 2.291 1.097 n y n ruditapes_c11046 3.897 0.52 0.24 0.936 n y n ruditapes_c22680 4.272 0.52 rna binding motif protein 18 /// 0000166 // nucleotide binding /// 0003723 // RNA binding 0.202 0.865 n y n ruditapes_c28685 -2.325 0.52 ubx domain-containing /// 0008270 // zinc ion binding /// 0005622 // intracellular 1.853 0.797 n y n ruditapes_c16916 -2.395 0.52 1.755 0.733 n y n ruditapes_c29529 -2.878 0.52 1.325 0.46 n y n ruditapes_s39389 ? 0.52 cysteine and glycine-rich protein 3 /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0065008 // regulation of biological quality /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0007519 // skeletal muscle tissue development 0 0.415 n y n ruditapes_c13277 ? 0.52 0 0.414 n y n ruditapes_c5037 ? 0.52 0 0.414 n y n ruditapes_c10446 ? 0.52 muscle glycogen phosphorylase /// 0008144 // drug binding /// 0030170 // pyridoxal phosphate binding /// 0005529 // sugar binding /// 0006874 // cellular calcium ion homeostasis /// 0016208 // AMP binding /// 0001666 // response to hypoxia /// 0008184 // glycogen phosphorylase activity /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0051056 // regulation of small GTPase mediated signal transduction /// 0005980 // glycogen catabolic process /// 0008270 // zinc ion binding /// 0005085 // guanyl-nucleotide exchange factor activity /// 0005509 // calcium ion binding /// 0016529 // sarcoplasmic reticulum /// 0051591 // response to cAMP /// 0042803 // protein homodimerization activity 0 0.413 n y n ruditapes_c11198 -3.437 0.52 1.074 0.313 n y n ruditapes_c19126 -3.706 0.52 0.994 0.268 n y n ruditapes_c19048 -7.783 0.52 0.619 0.079 n y n ruditapes_c19049 -7.783 0.52 0.616 0.079 n y n ruditapes_c12990 -? 0.52 0.414 0 n y n ruditapes_c3387 -1.265 0.521 17.861 14.121 n n n ruditapes_c21415 1.341 0.521 7.906 10.603 n n n ruditapes_c11208 1.607 0.521 2.838 4.56 n y n ruditapes_c13402 1.607 0.521 dolichyl-diphosphooligosaccharide-protein glycosyltransferase /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0006496 // protein amino acid terminal N-glycosylation /// 0005515 // protein binding /// 0034097 // response to cytokine stimulus /// 0016021 // integral to membrane /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity /// 0005792 // microsome /// 0042110 // T cell activation 2.833 4.553 n y n ruditapes_c29782 -1.567 0.521 5.307 3.388 n y n ruditapes_c23067 1.822 0.521 1.679 3.06 n y n ruditapes_c14746 -1.606 0.521 4.831 3.008 n y n ruditapes2_c488 -1.609 0.521 4.787 2.975 n y n ruditapes_c1504 -1.622 0.521 4.644 2.864 n y n ruditapes_c26760 -1.751 0.521 3.611 2.062 n y n ruditapes_c7485 -1.764 0.521 3.514 1.993 n y n ruditapes_c18493 -1.853 0.521 3.051 1.646 n y n ruditapes2_c2751 -1.953 0.521 2.67 1.368 n y n ruditapes_c19116 -2.141 0.521 ubiquitin carboxyl-terminal esterase l3 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0007628 // adult walking behavior /// 0004221 // ubiquitin thiolesterase activity /// 0008234 // cysteine-type peptidase activity /// 0042755 // eating behavior /// 0005737 // cytoplasm 2.163 1.01 n y n ruditapes_c27887 -2.224 0.521 2.001 0.9 n y n ruditapes_c15300 4.722 0.521 tuftelin interacting protein 11 /// 0044428 // nuclear part /// 0005488 // binding /// 0009987 // cellular process 0.169 0.799 n y n ruditapes_c27166 4.947 0.521 0.157 0.774 n y n ruditapes_c20292 -2.347 0.521 1.813 0.772 n y n ruditapes_c27696 -2.471 0.521 1.657 0.67 n y n ruditapes_c1800 9.893 0.521 0.057 0.56 n y n ruditapes_c14982 ? 0.521 0 0.413 n y n ruditapes_c21285 ? 0.521 hypothetical protein BRAFLDRAFT_100109 [Branchiostoma floridae] 0 0.412 n y n ruditapes_c28567 ? 0.521 0 0.412 n y n ruditapes_lrc37147 ? 0.521 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0.412 n y n ruditapes_c31075 -3.235 0.521 1.141 0.353 n y n ruditapes_c4766 -3.614 0.521 1.015 0.281 n y n ruditapes_c14150 -4.448 0.521 endonuclease reverse transcriptase 0.846 0.19 n y n ruditapes_c22536 -4.448 0.521 0.845 0.19 n y n ruditapes_c8043 -? 0.521 0.412 0 n y n ruditapes_c9999 1.22 0.522 17.607 21.476 n n n ruditapes_c11249 1.297 0.522 10.142 13.152 n n n ruditapes_c15195 1.349 0.522 7.553 10.19 n n n ruditapes_c16530 -1.423 0.522 8.181 5.749 n n n ruditapes_c29234 -1.713 0.522 ubiquitin-protein ligase-like /// 0000003 // reproduction /// 0005515 // protein binding /// 0008270 // zinc ion binding /// 0009792 // embryonic development ending in birth or egg hatching 3.842 2.243 n y n ruditapes2_c344 -1.725 0.522 intracellular family 3.756 2.177 n y n ruditapes_lrc35065 -1.885 0.522 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 2.899 1.537 n y n ruditapes_c18182 -1.893 0.522 2.873 1.518 n y n ruditapes_c22437 3.058 0.522 0.39 1.192 n y n ruditapes2_c231 -2.156 0.522 2.12 0.983 n y n ruditapes_c31192 4.497 0.522 0.183 0.825 n y n ruditapes_c19926 -2.351 0.522 1.798 0.765 n y n ruditapes_lrc36926 5.846 0.522 transmembrane serine 2 0.119 0.696 n y n ruditapes_c25445 -2.566 0.522 1.546 0.603 n y n ruditapes_c12568 -2.669 0.522 1.461 0.547 n y n ruditapes_c28658 -2.919 0.522 1.284 0.44 n y n ruditapes_c10235 ? 0.522 0 0.411 n y n ruditapes_c30899 ? 0.522 0 0.411 n y n ruditapes_c31902 ? 0.522 0 0.411 n y n ruditapes2_c2534 ? 0.522 0 0.41 n y n ruditapes_c19865 ? 0.522 rhodopsin-like orphan gpcr 0 0.41 n y n ruditapes_c15957 ? 0.522 hypothetical protein TRIADDRAFT_54391 [Trichoplax adhaerens] 0 0.409 n y n ruditapes_c23184 ? 0.522 0 0.409 n y n ruditapes_lrc35536 ? 0.522 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 0 0.409 n y n ruditapes_lrc28436 -4.448 0.522 0.843 0.19 n y n ruditapes_c12560 -5.003 0.522 0.774 0.155 n y n ruditapes_c4998 -5.003 0.522 calmodulin /// 0017022 // myosin binding 0.772 0.154 n y n ruditapes_s32800 -6.671 0.522 0.656 0.098 n y n ruditapes_c14723 -6.671 0.522 0.654 0.098 n y n ruditapes_c10912 -15.566 0.522 0.499 0.032 n y n ruditapes_c27678 -15.566 0.522 0.499 0.032 n y n ruditapes2_lrc6211 -? 0.522 0.41 0 n y n ruditapes_c13022 -1.352 0.523 10.949 8.098 n n n ruditapes_c20864 -1.423 0.523 8.161 5.737 n n n ruditapes_c16427 1.917 0.523 1.391 2.666 n y n ruditapes_c28538 2.948 0.523 slain2 protein 0.419 1.236 n y n ruditapes_c28403 2.979 0.523 0.41 1.22 n y n ruditapes_c18780 3.238 0.523 0.342 1.109 n y n ruditapes2_c1826 -2.17 0.523 2.081 0.959 n y n ruditapes_c19496 -2.471 0.523 1.639 0.663 n y n ruditapes_c27031 7.195 0.523 0.087 0.626 n y n ruditapes_c7572 -2.965 0.523 1.252 0.422 n y n ruditapes2_lrc3468 -3.018 0.523 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 1.229 0.407 n y n ruditapes_c16899 ? 0.523 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0 0.407 n y n ruditapes_c11584 -3.079 0.523 1.196 0.389 n y n ruditapes_c10572 -3.336 0.523 1.093 0.328 n y n ruditapes_c26745 -3.494 0.523 1.039 0.297 n y n ruditapes_lrc38131 -3.892 0.523 tandem repeat galectin 0.935 0.24 n y n ruditapes_lrc23201 -7.227 0.523 copper radical oxidase 0.629 0.087 n y n ruditapes_c31567 -11.119 0.523 0.539 0.048 n y n ruditapes_c990 -13.343 0.523 0.515 0.039 n y n ruditapes_c20759 -? 0.523 0.408 0 n y n ruditapes_c12659 -? 0.523 0.407 0 n y n ruditapes2_c213 -1.318 0.524 predicted protein [Nematostella vectensis] 12.938 9.82 n n n ruditapes_c34262 1.445 0.524 4.835 6.986 n n n ruditapes2_c1914 1.47 0.524 bromodomain-containing protein 2 precursor 4.388 6.452 n n n ruditapes_c17103 1.48 0.524 suppressor of fused homolog /// 0033333 // fin development /// 0005515 // protein binding /// 0002088 // lens development in camera-type eye /// 0045879 // negative regulation of smoothened signaling pathway /// 0035301 // Hedgehog signaling complex 4.229 6.259 n n n ruditapes_c26138 1.624 0.524 2.665 4.328 n y n ruditapes2_c5351 -1.574 0.524 component of the counting factor complex 5.153 3.275 n y n ruditapes2_c2772 -1.731 0.524 PREDICTED: similar to C09D4.2 [Hydra magnipapillata] 3.667 2.118 n y n ruditapes_c1808 -1.939 0.524 2.668 1.376 n y n ruditapes_c23906 2.878 0.524 0.442 1.272 n y n ruditapes_c28077 -1.99 0.524 2.508 1.26 n y n ruditapes_c3124 -2.043 0.524 2.358 1.154 n y n ruditapes_lrc33788 -2.065 0.524 kda midgut partial 2.308 1.118 n y n ruditapes_c19486 3.26 0.524 0.336 1.094 n y n ruditapes_s38388 -2.224 0.524 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 1.978 0.889 n y n ruditapes2_c3007 -2.432 0.524 1.676 0.689 n y n ruditapes2_c6731 7.195 0.524 predicted protein [Nematostella vectensis] 0.086 0.62 n y n ruditapes_c26857 ? 0.524 0 0.407 n y n ruditapes_c4192 ? 0.524 0 0.407 n y n ruditapes_c11231 ? 0.524 sa hypertension-associated homolog /// 0005524 // ATP binding /// 0005759 // mitochondrial matrix /// 0006633 // fatty acid biosynthetic process /// 0047760 // butyrate-CoA ligase activity /// 0000287 // magnesium ion binding /// 0015645 // fatty-acid ligase activity 0 0.406 n y n ruditapes_c12282 ? 0.524 0 0.406 n y n ruditapes_c17107 ? 0.524 0 0.406 n y n ruditapes_c9611 ? 0.524 c-type lectin domain family member e /// 0042742 // defense response to bacterium 0 0.406 n y n ruditapes_s39041 -3.032 0.524 1.216 0.401 n y n ruditapes2_c2081 -3.706 0.524 complement c1q-like protein 4 precursor 0.973 0.263 n y n ruditapes_c23851 -4.077 0.524 "PREDICTED: similar to predicted protein, partial [Hydra magnipapillata]" 0.894 0.219 n y n ruditapes_c22720 -5.189 0.524 protein 0.748 0.144 n y n ruditapes2_c6400 -5.559 0.524 0.714 0.128 n y n ruditapes_c22893 -6.671 0.524 0.65 0.097 n y n ruditapes_lrc35407 -6.671 0.524 cytoplasmic actin /// 0005488 // binding 0.65 0.097 n y n ruditapes_c11747 1.218 0.525 aquaporin 4 /// 0015250 // water channel activity /// 0030104 // water homeostasis /// 0005887 // integral to plasma membrane /// 0006833 // water transport 17.705 21.557 n n n ruditapes2_c3682 1.23 0.525 mitochondrial 28s ribosomal protein s33 /// 0005763 // mitochondrial small ribosomal subunit /// 0003735 // structural constituent of ribosome 16.016 19.697 n n n ruditapes_c30331 1.333 0.525 8.13 10.835 n n n ruditapes_c27655 -1.324 0.525 12.446 9.399 n n n ruditapes_c3823 -1.363 0.525 galactose soluble 9 /// 0005529 // sugar binding 10.307 7.561 n n n ruditapes_c17809 -1.386 0.525 9.357 6.753 n n n ruditapes_c31999 1.783 0.525 1.796 3.201 n y n ruditapes_c27509 -1.597 0.525 4.841 3.031 n y n ruditapes_c27977 -1.66 0.525 4.208 2.535 n y n ruditapes_c13946 -1.725 0.525 3.699 2.145 n y n ruditapes_c20026 -1.765 0.525 3.443 1.951 n y n ruditapes_c25723 -1.9 0.525 2.803 1.475 n y n ruditapes_c80 -1.972 0.525 allograft inflammatory factor 1 /// 0008285 // negative regulation of cell proliferation /// 0044425 // membrane part /// 0005634 // nucleus /// 0007050 // cell cycle arrest /// 0006954 // inflammatory response 2.551 1.294 n y n ruditapes_c18860 -2.335 0.525 1.79 0.766 n y n ruditapes_lrc39184 4.947 0.525 0.154 0.76 n y n ruditapes2_c821 8.094 0.525 translation elongation factor 2 0.073 0.59 n y n ruditapes2_c2661 ? 0.525 thioredoxin a 0 0.404 n y n ruditapes2_lrc6827 ? 0.525 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation /// 0009312 // oligosaccharide biosynthetic process /// 0044424 // intracellular part 0 0.404 n y n ruditapes_c18649 ? 0.525 epidermal growth factor receptor /// 0016740 // transferase activity 0 0.404 n y n ruditapes_lrc27935 ? 0.525 0 0.404 n y n ruditapes2_lrc6249 -3.336 0.525 1.08 0.324 n y n ruditapes_c9932 -4.448 0.525 0.829 0.186 n y n ruditapes_c22679 -7.116 0.525 0.625 0.088 n y n ruditapes_c21307 -15.566 0.525 0.491 0.032 n y n ruditapes2_c1828 -17.79 0.525 0.479 0.027 n y n ruditapes_c20453 -? 0.525 0.405 0 n y n ruditapes_c11338 -1.198 0.526 29.257 24.429 n n n ruditapes_c14079 1.271 0.526 cat eye syndrome chromosome candidate 5 homolog 11.758 14.948 n n n ruditapes2_lrc5227 -1.281 0.526 nadh dehydrogenase 1 alpha subcomplex subunit 6 "/// 0003954 // NADH dehydrogenase activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0005747 // mitochondrial respiratory chain complex I" 15.741 12.291 n n n ruditapes_c4334 -1.34 0.526 11.408 8.514 n n n ruditapes_c31321 1.412 0.526 5.506 7.774 n n n ruditapes_c23870 -1.438 0.526 7.623 5.301 n n n ruditapes2_c957 -1.485 0.526 keratinocyte associated protein 2 /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0005615 // extracellular space /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity 6.53 4.396 n n n ruditapes_c6533 -1.637 0.526 4.39 2.682 n y n ruditapes2_c1622 -1.657 0.526 4.2 2.535 n y n ruditapes_c10218 -1.702 0.526 26s proteasome subunit s9 /// 0006508 // proteolysis /// 0005838 // proteasome regulatory particle 3.841 2.257 n y n ruditapes_c16243 -1.819 0.526 3.132 1.721 n y n ruditapes_c24663 2.57 0.526 0.575 1.477 n y n ruditapes_c6968 2.642 0.526 39s ribosomal protein mitochondrial /// 0015934 // large ribosomal subunit 0.536 1.417 n y n ruditapes_lrc33730 3.747 0.526 developmentally-regulated vdg3 0.251 0.939 n y n ruditapes_c29035 -2.33 0.526 1.791 0.769 n y n ruditapes_lrc17980 -2.458 0.526 1.627 0.662 n y n ruditapes_c16337 7.645 0.526 0.078 0.6 n y n ruditapes_c4304 -2.594 0.526 hypothetical protein BRAFLDRAFT_231170 [Branchiostoma floridae] 1.491 0.575 n y n ruditapes_c25229 -2.628 0.526 1.466 0.558 n y n ruditapes2_c2397 -2.809 0.526 low density lipo protein 12 1.33 0.474 n y n ruditapes2_c728 ? 0.526 0 0.403 n y n ruditapes_c21154 -3.614 0.526 protein of hypothetical function duf985 0.987 0.273 n y n ruditapes_c24240 -6.671 0.526 0.643 0.096 n y n ruditapes_c7975 -10.007 0.526 0.547 0.055 n y n ruditapes_c14053 -? 0.526 0.403 0 n y n ruditapes_c20784 -1.328 0.527 12.095 9.109 n n n ruditapes2_c2929 1.402 0.527 5.726 8.03 n n n ruditapes_c29460 -1.433 0.527 7.723 5.389 n n n ruditapes_c29192 1.574 0.527 3.04 4.785 n y n ruditapes_c7557 1.629 0.527 superoxide dismutase /// 0046914 // transition metal ion binding /// 0055114 // oxidation reduction /// 0004784 // superoxide dismutase activity /// 0006801 // superoxide metabolic process 2.593 4.224 n y n ruditapes_c27915 -1.605 0.527 pol-like protein 4.709 2.934 n y n ruditapes_c3032 -1.74 0.527 3.558 2.045 n y n ruditapes_c19061 -1.887 0.527 2.833 1.502 n y n ruditapes_c22143 -2.118 0.527 tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation beta polypeptide /// 0048471 // perinuclear region of cytoplasm /// 0007126 // meiosis /// 0007346 // regulation of mitotic cell cycle /// 0019904 // protein domain specific binding /// 0002119 // nematode larval development /// 0006605 // protein targeting /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0005634 // nucleus /// 0001708 // cell fate specification /// 0007265 // Ras protein signal transduction /// 0008633 // activation of pro-apoptotic gene products /// 0035308 // negative regulation of protein amino acid dephosphorylation /// 0045167 // asymmetric protein localization involved in cell fate determination /// 0004497 // monooxygenase activity /// 0000132 // establishment of mitotic spindle orientation /// 0043085 // positive regulation of catalytic activity /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0005813 // centrosome /// 0010070 // zygote asymmetric cell division /// 0005938 // cell cortex /// 0009949 // polarity specification of anterior/posterior axis /// 0019899 // enzyme binding /// 0009792 // embryonic development ending in birth or egg hatching /// 0030590 // pseudocleavage during first cell cycle 2.148 1.014 n y n ruditapes_c7050 -2.144 0.527 protein 2.092 0.976 n y n ruditapes_c23890 -2.154 0.527 2.078 0.965 n y n ruditapes_c19761 -2.176 0.527 alanyl-trna synthetase domain containing 1 /// 0005488 // binding 2.032 0.934 n y n ruditapes_c17012 -2.224 0.527 1.949 0.876 n y n ruditapes_c18394 -2.224 0.527 scavenger receptor cysteine-rich protein type 12 partial /// 0009987 // cellular process /// 0044464 // cell part 1.941 0.873 n y n ruditapes_c10303 -2.502 0.527 1.572 0.629 n y n ruditapes2_c3807 -2.7 0.527 calcium binding protein 1 1.402 0.519 n y n ruditapes_c15163 ? 0.527 0 0.401 n y n ruditapes_c8776 ? 0.527 0 0.401 n y n ruditapes_c26068 ? 0.527 0 0.4 n y n ruditapes_c2955 -3.336 0.527 hypothetical protein TRIADDRAFT_53031 [Trichoplax adhaerens] 1.072 0.321 n y n ruditapes_c13673 -3.336 0.527 1.069 0.32 n y n ruditapes_c10068 -3.494 0.527 1.019 0.292 n y n ruditapes_c20510 -? 0.527 0.399 0 n y n ruditapes_c30557 -? 0.527 0.399 0 n y n ruditapes_c2651 -1.189 0.528 31.313 26.327 n n n ruditapes_c7984 -1.246 0.528 19.517 15.659 n n n ruditapes_c2828 -1.368 0.528 nadh dehydrogenase ubiquinone fe-s 8 precursor "/// 0032981 // mitochondrial respiratory chain complex I assembly /// 0006810 // transport /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0006979 // response to oxidative stress /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0009055 // electron carrier activity /// 0005506 // iron ion binding" 9.966 7.287 n n n ruditapes_c11348 -1.401 0.528 8.671 6.191 n n n ruditapes_c12593 -1.514 0.528 5.917 3.907 n y n ruditapes_c18087 -1.538 0.528 5.54 3.602 n y n ruditapes2_c1766 -1.553 0.528 actin-like 6b "/// 0005524 // ATP binding /// 0006355 // regulation of transcription, DNA-dependent /// 0005200 // structural constituent of cytoskeleton /// 0004190 // aspartic-type endopeptidase activity /// 0006508 // proteolysis /// 0016514 // SWI/SNF complex /// 0005515 // protein binding /// 0006333 // chromatin assembly or disassembly /// 0006338 // chromatin remodeling /// 0040008 // regulation of growth /// 0003682 // chromatin binding" 5.319 3.426 n y n ruditapes_c21878 1.761 0.528 1.856 3.268 n y n ruditapes_c30718 -1.58 0.528 4.969 3.145 n y n ruditapes_s40373 1.878 0.528 alpha-3-tubulin [Gecarcinus lateralis] 1.459 2.739 n y n ruditapes_c21300 2.075 0.528 transcription elongation 1.043 2.165 n y n ruditapes_s37988 2.548 0.528 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0002119 // nematode larval development /// 0040015 // negative regulation of multicellular organism growth /// 0040011 // locomotion /// 0005829 // cytosol /// 0043621 // protein self-association /// 0010171 // body morphogenesis /// 0019510 // S-adenosylhomocysteine catabolic process /// 0009792 // embryonic development ending in birth or egg hatching 0.581 1.481 n y n ruditapes_c25748 -2.001 0.528 2.425 1.212 n y n ruditapes2_c3256 -2.07 0.528 2.249 1.086 n y n ruditapes_c1455 3.822 0.528 0.239 0.913 n y n ruditapes2_c1451 ? 0.528 qm-like protein /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0.399 n y n ruditapes_lrc40079 ? 0.528 hypothetical protein BRAFLDRAFT_84428 [Branchiostoma floridae] 0 0.399 n y n ruditapes_c19884 -4.077 0.528 0.875 0.215 n y n ruditapes_c28136 -4.17 0.528 0.861 0.207 n y n ruditapes_c1122 -6.115 0.528 0.666 0.109 n y n ruditapes_s37659 -13.343 0.528 cytochrome c oxidase subunit va 0.501 0.038 n y n ruditapes_c28405 -? 0.528 0.399 0 n y n ruditapes_s38841 -? 0.528 nadh dehydrogenase 1 beta 8kda 0.399 0 n y n ruditapes2_lrc1632 -1.312 0.529 13.008 9.915 n n n ruditapes_c9651 -1.491 0.529 6.306 4.23 n n n ruditapes_c20782 -1.574 0.529 5.012 3.185 n y n ruditapes_c15470 1.939 0.529 1.295 2.51 n y n ruditapes_c19136 2.061 0.529 1.058 2.18 n y n ruditapes_c25650 -1.84 0.529 2.998 1.629 n y n ruditapes_c14438 3.597 0.529 0.268 0.965 n y n ruditapes_c30427 -2.173 0.529 #NAME? 2.018 0.929 n y n ruditapes_c24707 -2.471 0.529 1.591 0.644 n y n ruditapes2_c1686 8.769 0.529 elongation factor 1 alpha /// 0006414 // translational elongation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005737 // cytoplasm /// 0003746 // translation elongation factor activity 0.064 0.56 n y n ruditapes_c19081 8.994 0.529 cg6847 cg6847-pa 0.062 0.555 n y n ruditapes2_c6976 -2.83 0.529 enhancer of rudimentary homolog /// 0007049 // cell cycle /// 0006221 // pyrimidine nucleotide biosynthetic process /// 0006207 // 'de novo' pyrimidine base biosynthetic process 1.294 0.457 n y n ruditapes_c30818 ? 0.529 0 0.396 n y n ruditapes_c31045 ? 0.529 0 0.396 n y n ruditapes_c5073 ? 0.529 zinc finger in n-recognin family protein 0 0.396 n y n ruditapes_c30070 -3.437 0.529 1.028 0.299 n y n ruditapes_c10608 -4.13 0.529 0.861 0.208 n y n ruditapes_c5053 -6.115 0.529 0.661 0.108 n y n ruditapes_lrc21510 -6.671 0.529 0.632 0.095 n y n ruditapes_lrc7566 -7.783 0.529 0.591 0.076 n y n ruditapes_c10654 -8.339 0.529 dudulin 2 /// 0046872 // metal ion binding /// 0006826 // iron ion transport /// 0005768 // endosome /// 0005886 // plasma membrane /// 0006917 // induction of apoptosis /// 0000293 // ferric-chelate reductase activity 0.575 0.069 n y n ruditapes_c18084 -15.566 0.529 0.482 0.031 n y n ruditapes2_c6207 -? 0.529 developmentally-regulated vdg3 0.396 0 n y n ruditapes_c20296 -? 0.529 0.396 0 n y n ruditapes_c15435 -? 0.529 0.395 0 n y n ruditapes_c22191 -? 0.529 0.395 0 n y n ruditapes2_c1422 -1.212 0.53 25.294 20.873 n n n ruditapes_c16171 -1.341 0.53 11.125 8.296 n n n ruditapes_c4154 -1.347 0.53 10.802 8.019 n n n ruditapes2_c220 1.579 0.53 chaperonin containing subunit 2 /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004672 // protein kinase activity /// 0051082 // unfolded protein binding /// 0006457 // protein folding 2.955 4.665 n y n ruditapes_c24543 -1.668 0.53 calmodulin /// 0005509 // calcium ion binding 4.042 2.424 n y n ruditapes_c28985 -1.668 0.53 4.034 2.419 n y n ruditapes_c8668 -1.751 0.53 purple acid /// 0046914 // transition metal ion binding /// 0016787 // hydrolase activity 3.457 1.975 n y n ruditapes_c16677 -1.866 0.53 2.866 1.535 n y n ruditapes_c8006 -2.097 0.53 2.163 1.032 n y n ruditapes_c14385 -2.1 0.53 2.162 1.03 n y n ruditapes_lrc34493 3.71 0.53 0.251 0.93 n y n ruditapes_c21383 -2.313 0.53 1.781 0.77 n y n ruditapes2_c3219 -2.651 0.53 universal stress protein 1.417 0.534 n y n ruditapes_c33320 -2.669 0.53 DEC-3 [Lymnaea stagnalis] 1.4 0.525 n y n ruditapes_c8443 -2.737 0.53 tousled-like kinase 1 /// 0005524 // ATP binding /// 0007242 // intracellular signaling cascade /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0006886 // intracellular protein transport /// 0005515 // protein binding /// 0001672 // regulation of chromatin assembly or disassembly /// 0004674 // protein serine/threonine kinase activity 1.352 0.494 n y n ruditapes_c22919 ? 0.53 0 0.395 n y n ruditapes_c5207 ? 0.53 hypothetical protein TTHERM_00648850 [Tetrahymena thermophila] 0 0.395 n y n ruditapes_c18040 ? 0.53 0 0.394 n y n ruditapes_c3105 ? 0.53 0 0.394 n y n ruditapes_lrc18892 ? 0.53 0 0.394 n y n ruditapes_c14430 ? 0.53 0 0.393 n y n ruditapes_c19032 -4.448 0.53 0.807 0.182 n y n ruditapes_c14607 -5.003 0.53 c1q and tumor necrosis factor related protein 3 0.744 0.149 n y n ruditapes_c8901 -5.559 0.53 0.695 0.125 n y n ruditapes_lrc31512 -13.343 0.53 hypothetical protein BRAFLDRAFT_63342 [Branchiostoma floridae] 0.497 0.037 n y n ruditapes_c11285 -? 0.53 0.394 0 n y n ruditapes_c18137 -? 0.53 0.394 0 n y n ruditapes_c30842 -? 0.53 0.394 0 n y n ruditapes_c13154 -1.274 0.531 15.99 12.548 n n n ruditapes_c22798 1.311 0.531 8.896 11.665 n n n ruditapes_c20750 -1.297 0.531 13.966 10.766 n n n ruditapes_c24988 1.405 0.531 5.522 7.761 n n n ruditapes_c25232 1.476 0.531 4.155 6.132 n n n ruditapes2_c3201 1.773 0.531 proteasome ( macropain) beta 1 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 1.785 3.165 n y n ruditapes_c15113 -1.597 0.531 4.704 2.946 n y n ruditapes_c15745 -1.628 0.531 4.38 2.69 n y n ruditapes_c20065 -2.022 0.531 2.335 1.155 n y n ruditapes_c22858 -2.335 0.531 Beta-N-acetylhexosaminidase [Shewanella loihica PV-4] 1.739 0.745 n y n ruditapes_c17468 -2.52 0.531 transmembrane protein 93 1.529 0.607 n y n ruditapes_c14688 -2.692 0.531 1.378 0.512 n y n ruditapes2_c5257 ? 0.531 complement component q subcomponent-like 3 /// 0005488 // binding 0 0.393 n y n ruditapes_c11791 ? 0.531 0 0.393 n y n ruditapes_c14996 ? 0.531 0 0.393 n y n ruditapes_c20845 ? 0.531 0 0.392 n y n ruditapes_c23886 ? 0.531 0 0.392 n y n ruditapes_c27543 ? 0.531 0 0.392 n y n ruditapes_c30219 ? 0.531 0 0.392 n y n ruditapes_c8152 -3.058 0.531 1.161 0.38 n y n ruditapes_c1242 -4.765 0.531 sarcoplasmic calcium-binding protein 0.766 0.161 n y n ruditapes_c10260 -5.93 0.531 0.666 0.112 n y n ruditapes_c18772 -7.783 0.531 0.585 0.075 n y n ruditapes_c10101 -10.007 0.531 0.533 0.053 n y n ruditapes_s37592 -13.343 0.531 0.495 0.037 n y n ruditapes_c18105 -13.343 0.531 0.494 0.037 n y n ruditapes_c15765 -20.014 0.531 0.457 0.023 n y n ruditapes_c14782 -? 0.531 0.392 0 n y n ruditapes2_c1295 1.229 0.532 15.59 19.156 n n n ruditapes_lrc35145 -1.251 0.532 atp synthase subunit b "/// 0005811 // lipid particle /// 0006911 // phagocytosis, engulfment /// 0015078 // hydrogen ion transmembrane transporter activity /// 0016787 // hydrolase activity" 18.467 14.757 n n n ruditapes_c5722 -1.328 0.532 probable ribosome biogenesis protein rlp24 11.763 8.858 n n n ruditapes_c17431 -1.372 0.532 9.557 6.964 n n n ruditapes_c22766 1.513 0.532 3.621 5.477 n y n ruditapes_c26422 -1.47 0.532 6.626 4.507 n n n ruditapes_lrc32429 2.069 0.532 ribosomal protein l14 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.034 2.138 n y n ruditapes_c17518 -1.815 0.532 mmp37-like mitochondrial precursor /// 0006810 // transport 3.074 1.693 n y n ruditapes_c5718 -1.937 0.532 2.576 1.33 n y n ruditapes_s38529 2.998 0.532 0.387 1.161 n y n ruditapes_c18870 -2.485 0.532 1.557 0.626 n y n ruditapes_c8059 -2.485 0.532 1.554 0.625 n y n ruditapes_lrc38652 -2.575 0.532 1.47 0.571 n y n ruditapes_c22882 -2.78 0.532 1.307 0.47 n y n ruditapes_c20773 ? 0.532 0 0.391 n y n ruditapes_c22057 ? 0.532 si:ch211- protein 0 0.391 n y n ruditapes_c30739 ? 0.532 0 0.39 n y n ruditapes_c18405 -4.448 0.532 0.802 0.18 n y n ruditapes_lrc33247 -4.448 0.532 gm2 ganglioside activator protein 0.8 0.18 n y n ruditapes_s36873 -5.003 0.532 0.738 0.147 n y n ruditapes_c15463 -5.559 0.532 0.69 0.124 n y n ruditapes_c11291 -5.93 0.532 0.664 0.112 n y n ruditapes_c19283 -5.93 0.532 axonemal dynein heavy chain 0.664 0.112 n y n ruditapes_s36822 -11.119 0.532 0.515 0.046 n y n ruditapes_c20549 -13.343 0.532 0.493 0.037 n y n ruditapes_c28315 -15.566 0.532 0.476 0.031 n y n ruditapes_c7997 -? 0.532 0.391 0 n y n ruditapes_lrc30749 -? 0.532 0.391 0 n y n ruditapes_c16140 -? 0.532 0.39 0 n y n ruditapes_c19024 -? 0.532 0.39 0 n y n ruditapes_c8120 1.6 0.533 2.734 4.375 n y n ruditapes_lrc19188 1.682 0.533 2.189 3.682 n y n ruditapes2_c2027 1.719 0.533 1.994 3.428 n y n ruditapes_c10375 -1.552 0.533 5.201 3.351 n y n ruditapes_c14657 -1.623 0.533 4.374 2.695 n y n ruditapes2_c2491 1.881 0.533 1.418 2.667 n y n ruditapes_c28773 1.949 0.533 1.251 2.437 n y n ruditapes_c14655 -1.779 0.533 3.233 1.817 n y n ruditapes2_c4415 2.456 0.533 0.625 1.534 n y n ruditapes_c19505 -1.87 0.533 2.81 1.503 n y n ruditapes_c2289 -1.927 0.533 2.601 1.35 n y n ruditapes_c14404 -2.009 0.533 phosducin-like protein /// 0007601 // visual perception /// 0050896 // response to stimulus /// 0005737 // cytoplasm /// 0007165 // signal transduction /// 0006457 // protein folding 2.35 1.17 n y n ruditapes_c31907 3.098 0.533 0.358 1.108 n y n ruditapes_c16181 -2.224 0.533 1.886 0.848 n y n ruditapes_c17966 -2.224 0.533 ras- estrogen- growth inhibitor /// 0008285 // negative regulation of cell proliferation /// 0019003 // GDP binding /// 0005634 // nucleus /// 0003924 // GTPase activity /// 0009725 // response to hormone stimulus /// 0005829 // cytosol /// 0030308 // negative regulation of cell growth 1.885 0.848 n y n ruditapes_lrc36353 -2.747 0.533 1.329 0.484 n y n ruditapes_c25328 ? 0.533 serum paraoxonase arylesterase 2 0 0.389 n y n ruditapes_c23049 -3.706 0.533 0.933 0.252 n y n ruditapes_c17990 -4.448 0.533 0.796 0.179 n y n ruditapes_lrc10891 -5.559 0.533 0.685 0.123 n y n ruditapes_c24927 -6.671 0.533 hypothetical protein IscW_ISCW018955 [Ixodes scapularis] "/// 0016020 // membrane /// 0005515 // protein binding /// 0008654 // phospholipid biosynthetic process /// 0016780 // phosphotransferase activity, for other substituted phosphate groups /// 0008270 // zinc ion binding" 0.62 0.093 n y n ruditapes_lrc38926 -6.671 0.533 0.62 0.093 n y n ruditapes_c4808 -8.895 0.533 0.55 0.062 n y n ruditapes_c3982 -13.343 0.533 protein 0.489 0.037 n y n ruditapes_c16549 -22.238 0.533 0.445 0.02 n y n ruditapes_c21627 -? 0.533 0.389 0 n y n ruditapes2_lrc2258 -? 0.533 0.388 0 n y n ruditapes_c18086 -? 0.533 0.388 0 n y n ruditapes_c9696 -? 0.533 0.388 0 n y n ruditapes2_c3168 -1.304 0.534 13.221 10.137 n n n ruditapes_c9708 -1.381 0.534 9.143 6.622 n n n ruditapes_c20161 1.47 0.534 4.181 6.146 n n n ruditapes2_c1233 1.567 0.534 3.003 4.707 n y n ruditapes_c25063 -1.499 0.534 6.02 4.017 n n n ruditapes2_c2533 -1.519 0.534 5.672 3.735 n y n ruditapes_c6939 -1.626 0.534 4.33 2.662 n y n ruditapes_c17655 -1.703 0.534 3.692 2.168 n y n ruditapes_c10256 -1.796 0.534 3.134 1.745 n y n ruditapes_c15680 -1.807 0.534 fimbrin plastin 3.078 1.703 n y n ruditapes_c16410 -1.853 0.534 2.874 1.551 n y n ruditapes_c16936 -1.977 0.534 2.425 1.227 n y n ruditapes_c15306 -2.12 0.534 2.074 0.978 n y n ruditapes2_c2947 -2.224 0.534 1.877 0.844 n y n ruditapes_c30338 -2.287 0.534 1.784 0.78 n y n ruditapes_c25254 -2.341 0.534 1.708 0.73 n y n ruditapes_c26217 -2.436 0.534 1.592 0.654 n y n ruditapes_c15420 ? 0.534 0 0.388 n y n ruditapes_c28574 -3.706 0.534 0.926 0.25 n y n ruditapes_c17812 -4.448 0.534 0.794 0.179 n y n ruditapes_lrc34264 -6.115 0.534 predicted protein [Physcomitrella patens subsp. patens] 0.647 0.106 n y n ruditapes_c23191 -7.783 0.534 0.576 0.074 n y n ruditapes_lrc35077 -11.119 0.534 0.511 0.046 n y n ruditapes_c10565 -13.343 0.534 0.486 0.036 n y n ruditapes_c1203 -? 0.534 0.387 0 n y n ruditapes_c14706 -? 0.534 0.387 0 n y n ruditapes_c18462 -? 0.534 0.387 0 n y n ruditapes_c18696 -? 0.534 0.387 0 n y n ruditapes_c21083 -? 0.534 0.386 0 n y n ruditapes_c8750 -1.287 0.535 14.479 11.246 n n n ruditapes_c16463 -1.321 0.535 11.996 9.081 n n n ruditapes_c10852 -1.334 0.535 11.244 8.427 n n n ruditapes_c3884 -1.366 0.535 9.676 7.083 n n n ruditapes_c4163 -1.412 0.535 8.011 5.673 n n n ruditapes_lrc23718 -1.49 0.535 atp5a1 protein /// 0006810 // transport /// 0022857 // transmembrane transporter activity 6.16 4.136 n n n ruditapes_c23441 1.799 0.535 1.653 2.973 n y n ruditapes_c21214 2.003 0.535 1.131 2.266 n y n ruditapes_c15950 -1.687 0.535 3.792 2.248 n y n ruditapes2_c141 -1.723 0.535 endo- -beta-glucanase "/// 0000272 // polysaccharide catabolic process /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds" 3.528 2.047 n y n ruditapes_lrc20408 -1.837 0.535 2.92 1.59 n y n ruditapes2_c1689 -1.853 0.535 2.857 1.542 n y n ruditapes_c21000 -2.076 0.535 2.156 1.039 n y n ruditapes2_lrc2955 -2.158 0.535 1.99 0.922 n y n ruditapes_lrc36951 3.935 0.535 countin-like protein 0.219 0.86 n y n ruditapes_c7376 -2.402 0.535 1.62 0.675 n y n ruditapes_c23481 ? 0.535 0 0.385 n y n ruditapes_c26585 ? 0.535 carboxypeptidase a2 0 0.385 n y n ruditapes_lrc38378 ? 0.535 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 0 0.384 n y n ruditapes_c25457 -3.177 0.535 zinc finger protein 180 1.09 0.343 n y n ruditapes_lrc34807 -3.78 0.535 0.908 0.24 n y n ruditapes_c24494 -4.077 0.535 kdel (lys-asp-glu-leu) containing 1 0.849 0.208 n y n ruditapes_c15019 -5.189 0.535 hypothetical protein BGAPBR_D0006 [Borrelia garinii PBr] 0.708 0.137 n y n ruditapes_c13958 -8.895 0.535 0.544 0.061 n y n ruditapes_lrc25428 -11.119 0.535 0.509 0.046 n y n ruditapes_c12632 -1.283 0.536 myosin heavy chain /// 0005488 // binding 14.77 11.51 n n n ruditapes_c2636 -1.296 0.536 13.709 10.577 n n n ruditapes_c22033 1.544 0.536 3.196 4.934 n y n ruditapes_c6049 1.619 0.536 2.551 4.13 n y n ruditapes_c1562 -1.541 0.536 brain protein i3 5.293 3.436 n y n ruditapes_c23618 -1.582 0.536 4.762 3.009 n y n ruditapes_c23999 1.868 0.536 1.429 2.668 n y n ruditapes_lrc13186 2.024 0.536 1.085 2.195 n y n ruditapes_c26260 -1.738 0.536 3.418 1.966 n y n ruditapes_c23025 3.148 0.536 0.341 1.073 n y n ruditapes_c2494 -2.33 0.536 1.704 0.732 n y n ruditapes_c9731 -2.341 0.536 1.693 0.723 n y n ruditapes_c28333 5.396 0.536 0.126 0.681 n y n ruditapes_c3227 5.546 0.536 0.121 0.671 n y n ruditapes_c12944 5.621 0.536 0.118 0.664 n y n ruditapes_lrc32418 -2.594 0.536 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 1.425 0.549 n y n ruditapes_c8156 8.544 0.536 0.064 0.547 n y n ruditapes_c17338 -2.692 0.536 1.347 0.5 n y n ruditapes2_c2978 -2.841 0.536 sorting nexin- 1.248 0.439 n y n ruditapes_c16725 ? 0.536 0 0.383 n y n ruditapes_c26165 ? 0.536 0 0.383 n y n ruditapes_c31499 ? 0.536 0 0.383 n y n ruditapes_c10760 -3.139 0.536 universal stress protein 1.098 0.35 n y n ruditapes_c26616 -3.459 0.536 0.987 0.285 n y n ruditapes_c18138 -4.448 0.536 0.784 0.176 n y n ruditapes_c28433 -7.413 0.536 0.583 0.079 n y n ruditapes_c9266 -7.783 0.536 0.571 0.073 n y n ruditapes_c24408 -? 0.536 0.382 0 n y n ruditapes_c5685 -1.105 0.537 ubiquitin /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0002119 // nematode larval development /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000003 // reproduction /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0009792 // embryonic development ending in birth or egg hatching /// 0042062 // long-term strengthening of neuromuscular junction 92.316 83.536 n n n ruditapes_c27760 -1.425 0.537 7.549 5.296 n n n ruditapes_c5068 -1.503 0.537 5.845 3.888 n y n ruditapes2_lrc4487 -1.744 0.537 kda midgut partial 3.371 1.933 n y n ruditapes_c4585 -1.766 0.537 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 3.241 1.835 n y n ruditapes_c12109 -1.858 0.537 2.812 1.513 n y n ruditapes_c2802 -1.921 0.537 2.578 1.342 n y n ruditapes_c11455 3.448 0.537 0.281 0.967 n y n ruditapes_c16659 -2.147 0.537 phytanoyl- dioxygenase 1.985 0.924 n y n ruditapes_c5552 -2.383 0.537 1.63 0.684 n y n ruditapes_c23351 ? 0.537 0 0.382 n y n ruditapes_c22109 ? 0.537 0 0.381 n y n ruditapes_c10477 ? 0.537 golgi membrane protein 1 0 0.38 n y n ruditapes_c19623 -3.058 0.537 1.126 0.368 n y n ruditapes_lrc35478 -4.077 0.537 cytochrome b-c1 complex subunit 8 0.839 0.206 n y n ruditapes_c19461 -5.93 0.537 0.647 0.109 n y n ruditapes_c18890 -13.343 0.537 0.479 0.036 n y n ruditapes_c8142 -13.343 0.537 0.479 0.036 n y n ruditapes2_lrc4645 -15.566 0.537 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0.464 0.03 n y n ruditapes_c13934 -? 0.537 0.382 0 n y n ruditapes_c18951 -? 0.537 0.382 0 n y n ruditapes_c20043 -? 0.537 0.381 0 n y n ruditapes_c22646 1.083 0.538 98.234 106.355 n n n ruditapes_c8026 1.331 0.538 7.7 10.252 n n n ruditapes_c18941 -1.342 0.538 10.653 7.939 n n n ruditapes_c26458 -1.364 0.538 9.631 7.062 n n n ruditapes_c21689 1.58 0.538 2.821 4.457 n y n ruditapes2_c3684 1.799 0.538 1.626 2.925 n y n ruditapes2_c1035 2.181 0.538 serine threonine kinase 25 (ste20 yeast) 0.85 1.855 n y n ruditapes_c20089 -1.789 0.538 creb binding protein "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0051577 // MyoD binding /// 0018076 // N-terminal peptidyl-lysine acetylation /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0001666 // response to hypoxia /// 0004871 // signal transducer activity /// 0004402 // histone acetyltransferase activity /// 0005737 // cytoplasm /// 0006461 // protein complex assembly /// 0045941 // positive regulation of transcription /// 0016573 // histone acetylation" 3.112 1.74 n y n ruditapes_c22491 -1.816 0.538 2.983 1.642 n y n ruditapes_c11635 -2.224 0.538 1.845 0.829 n y n ruditapes_c13180 -2.224 0.538 1.843 0.829 n y n ruditapes_c10187 ? 0.538 defective in cullin neddylation protein 0 0.38 n y n ruditapes_c3643 ? 0.538 0 0.379 n y n ruditapes2_lrc3917 -4.2 0.538 0.816 0.194 n y n ruditapes_lrc28102 -8.895 0.538 0.538 0.061 n y n ruditapes_c29966 -8.895 0.538 0.536 0.06 n y n ruditapes_c17425 -? 0.538 0.38 0 n y n ruditapes_c26306 -? 0.538 0.38 0 n y n ruditapes_c10387 -? 0.538 0.379 0 n y n ruditapes_c22869 -? 0.538 sarcoplasmic calcium-binding protein 0.379 0 n y n ruditapes_lrc39924 -? 0.538 protein /// 0016787 // hydrolase activity 0.379 0 n y n ruditapes_c37080 -1.18 0.539 myc homolog 32.55 27.587 n n n ruditapes2_c948 -1.189 0.539 29.599 24.885 n n n ruditapes_c8253 -1.25 0.539 18.15 14.525 n n n ruditapes_lrc32624 -1.46 0.539 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 6.647 4.553 n n n ruditapes_c10458 -1.537 0.539 5.251 3.415 n y n ruditapes_c9223 1.816 0.539 elegans protein confirmed by transcript evidence 1.56 2.834 n y n ruditapes_lrc35068 -1.744 0.539 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0040010 // positive regulation of growth rate /// 0008121 // ubiquinol-cytochrome-c reductase activity" 3.35 1.921 n y n ruditapes_c22633 -1.747 0.539 3.327 1.904 n y n ruditapes_c13553 -1.779 0.539 3.141 1.766 n y n ruditapes_c31408 -1.787 0.539 3.11 1.74 n y n ruditapes_c10030 -2.046 0.539 2.191 1.071 n y n ruditapes_c22598 3.148 0.539 0.336 1.059 n y n ruditapes_lrc36698 ? 0.539 placenta-specific 8 0 0.378 n y n ruditapes_c10430 ? 0.539 0 0.377 n y n ruditapes_c12897 ? 0.539 0 0.377 n y n ruditapes_c24016 ? 0.539 0 0.377 n y n ruditapes_c25988 -3.113 0.539 1.091 0.351 n y n ruditapes_c11831 -3.15 0.539 sult1c sulfotransferase /// 0009308 // amine metabolic process /// 0005856 // cytoskeleton /// 0008146 // sulfotransferase activity /// 0005737 // cytoplasm 1.078 0.342 n y n ruditapes_c11794 -3.212 0.539 1.052 0.327 n y n ruditapes_lrc34437 -3.812 0.539 atp synthase beta subunit "/// 0005524 // ATP binding /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 0.883 0.232 n y n ruditapes_c2914 -5.083 0.539 0.704 0.138 n y n ruditapes_lrc17784 -7.783 0.539 0.562 0.072 n y n ruditapes_c28770 -10.007 0.539 0.513 0.051 n y n ruditapes_c24529 -13.343 0.539 0.474 0.036 n y n ruditapes_c10459 -22.238 0.539 hypothetical protein BRAFLDRAFT_87529 [Branchiostoma floridae] 0.432 0.019 n y n ruditapes2_c3085 -? 0.539 novel protein vertebrate heat shock 70kda protein 12a 0.378 0 n y n ruditapes_s36296 -? 0.539 0.377 0 n y n ruditapes2_c339 -1.116 0.54 74.866 67.086 n n n ruditapes2_lrc5236 -1.18 0.54 32.343 27.4 n n n ruditapes_c14553 -1.356 0.54 9.889 7.294 n n n ruditapes_c9580 -1.41 0.54 7.892 5.599 n n n ruditapes_c21879 1.529 0.54 3.29 5.03 n y n ruditapes_c2462 -1.477 0.54 6.245 4.229 n n n ruditapes2_c943 -1.483 0.54 6.129 4.135 n n n ruditapes_c22531 -1.522 0.54 5.479 3.601 n y n ruditapes_c10709 -1.528 0.54 5.365 3.511 n y n ruditapes2_lrc4660 -1.599 0.54 4.471 2.796 n y n ruditapes_c29140 1.874 0.54 1.386 2.597 n y n ruditapes2_lrc5104 -1.676 0.54 nadh dehydrogenase 1 beta 8kda 3.773 2.251 n y n ruditapes_c16710 -1.696 0.54 3.634 2.142 n y n ruditapes_c8324 -1.753 0.54 mpv17 protein /// 0044446 // intracellular organelle part /// 0044237 // cellular metabolic process /// 0005739 // mitochondrion /// 0031090 // organelle membrane /// 0005777 // peroxisome 3.269 1.865 n y n ruditapes_c12894 -1.765 0.54 3.212 1.82 n y n ruditapes_c15412 -1.779 0.54 loc495278 protein /// 0005515 // protein binding /// 0005737 // cytoplasm 3.131 1.76 n y n ruditapes_c24342 -1.853 0.54 2.789 1.505 n y n ruditapes_c15841 -1.962 0.54 rttn protein /// 0007368 // determination of left/right symmetry 2.404 1.225 n y n ruditapes_c19790 -2.059 0.54 hydroxyacyl-coenzyme a dehydrogenase 3-ketoacyl-coenzyme a thiolase enoyl-coenzyme a hydratase (trifunctional protein) alpha subunit /// 0042493 // response to drug /// 0006635 // fatty acid beta-oxidation /// 0003985 // acetyl-CoA C-acetyltransferase activity /// 0051287 // NAD or NADH binding /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity /// 0003988 // acetyl-CoA C-acyltransferase activity /// 0042645 // mitochondrial nucleoid /// 0005743 // mitochondrial inner membrane /// 0016507 // fatty acid beta-oxidation multienzyme complex /// 0016508 // long-chain-enoyl-CoA hydratase activity /// 0004300 // enoyl-CoA hydratase activity /// 0016509 // long-chain-3-hydroxyacyl-CoA dehydrogenase activity 2.15 1.044 n y n ruditapes_c11933 -2.224 0.54 universal stress protein 1.826 0.821 n y n ruditapes_c26810 -2.502 0.54 1.481 0.592 n y n ruditapes_lrc18846 7.195 0.54 0.08 0.576 n y n ruditapes_c22599 -2.78 0.54 1.259 0.453 n y n ruditapes_c16041 ? 0.54 0 0.376 n y n ruditapes_c13678 ? 0.54 0 0.375 n y n ruditapes_c20171 -3.113 0.54 1.089 0.35 n y n ruditapes_c840 -4.892 0.54 chromosome 17 open reading frame 37 0.72 0.147 n y n ruditapes_c22107 -5.93 0.54 0.637 0.107 n y n ruditapes_c15964 -7.783 0.54 0.559 0.072 n y n ruditapes_c28771 -8.895 0.54 0.533 0.06 n y n ruditapes_c16627 -? 0.54 0.376 0 n y n ruditapes_c11833 -1.019 0.541 nadh dehydrogenase subunit 5 "5,011.09" "4,916.60" n n n ruditapes_c8105 -1.243 0.541 18.728 15.065 n n n ruditapes_c14284 1.327 0.541 7.76 10.3 n n n ruditapes_c10592 -1.426 0.541 7.4 5.19 n n n ruditapes2_c2341 1.562 0.541 2.95 4.608 n y n ruditapes2_c2827 -1.644 0.541 ribonuclease t2 /// 0016787 // hydrolase activity 4.024 2.448 n y n ruditapes_lrc16666 -1.681 0.541 3.726 2.217 n y n ruditapes_c10738 3.148 0.541 0.333 1.047 n y n ruditapes_c17574 3.597 0.541 0.252 0.908 n y n ruditapes_c24726 4.722 0.541 0.153 0.724 n y n ruditapes_c14954 -2.355 0.541 1.628 0.691 n y n ruditapes_c19495 ? 0.541 0 0.373 n y n ruditapes_c24113 ? 0.541 0 0.373 n y n ruditapes_c26462 ? 0.541 ensangp00000010363 0 0.373 n y n ruditapes_c7532 -3.212 0.541 1.041 0.324 n y n ruditapes_c11412 -4.448 0.541 0.767 0.172 n y n ruditapes_c14149 -5.003 0.541 0.704 0.141 n y n ruditapes_c20678 -5.93 0.541 0.635 0.107 n y n ruditapes_c24321 -6.115 0.541 0.624 0.102 n y n ruditapes_c16388 -7.783 0.541 0.558 0.072 n y n ruditapes_c28032 -7.783 0.541 0.558 0.072 n y n ruditapes_c12530 -? 0.541 hypothetical protein BRAFLDRAFT_74500 [Branchiostoma floridae] 0.374 0 n y n ruditapes_c28113 -? 0.541 0.373 0 n y n ruditapes_c11201 -1.178 0.542 32.639 27.703 n n n ruditapes_c18387 -1.188 0.542 29.589 24.902 n n n ruditapes2_c768 -1.225 0.542 21.438 17.5 n n n ruditapes_lrc35236 1.282 0.542 10.081 12.927 n n n ruditapes_c10964 -1.512 0.542 insulin-degrading enzyme /// 0008233 // peptidase activity /// 0044464 // cell part 5.572 3.685 n y n ruditapes_c22069 -1.574 0.542 4.71 2.992 n y n ruditapes_c14046 -1.718 0.542 3.45 2.007 n y n ruditapes_c10668 -1.927 0.542 2.493 1.293 n y n ruditapes_c25276 2.773 0.542 0.442 1.225 n y n ruditapes_lrc33879 8.094 0.542 0.067 0.541 n y n ruditapes_c7466 -2.729 0.542 1.278 0.468 n y n ruditapes_c10645 ? 0.542 0 0.373 n y n ruditapes_c5519 -3.494 0.542 PREDICTED: hypothetical protein isoform 1 [Ciona intestinalis] 0.946 0.271 n y n ruditapes_lrc35520 -6.671 0.542 ribosomal protein l11 0.593 0.089 n y n ruditapes_c28277 -8.895 0.542 0.527 0.059 n y n ruditapes_c23251 -11.119 0.542 0.492 0.044 n y n ruditapes_c14085 -11.119 0.542 0.49 0.044 n y n ruditapes_lrc34034 1.137 0.543 ferritin /// 0005488 // binding 37.761 42.952 n n n ruditapes_c2698 1.292 0.543 9.433 12.188 n n n ruditapes_c24545 -1.293 0.543 13.529 10.466 n n n ruditapes2_c422 -1.306 0.543 12.506 9.573 n n n ruditapes_c18797 -1.66 0.543 3.858 2.325 n y n ruditapes_c14365 -1.66 0.543 3.85 2.319 n y n ruditapes_c10529 1.986 0.543 succinate- adp- beta subunit /// 0005524 // ATP binding /// 0004775 // succinate-CoA ligase (ADP-forming) activity /// 0005739 // mitochondrion /// 0006099 // tricarboxylic acid cycle /// 0005515 // protein binding /// 0006781 // succinyl-CoA pathway 1.114 2.213 n y n ruditapes_lrc21866 -1.681 0.543 hypothetical protein P9303_28341 [Prochlorococcus marinus str. MIT 9303] 3.688 2.194 n y n ruditapes_c29000 -1.829 0.543 2.843 1.554 n y n ruditapes_lrc35650 2.417 0.543 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.621 1.501 n y n ruditapes_c30081 3.298 0.543 0.298 0.983 n y n ruditapes_c19197 3.328 0.543 vacuolar protein sorting 26 homolog b ( pombe) /// 0015031 // protein transport /// 0005515 // protein binding /// 0005829 // cytosol /// 0007034 // vacuolar transport /// 0030904 // retromer complex 0.292 0.973 n y n ruditapes2_c1789 -2.224 0.543 1.799 0.809 n y n ruditapes_c13715 4.497 0.543 ral gef with ph domain and sh3 binding motif 2 /// 0016020 // membrane /// 0005515 // protein binding /// 0005622 // intracellular 0.166 0.744 n y n ruditapes_c5560 -2.409 0.543 1.553 0.645 n y n ruditapes_c22734 ? 0.543 0 0.37 n y n ruditapes_c16756 -3.113 0.543 1.07 0.344 n y n ruditapes_c4058 -3.177 0.543 eukaryotic translation initiation factor y-linked /// 0006413 // translational initiation /// 0016491 // oxidoreductase activity /// 0003743 // translation initiation factor activity /// 0003723 // RNA binding 1.045 0.329 n y n ruditapes_c19501 -7.783 0.543 0.551 0.071 n y n ruditapes_c19958 -11.119 0.543 0.488 0.044 n y n ruditapes_lrc20646 -11.119 0.543 0.488 0.044 n y n ruditapes2_c1262 -20.014 0.543 0.431 0.022 n y n ruditapes_c22291 -? 0.543 0.369 0 n y n ruditapes_c28718 1.287 0.544 9.687 12.472 n n n ruditapes_c4287 -1.331 0.544 protein /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 10.912 8.197 n n n ruditapes_c22807 -1.36 0.544 9.532 7.011 n n n ruditapes2_c4118 1.481 0.544 serine protease inhibitor 2 3.816 5.651 n n n ruditapes_c3481 -1.483 0.544 6.027 4.066 n n n ruditapes_c14995 -1.51 0.544 5.548 3.674 n y n ruditapes_c23827 -1.515 0.544 5.47 3.611 n y n ruditapes_c26304 -1.515 0.544 5.466 3.608 n y n ruditapes_lrc39132 -1.659 0.544 ribosomal protein s20 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 3.843 2.317 n y n ruditapes_c28437 -1.66 0.544 formin binding protein 11-related protein /// 0006396 // RNA processing /// 0005634 // nucleus /// 0005515 // protein binding 3.821 2.302 n y n ruditapes_c17016 -1.675 0.544 3.713 2.217 n y n ruditapes_c20571 2.061 0.544 0.983 2.027 n y n ruditapes_lrc31141 -1.766 0.544 3.138 1.777 n y n ruditapes_c29793 -1.792 0.544 3.001 1.675 n y n ruditapes_c24756 6.745 0.544 l-proline 4-hydroxylase 0.086 0.58 n y n ruditapes_c15307 -2.58 0.544 carbonic anhydrase 9 /// 0042493 // response to drug /// 0033574 // response to testosterone stimulus /// 0004089 // carbonate dehydratase activity /// 0016021 // integral to membrane /// 0016323 // basolateral plasma membrane /// 0006730 // one-carbon metabolic process /// 0042995 // cell projection /// 0002009 // morphogenesis of an epithelium /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0046903 // secretion 1.378 0.534 n y n ruditapes_c9321 ? 0.544 0 0.369 n y n ruditapes_c1598 ? 0.544 0 0.368 n y n ruditapes_c27149 ? 0.544 0 0.368 n y n ruditapes_lrc17436 -3.812 0.544 0.862 0.226 n y n ruditapes_c23484 -11.119 0.544 0.485 0.044 n y n ruditapes_c16078 -? 0.544 0.368 0 n y n ruditapes_c4958 -1.198 0.545 26.538 22.146 n n n ruditapes_c764 -1.462 0.545 6.392 4.37 n n n ruditapes_c17546 -1.519 0.545 5.378 3.54 n y n ruditapes_lrc22672 1.799 0.545 1.573 2.829 n y n ruditapes_c11686 -1.66 0.545 3.812 2.297 n y n ruditapes_c29230 3.373 0.545 0.282 0.951 n y n ruditapes_lrc36092 3.777 0.545 40s ribosomal protein s3a /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 0.225 0.85 n y n ruditapes_c25516 -2.224 0.545 cg5131 cg5131-pa 1.784 0.802 n y n ruditapes_c15373 4.047 0.545 universal stress protein 0.197 0.799 n y n ruditapes_c16940 -2.628 0.545 1.337 0.509 n y n ruditapes_c26898 ? 0.545 0 0.366 n y n ruditapes_lrc9424 -3.113 0.545 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 1.058 0.34 n y n ruditapes_c15319 -4.003 0.545 0.82 0.205 n y n ruditapes_c14992 -6.671 0.545 0.584 0.088 n y n ruditapes_lrc34595 -8.895 0.545 0.518 0.058 n y n ruditapes_c30181 -13.343 0.545 acetylcholinesterase precursor 0.462 0.035 n y n ruditapes_c8707 -13.343 0.545 0.46 0.034 n y n ruditapes_c17963 -? 0.545 0.367 0 n y n ruditapes_c4653 1.234 0.546 13.995 17.268 n n n ruditapes_c25941 -1.243 0.546 18.37 14.782 n n n ruditapes2_c2118 -1.309 0.546 transmembrane protein 186 12.158 9.29 n n n ruditapes2_c133 -1.433 0.546 prefoldin subunit 6 /// 0035257 // nuclear hormone receptor binding /// 0016272 // prefoldin complex /// 0004871 // signal transducer activity /// 0008134 // transcription factor binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 7.032 4.907 n n n ruditapes2_c3745 -1.506 0.546 mannose c type 1 5.543 3.681 n y n ruditapes_c8834 -1.583 0.546 4.518 2.854 n y n ruditapes_c29338 1.879 0.546 1.329 2.497 n y n ruditapes_c2407 2.57 0.546 0.521 1.339 n y n ruditapes_s39499 -1.927 0.546 2.438 1.265 n y n ruditapes_c27367 -2.059 0.546 2.084 1.012 n y n ruditapes_s33315 4.047 0.546 0.197 0.796 n y n ruditapes_c23902 -2.541 0.546 inter-alpha inhibitor h3 1.396 0.549 n y n ruditapes_c8591 9.443 0.546 3-hydroxyacyl-coa dehyrogenase /// 0003824 // catalytic activity /// 0008152 // metabolic process 0.053 0.503 n y n ruditapes_c22008 -2.737 0.546 1.25 0.457 n y n ruditapes_c28138 ? 0.546 0 0.365 n y n ruditapes_c17077 -3.113 0.546 3-hydroxy-3-methylglutaryl-coenzyme a synthase 1 /// 0004421 // hydroxymethylglutaryl-CoA synthase activity /// 0016126 // sterol biosynthetic process 1.057 0.339 n y n ruditapes_c10522 -3.113 0.546 1.055 0.339 n y n ruditapes_c30574 -4.448 0.546 0.749 0.168 n y n ruditapes_c17948 -7.783 0.546 leukocyte receptor cluster member 9 0.542 0.07 n y n ruditapes_c13747 -22.238 0.546 0.418 0.019 n y n ruditapes_c20386 -? 0.546 0.364 0 n y n ruditapes_c11554 1.515 0.547 3.322 5.034 n y n ruditapes_c13552 -1.43 0.547 7.102 4.968 n n n ruditapes_lrc32336 1.73 0.547 transforming growth beta induced /// 0005488 // binding /// 0007155 // cell adhesion /// 0044421 // extracellular region part 1.815 3.139 n y n ruditapes_c6250 -1.578 0.547 thioester-containing protein 4.552 2.885 n y n ruditapes_c27870 -1.594 0.547 4.374 2.745 n y n ruditapes_c31761 1.889 0.547 1.299 2.453 n y n ruditapes_c17787 2.024 0.547 1.028 2.081 n y n ruditapes_c26938 -1.723 0.547 3.337 1.937 n y n ruditapes_c13986 -1.744 0.547 3.216 1.844 n y n ruditapes_c20067 -1.809 0.547 mitochondrial ribosomal 2.872 1.587 n y n ruditapes_c17904 -1.853 0.547 2.686 1.449 n y n ruditapes2_c1650 2.698 0.547 0.46 1.242 n y n ruditapes_c29194 3.148 0.547 0.324 1.019 n y n ruditapes_c24028 -2.224 0.547 1.765 0.794 n y n ruditapes_c20241 6.745 0.547 0.085 0.572 n y n ruditapes_c10346 -2.541 0.547 1.388 0.546 n y n ruditapes_lrc39355 -2.566 0.547 1.373 0.535 n y n ruditapes_c31510 8.994 0.547 0.056 0.508 n y n ruditapes_lrc38382 -2.891 0.547 1.151 0.398 n y n ruditapes_c11709 -3.212 0.547 1.013 0.315 n y n ruditapes2_c3398 -3.262 0.547 pe-pgrs family protein 0.994 0.305 n y n ruditapes_c8684 -3.892 0.547 0.831 0.214 n y n ruditapes_c8512 -15.566 0.547 0.442 0.028 n y n ruditapes2_c5642 -1.165 0.548 36.359 31.198 n n n ruditapes_c8888 -1.209 0.548 23.735 19.63 n n n ruditapes_c19618 -1.47 0.548 6.148 4.182 n n n ruditapes_c3591 -1.505 0.548 nicotinamide nucleotide transhydrogenase /// 0055114 // oxidation reduction /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity /// 0015992 // proton transport /// 0006099 // tricarboxylic acid cycle /// 0005746 // mitochondrial respiratory chain /// 0051287 // NAD or NADH binding /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity /// 0016021 // integral to membrane /// 0050661 // NADP or NADPH binding /// 0009055 // electron carrier activity 5.526 3.672 n y n ruditapes_c16020 -1.528 0.548 5.153 3.373 n y n ruditapes_c13916 -1.545 0.548 4.915 3.181 n y n ruditapes2_c88 -1.577 0.548 kazal-type serine protease inhibitor domain-containing protein 4.542 2.88 n y n ruditapes_c8658 1.817 0.548 accessory gland protein 1.489 2.707 n y n ruditapes_c19733 1.911 0.548 1.239 2.368 n y n ruditapes_c4916 -1.76 0.548 3.107 1.765 n y n ruditapes_c8705 2.208 0.548 0.783 1.728 n y n ruditapes_c8713 -1.825 0.548 2.795 1.532 n y n ruditapes2_c1400 -1.842 0.548 cub and zona pellucida-like domains 1 /// 0005576 // extracellular region /// 0048856 // anatomical structure development /// 0007275 // multicellular organismal development /// 0016020 // membrane /// 0050896 // response to stimulus /// 0005737 // cytoplasm 2.721 1.478 n y n ruditapes_c20849 -1.906 0.548 2.48 1.301 n y n ruditapes2_c1509 3.148 0.548 methyltransferase like 1 /// 0006400 // tRNA modification /// 0008176 // tRNA (guanine-N7-)-methyltransferase activity 0.322 1.012 n y n ruditapes_c16377 3.373 0.548 0.278 0.939 n y n ruditapes_c24286 -2.363 0.548 1.563 0.662 n y n ruditapes_c21838 -2.594 0.548 1.339 0.516 n y n ruditapes_lrc32307 -2.747 0.548 1.23 0.448 n y n ruditapes_lrc35010 -2.859 0.548 1.164 0.407 n y n ruditapes2_c2123 ? 0.548 0 0.362 n y n ruditapes_c17813 ? 0.548 sperm associated antigen 1 /// 0005488 // binding /// 0044464 // cell part 0 0.362 n y n ruditapes_c29593 ? 0.548 0 0.361 n y n ruditapes_c13491 ? 0.548 0 0.36 n y n ruditapes_c15915 -3.235 0.548 1.001 0.309 n y n ruditapes_c6474 -3.336 0.548 0.964 0.289 n y n ruditapes_lrc26016 -5.003 0.548 0.681 0.136 n y n ruditapes_lrc35551 -5.003 0.548 ubiquinol-cytochrome c complex iii subunit vii 0.679 0.136 n y n ruditapes_c15723 -7.783 0.548 0.538 0.069 n y n ruditapes_lrc31711 -? 0.548 0.362 0 n y n ruditapes2_c750 1.429 0.549 primary mesenchyme specific protein msp130-related-2 4.57 6.529 n n n ruditapes_c14205 -1.431 0.549 6.973 4.874 n n n ruditapes_c17377 1.63 0.549 2.316 3.775 n y n ruditapes_c14264 -1.519 0.549 5.277 3.475 n y n ruditapes_c2725 -1.593 0.549 4.342 2.725 n y n ruditapes_c25931 2.286 0.549 cg5892 cg5892-pa 0.705 1.611 n y n ruditapes_c5970 2.283 0.549 0.705 1.61 n y n ruditapes_c23125 -1.962 0.549 2.292 1.168 n y n ruditapes_c29588 -2.224 0.549 1.743 0.784 n y n ruditapes_c27497 4.347 0.549 0.17 0.741 n y n ruditapes_c8956 -2.335 0.549 1.595 0.683 n y n ruditapes_c23307 -2.355 0.549 pr domain containing 4 /// 0006366 // transcription from RNA polymerase II promoter /// 0008283 // cell proliferation /// 0003676 // nucleic acid binding /// 0008270 // zinc ion binding /// 0005622 // intracellular /// 0007165 // signal transduction /// 0030308 // negative regulation of cell growth /// 0003702 // RNA polymerase II transcription factor activity 1.565 0.665 n y n ruditapes_c15048 -2.594 0.549 1.332 0.514 n y n ruditapes_c12729 -2.737 0.549 1.23 0.449 n y n ruditapes2_c5360 ? 0.549 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0 0.359 n y n ruditapes2_lrc1554 -28.909 0.549 0.398 0.014 n y n ruditapes_c24515 -? 0.549 0.358 0 n y n ruditapes2_c5134 -1.136 0.55 ribosomal protein l6 /// 0005622 // intracellular 52.612 46.333 n n n ruditapes2_c1236 1.354 0.55 6.415 8.686 n n n ruditapes_lrc25591 -1.377 0.55 8.579 6.232 n n n ruditapes_c2090 1.895 0.55 1.266 2.4 n y n ruditapes_c17106 1.899 0.55 1.26 2.392 n y n ruditapes_c15997 -1.744 0.55 3.156 1.81 n y n ruditapes_c27371 -1.768 0.55 3.033 1.716 n y n ruditapes2_c570 -1.827 0.55 2.761 1.511 n y n ruditapes_c21357 2.548 0.55 per-pentamer repeat gene 0.522 1.33 n y n ruditapes_c31053 2.867 0.55 0.392 1.125 n y n ruditapes_c25663 -2.001 0.55 2.185 1.092 n y n ruditapes_c7175 -2.001 0.55 cd209l1 protein /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0044464 // cell part /// 0007155 // cell adhesion 2.178 1.088 n y n ruditapes_c25422 -2.076 0.55 tctex1 domain-containing protein 2 2.003 0.965 n y n ruditapes2_c6453 -2.127 0.55 1.905 0.895 n y n ruditapes_c20068 3.597 0.55 annexin a11 /// 0005634 // nucleus /// 0005515 // protein binding /// 0005737 // cytoplasm 0.241 0.868 n y n ruditapes_lrc26837 -2.395 0.55 mitochondrial atp synthase alpha subunit "/// 0005524 // ATP binding /// 0005811 // lipid particle /// 0040007 // growth /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0006911 // phagocytosis, engulfment /// 0007286 // spermatid development" 1.517 0.633 n y n ruditapes_c30731 -2.594 0.55 1.326 0.511 n y n ruditapes_c25912 -2.641 0.55 baculoviral iap repeat-containing 2 /// 0007166 // cell surface receptor linked signal transduction /// 0046872 // metal ion binding /// 0005634 // nucleus /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0004842 // ubiquitin-protein ligase activity 1.292 0.489 n y n ruditapes_c26888 -2.78 0.55 1.198 0.431 n y n ruditapes_c4524 ? 0.55 0 0.358 n y n ruditapes_lrc14263 ? 0.55 0 0.357 n y n ruditapes_c23462 -3.058 0.55 cytochrome family subfamily polypeptide 6 /// 0043390 // aflatoxin B1 metabolic process /// 0046872 // metal ion binding /// 0016491 // oxidoreductase activity 1.06 0.347 n y n ruditapes_lrc29024 -3.336 0.55 0.953 0.286 n y n ruditapes_lrc24186 -3.892 0.55 0.821 0.211 n y n ruditapes_c9833 -5.93 0.55 0.606 0.102 n y n ruditapes_lrc38748 -6.115 0.55 0.597 0.098 n y n ruditapes_c11437 -8.154 0.55 0.522 0.064 n y n ruditapes_lrc37811 -8.895 0.55 unnamed protein product [Tetraodon nigroviridis] 0.506 0.057 n y n ruditapes_c15670 -10.007 0.55 0.485 0.049 n y n ruditapes_c23549 -11.119 0.55 0.471 0.042 n y n ruditapes_c9145 -13.343 0.55 0.45 0.034 n y n ruditapes2_c1756 -? 0.55 0.358 0 n y n ruditapes_c11938 -? 0.55 0.357 0 n y n ruditapes_c7558 -? 0.55 0.357 0 n y n ruditapes_c901 -1.336 0.551 nadp transhydrogenase /// 0055114 // oxidation reduction /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity /// 0015992 // proton transport /// 0005488 // binding /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity 10.286 7.698 n n n ruditapes_c1581 -1.341 0.551 beta 4 /// 0005929 // cilium /// 0006414 // translational elongation /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0043025 // cell soma /// 0030182 // neuron differentiation /// 0005874 // microtubule /// 0003746 // translation elongation factor activity /// 0033269 // internode region of axon /// 0007067 // mitosis /// 0043209 // myelin sheath /// 0007018 // microtubule-based movement 10.05 7.493 n n n ruditapes_c29672 -1.364 0.551 9.019 6.612 n n n ruditapes_c13301 1.58 0.551 2.647 4.184 n y n ruditapes_lrc31273 1.588 0.551 sarcoplasmic calcium-binding protein 2.592 4.115 n y n ruditapes_c22899 1.709 0.551 1.869 3.194 n y n ruditapes_c23208 -1.819 0.551 2.769 1.522 n y n ruditapes2_c2560 -1.857 0.551 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 2.624 1.413 n y n ruditapes_c11008 2.968 0.551 hypothetical protein BRAFLDRAFT_75999 [Branchiostoma floridae] 0.361 1.072 n y n ruditapes_c11575 -2.032 0.551 protein 2.091 1.029 n y n ruditapes_c27261 3.148 0.551 0.317 0.998 n y n ruditapes_c2540 -2.224 0.551 dihydroorotate dehydrogenase /// 0004158 // dihydroorotate oxidase activity /// 0055114 // oxidation reduction /// 0005743 // mitochondrial inner membrane /// 0006207 // 'de novo' pyrimidine base biosynthetic process /// 0006222 // UMP biosynthetic process 1.73 0.778 n y n ruditapes2_c181 4.272 0.551 ccaat enhancer binding protein gamma /// 0016563 // transcription activator activity /// 0003700 // transcription factor activity /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0045739 // positive regulation of DNA repair /// 0043353 // enucleate erythrocyte differentiation /// 0043565 // sequence-specific DNA binding /// 0016071 // mRNA metabolic process /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0030183 // B cell differentiation /// 0003690 // double-stranded DNA binding /// 0046982 // protein heterodimerization activity /// 0045078 // positive regulation of interferon-gamma biosynthetic process /// 0016564 // transcription repressor activity /// 0042267 // natural killer cell mediated cytotoxicity /// 0006338 // chromatin remodeling /// 0008134 // transcription factor binding /// 0043433 // negative regulation of transcription factor activity /// 0042803 // protein homodimerization activity 0.174 0.745 n y n ruditapes_c25415 ? 0.551 0 0.356 n y n ruditapes_c11350 ? 0.551 0 0.355 n y n ruditapes_c19925 -3.058 0.551 1.052 0.344 n y n ruditapes_c36082 -3.212 0.551 0.993 0.309 n y n ruditapes_c28777 -5.559 0.551 0.628 0.113 n y n ruditapes_c15775 -11.119 0.551 0.47 0.042 n y n ruditapes_lrc32062 -11.119 0.551 0.469 0.042 n y n ruditapes_c24667 -? 0.551 0.355 0 n y n ruditapes_lrc31157 -1.233 0.552 19.155 15.534 n n n ruditapes_c4554 -1.248 0.552 17.125 13.719 n n n ruditapes_c3469 1.402 0.552 5.06 7.096 n n n ruditapes_c16429 -1.387 0.552 8.148 5.875 n n n ruditapes_c24164 2.548 0.552 0.518 1.321 n y n ruditapes2_c2667 2.788 0.552 0.414 1.155 n y n ruditapes_c11401 -2.138 0.552 1.865 0.872 n y n ruditapes_c28835 -2.372 0.552 ltv1 homolog ( cerevisiae) isoform cra_a 1.523 0.642 n y n ruditapes_c8525 -2.417 0.552 1.475 0.61 n y n ruditapes_lrc35685 8.094 0.552 0.064 0.515 n y n ruditapes_c18454 -2.83 0.552 1.16 0.41 n y n ruditapes_c23495 ? 0.552 0 0.355 n y n ruditapes_c12780 ? 0.552 0 0.354 n y n ruditapes_c21095 ? 0.552 chloride channel 6 /// 0005216 // ion channel activity 0 0.354 n y n ruditapes_c9730 ? 0.552 0 0.354 n y n ruditapes_c11660 ? 0.552 tank-binding kinase 1 /// 0005515 // protein binding /// 0050896 // response to stimulus /// 0004674 // protein serine/threonine kinase activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol 0 0.353 n y n ruditapes_c12610 ? 0.552 0 0.353 n y n ruditapes_c24651 ? 0.552 0 0.353 n y n ruditapes_lrc26376 -3.336 0.552 0.946 0.283 n y n ruditapes_c28854 -3.558 0.552 0.883 0.248 n y n ruditapes_c29319 -4.448 0.552 0.726 0.163 n y n ruditapes_c1520 -4.818 0.552 0.686 0.142 n y n ruditapes_c18118 -13.343 0.552 0.444 0.033 n y n ruditapes_c8911 -? 0.552 0.354 0 n y n ruditapes_lrc35003 -1.175 0.553 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 31.982 27.222 n n n ruditapes2_c218 -1.249 0.553 sodium calcium exchanger /// 0006816 // calcium ion transport /// 0007368 // determination of left/right symmetry /// 0016020 // membrane /// 0051480 // cytosolic calcium ion homeostasis /// 0042044 // fluid transport /// 0001947 // heart looping 16.918 13.545 n n n ruditapes_c25621 -1.249 0.553 16.89 13.518 n n n ruditapes_c33400 1.336 0.553 eukaryotic translation elongation factor 1 beta 2 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005829 // cytosol 6.955 9.291 n n n ruditapes_c17838 -1.34 0.553 9.996 7.461 n n n ruditapes_c11143 -1.421 0.553 7.104 4.999 n n n ruditapes_c22106 1.544 0.553 2.944 4.544 n y n ruditapes_c20081 1.547 0.553 2.911 4.504 n y n ruditapes_c3438 -1.597 0.553 4.228 2.648 n y n ruditapes_c13512 -1.602 0.553 dc2-related axonemal dynein intermediate chain 5 4.158 2.595 n y n ruditapes_c2813 2.277 0.553 0.696 1.584 n y n ruditapes_c21286 -1.8 0.553 2.828 1.571 n y n ruditapes_c26140 -1.873 0.553 2.536 1.354 n y n ruditapes2_c3488 3.092 0.553 0.326 1.008 n y n ruditapes2_c2944 -2.115 0.553 1.898 0.897 n y n ruditapes_c2659 -2.141 0.553 1.847 0.862 n y n ruditapes_c13751 6.745 0.553 0.082 0.555 n y n ruditapes_c22765 -2.502 0.553 1.386 0.554 n y n ruditapes_c29244 -2.859 0.553 hypothetical protein BRAFLDRAFT_132957 [Branchiostoma floridae] 1.134 0.396 n y n ruditapes_c20281 -2.965 0.553 1.083 0.365 n y n ruditapes_c18902 ? 0.553 0 0.353 n y n ruditapes_c27642 ? 0.553 0 0.352 n y n ruditapes_c30835 ? 0.553 0 0.352 n y n ruditapes_c11481 -3.494 0.553 0.898 0.257 n y n ruditapes_c12108 -3.494 0.553 isoform d 0.898 0.257 n y n ruditapes_c19220 -4.003 0.553 0.786 0.196 n y n ruditapes_c20477 -5.003 0.553 0.664 0.133 n y n ruditapes_c8644 -6.671 0.553 0.562 0.084 n y n ruditapes_c7434 -8.895 0.553 0.5 0.056 n y n ruditapes_c10883 -? 0.553 0.352 0 n y n ruditapes_c30627 -? 0.553 0.352 0 n y n ruditapes_lrc36659 -? 0.553 0.352 0 n y n ruditapes_c5530 -1.144 0.554 45.744 39.972 n n n ruditapes2_c1090 -1.224 0.554 20.36 16.64 n n n ruditapes_lrc37516 -1.336 0.554 10.149 7.595 n n n ruditapes2_c1273 -1.347 0.554 9.645 7.16 n n n ruditapes_c10189 -1.355 0.554 9.271 6.841 n n n ruditapes2_lrc5941 -1.544 0.554 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 4.804 3.112 n y n ruditapes2_lrc4664 -1.685 0.554 3.465 2.057 n y n ruditapes_lrc38644 2.158 0.554 tubulin beta-2c chain /// 0006414 // translational elongation /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0003746 // translation elongation factor activity /// 0007018 // microtubule-based movement 0.811 1.75 n y n ruditapes_lrc33233 -1.846 0.554 malate dehydrogenase nad /// 0030060 // L-malate dehydrogenase activity /// 0044262 // cellular carbohydrate metabolic process /// 0006091 // generation of precursor metabolites and energy /// 0044248 // cellular catabolic process /// 0005829 // cytosol 2.62 1.419 n y n ruditapes_lrc34380 2.417 0.554 ribosomal protein s15 /// 0005840 // ribosome 0.587 1.418 n y n ruditapes_c15851 -1.921 0.554 2.358 1.228 n y n ruditapes2_lrc5722 -2.076 0.554 1.967 0.948 n y n ruditapes2_lrc4824 3.867 0.554 0.205 0.794 n y n ruditapes_c12640 4.497 0.554 0.157 0.704 n y n ruditapes_c16194 4.497 0.554 0.156 0.702 n y n ruditapes_c4169 7.42 0.554 heat shock protein 0.071 0.528 n y n ruditapes_c15238 -2.557 0.554 cg7874 cg7874- partial 1.33 0.52 n y n ruditapes_c10896 -2.83 0.554 1.147 0.405 n y n ruditapes_lrc33950 -2.891 0.554 1.113 0.385 n y n ruditapes_c28366 -2.965 0.554 1.077 0.363 n y n ruditapes_c30316 ? 0.554 0 0.35 n y n ruditapes_c23328 -3.614 0.554 0.861 0.238 n y n ruditapes_c21287 -4.448 0.554 0.719 0.162 n y n ruditapes_lrc13621 -5.003 0.554 0.661 0.132 n y n ruditapes2_lrc5808 -5.93 0.554 0.596 0.1 n y n ruditapes2_c2096 -11.119 0.554 0.462 0.042 n y n ruditapes2_lrc6276 -11.119 0.554 0.461 0.041 n y n ruditapes_c23776 -13.343 0.554 0.442 0.033 n y n ruditapes_c23641 -13.343 0.554 0.441 0.033 n y n ruditapes_c14275 -? 0.554 0.351 0 n y n ruditapes_c30460 -? 0.554 poly (adp-ribose) polymerase member 14 0.351 0 n y n ruditapes_c4014 -1.21 0.555 22.639 18.708 n n n ruditapes_lrc8906 -1.307 0.555 11.685 8.937 n n n ruditapes_c11031 -1.341 0.555 9.876 7.365 n n n ruditapes_s39619 1.43 0.555 4.412 6.308 n n n ruditapes_lrc27584 1.442 0.555 4.213 6.074 n n n ruditapes_c2598 1.478 0.555 3.659 5.406 n n n ruditapes_c1567 -1.413 0.555 von willebrand factor c domain containing 2 7.244 5.126 n n n ruditapes_c15568 -1.483 0.555 5.708 3.851 n n n ruditapes_c8913 -1.64 0.555 3.776 2.302 n y n ruditapes2_lrc3981 1.911 0.555 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 1.2 2.293 n y n ruditapes_c24958 -1.718 0.555 3.236 1.883 n y n ruditapes_c20305 -1.825 0.555 2.691 1.475 n y n ruditapes_c23807 2.371 0.555 0.617 1.462 n y n ruditapes_c28747 -2.001 0.555 2.131 1.065 n y n ruditapes_c10277 3.298 0.555 0.281 0.928 n y n ruditapes_s38912 -2.224 0.555 heavy polypeptide 1 "/// 0005868 // cytoplasmic dynein complex /// 0005794 // Golgi apparatus /// 0042623 // ATPase activity, coupled /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement /// 0007052 // mitotic spindle organization" 1.693 0.761 n y n ruditapes_c19282 -2.224 0.555 sjchgc04934 protein 1.69 0.76 n y n ruditapes_c10990 -2.335 0.555 temporarily assigned gene name family member (tag-308) 1.543 0.661 n y n ruditapes_c11089 -2.485 0.555 1.385 0.557 n y n ruditapes_c23354 -2.737 0.555 1.196 0.437 n y n ruditapes_c11906 ? 0.555 0 0.349 n y n ruditapes_c9589 ? 0.555 3-hydroxybutyrate dehydrogenase 0 0.349 n y n ruditapes_c13486 ? 0.555 grip1 associated protein 1 0 0.348 n y n ruditapes_c25613 ? 0.555 0 0.348 n y n ruditapes_c27933 ? 0.555 0 0.348 n y n ruditapes2_c2332 -11.119 0.555 0.459 0.041 n y n ruditapes_c21646 -13.343 0.555 0.439 0.033 n y n ruditapes_c27276 -15.566 0.555 0.425 0.027 n y n ruditapes_c18607 -? 0.555 0.349 0 n y n ruditapes_c28111 -? 0.555 0.349 0 n y n ruditapes_lrc22819 -? 0.555 0.349 0 n y n ruditapes_c23523 1.144 0.556 vdg3 [Mytilus edulis] 32.661 37.357 n n n ruditapes_lrc34867 -1.291 0.556 40s ribosomal protein s10 /// 0005840 // ribosome 12.821 9.933 n n n ruditapes_c31996 -1.298 0.556 12.285 9.464 n n n ruditapes_c19140 -1.437 0.556 6.609 4.6 n n n ruditapes_c11203 -1.442 0.556 6.482 4.494 n n n ruditapes_c17848 -1.489 0.556 5.557 3.733 n n n ruditapes_c14932 1.643 0.556 2.163 3.554 n y n ruditapes2_c1943 -1.508 0.556 5.244 3.478 n y n ruditapes2_c2401 -1.54 0.556 prohibitin 4.799 3.117 n y n ruditapes_c14204 -1.57 0.556 4.439 2.828 n y n ruditapes2_c1444 -1.586 0.556 mitochondrial ribosomal 4.261 2.686 n y n ruditapes_c16640 -1.591 0.556 4.207 2.644 n y n ruditapes_c21567 -1.597 0.556 4.144 2.594 n y n ruditapes2_c3895 -1.64 0.556 proteasome maturation protein 3.765 2.296 n y n ruditapes_c9835 -1.977 0.556 2.176 1.101 n y n ruditapes_c5529 -1.994 0.556 small ubiquitin-related modifier 3 precursor 2.131 1.069 n y n ruditapes_lrc32417 -2.072 0.556 gm2 activator protein 1.953 0.943 n y n ruditapes2_c2757 -2.224 0.556 ubiquitin-conjugating enzyme e2 variant 2 /// 0044267 // cellular protein metabolic process /// 0004842 // ubiquitin-protein ligase activity 1.686 0.758 n y n ruditapes_c29997 -2.224 0.556 1.686 0.758 n y n ruditapes_c9055 -2.309 0.556 1.571 0.68 n y n ruditapes_s39315 -2.347 0.556 cathepsin l 1.524 0.649 n y n ruditapes_c9643 -2.628 0.556 1.262 0.48 n y n ruditapes_c31665 -2.83 0.556 proline-serine-threonine phosphatase interacting protein 1 /// 0001725 // stress fiber /// 0019903 // protein phosphatase binding /// 0003779 // actin binding /// 0009987 // cellular process /// 0005826 // contractile ring 1.135 0.401 n y n ruditapes_lrc32533 -2.965 0.556 1.065 0.359 n y n ruditapes2_lrc4273 ? 0.556 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 0 0.347 n y n ruditapes_c30993 ? 0.556 0 0.347 n y n ruditapes_c1686 -3.614 0.556 mitochondrial ribosomal protein l3-llike protein 0.854 0.236 n y n ruditapes_c14004 -3.706 0.556 sperm autoantigenic protein 17 /// 0007338 // single fertilization /// 0007283 // spermatogenesis /// 0009987 // cellular process 0.832 0.224 n y n ruditapes_c25060 -3.706 0.556 0.832 0.224 n y n ruditapes_c19974 -4.003 0.556 0.776 0.194 n y n ruditapes2_lrc2974 -6.671 0.556 0.554 0.083 n y n ruditapes_c24441 -13.343 0.556 predicted protein [Nematostella vectensis] 0.437 0.033 n y n ruditapes_c6643 -? 0.556 0.347 0 n y n ruditapes2_lrc4518 -? 0.556 0.346 0 n y n ruditapes_c20082 -? 0.556 0.346 0 n y n ruditapes_c21133 1.195 0.557 18.412 22.008 n n n ruditapes_c7568 -1.233 0.557 18.724 15.188 n n n ruditapes_c9257 -1.394 0.557 7.719 5.539 n n n ruditapes_lrc15399 -1.449 0.557 6.296 4.344 n n n ruditapes2_c164 1.555 0.557 2.781 4.324 n y n ruditapes_lrc32200 -1.483 0.557 myosin heavy chain /// 0005524 // ATP binding /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0051015 // actin filament binding /// 0005863 // striated muscle thick filament 5.636 3.802 n n n ruditapes_c18250 -2.127 0.557 1.838 0.864 n y n ruditapes_c29429 3.822 0.557 0.207 0.79 n y n ruditapes_c13833 4.272 0.557 0.169 0.722 n y n ruditapes_c10432 -2.325 0.557 1.542 0.663 n y n ruditapes_c27532 -2.669 0.557 1.23 0.461 n y n ruditapes_c9016 ? 0.557 0 0.346 n y n ruditapes_c11058 ? 0.557 0 0.345 n y n ruditapes_c30255 ? 0.557 0 0.345 n y n ruditapes_lrc32645 ? 0.557 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 0 0.345 n y n ruditapes2_c1738 ? 0.557 methyltransferase type 11 0 0.344 n y n ruditapes_lrc32123 -3.494 0.557 0.877 0.251 n y n ruditapes_c4594 -7.783 0.557 sulfotransferase member 2 0.514 0.066 n y n ruditapes_c29548 -11.119 0.557 0.455 0.041 n y n ruditapes_c19378 -14.454 0.557 0.427 0.03 n y n ruditapes_lrc34557 -17.79 0.557 glutathione s-transferase /// 0005515 // protein binding 0.41 0.023 n y n ruditapes_c23577 -? 0.557 0.346 0 n y n ruditapes_s40168 -? 0.557 0.346 0 n y n ruditapes_lrc17971 -? 0.557 0.344 0 n y n ruditapes_c15890 1.111 0.558 51.968 57.736 n n n ruditapes_c24547 -1.267 0.558 14.691 11.6 n n n ruditapes_lrc34996 1.307 0.558 ribosomal protein l9 /// 0044444 // cytoplasmic part /// 0043232 // intracellular non-membrane-bounded organelle /// 0009987 // cellular process 7.978 10.429 n n n ruditapes_c19439 1.326 0.558 7.185 9.525 n n n ruditapes_lrc15579 -1.31 0.558 11.337 8.654 n n n ruditapes_c10389 -1.336 0.558 9.932 7.433 n n n ruditapes_lrc20084 -1.425 0.558 6.817 4.785 n n n ruditapes_c10454 1.619 0.558 2.279 3.689 n y n ruditapes_c12460 1.678 0.558 1.951 3.274 n y n ruditapes2_c3109 -1.547 0.558 trove domain protein /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0005515 // protein binding /// 0003723 // RNA binding /// 0006383 // transcription from RNA polymerase III promoter 4.659 3.012 n y n ruditapes2_c2071 -1.557 0.558 4.531 2.911 n y n ruditapes_c28201 -1.579 0.558 4.276 2.708 n y n ruditapes_c29373 -1.744 0.558 3.032 1.738 n y n ruditapes_c22163 -1.844 0.558 2.577 1.397 n y n ruditapes_c11184 -1.865 0.558 2.502 1.342 n y n ruditapes_c14962 2.623 0.558 0.466 1.222 n y n ruditapes_c13996 -1.937 0.558 2.271 1.172 n y n ruditapes_c24332 -2.135 0.558 1.812 0.849 n y n ruditapes_c23027 4.272 0.558 0.168 0.719 n y n ruditapes_lrc32843 -2.409 0.558 1.437 0.596 n y n ruditapes_c27534 -2.502 0.558 1.348 0.539 n y n ruditapes_c11 7.195 0.558 0.073 0.525 n y n ruditapes_c8372 ? 0.558 0 0.344 n y n ruditapes_c22201 ? 0.558 0 0.343 n y n ruditapes_c8511 ? 0.558 0 0.343 n y n ruditapes_c22984 -3.058 0.558 1.017 0.332 n y n ruditapes_c17504 -3.706 0.558 pr domain containing 12 "/// 0006355 // regulation of transcription, DNA-dependent /// 0022008 // neurogenesis /// 0005634 // nucleus /// 0003677 // DNA binding /// 0008270 // zinc ion binding" 0.823 0.222 n y n ruditapes_c8795 -3.706 0.558 0.823 0.222 n y n ruditapes_c13268 -4.818 0.558 0.665 0.138 n y n ruditapes_c9307 -5.337 0.558 ferric-chelate reductase 1 0.621 0.116 n y n ruditapes_lrc24204 -5.559 0.558 0.605 0.109 n y n ruditapes2_c2092 -17.79 0.558 0.408 0.023 n y n ruditapes_c16701 -1.181 0.559 29.092 24.626 n n n ruditapes_c19093 -1.332 0.559 10.066 7.557 n n n ruditapes2_lrc3952 -1.352 0.559 tandem repeat galectin /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 9.153 6.771 n n n ruditapes2_c3056 -1.369 0.559 8.464 6.181 n n n ruditapes2_lrc4728 -1.435 0.559 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 6.565 4.576 n n n ruditapes_c26970 1.54 0.559 2.879 4.435 n y n ruditapes_c1626 -1.492 0.559 5.436 3.645 n n n ruditapes_c26886 -1.524 0.559 4.935 3.238 n y n ruditapes_c10633 -1.572 0.559 4.349 2.767 n y n ruditapes_lrc32195 1.799 0.559 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 1.463 2.632 n y n ruditapes_c12424 -2.056 0.559 l _3 1.955 0.951 n y n ruditapes_c8326 -2.076 0.559 1.918 0.924 n y n ruditapes_lrc38636 3.597 0.559 0.231 0.829 n y n ruditapes_c24256 -2.347 0.559 adenosine deaminase-like /// 0003824 // catalytic activity /// 0009117 // nucleotide metabolic process 1.502 0.64 n y n ruditapes2_c1840 -2.471 0.559 1.375 0.556 n y n ruditapes_c18125 -2.891 0.559 1.084 0.375 n y n ruditapes_c1662 ? 0.559 0 0.342 n y n ruditapes_c20589 ? 0.559 0 0.341 n y n ruditapes_c23407 ? 0.559 0 0.341 n y n ruditapes_c23572 ? 0.559 0 0.341 n y n ruditapes_c8065 -3.494 0.559 ubiquitously transcribed sex (x y) chromosome tetratricopeptide repeat protein /// 0005488 // binding /// 0045596 // negative regulation of cell differentiation 0.868 0.248 n y n ruditapes_s40182 -3.558 0.559 0.855 0.24 n y n ruditapes_c30953 -3.558 0.559 0.852 0.24 n y n ruditapes_c12396 -4.003 0.559 0.765 0.191 n y n ruditapes_c28798 -6.671 0.559 isoform d 0.545 0.082 n y n ruditapes_c7952 -? 0.559 0.342 0 n y n ruditapes_c9840 -? 0.559 0.342 0 n y n ruditapes_lrc33694 1.16 0.56 60s ribosomal protein l10a /// 0044444 // cytoplasmic part /// 0007052 // mitotic spindle organization 26.219 30.411 n n n ruditapes2_c2571 -1.168 0.56 33.216 28.43 n n n ruditapes_c3752 -1.188 0.56 26.996 22.724 n n n ruditapes_c7262 -1.264 0.56 chaperonin containing subunit 5 /// 0005524 // ATP binding /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0008340 // determination of adult lifespan /// 0040011 // locomotion /// 0005737 // cytoplasm /// 0040035 // hermaphrodite genitalia development /// 0051082 // unfolded protein binding /// 0006457 // protein folding /// 0009792 // embryonic development ending in birth or egg hatching 14.852 11.753 n n n ruditapes_lrc25757 1.317 0.56 7.457 9.82 n n n ruditapes_c7295 1.754 0.56 1.608 2.82 n y n ruditapes_c29233 -1.592 0.56 4.126 2.592 n y n ruditapes2_c223 2.08 0.56 macrophage migration inhibitory factor 0.884 1.839 n y n ruditapes2_c443 -1.779 0.56 2.833 1.593 n y n ruditapes_c23964 2.473 0.56 0.536 1.327 n y n ruditapes2_c2524 -1.899 0.56 "calmodulin, putative [Ixodes scapularis]" 2.361 1.243 n y n ruditapes_lrc37160 2.848 0.56 0.379 1.08 n y n ruditapes_c1674 -2.432 0.56 1.398 0.575 n y n ruditapes_c19579 6.296 0.56 transcription factor ap4 0.088 0.555 n y n ruditapes2_c174 ? 0.56 protein 0 0.34 n y n ruditapes_c20007 ? 0.56 0 0.34 n y n ruditapes_c25476 ? 0.56 cg15117 cg15117-pa 0 0.34 n y n ruditapes_c27670 ? 0.56 0 0.34 n y n ruditapes_c19684 ? 0.56 tripartite motif-containing 56 0 0.339 n y n ruditapes_c21877 ? 0.56 0 0.339 n y n ruditapes_c19607 -3.058 0.56 1.007 0.329 n y n ruditapes_c17852 -3.113 0.56 0.983 0.316 n y n ruditapes_c21161 -3.706 0.56 0.816 0.22 n y n ruditapes_lrc32605 -4.13 0.56 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.74 0.179 n y n ruditapes2_lrc7623 -4.448 0.56 expressed hypothetical protein [Trichoplax adhaerens] 0.697 0.157 n y n ruditapes_lrc12549 -8.895 0.56 0.482 0.054 n y n ruditapes_c15299 -? 0.56 cd163 antigen /// 0016020 // membrane 0.34 0 n y n ruditapes_c23684 -? 0.56 0.339 0 n y n ruditapes_c255 -? 0.56 c1q and tumor necrosis factor related protein 3 0.339 0 n y n ruditapes2_c434 -1.2 0.561 24.098 20.087 n n n ruditapes2_lrc5196 -1.251 0.561 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 16.054 12.834 n n n ruditapes2_c1520 -1.272 0.561 13.984 10.995 n n n ruditapes_c20888 -1.328 0.561 10.192 7.672 n n n ruditapes2_c403 -1.338 0.561 9.711 7.26 n n n ruditapes_c19111 -1.38 0.561 8.028 5.818 n n n ruditapes_c2552 -1.414 0.561 6.993 4.945 n n n ruditapes_c9421 -1.417 0.561 hypothetical protein BRAFLDRAFT_122381 [Branchiostoma floridae] 6.898 4.866 n n n ruditapes2_lrc4901 -1.614 0.561 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 3.878 2.403 n y n ruditapes_c29309 -1.668 0.561 3.458 2.073 n y n ruditapes2_lrc5321 -1.693 0.561 3.287 1.942 n y n ruditapes_c26417 -1.701 0.561 3.243 1.907 n y n ruditapes_c25034 -1.736 0.561 3.038 1.75 n y n ruditapes_c17076 2.441 0.561 0.554 1.351 n y n ruditapes_c20627 -1.887 0.561 protein 2.386 1.265 n y n ruditapes_c23580 2.811 0.561 0.388 1.092 n y n ruditapes_c27948 2.998 0.561 0.335 1.006 n y n ruditapes_c18056 -2.059 0.561 1.933 0.939 n y n ruditapes_c11359 -2.224 0.561 1.646 0.74 n y n ruditapes_c19054 -2.224 0.561 1.644 0.739 n y n ruditapes_c12910 4.272 0.561 0.165 0.705 n y n ruditapes_c22282 -2.355 0.561 1.478 0.628 n y n ruditapes_c26343 -2.355 0.561 1.478 0.628 n y n ruditapes_c22173 -2.395 0.561 1.432 0.598 n y n ruditapes_c4985 -2.566 0.561 1.278 0.498 n y n ruditapes_c24802 -2.692 0.561 1.189 0.442 n y n ruditapes_c10881 -2.83 0.561 1.105 0.39 n y n ruditapes_c13302 -2.83 0.561 1.105 0.39 n y n ruditapes_c31060 ? 0.561 0 0.339 n y n ruditapes_c20856 ? 0.561 caprin family member 2 /// 0005737 // cytoplasm /// 0040008 // regulation of growth 0 0.338 n y n ruditapes_c24878 ? 0.561 0 0.338 n y n ruditapes_c25344 ? 0.561 0 0.338 n y n ruditapes_c26650 ? 0.561 0 0.338 n y n ruditapes_c20932 -3.058 0.561 1 0.327 n y n ruditapes_c8036 -5.93 0.561 0.573 0.097 n y n ruditapes_c24721 -8.895 0.561 0.478 0.054 n y n ruditapes_c8126 -11.119 0.561 0.446 0.04 n y n ruditapes_c7646 -15.566 0.561 gustatory receptor 0.411 0.026 n y n ruditapes2_c227 -? 0.561 0.338 0 n y n ruditapes_c22791 -? 0.561 0.338 0 n y n ruditapes_c26693 -? 0.561 0.338 0 n y n ruditapes2_c5457 1.43 0.562 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 4.253 6.083 n n n ruditapes_c16321 -1.455 0.562 6.009 4.129 n n n ruditapes2_c1729 1.732 0.562 1.678 2.907 n y n ruditapes_c13085 -1.563 0.562 4.383 2.805 n y n ruditapes2_c2408 -1.65 0.562 3.571 2.164 n y n ruditapes_c1184 -1.688 0.562 3.301 1.955 n y n ruditapes_s39301 -1.69 0.562 beta-tubulin /// 0006414 // translational elongation /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0003746 // translation elongation factor activity /// 0007018 // microtubule-based movement 3.29 1.946 n y n ruditapes_c26427 2.024 0.562 0.955 1.932 n y n ruditapes_c23992 -1.722 0.562 3.099 1.8 n y n ruditapes_c19009 -1.937 0.562 2.227 1.15 n y n ruditapes_c30762 2.698 0.562 0.426 1.15 n y n ruditapes2_lrc4420 2.979 0.562 0.338 1.006 n y n ruditapes_c24856 -2.038 0.562 scavenger receptor class member 1 1.962 0.963 n y n ruditapes_c8022 -2.09 0.562 srb7p: rna polymerase ii holoenzyme "/// 0006355 // regulation of transcription, DNA-dependent /// 0006366 // transcription from RNA polymerase II promoter /// 0048731 // system development /// 0016043 // cellular component organization /// 0030528 // transcription regulator activity /// 0016591 // DNA-directed RNA polymerase II, holoenzyme" 1.858 0.889 n y n ruditapes2_lrc5968 3.418 0.562 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.252 0.86 n y n ruditapes_s35160 -2.224 0.562 1.632 0.734 n y n ruditapes_c26913 -2.402 0.562 1.418 0.591 n y n ruditapes_c12576 -2.594 0.562 1.246 0.48 n y n ruditapes_c13395 ? 0.562 0 0.337 n y n ruditapes_c28560 ? 0.562 0 0.337 n y n ruditapes_c29740 ? 0.562 nad kinase /// 0005488 // binding /// 0009117 // nucleotide metabolic process /// 0016301 // kinase activity 0 0.337 n y n ruditapes_c8184 -4.13 0.562 dna-mediated transposase 0.732 0.177 n y n ruditapes_c14310 -5.003 0.562 0.634 0.127 n y n ruditapes_c26091 -8.895 0.562 0.477 0.054 n y n ruditapes_s39066 -11.119 0.562 0.444 0.04 n y n ruditapes_c11861 -26.685 0.562 0.377 0.014 n y n ruditapes_c26318 -? 0.562 0.336 0 n y n ruditapes_c16313 -1.342 0.563 9.395 6.999 n n n ruditapes_c5847 -1.359 0.563 8.685 6.391 n n n ruditapes_c9742 1.574 0.563 2.541 3.999 n y n ruditapes_c7896 -1.563 0.563 4.354 2.786 n y n ruditapes_c29299 1.842 0.563 1.316 2.423 n y n ruditapes2_c2792 -1.659 0.563 3.48 2.097 n y n ruditapes_c18538 -1.668 0.563 3.417 2.049 n y n ruditapes_lrc34404 -1.823 0.563 mitochondrial ubiquinol cytochrome c reductase complex 2.59 1.421 n y n ruditapes_s38624 2.698 0.563 0.424 1.143 n y n ruditapes_c14565 2.788 0.563 0.391 1.091 n y n ruditapes_c2572 -2.038 0.563 1.959 0.961 n y n ruditapes_c22562 -2.224 0.563 1.63 0.733 n y n ruditapes_lrc34521 -2.224 0.563 "PREDICTED: similar to GF10534, partial [Hydra magnipapillata]" 1.63 0.733 n y n ruditapes_c24495 ? 0.563 0 0.334 n y n ruditapes_s34720 ? 0.563 0 0.334 n y n ruditapes_s39153 -3.892 0.563 0.767 0.197 n y n ruditapes_lrc36064 -4.13 0.563 0.73 0.177 n y n ruditapes_c25626 -? 0.563 0.335 0 n y n ruditapes_c26628 -? 0.563 0.335 0 n y n ruditapes_c3269 -? 0.563 0.335 0 n y n ruditapes_c21737 -? 0.563 0.334 0 n y n ruditapes_lrc36903 1.188 0.564 19.141 22.737 n n n ruditapes_c13633 -1.378 0.564 7.951 5.769 n n n ruditapes_c25391 -1.388 0.564 aer61 glycosyltransferase /// 0016740 // transferase activity 7.639 5.503 n n n ruditapes2_c3454 -1.549 0.564 sialic acid binding lectin /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 4.492 2.9 n y n ruditapes_c30727 -1.549 0.564 4.492 2.9 n y n ruditapes_c11744 -1.906 0.564 2.287 1.2 n y n ruditapes_c14733 -1.946 0.564 2.178 1.119 n y n ruditapes_c14518 -2.131 0.564 1.761 0.826 n y n ruditapes2_lrc4292 -2.224 0.564 nadh dehydrogenase 1 alpha subcomplex subunit 6 "/// 0003954 // NADH dehydrogenase activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0005747 // mitochondrial respiratory chain complex I" 1.615 0.726 n y n ruditapes_c17841 4.272 0.564 dipeptidase 1 /// 0005488 // binding /// 0008238 // exopeptidase activity /// 0008237 // metallopeptidase activity /// 0044464 // cell part 0.163 0.694 n y n ruditapes_c9004 6.745 0.564 0.078 0.526 n y n ruditapes_c31084 -2.527 0.564 1.287 0.509 n y n ruditapes2_c2619 7.195 0.564 0.071 0.508 n y n ruditapes_c28867 8.994 0.564 glioma tumor suppressor candidate region gene 2 isoform 2 /// 0005622 // intracellular 0.052 0.467 n y n ruditapes_c25537 -2.891 0.564 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 1.061 0.367 n y n ruditapes_c23425 ? 0.564 0 0.333 n y n ruditapes_c8808 ? 0.564 0 0.333 n y n ruditapes_c29508 -3.706 0.564 0.797 0.215 n y n ruditapes_c10192 -4.003 0.564 0.745 0.186 n y n ruditapes_c9403 -4.448 0.564 0.683 0.154 n y n ruditapes_c28856 -5.189 0.564 metal-binding protein 0.612 0.118 n y n ruditapes_c28216 -6.671 0.564 0.533 0.08 n y n ruditapes_c23169 -8.895 0.564 0.471 0.053 n y n ruditapes2_c1809 -12.231 0.564 0.427 0.035 n y n ruditapes2_c1198 -? 0.564 0.333 0 n y n ruditapes_c10925 -? 0.564 0.333 0 n y n ruditapes_c25585 -? 0.564 0.333 0 n y n ruditapes_c30091 -? 0.564 0.333 0 n y n ruditapes_c17211 1.125 0.565 caveolin 3 /// 0044444 // cytoplasmic part /// 0000267 // cell fraction /// 0048519 // negative regulation of biological process /// 0030154 // cell differentiation /// 0006873 // cellular ion homeostasis /// 0032989 // cellular component morphogenesis /// 0005515 // protein binding /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0051179 // localization /// 0050793 // regulation of developmental process /// 0043086 // negative regulation of catalytic activity /// 0008016 // regulation of heart contraction /// 0044459 // plasma membrane part /// 0051128 // regulation of cellular component organization 40.611 45.671 n n n ruditapes2_c4055 -1.29 0.565 12.274 9.514 n n n ruditapes_c9059 -1.326 0.565 10.052 7.58 n n n ruditapes_c22881 -1.331 0.565 9.848 7.399 n n n ruditapes_c3903 -1.358 0.565 8.666 6.383 n n n ruditapes_c2734 -1.419 0.565 6.715 4.732 n n n ruditapes_c29983 -1.478 0.565 5.486 3.712 n n n ruditapes_c17254 1.616 0.565 2.223 3.593 n y n ruditapes_c25083 1.686 0.565 1.839 3.102 n y n ruditapes_c23826 -1.564 0.565 4.304 2.752 n y n ruditapes_c17139 -1.617 0.565 3.788 2.342 n y n ruditapes_c19627 -1.661 0.565 electron transfer flavoprotein subunit mitochondrial precursor /// 0005811 // lipid particle /// 0007443 // Malpighian tubule morphogenesis /// 0007424 // open tracheal system development /// 0008258 // head involution /// 0002009 // morphogenesis of an epithelium 3.439 2.071 n y n ruditapes_c15605 -1.668 0.565 cg8675-pa 3.391 2.033 n y n ruditapes_c16220 -1.701 0.565 3.182 1.871 n y n ruditapes_c25970 2.149 0.565 0.779 1.674 n y n ruditapes_c30923 -2.293 0.565 1.519 0.663 n y n ruditapes_lrc33298 -2.355 0.565 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 1.444 0.613 n y n ruditapes_c17955 6.745 0.565 0.077 0.523 n y n ruditapes_c30131 ? 0.565 0 0.332 n y n ruditapes_c30266 ? 0.565 0 0.332 n y n ruditapes_c5048 ? 0.565 0 0.331 n y n ruditapes_lrc9110 -3.336 0.565 0.885 0.265 n y n ruditapes_lrc38819 -3.494 0.565 0.844 0.241 n y n ruditapes_c14379 -11.119 0.565 0.437 0.039 n y n ruditapes_c7636 -? 0.565 0.332 0 n y n ruditapes_c5460 -? 0.565 0.331 0 n y n ruditapes2_c2884 1.238 0.566 12.25 15.161 n n n ruditapes_c17902 1.267 0.566 9.906 12.551 n n n ruditapes_c30906 1.34 0.566 6.392 8.563 n n n ruditapes_lrc30206 1.372 0.566 transcription factor btf3 5.417 7.431 n n n ruditapes_c8669 -1.429 0.566 6.456 4.519 n n n ruditapes_c7886 -1.455 0.566 5.889 4.048 n n n ruditapes_c27629 -1.553 0.566 4.394 2.829 n y n ruditapes_c21413 -1.588 0.566 4.026 2.535 n y n ruditapes_c465 -1.66 0.566 3.433 2.068 n y n ruditapes_c24194 -1.711 0.566 3.093 1.808 n y n ruditapes_c1824 -1.866 0.566 histidine triad nucleotide binding protein 1 /// 0005576 // extracellular region /// 0005739 // mitochondrion /// 0016301 // kinase activity 2.397 1.284 n y n ruditapes_c12562 2.608 0.566 0.453 1.182 n y n ruditapes2_c1545 -1.922 0.566 2.22 1.155 n y n ruditapes_c22458 -2.113 0.566 1.782 0.843 n y n ruditapes_c21554 -2.127 0.566 1.75 0.823 n y n ruditapes_s39073 -2.224 0.566 trove domain member 2 1.602 0.721 n y n ruditapes_c16856 -2.409 0.566 vanin 1 precursor "/// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides /// 0006952 // defense response /// 0016020 // membrane /// 0008152 // metabolic process /// 0009987 // cellular process" 1.379 0.572 n y n ruditapes_c31101 ? 0.566 0 0.33 n y n ruditapes2_c1736 ? 0.566 acyl-coenzyme a binding domain containing 3 0 0.329 n y n ruditapes_c7278 ? 0.566 0 0.329 n y n ruditapes_c29954 -3.177 0.566 0.931 0.293 n y n ruditapes_c20186 -3.336 0.566 0.882 0.264 n y n ruditapes_c22362 -4.448 0.566 0.677 0.152 n y n ruditapes2_c1620 -6.227 0.566 0.546 0.088 n y n ruditapes_c21559 -11.119 0.566 0.435 0.039 n y n ruditapes_c5069 -15.566 0.566 0.401 0.026 n y n ruditapes_c10712 -? 0.566 0.33 0 n y n ruditapes_c13006 -? 0.566 0.33 0 n y n ruditapes2_c592 1.147 0.567 29.571 33.917 n n n ruditapes_c12785 1.251 0.567 10.993 13.756 n n n ruditapes2_c3169 1.371 0.567 plasma kallikrein b1 precursor /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity /// 0044464 // cell part 5.403 7.408 n n n ruditapes_c15917 -1.352 0.567 translation initiation factor eif-2b subunit alpha /// 0014003 // oligodendrocyte development /// 0005624 // membrane fraction /// 0019003 // GDP binding /// 0005850 // eukaryotic translation initiation factor 2 complex /// 0009749 // response to glucose stimulus /// 0005886 // plasma membrane /// 0005525 // GTP binding /// 0005515 // protein binding /// 0032057 // negative regulation of translational initiation in response to stress /// 0005625 // soluble fraction /// 0003743 // translation initiation factor activity /// 0005085 // guanyl-nucleotide exchange factor activity /// 0009408 // response to heat /// 0043434 // response to peptide hormone stimulus /// 0005851 // eukaryotic translation initiation factor 2B complex 8.805 6.511 n n n ruditapes_c17221 -1.449 0.567 5.997 4.139 n n n ruditapes_lrc34477 -1.548 0.567 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 4.439 2.869 n y n ruditapes_lrc7760 -1.575 0.567 4.126 2.62 n y n ruditapes_s37808 2.099 0.567 60s ribosomal protein l10a /// 0030529 // ribonucleoprotein complex /// 0044238 // primary metabolic process /// 0010467 // gene expression /// 0034960 // cellular biopolymer metabolic process 0.828 1.737 n y n ruditapes_c1564 -1.73 0.567 2.983 1.725 n y n ruditapes_c12935 -1.814 0.567 2.573 1.418 n y n ruditapes_c29706 3.035 0.567 0.316 0.96 n y n ruditapes_c24308 3.448 0.567 0.241 0.83 n y n ruditapes_c32038 -2.32 0.567 1.473 0.635 n y n ruditapes_c19685 -2.965 0.567 1.007 0.34 n y n ruditapes2_c421 ? 0.567 0 0.328 n y n ruditapes_c13378 ? 0.567 alpha-glucosidase 0 0.328 n y n ruditapes_c27146 ? 0.567 0 0.328 n y n ruditapes_c14602 ? 0.567 0 0.327 n y n ruditapes_c15425 ? 0.567 0 0.327 n y n ruditapes_c22262 ? 0.567 axonemal dynein heavy chain 7 /// 0005524 // ATP binding /// 0005929 // cilium /// 0001539 // ciliary or flagellar motility /// 0016887 // ATPase activity /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process /// 0005874 // microtubule /// 0005858 // axonemal dynein complex /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 0 0.327 n y n ruditapes_c22419 -4.003 0.567 0.733 0.183 n y n ruditapes_c10285 -5.93 0.567 0.558 0.094 n y n ruditapes_c19676 -6.671 0.567 0.523 0.078 n y n ruditapes_c19228 -? 0.567 0.328 0 n y n ruditapes_c37285 -1.246 0.568 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity /// 0044464 // cell part 16.063 12.896 n n n ruditapes_c3786 1.307 0.568 7.605 9.938 n n n ruditapes2_c2159 1.308 0.568 7.556 9.884 n n n ruditapes_c22244 -1.506 0.568 4.976 3.305 n y n ruditapes2_c1014 -1.531 0.568 4.629 3.023 n y n ruditapes_c25385 2.044 0.568 jerky homolog-like /// 0043229 // intracellular organelle 0.896 1.831 n y n ruditapes_c18712 2.044 0.568 0.894 1.827 n y n ruditapes_c154 2.12 0.568 0.798 1.691 n y n ruditapes_c8998 -1.754 0.568 2.83 1.613 n y n ruditapes_lrc19250 -1.803 0.568 2.609 1.447 n y n ruditapes_c17911 -1.853 0.568 2.422 1.307 n y n ruditapes_c25238 2.762 0.568 0.39 1.078 n y n ruditapes_c26389 2.998 0.568 0.323 0.969 n y n ruditapes_c28817 -2.048 0.568 cdc5 cell division cycle 5-like ( pombe) /// 0016607 // nuclear speck /// 0019904 // protein domain specific binding /// 0006350 // transcription /// 0016070 // RNA metabolic process 1.885 0.92 n y n ruditapes2_lrc3976 -2.335 0.568 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 1.443 0.618 n y n ruditapes_c20015 6.745 0.568 0.076 0.514 n y n ruditapes_c33091 10.792 0.568 0.04 0.431 n y n ruditapes_c14787 -2.78 0.568 1.096 0.394 n y n ruditapes_c12957 -2.965 0.568 1.001 0.338 n y n ruditapes_c10879 ? 0.568 0 0.325 n y n ruditapes_lrc32844 -5.559 0.568 ppia protein 0.574 0.103 n y n ruditapes_c10797 -7.783 0.568 0.487 0.063 n y n ruditapes_c13476 -7.783 0.568 0.487 0.063 n y n ruditapes_c23767 -8.895 0.568 0.462 0.052 n y n ruditapes_c10638 -? 0.568 0.326 0 n y n ruditapes2_lrc5654 1.039 0.569 tubulin alpha-1 chain "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 307.912 320.069 n n n ruditapes_c1338 1.096 0.569 64.388 70.54 n n n ruditapes_c12073 1.264 0.569 9.923 12.546 n n n ruditapes_s38541 -1.288 0.569 60s ribosomal protein l32 12.171 9.449 n n n ruditapes_lrc35681 -1.388 0.569 60s ribosomal protein l9 /// 0005737 // cytoplasm 7.43 5.353 n n n ruditapes_c19481 -1.406 0.569 6.914 4.917 n n n ruditapes_c25349 -1.483 0.569 predicted protein [Nematostella vectensis] 5.302 3.576 n n n ruditapes2_c1125 -1.488 0.569 5.217 3.507 n n n ruditapes_c20601 1.626 0.569 2.117 3.442 n y n ruditapes2_c2271 -1.546 0.569 4.425 2.863 n y n ruditapes_c29812 -1.553 0.569 4.345 2.798 n y n ruditapes_c7987 -1.675 0.569 acetylserotonin o-methyltransferase-like 3.265 1.949 n y n ruditapes_c30064 -1.759 0.569 2.795 1.588 n y n ruditapes_c18039 -1.769 0.569 gaba receptor-associated 2 /// 0050811 // GABA receptor binding /// 0015031 // protein transport /// 0005624 // membrane fraction /// 0000149 // SNARE binding /// 0006508 // proteolysis /// 0006891 // intra-Golgi vesicle-mediated transport /// 0000421 // autophagic vacuole membrane /// 0032781 // positive regulation of ATPase activity /// 0048487 // beta-tubulin binding /// 0005829 // cytosol /// 0051117 // ATPase binding /// 0004252 // serine-type endopeptidase activity /// 0008017 // microtubule binding /// 0000139 // Golgi membrane /// 0006914 // autophagy /// 0004872 // receptor activity 2.751 1.555 n y n ruditapes_c6160 -1.769 0.569 2.745 1.552 n y n ruditapes_c22845 -1.946 0.569 2.118 1.088 n y n ruditapes_c1283 -2.313 0.569 gem-associated protein 7 1.464 0.633 n y n ruditapes_c12290 -2.446 0.569 1.327 0.542 n y n ruditapes_c20961 6.745 0.569 0.076 0.51 n y n ruditapes_lrc16278 -2.78 0.569 1.085 0.39 n y n ruditapes_c12264 ? 0.569 aristaless related homeobox "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0008283 // cell proliferation /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0048666 // neuron development /// 0021843 // substrate-independent telencephalic tangential interneuron migration /// 0021772 // olfactory bulb development" 0 0.325 n y n ruditapes_c15728 ? 0.569 0 0.325 n y n ruditapes_c26533 ? 0.569 0 0.325 n y n ruditapes_lrc13947 ? 0.569 0 0.325 n y n ruditapes_lrc27621 ? 0.569 0 0.325 n y n ruditapes_c17613 ? 0.569 0 0.324 n y n ruditapes_c20990 -3.558 0.569 0.812 0.228 n y n ruditapes_c23158 -4.003 0.569 signal transducer and activator of transcription 5b /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0005488 // binding /// 0045639 // positive regulation of myeloid cell differentiation /// 0030098 // lymphocyte differentiation /// 0048821 // erythrocyte development 0.727 0.182 n y n ruditapes_c5353 -5.189 0.569 0.597 0.115 n y n ruditapes_lrc33413 -5.559 0.569 0.571 0.103 n y n ruditapes_c4869 -? 0.569 0.325 0 n y n ruditapes_c22592 -? 0.569 0.324 0 n y n ruditapes_c25481 -? 0.569 0.324 0 n y n ruditapes_c17067 -1.205 0.57 21.922 18.186 n n n ruditapes2_lrc6050 -1.241 0.57 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.402 13.213 n n n ruditapes_c14422 -1.286 0.57 12.198 9.483 n n n ruditapes_c25132 -1.436 0.57 6.157 4.287 n n n ruditapes2_c2883 -1.438 0.57 6.1 4.242 n n n ruditapes_c9533 -1.47 0.57 5.479 3.727 n n n ruditapes_c28107 -1.519 0.57 4.734 3.116 n y n ruditapes_c19611 -1.557 0.57 4.281 2.75 n y n ruditapes2_c630 -1.628 0.57 peptidoglycan binding domain-containing protein /// 0016787 // hydrolase activity 3.59 2.205 n y n ruditapes_lrc21046 1.911 0.57 1.11 2.122 n y n ruditapes_c9080 -1.706 0.57 nucleoside-triphosphatase c1orf57 /// 0017111 // nucleoside-triphosphatase activity 3.068 1.798 n y n ruditapes_c9426 2.069 0.57 0.852 1.763 n y n ruditapes_c9483 -1.77 0.57 glutaryl-coenzyme a dehydrogenase /// 0005739 // mitochondrion /// 0003995 // acyl-CoA dehydrogenase activity /// 0005515 // protein binding 2.724 1.539 n y n ruditapes_c14698 2.248 0.57 0.661 1.487 n y n ruditapes_s37287 -2.053 0.57 1.856 0.904 n y n ruditapes_c8812 3.298 0.57 methylmalonic aciduria (cobalamin deficiency) cbld with homocystinuria 0.261 0.86 n y n ruditapes2_c704 -2.175 0.57 1.637 0.753 n y n ruditapes_c10766 -2.224 0.57 1.569 0.706 n y n ruditapes_c28339 -2.32 0.57 1.445 0.623 n y n ruditapes_s38861 -2.891 0.57 nadh dehydrogenase 1 beta 8kda 1.024 0.354 n y n ruditapes_s35391 -2.965 0.57 nadh dehydrogenase iron-sulfur protein 5 0.992 0.335 n y n ruditapes_lrc31735 ? 0.57 0 0.323 n y n ruditapes2_c774 ? 0.57 asialoglycoprotein receptor 1 /// 0005515 // protein binding /// 0009987 // cellular process 0 0.322 n y n ruditapes_c4208 -3.41 0.57 0.844 0.248 n y n ruditapes_c24911 -? 0.57 0.323 0 n y n ruditapes_c12441 -? 0.57 0.322 0 n y n ruditapes_c21509 -? 0.57 0.322 0 n y n ruditapes2_c241 1.139 0.571 32.16 36.63 n n n ruditapes_c3218 1.304 0.571 7.644 9.966 n n n ruditapes_c14409 1.304 0.571 7.584 9.893 n n n ruditapes_c25128 -1.318 0.571 10.17 7.714 n n n ruditapes_c24387 1.824 0.571 leucine rich repeat containing 40 1.31 2.389 n y n ruditapes_c14590 -1.658 0.571 3.348 2.019 n y n ruditapes2_c775 -1.723 0.571 2.943 1.707 n y n ruditapes2_c172 -1.779 0.571 2.668 1.5 n y n ruditapes_c30705 2.634 0.571 0.431 1.135 n y n ruditapes_c23960 2.848 0.571 0.357 1.018 n y n ruditapes_c19782 2.923 0.571 0.338 0.988 n y n ruditapes_c31614 -2.1 0.571 1.753 0.834 n y n ruditapes_c27301 3.485 0.571 0.232 0.808 n y n ruditapes2_lrc6225 -2.15 0.571 ependymin related protein-1 precursor 1.672 0.778 n y n ruditapes_c27369 -2.303 0.571 1.458 0.633 n y n ruditapes_lrc14097 5.621 0.571 0.099 0.556 n y n ruditapes_c27092 -2.616 0.571 1.176 0.45 n y n ruditapes_c14771 -2.737 0.571 1.102 0.403 n y n ruditapes_lrc24403 -3.336 0.571 0.86 0.258 n y n ruditapes2_c960 -3.459 0.571 acyl- synthetase long-chain family member 1 /// 0008152 // metabolic process /// 0016874 // ligase activity 0.827 0.239 n y n ruditapes_c15624 -3.706 0.571 0.772 0.208 n y n ruditapes2_c758 -5.083 0.571 0.598 0.118 n y n ruditapes_c12336 -5.93 0.571 0.544 0.092 n y n ruditapes_c26613 -20.014 0.571 temporarily assigned gene name family member (tag-308) 0.374 0.019 n y n ruditapes_c17712 -? 0.571 0.321 0 n y n ruditapes_c30784 -? 0.571 0.321 0 n y n ruditapes_c14134 1.271 0.572 9.333 11.866 n n n ruditapes_c10873 1.674 0.572 1.831 3.065 n y n ruditapes_c12348 -1.621 0.572 3.618 2.231 n y n ruditapes_c21134 2.024 0.572 0.904 1.83 n y n ruditapes_c31079 2.024 0.572 0.903 1.828 n y n ruditapes_s39485 -1.73 0.572 2.902 1.678 n y n ruditapes_c18510 -1.747 0.572 2.808 1.607 n y n ruditapes_c36236 2.473 0.572 thyroid hormone receptor interactor 3 /// 0005488 // binding 0.505 1.248 n y n ruditapes_c3638 -1.89 0.572 2.248 1.189 n y n ruditapes2_c136 -1.994 0.572 ferritin heavy chain /// 0046914 // transition metal ion binding 1.961 0.984 n y n ruditapes_c15315 -2.316 0.572 arylsulfatase member h /// 0005624 // membrane fraction /// 0016020 // membrane /// 0006629 // lipid metabolic process /// 0005783 // endoplasmic reticulum /// 0004065 // arylsulfatase activity 1.433 0.619 n y n ruditapes_lrc32670 7.645 0.572 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0019674 // NAD metabolic process /// 0006107 // oxaloacetate metabolic process /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0004470 // malic enzyme activity 0.062 0.476 n y n ruditapes_lrc37282 -2.965 0.572 0.985 0.332 n y n ruditapes_c2939 ? 0.572 0 0.319 n y n ruditapes_lrc27117 ? 0.572 wsc domain protein 0 0.319 n y n ruditapes_s38082 ? 0.572 0 0.319 n y n ruditapes2_c2038 -3.212 0.572 0.89 0.277 n y n ruditapes2_c2946 -6.671 0.572 0.51 0.076 n y n ruditapes_c18526 -6.671 0.572 0.51 0.076 n y n ruditapes_c21487 -6.671 0.572 fas -associated via death domain 0.51 0.076 n y n ruditapes_c14457 -7.783 0.572 0.475 0.061 n y n ruditapes_c26541 -8.895 0.572 0.451 0.051 n y n ruditapes_c19314 -11.119 0.572 0.422 0.038 n y n ruditapes_c14256 -? 0.572 0.32 0 n y n ruditapes_c30759 -? 0.572 0.32 0 n y n ruditapes_c1452 1.115 0.573 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 45.378 50.577 n n n ruditapes_c4153 -1.164 0.573 32.377 27.807 n n n ruditapes2_lrc3567 -1.182 0.573 26.931 22.793 n n n ruditapes_c12295 1.277 0.573 8.961 11.44 n n n ruditapes2_c1214 1.297 0.573 7.851 10.184 n n n ruditapes_c15494 1.312 0.573 7.182 9.423 n n n ruditapes_c5357 -1.396 0.573 7.044 5.045 n n n ruditapes_c3680 -1.434 0.573 nadh dehydrogenase 1 beta 8kda 6.111 4.262 n n n ruditapes_lrc34053 1.883 0.573 1.151 2.168 n y n ruditapes_c26131 -1.725 0.573 2.905 1.684 n y n ruditapes2_c282 2.642 0.573 39s ribosomal protein mitochondrial precursor /// 0005622 // intracellular 0.424 1.12 n y n ruditapes_lrc39615 3.26 0.573 0.263 0.858 n y n ruditapes_c9906 -2.141 0.573 1.665 0.777 n y n ruditapes2_c3023 5.171 0.573 0.112 0.578 n y n ruditapes_c17622 6.296 0.573 essential meiotic endonuclease 1 homolog 1 ( pombe) 0.082 0.518 n y n ruditapes_lrc37002 -2.557 0.573 1.207 0.472 n y n ruditapes_c22171 8.094 0.573 0.057 0.463 n y n ruditapes_c11183 ? 0.573 nap homolog 3a 0 0.318 n y n ruditapes_c17447 ? 0.573 0 0.317 n y n ruditapes_lrc24665 ? 0.573 0 0.317 n y n ruditapes_s40010 -3.336 0.573 ferritin subunit 0.849 0.255 n y n ruditapes_c30540 -3.614 0.573 0.783 0.217 n y n ruditapes_c12044 -11.119 0.573 0.42 0.038 n y n ruditapes_c13602 -? 0.573 0.318 0 n y n ruditapes_c17245 -? 0.573 0.318 0 n y n ruditapes_c18483 -? 0.573 0.317 0 n y n ruditapes_c25984 -? 0.573 0.317 0 n y n ruditapes_c26604 -? 0.573 0.317 0 n y n ruditapes_c28087 -? 0.573 0.317 0 n y n ruditapes_c9773 1.144 0.574 29.475 33.728 n n n ruditapes_c7560 1.175 0.574 20.641 24.256 n n n ruditapes_c29879 -1.217 0.574 19.525 16.05 n n n ruditapes_c2490 -1.259 0.574 14.231 11.307 n n n ruditapes_c3439 -1.276 0.574 cytochrome c-1 12.739 9.984 n n n ruditapes_c29197 -1.308 0.574 10.615 8.117 n n n ruditapes2_c3746 1.474 0.574 3.366 4.963 n n n ruditapes_c9419 -1.404 0.574 6.82 4.859 n n n ruditapes_c20536 -1.411 0.574 6.603 4.679 n n n ruditapes_c30403 1.649 0.574 pa2g4 protein "/// 0044267 // cellular protein metabolic process /// 0003700 // transcription factor activity /// 0030529 // ribonucleoprotein complex /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0008238 // exopeptidase activity /// 0005515 // protein binding /// 0007050 // cell cycle arrest /// 0045892 // negative regulation of transcription, DNA-dependent" 1.939 3.197 n y n ruditapes2_lrc4737 1.709 0.574 cytochrome c oxidase subunit viic 1.66 2.837 n y n ruditapes_c2605 -1.735 0.574 isoform a 2.843 1.639 n y n ruditapes_c6336 -1.962 0.574 2.018 1.029 n y n ruditapes2_c3328 4.497 0.574 universal stress protein 0.141 0.633 n y n ruditapes_c18646 -2.594 0.574 1.172 0.452 n y n ruditapes_c17405 -2.83 0.574 1.033 0.365 n y n ruditapes_s37125 ? 0.574 0 0.317 n y n ruditapes_c24189 ? 0.574 0 0.316 n y n ruditapes_c24669 ? 0.574 0 0.316 n y n ruditapes_c25212 ? 0.574 0 0.316 n y n ruditapes_lrc37331 ? 0.574 ppia protein 0 0.316 n y n ruditapes_c20373 -3.058 0.574 0.933 0.305 n y n ruditapes_c14420 -4.003 0.574 0.706 0.176 n y n ruditapes_c15344 -7.783 0.574 fanconi complementation group m /// 0006259 // DNA metabolic process /// 0003676 // nucleic acid binding /// 0000166 // nucleotide binding /// 0005622 // intracellular /// 0004386 // helicase activity 0.472 0.061 n y n ruditapes_c31783 -10.007 0.574 0.43 0.043 n y n ruditapes_c9735 -1.198 0.575 22.766 18.998 n n n ruditapes_c19472 -1.239 0.575 polymerase iii (dna directed) polypeptide 155kda "/// 0006351 // transcription, DNA-dependent /// 0003899 // DNA-directed RNA polymerase activity /// 0005666 // DNA-directed RNA polymerase III complex /// 0032549 // ribonucleoside binding /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0000287 // magnesium ion binding" 16.204 13.076 n n n ruditapes_c1225 1.432 0.575 dolichyl-diphosphooligosaccharide-protein glycosyltransferase /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0006496 // protein amino acid terminal N-glycosylation /// 0005515 // protein binding /// 0034097 // response to cytokine stimulus /// 0016021 // integral to membrane /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity /// 0005792 // microsome /// 0042110 // T cell activation 3.955 5.663 n n n ruditapes_c17732 -1.462 0.575 5.492 3.757 n n n ruditapes_c16864 1.665 0.575 1.843 3.068 n y n ruditapes_c24560 -1.568 0.575 4.042 2.578 n y n ruditapes_c11272 -1.577 0.575 ets homologous factor "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus" 3.952 2.506 n y n ruditapes2_c2866 -1.588 0.575 3.85 2.424 n y n ruditapes_c11675 -1.77 0.575 2.661 1.504 n y n ruditapes_c30009 -1.888 0.575 2.213 1.172 n y n ruditapes2_c124 2.96 0.575 potassium channel tetramerisation domain containing 7 /// 0016020 // membrane 0.32 0.947 n y n ruditapes_c1374 -2.038 0.575 1.834 0.9 n y n ruditapes_c4802 -2.08 0.575 mitochondrial malic enzyme 2 "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005488 // binding /// 0008152 // metabolic process" 1.757 0.845 n y n ruditapes_c26256 -2.144 0.575 1.646 0.768 n y n ruditapes_c29160 -2.224 0.575 1.528 0.687 n y n ruditapes_c20732 4.272 0.575 0.154 0.658 n y n ruditapes_c5016 4.272 0.575 0.153 0.655 n y n ruditapes2_c2204 7.645 0.575 0.061 0.469 n y n ruditapes_c14189 ? 0.575 0 0.315 n y n ruditapes_c14072 ? 0.575 0 0.314 n y n ruditapes_c27876 -3.212 0.575 0.878 0.273 n y n ruditapes_c15215 -3.336 0.575 0.84 0.252 n y n ruditapes_c29915 -3.706 0.575 0.756 0.204 n y n ruditapes_c7729 -5.189 0.575 0.58 0.112 n y n ruditapes_c15789 -8.895 0.575 0.445 0.05 n y n ruditapes_c3134 -? 0.575 antimicrobial peptide hydramacin 0.315 0 n y n ruditapes_c4730 -? 0.575 0.315 0 n y n ruditapes_c7225 -? 0.575 0.315 0 n y n ruditapes_c12310 -1.199 0.576 22.382 18.659 n n n ruditapes_c28401 -1.254 0.576 14.547 11.596 n n n ruditapes_lrc19269 -1.257 0.576 14.268 11.349 n n n ruditapes_c19440 1.323 0.576 6.646 8.795 n n n ruditapes_c33632 -1.504 0.576 4.777 3.175 n y n ruditapes_c23959 2.044 0.576 0.859 1.756 n y n ruditapes2_c8 -1.758 0.576 PREDICTED: similar to Y32F6A.4 [Ciona intestinalis] 2.702 1.537 n y n ruditapes_c2839 2.211 0.576 translocase of outer mitochondrial membrane 7 homolog 0.674 1.49 n y n ruditapes_c26156 2.313 0.576 0.593 1.371 n y n ruditapes_lrc28946 2.788 0.576 0.366 1.02 n y n ruditapes_c15658 -2.123 0.576 1.671 0.787 n y n ruditapes_lrc9741 5.171 0.576 0.11 0.569 n y n ruditapes_c22041 -2.669 0.576 1.113 0.417 n y n ruditapes_lrc28521 -2.891 0.576 0.995 0.344 n y n ruditapes_c20328 ? 0.576 0 0.314 n y n ruditapes_c23686 ? 0.576 0 0.314 n y n ruditapes_c10143 ? 0.576 mgc89563 protein 0 0.313 n y n ruditapes_c171 ? 0.576 0 0.312 n y n ruditapes_lrc15509 -3.706 0.576 0.749 0.202 n y n ruditapes_c3275 -5.93 0.576 chondroitin sulfate proteoglycan 2 0.531 0.09 n y n ruditapes_c8848 -5.93 0.576 0.531 0.09 n y n ruditapes_lrc34135 -6.671 0.576 0.499 0.075 n y n ruditapes_c13902 -13.343 0.576 0.393 0.029 n y n ruditapes_c12620 -? 0.576 0.313 0 n y n ruditapes_c19764 -? 0.576 0.313 0 n y n ruditapes_c9689 -? 0.576 0.312 0 n y n ruditapes2_c3415 1.074 0.577 ribosomal protein s3a /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0006413 // translational initiation /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0009790 // embryonic development 98.622 105.903 n n n ruditapes_c31507 1.41 0.577 4.307 6.071 n n n ruditapes_c17918 -1.384 0.577 7.265 5.251 n n n ruditapes_c18700 -1.384 0.577 7.256 5.244 n n n ruditapes_c25450 -1.465 0.577 ddx27 protein /// 0005515 // protein binding 5.377 3.671 n n n ruditapes_c11689 1.706 0.577 1.651 2.816 n y n ruditapes_c24383 1.739 0.577 1.522 2.646 n y n ruditapes_lrc8634 -1.561 0.577 4.069 2.607 n y n ruditapes_c20857 1.769 0.577 1.424 2.519 n y n ruditapes_lrc32306 -1.577 0.577 3.899 2.472 n y n ruditapes_c19022 -1.588 0.577 3.794 2.388 n y n ruditapes_c8003 -1.668 0.577 loc100170577 protein 3.191 1.913 n y n ruditapes_c7068 -1.73 0.577 2.82 1.63 n y n ruditapes2_c898 -1.734 0.577 2.805 1.618 n y n ruditapes_lrc32707 2.548 0.577 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.456 1.161 n y n ruditapes_c13392 2.698 0.577 0.395 1.067 n y n ruditapes_lrc34080 3.058 0.577 translationally controlled tumor protein 0.295 0.902 n y n ruditapes_c24590 -2.093 0.577 1.719 0.821 n y n ruditapes_c10078 -2.113 0.577 d-beta-hydroxybutyrate dehydrogenase 1.681 0.796 n y n ruditapes_c24551 -2.123 0.577 1.661 0.782 n y n ruditapes_c26939 -2.131 0.577 1.649 0.774 n y n ruditapes_c29827 -2.224 0.577 1.511 0.68 n y n ruditapes_lrc34085 -2.965 0.577 lethal 06225 /// 0005811 // lipid particle 0.957 0.323 n y n ruditapes_c20176 ? 0.577 0 0.312 n y n ruditapes_c20662 ? 0.577 death adaptor molecule raidd-2 isoform 2 0 0.311 n y n ruditapes_c24619 ? 0.577 0 0.311 n y n ruditapes_lrc34096 ? 0.577 ef hand domain protein 0 0.311 n y n ruditapes_c19709 -4.003 0.577 0.694 0.173 n y n ruditapes_c27051 -5.93 0.577 0.528 0.089 n y n ruditapes_c24865 -6.671 0.577 0.496 0.074 n y n ruditapes_c2002 -? 0.577 0.312 0 n y n ruditapes_c11420 -? 0.577 0.311 0 n y n ruditapes_c602 -1.173 0.578 28.814 24.567 n n n ruditapes_c2 -1.363 0.578 molting fluid carboxypeptidase a "/// 0046872 // metal ion binding /// 0070011 // peptidase activity, acting on L-amino acid peptides" 7.932 5.82 n n n ruditapes_c26054 1.485 0.578 3.159 4.691 n n n ruditapes_c16642 -1.442 0.578 5.787 4.014 n n n ruditapes_c24931 -1.623 0.578 3.486 2.148 n y n ruditapes_c14464 -1.658 0.578 3.235 1.952 n y n ruditapes_c5346 2.453 0.578 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0.499 1.223 n y n ruditapes_c830 2.634 0.578 macrophage migration inhibitory factor 0.416 1.096 n y n ruditapes_c22305 -1.986 0.578 1.925 0.97 n y n ruditapes_c4914 -2.03 0.578 brain protein i3 /// 0005794 // Golgi apparatus 1.83 0.901 n y n ruditapes_c8072 -2.224 0.578 calmodulin 2 /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0006468 // protein amino acid phosphorylation /// 0004687 // myosin light chain kinase activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0000287 // magnesium ion binding /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0018298 // protein-chromophore linkage /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 1.505 0.677 n y n ruditapes_c26147 5.396 0.578 0.102 0.55 n y n ruditapes_c11119 -2.436 0.578 1.277 0.524 n y n ruditapes_c29703 7.195 0.578 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.066 0.472 n y n ruditapes_c11045 ? 0.578 0 0.31 n y n ruditapes_c18906 ? 0.578 elmo domain containing 2 0 0.31 n y n ruditapes_s38199 -4.003 0.578 nadh dehydrogenase 1 alpha subcomplex subunit 6 0.693 0.173 n y n ruditapes_c25793 -5.559 0.578 0.545 0.098 n y n ruditapes_c22888 -6.671 0.578 0.495 0.074 n y n ruditapes_lrc32470 -11.119 0.578 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0.408 0.037 n y n ruditapes_c16282 -15.566 0.578 0.377 0.024 n y n ruditapes_c27943 -? 0.578 0.31 0 n y n ruditapes_c10578 -? 0.578 0.309 0 n y n ruditapes2_c558 1.281 0.579 8.417 10.783 n n n ruditapes_c17265 -1.307 0.579 10.34 7.912 n n n ruditapes_c29431 -1.365 0.579 7.77 5.692 n n n ruditapes2_c1615 -1.374 0.579 prefoldin 5 "/// 0006355 // regulation of transcription, DNA-dependent /// 0003714 // transcription corepressor activity /// 0005856 // cytoskeleton /// 0016272 // prefoldin complex /// 0005634 // nucleus /// 0051082 // unfolded protein binding /// 0006457 // protein folding" 7.5 5.459 n n n ruditapes_c10526 1.654 0.579 1.866 3.086 n y n ruditapes2_c655 -1.524 0.579 loc495089 protein 4.456 2.924 n y n ruditapes_c2285 -1.543 0.579 hypotheticial protein 4.215 2.732 n y n ruditapes2_c5707 1.859 0.579 1.167 2.169 n y n ruditapes_c23009 -1.779 0.579 2.564 1.441 n y n ruditapes_c9047 2.642 0.579 0.411 1.085 n y n ruditapes_c6083 -2.001 0.579 1.881 0.94 n y n ruditapes2_c2058 -2.224 0.579 1.499 0.674 n y n ruditapes_c9609 -2.372 0.579 1.328 0.56 n y n ruditapes_c25616 5.396 0.579 0.101 0.546 n y n ruditapes_c24061 5.846 0.579 cg7830 cg7830- partial 0.089 0.523 n y n ruditapes2_lrc3176 7.645 0.579 nadh dehydrogenase iron-sulfur protein 5 0.06 0.459 n y n ruditapes_c28489 ? 0.579 0 0.308 n y n ruditapes_c22133 -3.177 0.579 0.87 0.274 n y n ruditapes_c12324 -4.448 0.579 hypothetical protein BRAFLDRAFT_64283 [Branchiostoma floridae] 0.63 0.142 n y n ruditapes_lrc34438 -4.448 0.579 phosphate carrier mitochondrial precursor /// 0006810 // transport /// 0005488 // binding /// 0015317 // phosphate:hydrogen symporter activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane 0.63 0.142 n y n ruditapes_c23035 -6.671 0.579 0.492 0.074 n y n ruditapes_c13490 -11.119 0.579 0.405 0.036 n y n ruditapes_c13790 -11.119 0.579 novel protein vertebrate chromosome 6 open reading frame 31 0.405 0.036 n y n ruditapes_lrc13899 -? 0.579 0.309 0 n y n ruditapes_c17044 -? 0.579 0.308 0 n y n ruditapes_c28360 -? 0.579 0.308 0 n y n ruditapes_c28821 -? 0.579 0.308 0 n y n ruditapes_c13856 -1.231 0.58 16.763 13.612 n n n ruditapes_c31138 1.306 0.58 7.199 9.401 n n n ruditapes_c20573 1.311 0.58 6.964 9.13 n n n ruditapes_lrc14066 -1.34 0.58 8.712 6.502 n n n ruditapes_lrc10445 -1.403 0.58 6.615 4.716 n n n ruditapes_c9823 -1.476 0.58 5.118 3.469 n n n ruditapes_lrc8438 1.709 0.58 tropomyosin [Venerupis philippinarum] 1.611 2.754 n y n ruditapes_c10091 -1.541 0.58 cop9 constitutive photomorphogenic homolog subunit 8 /// 0008180 // signalosome /// 0005515 // protein binding 4.215 2.734 n y n ruditapes_lrc33960 1.799 0.58 predicted protein [Nematostella vectensis] 1.318 2.371 n y n ruditapes_c1317 -1.596 0.58 carboxypeptidase a1 /// 0044267 // cellular protein metabolic process /// 0004180 // carboxypeptidase activity /// 0008237 // metallopeptidase activity /// 0005515 // protein binding 3.666 2.297 n y n ruditapes_s36564 1.911 0.58 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.053 2.013 n y n ruditapes_lrc30030 -1.645 0.58 3.287 1.998 n y n ruditapes_c28415 -1.736 0.58 2.758 1.589 n y n ruditapes_c22843 2.136 0.58 0.73 1.56 n y n ruditapes_c27170 2.398 0.58 0.525 1.258 n y n ruditapes_c24506 -1.937 0.58 2.026 1.046 n y n ruditapes_lrc34978 -2.566 0.58 mitochondrial ubiquinol cytochrome c reductase complex 1.155 0.45 n y n ruditapes_c30750 -2.669 0.58 1.088 0.408 n y n ruditapes_c14411 -2.78 0.58 family with sequence similarity member isoform cra_a 1.03 0.37 n y n ruditapes_c22668 ? 0.58 0 0.307 n y n ruditapes2_c5862 ? 0.58 0 0.306 n y n ruditapes_c12638 ? 0.58 0 0.306 n y n ruditapes_c18527 ? 0.58 ankyrin repeat domain 39 0 0.306 n y n ruditapes_c5320 ? 0.58 proteasome subunit alpha type-3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 0 0.306 n y n ruditapes_c17441 -4.003 0.58 0.686 0.171 n y n ruditapes_lrc35481 -4.448 0.58 unnamed protein product [Tetraodon nigroviridis] 0.63 0.142 n y n ruditapes2_lrc4718 -5.003 0.58 0.577 0.115 n y n ruditapes_c20789 -6.671 0.58 0.489 0.073 n y n ruditapes_c26059 -6.671 0.58 0.489 0.073 n y n ruditapes_s39589 -6.671 0.58 protein /// 0005528 // FK506 binding /// 0003824 // catalytic activity /// 0032925 // regulation of activin receptor signaling pathway /// 0043231 // intracellular membrane-bounded organelle /// 0050776 // regulation of immune response /// 0060314 // regulation of ryanodine-sensitive calcium-release channel activity /// 0046332 // SMAD binding /// 0031398 // positive regulation of protein ubiquitination /// 0004871 // signal transducer activity /// 0043206 // fibril organization /// 0007183 // SMAD protein complex assembly /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0034205 // beta-amyloid formation /// 0032092 // positive regulation of protein binding /// 0032513 // negative regulation of protein phosphatase type 2B activity /// 0048185 // activin binding /// 0006457 // protein folding 0.489 0.073 n y n ruditapes_c18865 -8.895 0.58 0.435 0.049 n y n ruditapes_c23195 -8.895 0.58 predicted protein [Nematostella vectensis] 0.433 0.049 n y n ruditapes_c28673 -13.343 0.58 0.386 0.029 n y n ruditapes_c22837 -? 0.58 0.307 0 n y n ruditapes_c25564 -? 0.58 0.307 0 n y n ruditapes_c7778 -? 0.58 0.307 0 n y n ruditapes2_c1905 -1.111 0.581 66.275 59.661 n n n ruditapes2_c3332 -1.142 0.581 40.691 35.616 n n n ruditapes_c601 -1.278 0.581 12.187 9.539 n n n ruditapes2_c1193 1.406 0.581 4.28 6.016 n n n ruditapes2_c1922 -1.38 0.581 7.201 5.217 n n n ruditapes2_c2702 -1.395 0.581 6.811 4.883 n n n ruditapes_lrc38808 -1.468 0.581 mitochondrial ubiquinol cytochrome c reductase complex 5.219 3.556 n n n ruditapes_lrc10981 -1.676 0.581 3.066 1.829 n y n ruditapes_c29551 -1.758 0.581 2.624 1.492 n y n ruditapes_c28933 -1.779 0.581 2.541 1.428 n y n ruditapes_c30500 2.377 0.581 0.535 1.271 n y n ruditapes_c8752 -1.931 0.581 2.028 1.05 n y n ruditapes_c9522 3.26 0.581 0.252 0.823 n y n ruditapes_c8173 -2.107 0.581 1.655 0.786 n y n ruditapes_c18488 -2.224 0.581 1.48 0.665 n y n ruditapes_c8039 -2.965 0.581 0.937 0.316 n y n ruditapes_c18178 ? 0.581 0 0.305 n y n ruditapes_c24562 ? 0.581 0 0.305 n y n ruditapes_c18334 ? 0.581 0 0.304 n y n ruditapes_c18591 ? 0.581 amine copper containing 2 /// 0003824 // catalytic activity /// 0005488 // binding 0 0.304 n y n ruditapes_c20569 ? 0.581 0 0.304 n y n ruditapes_lrc31463 -3.336 0.581 0.816 0.245 n y n ruditapes_lrc16130 -4.448 0.581 0.626 0.141 n y n ruditapes_c13369 -5.189 0.581 0.56 0.108 n y n ruditapes_c20174 -? 0.581 0.305 0 n y n ruditapes_c22135 -? 0.581 0.305 0 n y n ruditapes_c31794 -? 0.581 0.305 0 n y n ruditapes_c23505 -? 0.581 0.304 0 n y n ruditapes_c8484 -? 0.581 hypothetical protein BRAFLDRAFT_91517 [Branchiostoma floridae] 0.304 0 n y n ruditapes_c10172 1.319 0.582 6.572 8.672 n n n ruditapes_c15206 -1.503 0.582 4.654 3.098 n y n ruditapes2_c446 -1.56 0.582 zinc- -containing protein /// 0046872 // metal ion binding 3.986 2.556 n y n ruditapes2_c4218 1.799 0.582 hypothetical protein IscW_ISCW018256 [Ixodes scapularis] 1.301 2.339 n y n ruditapes_lrc26632 2.248 0.582 0.622 1.398 n y n ruditapes_c21099 -1.831 0.582 2.319 1.266 n y n ruditapes_c3506 -2.076 0.582 sulfotransferase family cytosolic 1c member 1 /// 0018958 // phenol metabolic process /// 0009308 // amine metabolic process /// 0005856 // cytoskeleton /// 0008146 // sulfotransferase activity /// 0005488 // binding /// 0065008 // regulation of biological quality /// 0005737 // cytoplasm /// 0008202 // steroid metabolic process /// 0006805 // xenobiotic metabolic process 1.699 0.819 n y n ruditapes_s34035 -2.224 0.582 1.469 0.661 n y n ruditapes_c13639 ? 0.582 egf-like domain-containing protein 0 0.304 n y n ruditapes2_c993 ? 0.582 0 0.303 n y n ruditapes_c10919 ? 0.582 0 0.303 n y n ruditapes_c19488 ? 0.582 chloride channel 6 /// 0005216 // ion channel activity 0 0.303 n y n ruditapes_c30741 ? 0.582 0 0.303 n y n ruditapes_c31963 ? 0.582 0 0.303 n y n ruditapes_c31026 -3.15 0.582 0.866 0.275 n y n ruditapes_c27959 -3.558 0.582 0.758 0.213 n y n ruditapes_c22455 -4.003 0.582 0.678 0.169 n y n ruditapes2_c999 -4.003 0.582 cu zn superoxide dismutase 0.677 0.169 n y n ruditapes_c13064 -5.189 0.582 0.558 0.108 n y n ruditapes_c14999 -5.559 0.582 0.534 0.096 n y n ruditapes_c20487 -6.671 0.582 0.484 0.073 n y n ruditapes2_lrc6759 -11.119 0.582 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0.399 0.036 n y n ruditapes2_c634 -13.343 0.582 0.381 0.029 n y n ruditapes_c24440 -? 0.582 0.304 0 n y n ruditapes_c22864 -? 0.582 0.303 0 n y n ruditapes_c26087 -? 0.582 0.303 0 n y n ruditapes_c6099 -? 0.582 0.303 0 n y n ruditapes_s36345 -? 0.582 0.303 0 n y n ruditapes_c2292 1.17 0.583 20.865 24.41 n n n ruditapes_lrc35116 -1.179 0.583 cathepsin l /// 0007275 // multicellular organismal development /// 0030154 // cell differentiation /// 0006508 // proteolysis /// 0005764 // lysosome /// 0004197 // cysteine-type endopeptidase activity 26.113 22.141 n n n ruditapes_c7202 -1.197 0.583 21.943 18.325 n n n ruditapes2_c2843 -1.209 0.583 19.914 16.476 n n n ruditapes2_c3539 1.232 0.583 11.705 14.421 n n n ruditapes_c30438 -1.265 0.583 splicing factor subunit 2 /// 0005634 // nucleus /// 0006397 // mRNA processing 13.079 10.342 n n n ruditapes2_c976 1.416 0.583 4.051 5.736 n n n ruditapes_c22048 -1.398 0.583 6.645 4.752 n n n ruditapes_c7420 -1.398 0.583 6.627 4.739 n n n ruditapes_c30989 1.54 0.583 2.554 3.932 n y n ruditapes_c18434 -1.454 0.583 5.422 3.729 n n n ruditapes_c7681 -1.468 0.583 5.173 3.524 n n n ruditapes_c13393 -1.57 0.583 3.867 2.464 n y n ruditapes_c4502 1.799 0.583 1.296 2.331 n y n ruditapes_c15628 -1.657 0.583 swi snf matrix actin dependent regulator of subfamily member 2 "/// 0045893 // positive regulation of transcription, DNA-dependent /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0017053 // transcriptional repressor complex /// 0003713 // transcription coactivator activity /// 0016514 // SWI/SNF complex /// 0003677 // DNA binding /// 0008022 // protein C-terminus binding /// 0006338 // chromatin remodeling /// 0045892 // negative regulation of transcription, DNA-dependent" 3.148 1.9 n y n ruditapes_c14811 -1.718 0.583 2.792 1.625 n y n ruditapes_c26065 -1.747 0.583 2.659 1.522 n y n ruditapes_c20515 -1.79 0.583 2.467 1.378 n y n ruditapes_c9364 -1.831 0.583 mitochondrial import inner membrane translocase subunit tim8 a /// 0046872 // metal ion binding /// 0016020 // membrane /// 0006626 // protein targeting to mitochondrion /// 0005740 // mitochondrial envelope 2.304 1.258 n y n ruditapes_c11239 2.586 0.583 complement component q subcomponent-like 3 /// 0005488 // binding 0.425 1.099 n y n ruditapes2_c2928 -1.977 0.583 peptidylprolyl isomerase -like 6 /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 1.894 0.958 n y n ruditapes2_lrc4339 -2.001 0.583 1.839 0.919 n y n ruditapes2_c1246 -2.015 0.583 1.808 0.897 n y n ruditapes_c24051 -2.038 0.583 1.765 0.866 n y n ruditapes_c21449 -2.1 0.583 1.651 0.786 n y n ruditapes2_c2597 -2.138 0.583 probable l-proline 4-hydroxylase 1.59 0.744 n y n ruditapes_c12414 -2.224 0.583 1.466 0.659 n y n ruditapes_c9034 4.497 0.583 0.135 0.606 n y n ruditapes_c15295 7.645 0.583 oxoglutarate (alpha-ketoglutarate) dehydrogenase /// 0005759 // mitochondrial matrix /// 0051087 // chaperone binding /// 0031072 // heat shock protein binding /// 0008152 // metabolic process /// 0034602 // oxoglutarate dehydrogenase (NAD+) activity /// 0031966 // mitochondrial membrane 0.059 0.45 n y n ruditapes_c28371 -2.7 0.583 1.055 0.391 n y n ruditapes_c25498 ? 0.583 protein /// 0005576 // extracellular region /// 0005529 // sugar binding /// 0046872 // metal ion binding /// 0031347 // regulation of defense response 0 0.302 n y n ruditapes_c743 ? 0.583 dm9 domain-containing protein 0 0.302 n y n ruditapes_lrc21160 ? 0.583 0 0.302 n y n ruditapes2_lrc5115 ? 0.583 0 0.301 n y n ruditapes_c29083 ? 0.583 0 0.301 n y n ruditapes_c5305 -3.058 0.583 0.89 0.291 n y n ruditapes_c8435 -4.003 0.583 0.675 0.169 n y n ruditapes_c25032 -4.003 0.583 0.674 0.168 n y n ruditapes_c21173 -4.448 0.583 0.617 0.139 n y n ruditapes_c24316 -5.189 0.583 0.556 0.107 n y n ruditapes_s39375 -6.671 0.583 glutathione s-transferase /// 0005515 // protein binding 0.482 0.072 n y n ruditapes_c38713 -13.343 0.583 0.379 0.028 n y n ruditapes_c33084 -15.566 0.583 mannose receptor c1 /// 0005488 // binding /// 0016020 // membrane 0.366 0.024 n y n ruditapes_c10993 -17.79 0.583 0.359 0.02 n y n ruditapes_c29775 -? 0.583 0.302 0 n y n ruditapes_lrc29444 -? 0.583 cathepsin l /// 0005576 // extracellular region /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0.302 0 n y n ruditapes_lrc32035 -? 0.583 0.302 0 n y n ruditapes_c17302 -? 0.583 0.301 0 n y n ruditapes2_lrc3351 1.063 0.584 histone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0001740 // Barr body /// 0010171 // body morphogenesis /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape /// 0009792 // embryonic development ending in birth or egg hatching 127.374 135.351 n n n ruditapes_lrc10062 -1.273 0.584 12.306 9.665 n n n ruditapes_c13455 -1.451 0.584 rna (guanine-9-) methyltransferase domain containing 2 5.429 3.74 n n n ruditapes_c36435 -1.5 0.584 4.653 3.103 n y n ruditapes_lrc10601 -1.543 0.584 4.125 2.674 n y n ruditapes_c13910 2.441 0.584 0.489 1.194 n y n ruditapes_c13636 -1.875 0.584 enoyl- mitochondrial precursor /// 0005759 // mitochondrial matrix /// 0006635 // fatty acid beta-oxidation /// 0005515 // protein binding /// 0004300 // enoyl-CoA hydratase activity 2.153 1.148 n y n ruditapes2_c1667 -1.994 0.584 1.843 0.924 n y n ruditapes2_lrc3832 6.745 0.584 0.07 0.474 n y n ruditapes_c26963 -2.78 0.584 1.007 0.362 n y n ruditapes_c12408 ? 0.584 0 0.3 n y n ruditapes_c6313 ? 0.584 0 0.3 n y n ruditapes_c9066 ? 0.584 0 0.3 n y n ruditapes_c19598 -3.058 0.584 0.886 0.29 n y n ruditapes_c6468 -3.058 0.584 0.886 0.29 n y n ruditapes_lrc28648 -5.559 0.584 0.53 0.095 n y n ruditapes_c27062 -8.895 0.584 hypothetical protein BRAFLDRAFT_115983 [Branchiostoma floridae] 0.424 0.048 n y n ruditapes_c22341 -11.119 0.584 0.396 0.036 n y n ruditapes_c25035 -11.119 0.584 0.396 0.036 n y n ruditapes_c13666 -? 0.584 0.3 0 n y n ruditapes_c14648 -? 0.584 0.3 0 n y n ruditapes_c17094 -? 0.584 0.3 0 n y n ruditapes_c27947 -? 0.584 0.3 0 n y n ruditapes_lrc35361 -? 0.584 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity /// 0009792 // embryonic development ending in birth or egg hatching 0.3 0 n y n ruditapes_c807 -1.248 0.585 14.445 11.573 n n n ruditapes_c9557 1.276 0.585 tetratricopeptide repeat domain 18 8.452 10.782 n n n ruditapes2_c159 1.489 0.585 3.001 4.469 n n n ruditapes_c8211 -1.461 0.585 5.227 3.577 n n n ruditapes_c19318 -1.668 0.585 anaphase promoting complex subunit 13 /// 0019941 // modification-dependent protein catabolic process /// 0051301 // cell division /// 0005634 // nucleus /// 0007067 // mitosis 3.053 1.831 n y n ruditapes_c21609 -1.701 0.585 2.854 1.678 n y n ruditapes2_c3060 2.214 0.585 0.64 1.417 n y n ruditapes_c14382 2.248 0.585 ankyrin repeat domain 42 0.614 1.38 n y n ruditapes_c20558 3.597 0.585 0.202 0.726 n y n ruditapes_c9173 -2.224 0.585 1.449 0.652 n y n ruditapes_c16105 4.047 0.585 0.161 0.652 n y n ruditapes_c9192 -2.372 0.585 ankyrin repeat domain 39 1.286 0.542 n y n ruditapes_c19887 -2.383 0.585 1.273 0.534 n y n ruditapes_c20976 -2.395 0.585 1.266 0.529 n y n ruditapes_lrc11314 -2.446 0.585 atpase mitochondrial 1.219 0.498 n y n ruditapes_c577 8.094 0.585 0.054 0.435 n y n ruditapes_c24596 -2.83 0.585 0.974 0.344 n y n ruditapes_c10401 ? 0.585 baculoviral iap repeat-containing protein 3 /// 0042981 // regulation of apoptosis /// 0005634 // nucleus /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0004842 // ubiquitin-protein ligase activity 0 0.298 n y n ruditapes_c13303 -3.177 0.585 0.841 0.265 n y n ruditapes_c9640 -3.494 0.585 0.76 0.218 n y n ruditapes_c17931 -6.671 0.585 0.476 0.071 n y n ruditapes_s38596 -6.671 0.585 0.475 0.071 n y n ruditapes_c12435 -7.783 0.585 0.444 0.057 n y n ruditapes_c24315 -8.895 0.585 0.423 0.048 n y n ruditapes_c33874 -11.119 0.585 thioredoxin domain containing 9 0.393 0.035 n y n ruditapes_c11375 -? 0.585 0.298 0 n y n ruditapes2_c824 -1.185 0.586 ccaat enhancer binding protein gamma /// 0016563 // transcription activator activity /// 0003700 // transcription factor activity /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0051091 // positive regulation of transcription factor activity /// 0045739 // positive regulation of DNA repair /// 0043353 // enucleate erythrocyte differentiation /// 0043565 // sequence-specific DNA binding /// 0016071 // mRNA metabolic process /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0030183 // B cell differentiation /// 0003690 // double-stranded DNA binding /// 0046982 // protein heterodimerization activity /// 0045078 // positive regulation of interferon-gamma biosynthetic process /// 0016564 // transcription repressor activity /// 0042267 // natural killer cell mediated cytotoxicity /// 0006338 // chromatin remodeling /// 0008134 // transcription factor binding /// 0043433 // negative regulation of transcription factor activity /// 0042803 // protein homodimerization activity 24.409 20.602 n n n ruditapes_c33353 1.193 0.586 protein 16.249 19.379 n n n ruditapes_c9037 -1.251 0.586 14.11 11.28 n n n ruditapes2_c921 -1.37 0.586 7.333 5.352 n n n ruditapes_c10391 1.461 0.586 3.309 4.836 n n n ruditapes2_c839 -1.449 0.586 splicing factor u2af 38 kda subunit /// 0005634 // nucleus /// 0005488 // binding 5.399 3.725 n n n ruditapes_c20008 1.649 0.586 1.818 2.998 n y n ruditapes_c24600 1.709 0.586 1.559 2.664 n y n ruditapes_c10257 -1.575 0.586 3.736 2.372 n y n ruditapes_lrc38510 1.799 0.586 component of the counting factor complex 1.276 2.296 n y n ruditapes_c14620 1.799 0.586 1.276 2.294 n y n ruditapes_lrc27818 1.82 0.586 1.218 2.218 n y n ruditapes_c20527 -1.617 0.586 phosphatidylethanolamine-binding protein 3.39 2.096 n y n ruditapes_c24981 -1.668 0.586 3.034 1.819 n y n ruditapes2_c472 -1.677 0.586 2.98 1.777 n y n ruditapes_c16714 -1.752 0.586 2.59 1.478 n y n ruditapes2_c6209 -1.804 0.586 2.369 1.313 n y n ruditapes_c18227 -1.831 0.586 2.275 1.242 n y n ruditapes_c20135 -2.355 0.586 1.298 0.551 n y n ruditapes_c15110 -2.628 0.586 1.081 0.412 n y n ruditapes_c24734 -2.669 0.586 1.056 0.396 n y n ruditapes_c16988 -2.817 0.586 0.977 0.347 n y n ruditapes_c21223 ? 0.586 0 0.297 n y n ruditapes_c29736 ? 0.586 0 0.297 n y n ruditapes_c5965 ? 0.586 0 0.297 n y n ruditapes_lrc32051 ? 0.586 0 0.297 n y n ruditapes_c27037 -5.189 0.586 0.546 0.105 n y n ruditapes_c5349 -5.93 0.586 protein 1 0.505 0.085 n y n ruditapes_c10648 -6.671 0.586 0.474 0.071 n y n ruditapes_c28863 -7.783 0.586 0.442 0.057 n y n ruditapes_c30113 -? 0.586 0.297 0 n y n ruditapes_c29137 -? 0.586 0.296 0 n y n ruditapes_lrc32388 -1.119 0.587 cytoplasmic actin 56.299 50.324 n n n ruditapes_s37025 1.171 0.587 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 20.122 23.562 n n n ruditapes2_c2820 -1.249 0.587 14.137 11.315 n n n ruditapes_c9180 -1.26 0.587 13.224 10.496 n n n ruditapes_c8116 -1.4 0.587 6.455 4.61 n n n ruditapes2_c2566 -1.459 0.587 chondroitin sulfate proteoglycan 2 /// 0005488 // binding /// 0009987 // cellular process 5.207 3.568 n n n ruditapes_c10140 -1.463 0.587 30s ribosomal protein s12 /// 0008049 // male courtship behavior /// 0005763 // mitochondrial small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0050910 // detection of mechanical stimulus involved in sensory perception of sound 5.136 3.511 n n n ruditapes2_c3631 -1.494 0.587 4.642 3.106 n n n ruditapes2_c2871 -1.763 0.587 2.522 1.431 n y n ruditapes_c610 -2.026 0.587 isoform g 1.745 0.861 n y n ruditapes_c20307 -2.224 0.587 1.436 0.646 n y n ruditapes_s37158 4.497 0.587 0.132 0.593 n y n ruditapes_c7634 -2.344 0.587 1.296 0.553 n y n ruditapes_c3567 -2.557 0.587 1.124 0.439 n y n ruditapes_c14945 -2.594 0.587 1.096 0.422 n y n ruditapes_c22453 ? 0.587 0 0.296 n y n ruditapes2_c4446 ? 0.587 ring-box 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0006281 // DNA repair /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0019005 // SCF ubiquitin ligase complex /// 0008270 // zinc ion binding /// 0005680 // anaphase-promoting complex /// 0004842 // ubiquitin-protein ligase activity /// 0008190 // eukaryotic initiation factor 4E binding /// 0030891 // VCB complex 0 0.295 n y n ruditapes_c25727 ? 0.587 0 0.295 n y n ruditapes_lrc19143 ? 0.587 0 0.295 n y n ruditapes_c21951 -3.058 0.587 0.873 0.286 n y n ruditapes_c31580 -3.336 0.587 0.791 0.237 n y n ruditapes_c29796 -3.336 0.587 0.788 0.236 n y n ruditapes_c27380 -3.558 0.587 0.738 0.207 n y n ruditapes_c17422 -6.671 0.587 0.472 0.071 n y n ruditapes_c12917 -8.895 0.587 0.418 0.047 n y n ruditapes_c12684 -8.895 0.587 0.417 0.047 n y n ruditapes_c9378 -8.895 0.587 0.417 0.047 n y n ruditapes_c22324 -? 0.587 0.296 0 n y n ruditapes2_lrc6122 -? 0.587 0.295 0 n y n ruditapes_c21323 -? 0.587 0.295 0 n y n ruditapes_c9753 -? 0.587 0.294 0 n y n ruditapes_c16199 -1.199 0.588 21.037 17.538 n n n ruditapes_lrc19177 -1.211 0.588 19.053 15.738 n n n ruditapes_c22412 -1.249 0.588 14.145 11.324 n n n ruditapes_c14322 -1.371 0.588 7.251 5.29 n n n ruditapes_c23875 1.529 0.588 2.571 3.932 n y n ruditapes_c662 -1.502 0.588 4.527 3.015 n y n ruditapes2_lrc4758 -1.557 0.588 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 3.875 2.489 n y n ruditapes_c24556 1.883 0.588 solute carrier family 39 (zinc transporter) member 12 /// 0030001 // metal ion transport /// 0016020 // membrane 1.065 2.006 n y n ruditapes_c16518 -1.658 0.588 3.071 1.853 n y n ruditapes_c23395 -1.668 0.588 3.004 1.801 n y n ruditapes_c14567 -1.701 0.588 2.817 1.656 n y n ruditapes_lrc35043 -1.718 0.588 thioester-containing protein 2.72 1.583 n y n ruditapes_c16613 -1.744 0.588 2.591 1.486 n y n ruditapes_c29521 -1.795 0.588 2.387 1.33 n y n ruditapes_c26452 -1.921 0.588 aminoacylase 1-like 2 /// 0016787 // hydrolase activity 1.985 1.034 n y n ruditapes_c11761 -2.03 0.588 1.736 0.855 n y n ruditapes2_c5313 -2.085 0.588 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0005739 // mitochondrion 1.63 0.782 n y n ruditapes_c17208 -2.33 0.588 1.304 0.56 n y n ruditapes_c16944 7.195 0.588 polymerase ii (dna directed) polypeptide "/// 0003899 // DNA-directed RNA polymerase activity /// 0006356 // regulation of transcription from RNA polymerase I promoter /// 0005665 // DNA-directed RNA polymerase II, core complex /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0003677 // DNA binding /// 0008270 // zinc ion binding /// 0006383 // transcription from RNA polymerase III promoter /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0000398 // nuclear mRNA splicing, via spliceosome" 0.063 0.45 n y n ruditapes_c28358 ? 0.588 0 0.294 n y n ruditapes_lrc33741 ? 0.588 0 0.294 n y n ruditapes_c11429 ? 0.588 cytochrome family subfamily polypeptide 1 /// 0046872 // metal ion binding /// 0016020 // membrane /// 0004497 // monooxygenase activity 0 0.293 n y n ruditapes_c15107 ? 0.588 c-type superfamily member 14 /// 0005488 // binding /// 0016020 // membrane 0 0.293 n y n ruditapes_c25577 ? 0.588 0 0.293 n y n ruditapes_lrc23001 ? 0.588 cysteine-rich protein 1 0 0.293 n y n ruditapes_lrc35084 ? 0.588 0 0.293 n y n ruditapes_c11668 -3.058 0.588 0.868 0.284 n y n ruditapes_c20785 -3.558 0.588 transcriptional activator protein pur-alpha 0.732 0.206 n y n ruditapes_lrc20023 -6.671 0.588 0.47 0.07 n y n ruditapes_c13599 -6.671 0.588 0.468 0.07 n y n ruditapes_c19823 -7.413 0.588 protein 0.446 0.06 n y n ruditapes_c10726 -? 0.588 0.293 0 n y n ruditapes_c11424 -? 0.588 0.293 0 n y n ruditapes_c22817 1.175 0.589 19.223 22.579 n n n ruditapes_lrc7141 -1.205 0.589 ribosomal protein l12e /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 19.772 16.403 n n n ruditapes2_c2149 -1.28 0.589 11.533 9.013 n n n ruditapes_c7709 -1.329 0.589 8.766 6.595 n n n ruditapes_c19101 -1.371 0.589 7.196 5.249 n n n ruditapes_lrc27912 -1.399 0.589 6.401 4.575 n n n ruditapes_c25967 -1.506 0.589 4.443 2.951 n y n ruditapes_c25366 1.702 0.589 1.559 2.653 n y n ruditapes_c5362 -1.574 0.589 3.706 2.355 n y n ruditapes_c21691 -1.609 0.589 3.404 2.116 n y n ruditapes_c7403 -1.868 0.589 2.122 1.136 n y n ruditapes_c14008 2.923 0.589 purple acid 0.307 0.897 n y n ruditapes_c25647 -2.038 0.589 1.704 0.836 n y n ruditapes2_c2541 -2.224 0.589 1.423 0.64 n y n ruditapes_c16014 -2.224 0.589 PREDICTED: similar to AGAP007723-PA [Tribolium castaneum] 1.419 0.638 n y n ruditapes_c7130 -2.224 0.589 1.418 0.638 n y n ruditapes_c8880 -2.224 0.589 1.417 0.637 n y n ruditapes_c25216 ? 0.589 0 0.292 n y n ruditapes_c8898 ? 0.589 0 0.292 n y n ruditapes_s36458 -3.892 0.589 chloroplast ferritin 0.669 0.172 n y n ruditapes_c31168 -5.003 0.589 0.55 0.11 n y n ruditapes_c35470 -8.895 0.589 0.413 0.046 n y n ruditapes_c11397 -11.119 0.589 0.386 0.035 n y n ruditapes_lrc25304 -11.119 0.589 0.384 0.035 n y n ruditapes_c18414 -? 0.589 0.292 0 n y n ruditapes_c25671 -? 0.589 0.292 0 n y n ruditapes_c11772 -1.232 0.59 15.88 12.89 n n n ruditapes_c17884 1.287 0.59 7.651 9.849 n n n ruditapes_c16560 -1.29 0.59 10.763 8.345 n n n ruditapes_c14880 -1.404 0.59 6.27 4.467 n n n ruditapes_c30642 -1.526 0.59 4.182 2.74 n y n ruditapes_c14786 -1.679 0.59 2.902 1.728 n y n ruditapes_c19801 -2.038 0.59 1.701 0.834 n y n ruditapes_lrc20588 4.272 0.59 PREDICTED: hypothetical protein [Hydra magnipapillata] 0.142 0.606 n y n ruditapes_c16865 4.947 0.59 0.11 0.545 n y n ruditapes2_c5623 7.645 0.59 slit1 protein /// 0040011 // locomotion /// 0048513 // organ development /// 0007411 // axon guidance 0.057 0.432 n y n ruditapes_c21829 -2.628 0.59 1.056 0.402 n y n ruditapes_s36381 -2.78 0.59 0.976 0.351 n y n ruditapes_c13306 -2.859 0.59 0.935 0.327 n y n ruditapes_c13028 ? 0.59 0 0.291 n y n ruditapes_c14306 ? 0.59 0 0.29 n y n ruditapes_c14460 ? 0.59 0 0.29 n y n ruditapes_lrc32215 -4.077 0.59 ependymin related protein-1 0.64 0.157 n y n ruditapes_s39829 -4.448 0.59 0.597 0.134 n y n ruditapes_c5056 -4.892 0.59 0.557 0.114 n y n ruditapes_c21629 -5.189 0.59 hypothetical protein BRAFLDRAFT_74519 [Branchiostoma floridae] 0.534 0.103 n y n ruditapes_c19915 -11.119 0.59 0.384 0.034 n y n ruditapes_c15428 -11.119 0.59 0.383 0.034 n y n ruditapes_lrc29657 -? 0.59 0.291 0 n y n ruditapes_c28551 -1.141 0.591 39.622 34.74 n n n ruditapes_c16624 1.499 0.591 2.802 4.199 n n n ruditapes_c26829 1.499 0.591 2.799 4.196 n n n ruditapes_c24869 -1.449 0.591 5.277 3.643 n n n ruditapes_c9637 -1.61 0.591 3.354 2.084 n y n ruditapes_c21068 -1.617 0.591 3.292 2.035 n y n ruditapes_c19145 -1.736 0.591 2.6 1.498 n y n ruditapes2_c2464 -1.825 0.591 alanyl-trna synthetase domain containing 1 2.239 1.227 n y n ruditapes_c6429 -1.99 0.591 1.791 0.9 n y n ruditapes_c7928 -2.038 0.591 1.691 0.829 n y n ruditapes_c16458 3.597 0.591 0.196 0.704 n y n ruditapes_c22393 -2.426 0.591 1.198 0.494 n y n ruditapes_c25008 -2.965 0.591 0.887 0.299 n y n ruditapes_c17818 ? 0.591 0 0.289 n y n ruditapes_c26035 ? 0.591 transcription elongation factor /// 0003711 // transcription elongation regulator activity /// 0032968 // positive regulation of RNA elongation from RNA polymerase II promoter /// 0004402 // histone acetyltransferase activity /// 0003746 // translation elongation factor activity 0 0.289 n y n ruditapes2_c578 -3.177 0.591 novel protein vertebrate heterogeneous nuclear ribonucleoprotein family (zgc:153703) 0.814 0.256 n y n ruditapes2_c6171 -3.177 0.591 0.814 0.256 n y n ruditapes_c21812 -3.336 0.591 0.77 0.231 n y n ruditapes_s34109 -4.448 0.591 0.593 0.133 n y n ruditapes_lrc32271 -4.448 0.591 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 0.592 0.133 n y n ruditapes_c9666 -5.559 0.591 0.509 0.091 n y n ruditapes_c6227 -5.93 0.591 asialoglycoprotein receptor 1 /// 0005515 // protein binding /// 0009987 // cellular process /// 0004872 // receptor activity 0.492 0.083 n y n ruditapes_c21297 -7.783 0.591 0.431 0.055 n y n ruditapes_c24678 -8.895 0.591 0.408 0.046 n y n ruditapes_c15138 -? 0.591 0.289 0 n y n ruditapes_lrc9951 1.271 0.592 8.427 10.71 n n n ruditapes_c20875 1.394 0.592 s-adenosylhomocysteine hydrolase 4.261 5.94 n n n ruditapes_c20166 -1.365 0.592 7.292 5.344 n n n ruditapes_c31302 -1.478 0.592 4.768 3.225 n n n ruditapes2_c330 1.637 0.592 1.818 2.975 n y n ruditapes_c11966 -1.542 0.592 3.949 2.561 n y n ruditapes_c26647 -1.554 0.592 3.828 2.464 n y n ruditapes_c16490 -1.853 0.592 2.135 1.152 n y n ruditapes_c993 -2.038 0.592 1.678 0.823 n y n ruditapes_c5908 -2.372 0.592 1.24 0.523 n y n ruditapes_c17345 -2.737 0.592 0.987 0.36 n y n ruditapes_c18042 ? 0.592 0 0.287 n y n ruditapes_c24785 ? 0.592 ligase atp-dependent 0 0.287 n y n ruditapes_c31537 ? 0.592 0 0.287 n y n ruditapes_c39761 ? 0.592 translocator protein /// 0044464 // cell part 0 0.287 n y n ruditapes_c5127 ? 0.592 0 0.287 n y n ruditapes_lrc12918 ? 0.592 0 0.287 n y n ruditapes_c8138 -3.892 0.592 0.658 0.169 n y n ruditapes_c15669 -4.448 0.592 0.588 0.132 n y n ruditapes_c22596 -8.895 0.592 zinc finger protein 0.407 0.046 n y n ruditapes2_lrc4898 -8.895 0.592 0.406 0.046 n y n ruditapes_c23068 -11.119 0.592 0.38 0.034 n y n ruditapes_c10197 -? 0.592 0.288 0 n y n ruditapes_c13642 -? 0.592 0.288 0 n y n ruditapes_c23185 -? 0.592 0.287 0 n y n ruditapes_c7268 -1.259 0.593 hypothetical protein BRAFLDRAFT_130783 [Branchiostoma floridae] 12.867 10.22 n n n ruditapes_c30152 -1.295 0.593 10.303 7.956 n n n ruditapes2_c4410 -1.311 0.593 9.44 7.202 n n n ruditapes_c13487 -1.341 0.593 8.084 6.029 n n n ruditapes_c9828 -1.38 0.593 6.799 4.927 n n n ruditapes2_c3630 1.475 0.593 proteasome ( macropain) 26s non- 12 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005838 // proteasome regulatory particle 3.039 4.482 n n n ruditapes_c11469 -1.4 0.593 6.244 4.461 n n n ruditapes_c8640 -1.439 0.593 5.389 3.745 n n n ruditapes_c9248 -1.492 0.593 4.536 3.041 n n n ruditapes_c20180 -1.502 0.593 4.402 2.931 n y n ruditapes_c24758 -1.52 0.593 4.167 2.741 n y n ruditapes_c17920 2.313 0.593 0.541 1.252 n y n ruditapes_c31125 -1.845 0.593 2.143 1.161 n y n ruditapes_c27560 -1.977 0.593 1.794 0.908 n y n ruditapes_c25143 -2.341 0.593 1.259 0.538 n y n ruditapes_c20490 4.947 0.593 0.108 0.536 n y n ruditapes_c31160 4.947 0.593 0.108 0.536 n y n ruditapes_c15441 7.195 0.593 0.061 0.438 n y n ruditapes_c10081 ? 0.593 beta lysosomal-like 0 0.286 n y n ruditapes_c13198 ? 0.593 0 0.286 n y n ruditapes_c18889 ? 0.593 arylacetamide deacetylase-like 1 /// 0016020 // membrane /// 0006470 // protein amino acid dephosphorylation /// 0042301 // phosphate binding /// 0017171 // serine hydrolase activity /// 0006805 // xenobiotic metabolic process 0 0.286 n y n ruditapes_c27025 ? 0.593 0 0.286 n y n ruditapes_c29612 ? 0.593 zinc finger protein 366 0 0.286 n y n ruditapes_c6457 ? 0.593 0 0.286 n y n ruditapes_c10265 ? 0.593 proprotein convertase subtilisin kexin type 1 /// 0051087 // chaperone binding /// 0051605 // protein maturation by peptide bond cleavage /// 0007267 // cell-cell signaling /// 0005615 // extracellular space /// 0030141 // secretory granule /// 0008233 // peptidase activity /// 0043043 // peptide biosynthetic process /// 0043559 // insulin binding /// 0016486 // peptide hormone processing 0 0.285 n y n ruditapes_s39447 ? 0.593 0 0.285 n y n ruditapes_c24585 -3.032 0.593 0.855 0.282 n y n ruditapes_c13588 -3.058 0.593 0.844 0.276 n y n ruditapes_c9752 -6.671 0.593 0.457 0.069 n y n ruditapes2_c2276 -15.566 0.593 0.349 0.022 n y n ruditapes_c29773 -? 0.593 0.286 0 n y n ruditapes_lrc27582 -? 0.593 0.286 0 n y n ruditapes_c26039 -? 0.593 0.285 0 n y n ruditapes_c29001 -1.285 0.594 10.868 8.458 n n n ruditapes_c19183 -1.474 0.594 4.764 3.231 n n n ruditapes2_c523 -1.506 0.594 4.33 2.874 n y n ruditapes_lrc30310 1.653 0.594 mitochondrial atp synthase lipid binding protein precursor "/// 0006811 // ion transport /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain" 1.722 2.848 n y n ruditapes_c875 -1.515 0.594 p8 nuclear protein 4.22 2.785 n y n ruditapes_c30244 1.863 0.594 1.072 1.997 n y n ruditapes_c10568 -1.668 0.594 2.904 1.741 n y n ruditapes_c9169 -2.566 0.594 1.075 0.419 n y n ruditapes_c10988 -2.78 0.594 0.954 0.343 n y n ruditapes_c26112 ? 0.594 0 0.285 n y n ruditapes_c13663 ? 0.594 p21-activated pak /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005925 // focal adhesion /// 0050803 // regulation of synapse structure and activity /// 0006468 // protein amino acid phosphorylation /// 0007391 // dorsal closure /// 0007254 // JNK cascade /// 0004702 // receptor signaling protein serine/threonine kinase activity /// 0050770 // regulation of axonogenesis /// 0007155 // cell adhesion /// 0007411 // axon guidance /// 0008360 // regulation of cell shape /// 0016601 // Rac protein signal transduction 0 0.284 n y n ruditapes_c19341 ? 0.594 0 0.284 n y n ruditapes_c20522 ? 0.594 huntingtin (huntington disease) 0 0.284 n y n ruditapes_c23598 ? 0.594 0 0.284 n y n ruditapes_c31096 ? 0.594 0 0.284 n y n ruditapes_lrc25316 ? 0.594 0 0.284 n y n ruditapes_c20183 -3.336 0.594 kti12 chromatin associated 0.762 0.228 n y n ruditapes_c10673 -3.706 0.594 0.682 0.184 n y n ruditapes_c22623 -5.559 0.594 0.501 0.09 n y n ruditapes_c23298 -8.895 0.594 0.403 0.045 n y n ruditapes2_lrc6105 -13.343 0.594 ribosomal protein s8 /// 0005622 // intracellular 0.358 0.027 n y n ruditapes_c4531 -? 0.594 0.284 0 n y n ruditapes_c36111 -1.171 0.595 26.66 22.759 n n n ruditapes_c10373 -1.26 0.595 hepatopancreas kazal-type proteinase inhibitor 12.666 10.055 n n n ruditapes_c9316 -1.338 0.595 8.116 6.066 n n n ruditapes_c18730 1.443 0.595 3.393 4.897 n n n ruditapes_c14276 -1.406 0.595 6.03 4.288 n n n ruditapes2_c320 1.518 0.595 2.578 3.913 n y n ruditapes2_c1464 -1.544 0.595 3.868 2.506 n y n ruditapes_c24329 -1.552 0.595 acetyl-coenzyme a acyltransferase 1 /// 0048545 // response to steroid hormone stimulus /// 0042493 // response to drug /// 0003985 // acetyl-CoA C-acetyltransferase activity /// 0007584 // response to nutrient /// 0006631 // fatty acid metabolic process /// 0003988 // acetyl-CoA C-acyltransferase activity /// 0005777 // peroxisome 3.784 2.437 n y n ruditapes_c29811 -1.72 0.595 2.611 1.518 n y n ruditapes2_c280 -1.73 0.595 xolloid-like metalloprotease precursor 2.565 1.483 n y n ruditapes_c31995 -1.745 0.595 2.492 1.428 n y n ruditapes_c16968 -1.807 0.595 2.246 1.243 n y n ruditapes_c14668 -1.853 0.595 2.096 1.131 n y n ruditapes_c27203 -1.906 0.595 1.942 1.019 n y n ruditapes_c28031 -2.141 0.595 1.479 0.691 n y n ruditapes_c9890 4.347 0.595 0.134 0.582 n y n ruditapes2_lrc4326 -2.908 0.595 gm2 activator protein 0.892 0.307 n y n ruditapes2_c452 ? 0.595 0 0.283 n y n ruditapes2_c770 ? 0.595 0 0.283 n y n ruditapes_c23711 ? 0.595 0 0.283 n y n ruditapes_c19216 -6.671 0.595 0.452 0.068 n y n ruditapes_c12776 -6.671 0.595 0.451 0.068 n y n ruditapes_c13013 -11.119 0.595 0.374 0.034 n y n ruditapes_lrc27997 -? 0.595 nucleoside diphosphate /// 0005524 // ATP binding /// 0046872 // metal ion binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 0.282 0 n y n ruditapes_c4123 1.2 0.596 14.425 17.308 n n n ruditapes_c29462 1.299 0.596 6.883 8.939 n n n ruditapes_c17191 1.581 0.596 cg4236 /// 0016571 // histone methylation /// 0042826 // histone deacetylase binding /// 0046974 // histone methyltransferase activity (H3-K9 specific) /// 0048813 // dendrite morphogenesis /// 0035098 // ESC/E(Z) complex /// 0000910 // cytokinesis /// 0046976 // histone methyltransferase activity (H3-K27 specific) /// 0006335 // DNA replication-dependent nucleosome assembly /// 0007307 // eggshell chorion gene amplification /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0006342 // chromatin silencing /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0042766 // nucleosome mobilization /// 0031523 // Myb complex /// 0003676 // nucleic acid binding /// 0006281 // DNA repair /// 0016584 // nucleosome positioning /// 0035035 // histone acetyltransferase binding /// 0004402 // histone acetyltransferase activity /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0005700 // polytene chromosome /// 0016590 // ACF complex /// 0007517 // muscle organ development /// 0016589 // NURF complex /// 0003682 // chromatin binding /// 0016251 // general RNA polymerase II transcription factor activity /// 0016573 // histone acetylation /// 0042393 // histone binding 2.095 3.312 n y n ruditapes_c9917 1.664 0.596 prohormone convertase 2 /// 0008236 // serine-type peptidase activity 1.657 2.756 n y n ruditapes2_c2550 -1.791 0.596 2.298 1.283 n y n ruditapes2_lrc4812 -1.835 0.596 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 2.138 1.165 n y n ruditapes_c21027 2.598 0.596 nadh dehydrogenase subunit 5 /// 0044464 // cell part 0.391 1.016 n y n ruditapes_lrc38438 -1.962 0.596 1.798 0.916 n y n ruditapes_c30988 -2.224 0.596 1.37 0.616 n y n ruditapes_lrc8850 -2.409 0.596 1.179 0.489 n y n ruditapes_c16967 -2.78 0.596 thiosulfate sulfurtransferase /// 0005739 // mitochondrion /// 0016740 // transferase activity 0.945 0.34 n y n ruditapes2_c3464 ? 0.596 heat shock protein 0 0.281 n y n ruditapes2_lrc4123 ? 0.596 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0.281 n y n ruditapes_c11662 ? 0.596 hypothetical protein BRAFLDRAFT_123919 [Branchiostoma floridae] 0 0.281 n y n ruditapes_c11836 ? 0.596 endo- -beta-glucanase "/// 0005975 // carbohydrate metabolic process /// 0016798 // hydrolase activity, acting on glycosyl bonds" 0 0.281 n y n ruditapes_c8542 ? 0.596 0 0.281 n y n ruditapes2_lrc4944 ? 0.596 0 0.28 n y n ruditapes_c14531 ? 0.596 0 0.28 n y n ruditapes_c26771 -3.177 0.596 0.794 0.25 n y n ruditapes_c7363 -3.706 0.596 0.676 0.182 n y n ruditapes_c23963 -4.448 0.596 0.578 0.13 n y n ruditapes_c29046 -5.559 0.596 0.495 0.089 n y n ruditapes_c17870 -5.559 0.596 0.494 0.089 n y n ruditapes_c2075 -5.93 0.596 0.477 0.08 n y n ruditapes2_c2070 -13.343 0.596 0.353 0.026 n y n ruditapes_c17786 -? 0.596 0.281 0 n y n ruditapes_c24157 -? 0.596 0.281 0 n y n ruditapes_c24946 -? 0.596 0.281 0 n y n ruditapes_c12302 1.189 0.597 15.943 18.951 n n n ruditapes_c2238 -1.229 0.597 15.61 12.701 n n n ruditapes_c534 -1.237 0.597 translation factor /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity /// 0006417 // regulation of translation 14.681 11.865 n n n ruditapes_c19980 -1.247 0.597 13.704 10.991 n n n ruditapes_lrc39162 1.263 0.597 ribosomal protein l17 /// 0005840 // ribosome 8.667 10.945 n n n ruditapes2_c945 -1.332 0.597 8.276 6.214 n n n ruditapes2_c2449 -1.403 0.597 6.031 4.297 n n n ruditapes_lrc31316 -1.458 0.597 4.934 3.383 n n n ruditapes_c20576 -1.459 0.597 4.917 3.369 n n n ruditapes_c17901 -1.467 0.597 4.803 3.274 n n n ruditapes_c24262 -1.567 0.597 3.603 2.299 n y n ruditapes_c18824 -1.703 0.597 2.673 1.57 n y n ruditapes_c31196 -1.707 0.597 2.653 1.555 n y n ruditapes_c12456 2.313 0.597 0.529 1.225 n y n ruditapes_c36145 2.318 0.597 iron storage protein h-ferritin /// 0046914 // transition metal ion binding /// 0065007 // biological regulation /// 0005515 // protein binding 0.527 1.221 n y n ruditapes_c29874 -1.84 0.597 2.116 1.15 n y n ruditapes_c27852 -1.882 0.597 1.99 1.058 n y n ruditapes_c19006 3.148 0.597 0.249 0.784 n y n ruditapes_c14265 -2.224 0.597 1.36 0.612 n y n ruditapes_lrc38727 -2.224 0.597 mgc81823 protein isoform 2 /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 1.356 0.61 n y n ruditapes_c22544 4.047 0.597 0.151 0.61 n y n ruditapes_c15386 -2.383 0.597 1.196 0.502 n y n ruditapes2_c653 ? 0.597 0 0.28 n y n ruditapes_c11944 ? 0.597 0 0.28 n y n ruditapes_c13082 ? 0.597 0 0.28 n y n ruditapes_c15989 ? 0.597 0 0.28 n y n ruditapes_c27771 ? 0.597 0 0.28 n y n ruditapes2_c4870 ? 0.597 0 0.279 n y n ruditapes_c12710 ? 0.597 0 0.279 n y n ruditapes_c21209 -4.003 0.597 hypothetical protein BRAFLDRAFT_205877 [Branchiostoma floridae] 0.625 0.156 n y n ruditapes2_lrc5073 -5.189 0.597 0.514 0.099 n y n ruditapes_c30153 -7.783 0.597 0.416 0.053 n y n ruditapes_lrc32139 -8.895 0.597 serine proteinase 0.396 0.045 n y n ruditapes_c28941 -? 0.597 0.279 0 n y n ruditapes_lrc14496 -1.145 0.598 35.649 31.121 n n n ruditapes2_c1778 -1.251 0.598 13.224 10.575 n n n ruditapes_c9886 -1.29 0.598 -like 2 "/// 0005524 // ATP binding /// 0006355 // regulation of transcription, DNA-dependent /// 0016481 // negative regulation of transcription /// 0016020 // membrane /// 0042802 // identical protein binding /// 0035267 // NuA4 histone acetyltransferase complex /// 0016568 // chromatin modification /// 0006310 // DNA recombination /// 0006281 // DNA repair /// 0016363 // nuclear matrix /// 0005829 // cytosol /// 0004003 // ATP-dependent DNA helicase activity /// 0040008 // regulation of growth /// 0051082 // unfolded protein binding /// 0003684 // damaged DNA binding /// 0006457 // protein folding" 10.288 7.976 n n n ruditapes_c28474 -1.303 0.598 9.538 7.318 n n n ruditapes_c21815 -1.318 0.598 8.82 6.693 n n n ruditapes_c19912 1.368 0.598 4.662 6.379 n n n ruditapes_c6619 -1.369 0.598 6.918 5.053 n n n ruditapes2_c2945 -1.381 0.598 novel protein 6.569 4.757 n n n ruditapes_c9924 -1.428 0.598 o-sialoglycoprotein endopeptidase /// 0004222 // metalloendopeptidase activity /// 0006508 // proteolysis /// 0008270 // zinc ion binding 5.466 3.828 n n n ruditapes_c8432 -1.439 0.598 5.264 3.658 n n n ruditapes_c24048 -1.495 0.598 4.361 2.916 n n n ruditapes_lrc33992 -1.6 0.598 ribosomal protein s17 /// 0006414 // translational elongation /// 0034101 // erythrocyte homeostasis /// 0006413 // translational initiation /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 3.31 2.069 n y n ruditapes_c25857 -1.636 0.598 3.04 1.858 n y n ruditapes_c4019 -1.668 0.598 2.848 1.707 n y n ruditapes_c24687 -1.692 0.598 2.706 1.599 n y n ruditapes_c1199 -1.941 0.598 1.828 0.942 n y n ruditapes_lrc13255 -2.03 0.598 1.637 0.806 n y n ruditapes_c22478 -2.355 0.598 1.213 0.515 n y n ruditapes_c23352 -2.372 0.598 1.198 0.505 n y n ruditapes_c21116 -2.859 0.598 0.899 0.314 n y n ruditapes_c21568 ? 0.598 oxidase peroxidase /// 0016491 // oxidoreductase activity 0 0.279 n y n ruditapes_c29622 ? 0.598 phospholipase group iii "/// 0004623 // phospholipase A2 activity /// 0006629 // lipid metabolic process /// 0009987 // cellular process /// 0044403 // symbiosis, encompassing mutualism through parasitism" 0 0.279 n y n ruditapes_c17031 ? 0.598 0 0.278 n y n ruditapes_c25754 ? 0.598 0 0.278 n y n ruditapes_c25778 ? 0.598 0 0.278 n y n ruditapes_c31470 ? 0.598 0 0.278 n y n ruditapes_c27078 -3.058 0.598 0.822 0.269 n y n ruditapes_c27284 -5.559 0.598 0.489 0.088 n y n ruditapes_c3757 -5.93 0.598 0.473 0.08 n y n ruditapes_c15868 -11.119 0.598 0.367 0.033 n y n ruditapes_c8568 -11.119 0.598 0.367 0.033 n y n ruditapes_c7033 -15.566 0.598 0.339 0.022 n y n ruditapes_c22878 -? 0.598 0.279 0 n y n ruditapes_lrc24179 -? 0.598 0.278 0 n y n ruditapes_c28379 -1.291 0.599 10.174 7.88 n n n ruditapes_c19286 -1.312 0.599 9.063 6.906 n n n ruditapes2_lrc5821 -1.339 0.599 cytochrome c oxidase subunit via polypeptide 1 /// 0044464 // cell part 7.905 5.905 n n n ruditapes_c13391 -1.375 0.599 6.68 4.858 n n n ruditapes2_lrc4136 1.547 0.599 apolipophorin precursor protein 2.28 3.527 n y n ruditapes_c21404 -1.511 0.599 4.136 2.737 n y n ruditapes_c14495 -1.707 0.599 2.62 1.535 n y n ruditapes_c28200 -1.723 0.599 2.535 1.471 n y n ruditapes_c103 -1.843 0.599 2.079 1.128 n y n ruditapes_c8783 -1.853 0.599 2.047 1.105 n y n ruditapes_c12625 -1.946 0.599 1.806 0.928 n y n ruditapes_lrc37470 -1.946 0.599 1.802 0.926 n y n ruditapes_c16500 -2.022 0.599 neuronal cell adhesion /// 0007399 // nervous system development /// 0009987 // cellular process 1.646 0.814 n y n ruditapes2_c1492 -2.162 0.599 1.426 0.66 n y n ruditapes_lrc37695 -2.471 0.599 1.113 0.451 n y n ruditapes_lrc9767 -2.628 0.599 1.005 0.382 n y n ruditapes_c22619 -2.669 0.599 0.985 0.369 n y n ruditapes_c9160 -2.7 0.599 0.964 0.357 n y n ruditapes_c27413 -2.78 0.599 0.928 0.334 n y n ruditapes_c10499 ? 0.599 c-type lectin /// 0005488 // binding 0 0.277 n y n ruditapes_c21886 ? 0.599 seven transmembrane helix receptor 0 0.277 n y n ruditapes_c30169 ? 0.599 0 0.277 n y n ruditapes2_c2084 ? 0.599 0 0.276 n y n ruditapes_c15806 ? 0.599 0 0.276 n y n ruditapes_c26981 ? 0.599 0 0.276 n y n ruditapes_c27239 ? 0.599 0 0.276 n y n ruditapes_lrc39408 ? 0.599 0 0.276 n y n ruditapes_lrc26107 -4.448 0.599 0.568 0.128 n y n ruditapes2_c363 -15.566 0.599 mannose c type 1-like 1 0.336 0.022 n y n ruditapes_c30943 -? 0.599 0.277 0 n y n ruditapes_c25283 -? 0.599 0.276 0 n y n ruditapes_c5742 1.163 0.6 20.553 23.903 n n n ruditapes_c20370 -1.231 0.6 15.121 12.286 n n n ruditapes2_c275 -1.35 0.6 7.445 5.516 n n n ruditapes_c9325 1.471 0.6 2.969 4.366 n n n ruditapes_c19933 -1.697 0.6 2.661 1.568 n y n ruditapes_c31171 2.361 0.6 0.492 1.161 n y n ruditapes_lrc37810 2.473 0.6 ribosomal protein l21 /// 0005622 // intracellular 0.434 1.074 n y n ruditapes_lrc32027 3.822 0.6 ribosomal protein l8 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.165 0.632 n y n ruditapes_c18598 -2.395 0.6 1.162 0.485 n y n ruditapes_c8110 -2.409 0.6 1.151 0.478 n y n ruditapes_c11265 ? 0.6 0 0.276 n y n ruditapes_c11615 ? 0.6 complement c1q-like protein 4 precursor 0 0.275 n y n ruditapes_c26173 ? 0.6 0 0.275 n y n ruditapes_c26224 ? 0.6 0 0.275 n y n ruditapes_c3287 ? 0.6 0 0.275 n y n ruditapes_c8547 ? 0.6 cubilin (intrinsic factor-cobalamin receptor) /// 0046914 // transition metal ion binding /// 0042953 // lipoprotein transport /// 0016324 // apical plasma membrane /// 0005794 // Golgi apparatus /// 0005624 // membrane fraction /// 0006766 // vitamin metabolic process /// 0007584 // response to nutrient /// 0005768 // endosome /// 0043010 // camera-type eye development /// 0005905 // coated pit /// 0005764 // lysosome /// 0005903 // brush border /// 0045197 // establishment or maintenance of epithelial cell apical/basal polarity /// 0005783 // endoplasmic reticulum /// 0045176 // apical protein localization /// 0006898 // receptor-mediated endocytosis /// 0008202 // steroid metabolic process /// 0042803 // protein homodimerization activity /// 0004872 // receptor activity /// 0030139 // endocytic vesicle 0 0.275 n y n ruditapes_c10175 -3.494 0.6 0.702 0.201 n y n ruditapes_c11373 -3.706 0.6 0.66 0.178 n y n ruditapes2_c1797 -3.841 0.6 5-hydroxytryptamine receptor 1a 0.639 0.166 n y n ruditapes_c14678 -4.077 0.6 0.605 0.148 n y n ruditapes_c21381 -4.448 0.6 0.565 0.127 n y n ruditapes_c10031 -? 0.6 0.275 0 n y n ruditapes_c22550 -? 0.6 0.275 0 n y n ruditapes2_c3194 -? 0.6 0.274 0 n y n ruditapes_c10947 -1.167 0.601 26.984 23.117 n n n ruditapes_c3518 -1.223 0.601 15.967 13.052 n n n ruditapes_c16517 1.381 0.601 4.32 5.964 n n n ruditapes_c15326 -1.341 0.601 7.711 5.749 n n n ruditapes_c20145 -1.35 0.601 protein o-fucosyltransferase 1 /// 0048731 // system development /// 0005783 // endoplasmic reticulum 7.409 5.487 n n n ruditapes_c17615 -1.483 0.601 4.484 3.024 n n n ruditapes_lrc24771 1.649 0.601 1.678 2.767 n y n ruditapes_c20676 1.709 0.601 1.438 2.458 n y n ruditapes2_c2384 -1.626 0.601 cd209l1 protein 3.061 1.882 n y n ruditapes_c22061 2.024 0.601 0.774 1.566 n y n ruditapes_c26489 2.099 0.601 0.689 1.446 n y n ruditapes2_c349 -1.957 0.601 1.761 0.9 n y n ruditapes_lrc32910 -1.99 0.601 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 1.689 0.849 n y n ruditapes_c18907 3.148 0.601 0.244 0.767 n y n ruditapes_lrc38099 3.148 0.601 ribosomal protein l14 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.243 0.766 n y n ruditapes_c4700 3.373 0.601 0.211 0.711 n y n ruditapes_c9440 -2.224 0.601 1.328 0.597 n y n ruditapes_lrc33324 4.047 0.601 0.148 0.597 n y n ruditapes_c19364 5.396 0.601 deleted in colorectal carcinoma 0.09 0.485 n y n ruditapes_lrc32282 -2.409 0.601 developmentally-regulated vdg3 1.146 0.476 n y n ruditapes_c17531 5.846 0.601 0.08 0.465 n y n ruditapes_c20892 -2.541 0.601 1.051 0.413 n y n ruditapes_c25447 ? 0.601 0 0.274 n y n ruditapes_c11518 -3.058 0.601 0.811 0.265 n y n ruditapes_c29463 -3.212 0.601 0.763 0.238 n y n ruditapes2_lrc5007 -6.671 0.601 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0044446 // intracellular organelle part /// 0005783 // endoplasmic reticulum 0.437 0.065 n y n ruditapes_c26340 -8.895 0.601 0.386 0.043 n y n ruditapes_s38937 -8.895 0.601 0.386 0.043 n y n ruditapes_c25654 1.13 0.602 30.727 34.725 n n n ruditapes_c15762 -1.197 0.602 minichromosome maintenance complex component 2 /// 0044428 // nuclear part /// 0005488 // binding /// 0031323 // regulation of cellular metabolic process /// 0044427 // chromosomal part /// 0006260 // DNA replication 19.881 16.611 n n n ruditapes_c11873 -1.212 0.602 17.382 14.336 n n n ruditapes2_c3025 -1.348 0.602 7.429 5.511 n n n ruditapes_c15980 -1.367 0.602 6.816 4.985 n n n ruditapes2_c2196 1.454 0.602 3.131 4.552 n n n ruditapes_c11293 1.485 0.602 2.788 4.14 n n n ruditapes_c17073 1.574 0.602 2.061 3.243 n y n ruditapes_c3688 -1.477 0.602 4.534 3.07 n n n ruditapes_c29990 1.724 0.602 1.378 2.375 n y n ruditapes_c22997 -1.573 0.602 3.454 2.196 n y n ruditapes_c30145 -1.624 0.602 3.057 1.883 n y n ruditapes_c15027 -1.68 0.602 h+ v1 subunit f "/// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0033180 // proton-transporting V-type ATPase, V1 domain" 2.722 1.62 n y n ruditapes_c35954 2.248 0.602 0.557 1.253 n y n ruditapes_c19293 2.518 0.602 0.409 1.03 n y n ruditapes2_c1617 -1.888 0.602 isochorismatase family protein /// 0003824 // catalytic activity /// 0042802 // identical protein binding 1.92 1.017 n y n ruditapes_c31239 -2.048 0.602 ankyrin repeat-containing protein 1.572 0.767 n y n ruditapes_c8714 -2.224 0.602 1.319 0.593 n y n ruditapes_c8809 -2.341 0.602 1.202 0.514 n y n ruditapes_c19550 -2.541 0.602 1.042 0.41 n y n ruditapes_c15137 -2.965 0.602 novel protein mouse t-cell specific gtpase 0.835 0.282 n y n ruditapes_c30412 ? 0.602 0 0.273 n y n ruditapes_c16441 ? 0.602 0 0.272 n y n ruditapes_c25674 ? 0.602 0 0.272 n y n ruditapes_c28004 ? 0.602 small g protein signaling modulator 1 /// 0005794 // Golgi apparatus /// 0032313 // regulation of Rab GTPase activity /// 0005097 // Rab GTPase activator activity 0 0.272 n y n ruditapes_c30971 ? 0.602 0 0.272 n y n ruditapes_c7481 ? 0.602 0 0.272 n y n ruditapes_c7023 ? 0.602 cathepsin l /// 0008234 // cysteine-type peptidase activity 0 0.271 n y n ruditapes_c12473 -3.336 0.602 0.727 0.218 n y n ruditapes_c10498 -? 0.602 0.272 0 n y n ruditapes_c29738 -? 0.602 0.272 0 n y n ruditapes2_c1290 -1.159 0.603 29.28 25.26 n n n ruditapes2_c1410 -1.182 0.603 histone h2a /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 22.91 19.387 n n n ruditapes_c5754 1.201 0.603 60s ribosomal protein l12 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 13.71 16.47 n n n ruditapes2_c5354 1.274 0.603 7.751 9.875 n n n ruditapes_c18974 -1.267 0.603 11.563 9.128 n n n ruditapes_c23504 1.324 0.603 5.726 7.578 n n n ruditapes_c11539 -1.307 0.603 9.115 6.973 n n n ruditapes_c27536 -1.385 0.603 6.271 4.528 n n n ruditapes_c21942 1.594 0.603 1.935 3.085 n y n ruditapes_c21965 -1.483 0.603 4.432 2.99 n n n ruditapes_c26507 -1.56 0.603 chromosome 1 open reading frame 112 3.558 2.282 n y n ruditapes_c29347 -1.583 0.603 3.342 2.111 n y n ruditapes2_lrc4938 -1.588 0.603 60s ribosomal protein l14 /// 0030529 // ribonucleoprotein complex 3.297 2.075 n y n ruditapes2_lrc5114 -1.744 0.603 2.389 1.37 n y n ruditapes2_c709 -1.752 0.603 2.366 1.35 n y n ruditapes_c29854 -1.779 0.603 2.256 1.268 n y n ruditapes_c11051 -1.839 0.603 glutathione s-transferase 2.046 1.113 n y n ruditapes2_lrc4377 3.298 0.603 metallothionein /// 0046872 // metal ion binding 0.219 0.721 n y n ruditapes_c10169 6.745 0.603 0.063 0.425 n y n ruditapes2_c2299 8.094 0.603 0.049 0.394 n y n ruditapes2_c1942 -2.718 0.603 0.937 0.345 n y n ruditapes_c16929 -2.908 0.603 hypothetical protein BRAFLDRAFT_85163 [Branchiostoma floridae] 0.851 0.293 n y n ruditapes_c15216 ? 0.603 0 0.271 n y n ruditapes_c26792 ? 0.603 0 0.271 n y n ruditapes_c16957 ? 0.603 0 0.27 n y n ruditapes2_lrc1547 -8.895 0.603 0.383 0.043 n y n ruditapes_lrc14028 -15.566 0.603 0.329 0.021 n y n ruditapes_c21525 -? 0.603 0.271 0 n y n ruditapes_c27932 -? 0.603 0.271 0 n y n ruditapes2_c2142 -1.207 0.604 17.881 14.809 n n n ruditapes_c1814 1.254 0.604 isoform d 8.881 11.134 n n n ruditapes_lrc32252 -1.346 0.604 set translocation (myeloid leukemia-associated) b /// 0048471 // perinuclear region of cytoplasm /// 0004864 // phosphoprotein phosphatase inhibitor activity /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0035067 // negative regulation of histone acetylation /// 0005783 // endoplasmic reticulum /// 0008601 // protein phosphatase type 2A regulator activity /// 0006260 // DNA replication /// 0006913 // nucleocytoplasmic transport /// 0042393 // histone binding 7.421 5.514 n n n ruditapes_c3421 -1.361 0.604 6.939 5.099 n n n ruditapes2_c2847 -1.361 0.604 6.903 5.07 n n n ruditapes_c5443 1.503 0.604 galactose soluble 3 2.582 3.88 n y n ruditapes_c9986 -1.46 0.604 4.73 3.24 n n n ruditapes2_c4007 1.627 0.604 1.747 2.843 n y n ruditapes_lrc11372 -1.498 0.604 transmembrane protein 14c 4.196 2.801 n n n ruditapes_c31291 -1.535 0.604 3.766 2.454 n y n ruditapes_c13367 1.831 0.604 1.082 1.982 n y n ruditapes_c12278 -1.807 0.604 2.146 1.188 n y n ruditapes_c27743 -1.84 0.604 2.032 1.104 n y n ruditapes_c13606 -1.853 0.604 1.997 1.078 n y n ruditapes_c18927 2.529 0.604 complement component q subcomponent-like 4 0.401 1.013 n y n ruditapes_c30896 -1.887 0.604 1.904 1.009 n y n ruditapes_c5408 2.923 0.604 stanniocalcin-like protein 0.282 0.823 n y n ruditapes_c1124 3.373 0.604 0.207 0.699 n y n ruditapes_c22237 3.597 0.604 0.181 0.652 n y n ruditapes_c3082 -2.158 0.604 thioredoxin domain-containing protein 17 /// 0004601 // peroxidase activity /// 0005515 // protein binding /// 0033209 // tumor necrosis factor-mediated signaling pathway /// 0005829 // cytosol /// 0047134 // protein-disulfide reductase activity /// 0009055 // electron carrier activity 1.388 0.643 n y n ruditapes_c2445 -2.965 0.604 0.828 0.279 n y n ruditapes_c23518 ? 0.604 thread cg12284- isoform a 0 0.269 n y n ruditapes_c8374 ? 0.604 0 0.269 n y n ruditapes_c29919 ? 0.604 0 0.268 n y n ruditapes_lrc22227 -3.336 0.604 0.719 0.216 n y n ruditapes2_lrc3914 -3.614 0.604 0.66 0.183 n y n ruditapes_c27318 -4.448 0.604 0.553 0.124 n y n ruditapes_c37276 -5.003 0.604 0.508 0.102 n y n ruditapes_c14055 -5.189 0.604 0.495 0.095 n y n ruditapes_c20738 -5.189 0.604 0.495 0.095 n y n ruditapes_lrc28580 -6.671 0.604 0.431 0.065 n y n ruditapes_c467 -7.783 0.604 0.402 0.052 n y n ruditapes_s37896 -? 0.604 0.269 0 n y n ruditapes2_c456 1.202 0.605 13.385 16.092 n n n ruditapes2_c3537 1.213 0.605 12.207 14.802 n n n ruditapes_c13879 1.213 0.605 12.129 14.719 n n n ruditapes_c4361 1.312 0.605 6.079 7.974 n n n ruditapes_lrc36052 1.341 0.605 60s ribosomal protein l9 /// 0005622 // intracellular 5.159 6.916 n n n ruditapes_c29406 -1.306 0.605 9.012 6.898 n n n ruditapes_c17156 1.36 0.605 4.664 6.341 n n n ruditapes2_c3594 1.47 0.605 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 2.9 4.263 n n n ruditapes_c12192 1.535 0.605 2.303 3.535 n y n ruditapes_c11309 -1.452 0.605 4.832 3.329 n n n ruditapes_c15750 1.616 0.605 1.792 2.895 n y n ruditapes2_c651 1.673 0.605 1.544 2.583 n y n ruditapes_c23983 1.704 0.605 1.423 2.425 n y n ruditapes_c7378 -1.57 0.605 3.422 2.18 n y n ruditapes_c25821 1.799 0.605 1.147 2.064 n y n ruditapes_c8703 -1.651 0.605 2.839 1.719 n y n ruditapes_c18216 -1.946 0.605 1.747 0.898 n y n ruditapes_c10433 3.373 0.605 0.206 0.695 n y n ruditapes_c7049 -2.144 0.605 1.399 0.653 n y n ruditapes_c21395 3.597 0.605 0.18 0.649 n y n ruditapes_lrc34234 -2.224 0.605 60s ribosomal protein l10a /// 0005811 // lipid particle /// 0006396 // RNA processing /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 1.301 0.585 n y n ruditapes_c32008 -2.446 0.605 1.09 0.446 n y n ruditapes_c21864 -2.471 0.605 1.077 0.436 n y n ruditapes_c21389 -2.718 0.605 0.925 0.34 n y n ruditapes_c27727 ? 0.605 0 0.268 n y n ruditapes_c8094 ? 0.605 0 0.267 n y n ruditapes2_c1670 -5.559 0.605 0.472 0.085 n y n ruditapes_c15338 -? 0.605 0.268 0 n y n ruditapes_c26465 -? 0.605 0.268 0 n y n ruditapes_s37297 -? 0.605 0.267 0 n y n ruditapes_c4963 1.212 0.606 12.198 14.785 n n n ruditapes_c5450 -1.244 0.606 13.294 10.688 n n n ruditapes_c22601 -1.276 0.606 10.702 8.386 n n n ruditapes_c1325 1.546 0.606 2.207 3.412 n y n ruditapes_lrc33755 -1.47 0.606 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 4.512 3.069 n n n ruditapes_c25326 -1.483 0.606 4.36 2.941 n n n ruditapes_c15581 -1.575 0.606 loc443630 protein 3.361 2.133 n y n ruditapes_c855 -1.577 0.606 3.339 2.117 n y n ruditapes_c9644 -1.583 0.606 3.287 2.077 n y n ruditapes_c18088 -1.594 0.606 3.202 2.009 n y n ruditapes_c15712 -1.711 0.606 2.507 1.465 n y n ruditapes_lrc35446 -1.751 0.606 mitochondrial ribosomal protein s18a /// 0005840 // ribosome 2.33 1.331 n y n ruditapes_c20085 -2.012 0.606 1.605 0.798 n y n ruditapes2_lrc5139 -2.03 0.606 1.567 0.772 n y n ruditapes_c24738 3.822 0.606 0.16 0.611 n y n ruditapes_lrc39210 3.822 0.606 ribosomal protein l13a /// 0030529 // ribonucleoprotein complex 0.16 0.611 n y n ruditapes_c23122 -2.224 0.606 1.293 0.581 n y n ruditapes_c31346 -2.224 0.606 1.293 0.581 n y n ruditapes_c9711 -2.594 0.606 c-type lectin a /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process 0.991 0.382 n y n ruditapes2_c4050 -2.594 0.606 0.987 0.38 n y n ruditapes_c29131 -2.78 0.606 0.893 0.321 n y n ruditapes_lrc29725 ? 0.606 0 0.267 n y n ruditapes_c12946 ? 0.606 0 0.266 n y n ruditapes_c23023 ? 0.606 0 0.266 n y n ruditapes_c23247 ? 0.606 solute carrier family 23 (nucleobase transporters) member 2 0 0.266 n y n ruditapes_c2894 ? 0.606 0 0.266 n y n ruditapes_c19473 ? 0.606 0 0.265 n y n ruditapes_c25167 ? 0.606 0 0.265 n y n ruditapes_c31579 ? 0.606 0 0.265 n y n ruditapes_c6930 -3.892 0.606 0.61 0.157 n y n ruditapes_c9217 -4.077 0.606 inhibitor of apoptosis 2 protein /// 0005488 // binding 0.586 0.144 n y n ruditapes_lrc29448 -5.003 0.606 0.502 0.1 n y n ruditapes_c17324 -5.93 0.606 0.453 0.076 n y n ruditapes_c16358 -? 0.606 0.266 0 n y n ruditapes_c30614 -? 0.606 0.266 0 n y n ruditapes_c9705 -? 0.606 0.266 0 n y n ruditapes_c18541 -1.155 0.607 30.199 26.148 n n n ruditapes_c13130 -1.281 0.607 10.393 8.116 n n n ruditapes2_c1497 1.335 0.607 5.272 7.036 n n n ruditapes_c17388 1.49 0.607 mitochondrial ribosomal protein s31 2.657 3.96 n n n ruditapes2_c2109 -1.487 0.607 nadh dehydrogenase /// 0032981 // mitochondrial respiratory chain complex I assembly /// 0022900 // electron transport chain /// 0005488 // binding /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0006979 // response to oxidative stress 4.281 2.88 n n n ruditapes_c19174 -1.827 0.607 2.042 1.118 n y n ruditapes2_c1898 -1.97 0.607 1.674 0.85 n y n ruditapes_c9434 -1.997 0.607 protein 1.619 0.811 n y n ruditapes_c17446 3.148 0.607 0.235 0.741 n y n ruditapes_s38364 5.396 0.607 0.087 0.47 n y n ruditapes2_lrc6826 5.396 0.607 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.087 0.469 n y n ruditapes_c17475 5.396 0.607 0.087 0.469 n y n ruditapes_c21626 -2.471 0.607 1.062 0.43 n y n ruditapes2_lrc3477 7.645 0.607 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0.052 0.395 n y n ruditapes_c13419 -2.669 0.607 core-binding beta subunit /// 0003700 // transcription factor activity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0001649 // osteoblast differentiation /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0030099 // myeloid cell differentiation /// 0030098 // lymphocyte differentiation /// 0048469 // cell maturation /// 0060216 // definitive hemopoiesis /// 0003702 // RNA polymerase II transcription factor activity 0.941 0.353 n y n ruditapes_c19894 ? 0.607 0 0.265 n y n ruditapes_c20400 ? 0.607 0 0.265 n y n ruditapes_c26884 ? 0.607 smap1 /// 0008060 // ARF GTPase activator activity /// 0032312 // regulation of ARF GTPase activity /// 0008270 // zinc ion binding 0 0.265 n y n ruditapes_c18031 ? 0.607 0 0.264 n y n ruditapes_c25137 ? 0.607 0 0.264 n y n ruditapes_c27066 ? 0.607 dumpy cg33196- partial 0 0.264 n y n ruditapes_s35461 ? 0.607 YGSC-1 [Lymnaea stagnalis] 0 0.264 n y n ruditapes_c12599 -3.558 0.607 0.661 0.186 n y n ruditapes_c18162 -3.558 0.607 transformation transcription domain-associated protein "/// 0006355 // regulation of transcription, DNA-dependent /// 0003713 // transcription coactivator activity /// 0035267 // NuA4 histone acetyltransferase complex /// 0016773 // phosphotransferase activity, alcohol group as acceptor /// 0007093 // mitotic cell cycle checkpoint /// 0005667 // transcription factor complex /// 0000125 // PCAF complex /// 0007165 // signal transduction /// 0016573 // histone acetylation" 0.66 0.185 n y n ruditapes_c28156 -? 0.607 0.264 0 n y n ruditapes_c7028 -? 0.607 0.264 0 n y n ruditapes_lrc30445 -? 0.607 0.264 0 n y n ruditapes_c25589 -1.159 0.608 28.509 24.591 n n n ruditapes2_c3044 -1.165 0.608 26.75 22.963 n n n ruditapes_c22775 -1.196 0.608 19.537 16.342 n n n ruditapes_c3672 -1.225 0.608 15.08 12.306 n n n ruditapes_c4199 -1.299 0.608 9.255 7.125 n n n ruditapes_c13557 -1.363 0.608 6.706 4.919 n n n ruditapes_c6066 -1.385 0.608 6.11 4.411 n n n ruditapes_lrc19458 -1.387 0.608 6.034 4.349 n n n ruditapes2_lrc4302 1.534 0.608 2.277 3.491 n y n ruditapes_c27522 -1.476 0.608 gm2 ganglioside activator /// 0044238 // primary metabolic process /// 0044464 // cell part 4.391 2.974 n n n ruditapes_c6967 -1.492 0.608 4.191 2.809 n n n ruditapes_c9167 -1.564 0.608 3.411 2.181 n y n ruditapes_c11477 -1.576 0.608 3.313 2.102 n y n ruditapes2_lrc7535 -1.687 0.608 2.588 1.534 n y n ruditapes_c25966 -1.74 0.608 2.34 1.345 n y n ruditapes2_c383 -1.827 0.608 2.035 1.114 n y n ruditapes2_c3913 2.739 0.608 phosphonoacetaldehyde hydrolase /// 0003824 // catalytic activity 0.321 0.879 n y n ruditapes_c31382 3.148 0.608 0.234 0.736 n y n ruditapes_lrc30935 -2.224 0.608 1.282 0.576 n y n ruditapes_c9218 -2.224 0.608 thiosulfate sulfurtransferase /// 0005743 // mitochondrial inner membrane 1.277 0.574 n y n ruditapes_c30290 -2.965 0.608 0.81 0.273 n y n ruditapes_c15201 ? 0.608 0 0.264 n y n ruditapes_c19686 ? 0.608 0 0.264 n y n ruditapes_c5176 ? 0.608 0 0.264 n y n ruditapes_c9388 ? 0.608 p21 -activated kinase 7 /// 0005739 // mitochondrion /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0004674 // protein serine/threonine kinase activity 0 0.264 n y n ruditapes2_c2261 ? 0.608 0 0.263 n y n ruditapes2_lrc4601 -4.003 0.608 0.588 0.147 n y n ruditapes_s33369 -5.189 0.608 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.485 0.093 n y n ruditapes_c19818 -5.559 0.608 0.464 0.084 n y n ruditapes_c7319 -5.559 0.608 0.463 0.083 n y n ruditapes2_c1249 -? 0.608 0.263 0 n y n ruditapes_lrc28125 1.161 0.609 19.813 23.013 n n n ruditapes_c11214 -1.194 0.609 19.756 16.549 n n n ruditapes_lrc36014 -1.292 0.609 mitochondrial ubiquinol cytochrome c reductase complex 9.588 7.42 n n n ruditapes_lrc18777 1.366 0.609 histone h2av /// 0005694 // chromosome 4.435 6.056 n n n ruditapes_c24969 1.403 0.609 3.716 5.214 n n n ruditapes_c17856 -1.371 0.609 6.444 4.7 n n n ruditapes_c13848 1.447 0.609 3.091 4.474 n n n ruditapes_c12589 -1.399 0.609 5.725 4.091 n n n ruditapes_c2777 -1.476 0.609 4.353 2.949 n n n ruditapes_c26772 -1.583 0.609 3.247 2.051 n y n ruditapes_c32019 -1.668 0.609 2.676 1.604 n y n ruditapes2_c4041 -1.766 0.609 iron storage protein h-ferritin /// 0046914 // transition metal ion binding /// 0065007 // biological regulation /// 0005515 // protein binding 2.227 1.261 n y n ruditapes_c16185 2.441 0.609 protein 0.429 1.047 n y n ruditapes2_c2422 2.473 0.609 mgc82900 protein 0.412 1.02 n y n ruditapes_lrc35197 2.518 0.609 countin-like protein 0.394 0.992 n y n ruditapes_c25785 2.548 0.609 0.384 0.977 n y n ruditapes2_c2279 -1.89 0.609 1.844 0.976 n y n ruditapes_c2255 -2.022 0.609 1.557 0.77 n y n ruditapes_c17671 3.148 0.609 0.233 0.735 n y n ruditapes_c3997 3.373 0.609 0.201 0.679 n y n ruditapes_c3358 3.822 0.609 brain protein i3 0.157 0.601 n y n ruditapes2_lrc6328 -2.78 0.609 0.88 0.316 n y n ruditapes_s35792 ? 0.609 0 0.262 n y n ruditapes_c12258 ? 0.609 furin-like convetase 0 0.261 n y n ruditapes_c23996 ? 0.609 isoform b 0 0.261 n y n ruditapes_c27530 ? 0.609 0 0.261 n y n ruditapes_lrc33723 -3.058 0.609 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.773 0.253 n y n ruditapes_c25963 -3.177 0.609 0.74 0.233 n y n ruditapes_lrc30025 -3.336 0.609 0.702 0.21 n y n ruditapes_lrc33436 -3.812 0.609 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.61 0.16 n y n ruditapes_c3563 -3.892 0.609 predicted protein [Nematostella vectensis] 0.599 0.154 n y n ruditapes_c30726 -5.003 0.609 0.494 0.099 n y n ruditapes_c1537 -? 0.609 0.262 0 n y n ruditapes2_c1450 -1.151 0.61 31.402 27.293 n n n ruditapes_lrc21490 -1.273 0.61 60s acidic ribosomal protein p1 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 10.657 8.37 n n n ruditapes_c31261 1.3 0.61 6.353 8.256 n n n ruditapes_c16467 -1.311 0.61 8.539 6.512 n n n ruditapes2_c97 -1.325 0.61 alpha tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 7.966 6.013 n n n ruditapes_lrc32144 1.47 0.61 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 2.815 4.136 n n n ruditapes_c17147 -1.397 0.61 5.76 4.124 n n n ruditapes_c3452 -1.476 0.61 4.34 2.941 n n n ruditapes_c7187 -1.562 0.61 c3 and pzp- alpha-2-macroglobulin domain containing partial 3.392 2.172 n y n ruditapes_lrc10478 -1.708 0.61 2.458 1.439 n y n ruditapes_c4212 -1.739 0.61 2.326 1.338 n y n ruditapes_c9182 -1.804 0.61 rgd1306153 protein 2.08 1.153 n y n ruditapes2_c1584 -1.888 0.61 1.834 0.971 n y n ruditapes_c8786 2.608 0.61 inosine-uridine preferring nucleoside hydrolase 0.358 0.935 n y n ruditapes2_lrc2234 -2.001 0.61 1.591 0.795 n y n ruditapes_c2012 -2.908 0.61 0.82 0.282 n y n ruditapes_c22675 ? 0.61 0 0.261 n y n ruditapes_lrc35933 ? 0.61 predicted protein [Nematostella vectensis] 0 0.261 n y n ruditapes_c11194 ? 0.61 sphingomyelin acid-like 3a 0 0.26 n y n ruditapes_c12683 ? 0.61 0 0.26 n y n ruditapes_c13444 ? 0.61 0 0.26 n y n ruditapes_c13595 ? 0.61 hypothetical protein [Monosiga brevicollis MX1] 0 0.26 n y n ruditapes_c23426 ? 0.61 0 0.26 n y n ruditapes_c23475 ? 0.61 family with sequence similarity member a 0 0.26 n y n ruditapes_c24073 ? 0.61 mannan-binding lectin "/// 0001867 // complement activation, lectin pathway /// 0043499 // eukaryotic cell surface binding /// 0005730 // nucleolus /// 0005537 // mannose binding /// 0016020 // membrane /// 0051635 // bacterial cell surface binding /// 0008228 // opsonization /// 0005615 // extracellular space /// 0043621 // protein self-association /// 0005783 // endoplasmic reticulum /// 0005102 // receptor binding /// 0006953 // acute-phase response" 0 0.26 n y n ruditapes_c24991 ? 0.61 0 0.26 n y n ruditapes_c17765 ? 0.61 0 0.259 n y n ruditapes_c7995 -5.401 0.61 inhibitor of apoptosis protein 1 /// 0046872 // metal ion binding /// 0009987 // cellular process /// 0005622 // intracellular 0.466 0.086 n y n ruditapes_c5711 -13.343 0.61 protein 0.327 0.025 n y n ruditapes_c27189 -? 0.61 0.261 0 n y n ruditapes_c30725 -? 0.61 0.26 0 n y n ruditapes_lrc32508 -? 0.61 developmentally-regulated vdg3 0.26 0 n y n ruditapes_c140 -1.206 0.611 cytochrome somatic "/// 0042743 // hydrogen peroxide metabolic process /// 0005759 // mitochondrial matrix /// 0006810 // transport /// 0006309 // DNA fragmentation involved in apoptosis /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0006123 // mitochondrial electron transport, cytochrome c to oxygen /// 0020037 // heme binding /// 0005746 // mitochondrial respiratory chain /// 0005625 // soluble fraction /// 0006979 // response to oxidative stress /// 0005829 // cytosol /// 0008635 // activation of caspase activity by cytochrome c /// 0045155 // electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity /// 0008289 // lipid binding" 17.424 14.443 n n n ruditapes_c8770 1.212 0.611 11.862 14.375 n n n ruditapes2_c912 -1.348 0.611 developmentally-regulated vdg3 7.082 5.252 n n n ruditapes_c29379 -1.377 0.611 leucine rich repeat containing 48 /// 0005515 // protein binding /// 0005737 // cytoplasm 6.215 4.514 n n n ruditapes2_lrc3079 1.47 0.611 2.793 4.106 n n n ruditapes_c14459 1.662 0.611 1.537 2.554 n y n ruditapes_c4747 -1.562 0.611 3.368 2.156 n y n ruditapes2_c2652 1.76 0.611 1.21 2.129 n y n ruditapes_c15485 2.006 0.611 chloride intracellular channel /// 0006979 // response to oxidative stress /// 0008340 // determination of adult lifespan 0.755 1.516 n y n ruditapes_c26464 -1.694 0.611 2.505 1.478 n y n ruditapes_c19234 -1.723 0.611 2.373 1.377 n y n ruditapes_c16136 -1.906 0.611 1.781 0.934 n y n ruditapes_c21814 2.698 0.611 dicarbonyl l-xylulose reductase /// 0005996 // monosaccharide metabolic process /// 0016491 // oxidoreductase activity /// 0044464 // cell part 0.327 0.883 n y n ruditapes_c14592 4.947 0.611 0.098 0.485 n y n ruditapes_c24629 -2.395 0.611 1.098 0.458 n y n ruditapes_c18583 -2.566 0.611 0.977 0.381 n y n ruditapes_c24851 -2.718 0.611 0.896 0.33 n y n ruditapes_c11514 ? 0.611 0 0.259 n y n ruditapes_c13854 ? 0.611 tbc1 domain member 4 0 0.259 n y n ruditapes_c26030 ? 0.611 0 0.259 n y n ruditapes_c8667 ? 0.611 0 0.259 n y n ruditapes2_c2324 ? 0.611 tripartite motif-containing 33 /// 0044238 // primary metabolic process /// 0005488 // binding /// 0005622 // intracellular /// 0034960 // cellular biopolymer metabolic process 0 0.258 n y n ruditapes_c17263 -3.336 0.611 0.693 0.208 n y n ruditapes_c20805 -3.336 0.611 0.693 0.208 n y n ruditapes2_c6543 -4.448 0.611 0.531 0.119 n y n ruditapes_c33545 -5.189 0.611 0.475 0.092 n y n ruditapes_s38528 -8.895 0.611 kallikrein plasma (fletcher factor) 1 0.366 0.041 n y n ruditapes_c24597 -? 0.611 0.259 0 n y n ruditapes_c25204 -? 0.611 0.259 0 n y n ruditapes_c24272 -? 0.611 0.258 0 n y n ruditapes_c27665 -? 0.611 0.258 0 n y n ruditapes2_c2697 -1.269 0.612 10.82 8.527 n n n ruditapes2_c2489 -1.36 0.612 6.665 4.902 n n n ruditapes_c9681 -1.404 0.612 5.55 3.954 n n n ruditapes_c6558 -1.459 0.612 4.531 3.106 n n n ruditapes_c786 -1.688 0.612 2.528 1.497 n y n ruditapes2_c3030 -1.699 0.612 hypothetical protein [Dictyostelium discoideum AX4] 2.473 1.456 n y n ruditapes_c29472 2.248 0.612 0.528 1.187 n y n ruditapes2_c1519 -1.79 0.612 tyrosine recombinase 2.109 1.178 n y n ruditapes_c17241 -1.863 0.612 1.875 1.006 n y n ruditapes_c6546 -1.977 0.612 eukaryotic translation initiation factor 3 subunit 2 beta 36 kda variant 1 /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005829 // cytosol 1.615 0.817 n y n ruditapes2_c2047 -2.224 0.612 predicted protein [Nematostella vectensis] 1.248 0.561 n y n ruditapes_c37119 -2.383 0.612 1.1 0.462 n y n ruditapes_c5606 5.846 0.612 0.075 0.437 n y n ruditapes_c27741 5.846 0.612 notch receptor protein 0.075 0.436 n y n ruditapes_c25762 -2.541 0.612 0.987 0.388 n y n ruditapes_c29436 -2.718 0.612 0.89 0.327 n y n ruditapes_lrc35771 ? 0.612 mgc64417 protein /// 0003824 // catalytic activity 0 0.258 n y n ruditapes_c20987 ? 0.612 0 0.257 n y n ruditapes_c23406 ? 0.612 0 0.257 n y n ruditapes_c26121 ? 0.612 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0 0.257 n y n ruditapes_c8548 ? 0.612 0 0.257 n y n ruditapes_c8832 ? 0.612 0 0.257 n y n ruditapes_lrc17748 ? 0.612 0 0.257 n y n ruditapes_c19625 -4.448 0.612 0.529 0.119 n y n ruditapes_c14446 -11.119 0.612 0.339 0.031 n y n ruditapes2_c1425 -? 0.612 0.257 0 n y n ruditapes_c12711 -? 0.612 0.257 0 n y n ruditapes_c20998 -1.357 0.613 cg3918 cg3918-pa 6.701 4.938 n n n ruditapes_c21596 -1.406 0.613 5.479 3.897 n n n ruditapes_c26887 1.507 0.613 2.413 3.637 n y n ruditapes2_c3050 1.699 0.613 1.379 2.342 n y n ruditapes_lrc17649 -1.656 0.613 2.69 1.624 n y n ruditapes_c21572 -1.68 0.613 protein 2.552 1.519 n y n ruditapes_c24703 -1.701 0.613 2.456 1.444 n y n ruditapes_c26009 2.248 0.613 0.526 1.183 n y n ruditapes_c31363 -1.853 0.613 1.899 1.024 n y n ruditapes_c26777 -2.224 0.613 1.242 0.559 n y n ruditapes_c16087 -2.224 0.613 1.24 0.558 n y n ruditapes_lrc8570 -2.409 0.613 1.072 0.445 n y n ruditapes_c10054 ? 0.613 0 0.256 n y n ruditapes_c23170 ? 0.613 0 0.256 n y n ruditapes_c24605 ? 0.613 0 0.256 n y n ruditapes_c5724 ? 0.613 0 0.256 n y n ruditapes_lrc29500 ? 0.613 0 0.255 n y n ruditapes_c2519 -3.494 0.613 0.653 0.187 n y n ruditapes_lrc10396 -5.559 0.613 40s ribosomal protein s10 0.451 0.081 n y n ruditapes_c17409 -? 0.613 0.256 0 n y n ruditapes_c19448 -? 0.613 0.256 0 n y n ruditapes_c19454 -? 0.613 0.256 0 n y n ruditapes_c20689 -? 0.613 class a rhodopsin-like g-protein coupled receptor 0.256 0 n y n ruditapes_c11121 -1.166 0.614 25.477 21.847 n n n ruditapes_c24134 -1.313 0.614 8.289 6.312 n n n ruditapes_c9673 1.476 0.614 2.695 3.977 n n n ruditapes_c19431 1.594 0.614 1.816 2.895 n y n ruditapes_c27300 -1.508 0.614 3.845 2.549 n y n ruditapes_c10358 -1.544 0.614 light-induced brain protein 44 3.476 2.252 n y n ruditapes_c21105 1.743 0.614 1.237 2.156 n y n ruditapes_c11135 -1.613 0.614 2.932 1.817 n y n ruditapes2_c702 2.126 0.614 0.617 1.311 n y n ruditapes_c7031 -1.779 0.614 2.125 1.194 n y n ruditapes_lrc35434 -1.779 0.614 2.118 1.191 n y n ruditapes2_lrc5817 2.417 0.614 calponin homolog 0.428 1.034 n y n ruditapes_c8322 -2.03 0.614 1.497 0.737 n y n ruditapes_c27060 5.396 0.614 0.084 0.451 n y n ruditapes_s40343 -2.594 0.614 0.945 0.364 n y n ruditapes_lrc38506 -2.718 0.614 nadh: oxidoreductase subunit /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0008340 // determination of adult lifespan /// 0040035 // hermaphrodite genitalia development /// 0009792 // embryonic development ending in birth or egg hatching 0.879 0.323 n y n ruditapes_c22167 ? 0.614 inner membrane mitochondrial 0 0.255 n y n ruditapes_c6545 ? 0.614 0 0.255 n y n ruditapes_c8208 ? 0.614 0 0.255 n y n ruditapes_c14294 ? 0.614 0 0.254 n y n ruditapes_c35099 ? 0.614 0 0.254 n y n ruditapes_c22021 -3.892 0.614 0.582 0.15 n y n ruditapes_c30150 -? 0.614 0.255 0 n y n ruditapes_c9559 -1.263 0.615 orf2-encoded protein 11.084 8.775 n n n ruditapes_c14221 -1.278 0.615 small nuclear ribonucleoprotein polypeptide n /// 0042802 // identical protein binding /// 0005654 // nucleoplasm /// 0009725 // response to hormone stimulus /// 0005685 // U1 snRNP /// 0005829 // cytosol /// 0005686 // U2 snRNP /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 10.063 7.875 n n n ruditapes_c10768 -1.303 0.615 8.69 6.669 n n n ruditapes_c8961 -1.375 0.615 6.116 4.446 n n n ruditapes2_c1823 -1.39 0.615 nup205 protein 5.774 4.154 n n n ruditapes_c9001 -1.442 0.615 cleavage and polyadenylation specific factor 5 "/// 0042382 // paraspeckles /// 0005515 // protein binding /// 0005849 // mRNA cleavage factor complex /// 0005813 // centrosome /// 0003723 // RNA binding /// 0016787 // hydrolase activity /// 0000398 // nuclear mRNA splicing, via spliceosome" 4.739 3.287 n n n ruditapes_c23099 1.599 0.615 1.779 2.845 n y n ruditapes_c19835 -1.515 0.615 3.763 2.484 n y n ruditapes_lrc29260 -1.532 0.615 3.581 2.338 n y n ruditapes_c17983 1.699 0.615 1.364 2.318 n y n ruditapes2_c1467 -1.541 0.615 3.476 2.255 n y n ruditapes_c9002 -1.588 0.615 3.099 1.951 n y n ruditapes2_c1266 -1.588 0.615 AF339450_1hillarin [Hirudo medicinalis] 3.093 1.947 n y n ruditapes_c14616 1.833 0.615 1.013 1.858 n y n ruditapes_c30501 -1.662 0.615 2.616 1.574 n y n ruditapes2_c659 2.149 0.615 0.593 1.274 n y n ruditapes2_lrc6365 -1.837 0.615 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 1.923 1.047 n y n ruditapes_c8670 -1.994 0.615 hypothetical protein [Schistosoma mansoni] 1.553 0.779 n y n ruditapes2_c1660 3.148 0.615 type alpha isoform cra_b /// 0005578 // proteinaceous extracellular matrix 0.225 0.709 n y n ruditapes_lrc34188 -2.395 0.615 ubiquinol-cytochrome c complex iii subunit /// 0005739 // mitochondrion /// 0016020 // membrane 1.074 0.448 n y n ruditapes_c13845 -2.395 0.615 1.072 0.447 n y n ruditapes_c1916 8.544 0.615 0.042 0.361 n y n ruditapes_c15490 -2.718 0.615 0.875 0.322 n y n ruditapes_c30044 -2.908 0.615 dab2 interacting protein 0.797 0.274 n y n ruditapes_c16422 ? 0.615 0 0.254 n y n ruditapes_c19363 ? 0.615 0 0.254 n y n ruditapes_c22866 ? 0.615 0 0.254 n y n ruditapes_c28187 ? 0.615 0 0.254 n y n ruditapes_c30664 ? 0.615 0 0.254 n y n ruditapes_lrc32087 ? 0.615 0 0.254 n y n ruditapes_lrc35608 ? 0.615 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0.254 n y n ruditapes_c21828 ? 0.615 dynein heavy chain 0 0.253 n y n ruditapes_c23781 -3.892 0.615 0.58 0.149 n y n ruditapes_c24031 -4.448 0.615 0.52 0.117 n y n ruditapes_c25933 -4.448 0.615 0.52 0.117 n y n ruditapes_c20199 -5.189 0.615 0.465 0.09 n y n ruditapes_c24118 -6.671 0.615 0.404 0.061 n y n ruditapes_s39958 -? 0.615 predicted protein [Nematostella vectensis] 0.253 0 n y n ruditapes2_c1953 -? 0.615 0.252 0 n y n ruditapes_c8442 1.246 0.616 8.778 10.941 n n n ruditapes_c10399 -1.306 0.616 8.532 6.534 n n n ruditapes_c21588 -1.354 0.616 6.695 4.946 n n n ruditapes2_c3012 -1.402 0.616 5.458 3.894 n n n ruditapes_c29187 -1.43 0.616 myosin heavy chain /// 0005524 // ATP binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0003779 // actin binding /// 0005863 // striated muscle thick filament 4.91 3.434 n n n ruditapes2_lrc4233 -1.668 0.616 2.572 1.542 n y n ruditapes_c2372 2.286 0.616 acyl- synthetase long-chain family member isoform cra_a "/// 0010033 // response to organic substance /// 0044446 // intracellular organelle part /// 0000267 // cell fraction /// 0005739 // mitochondrion /// 0006631 // fatty acid metabolic process /// 0031090 // organelle membrane /// 0016877 // ligase activity, forming carbon-sulfur bonds /// 0005783 // endoplasmic reticulum /// 0005777 // peroxisome" 0.492 1.125 n y n ruditapes_c25532 -1.868 0.616 1.83 0.98 n y n ruditapes_c15875 -1.927 0.616 1.684 0.874 n y n ruditapes2_lrc4687 2.698 0.616 calcium-binding ef-hand domain protein 0.32 0.862 n y n ruditapes_c21637 2.698 0.616 0.318 0.859 n y n ruditapes_c28743 -2.059 0.616 hypothetical protein BRAFLDRAFT_75068 [Branchiostoma floridae] 1.437 0.698 n y n ruditapes_c25134 -2.224 0.616 1.225 0.551 n y n ruditapes_c12695 4.197 0.616 glutathione s-transferase 0.127 0.534 n y n ruditapes_lrc34212 4.947 0.616 stanniocalcin-like protein 0.096 0.472 n y n ruditapes_c20617 -2.718 0.616 0.87 0.32 n y n ruditapes_c16382 ? 0.616 0 0.252 n y n ruditapes_c18784 ? 0.616 0 0.252 n y n ruditapes_c23476 ? 0.616 0 0.252 n y n ruditapes_s37669 ? 0.616 0 0.252 n y n ruditapes_c20300 ? 0.616 0 0.251 n y n ruditapes_c29387 ? 0.616 0 0.251 n y n ruditapes_c7625 ? 0.616 t7358_hadsp ame: full=atracotoxin-hs20f7358 short= x-hs20f7358 flags: precursor 0 0.251 n y n ruditapes_c20344 -3.336 0.616 0.674 0.202 n y n ruditapes_c28276 -4.448 0.616 0.517 0.116 n y n ruditapes_c12826 -4.448 0.616 0.516 0.116 n y n ruditapes_c17006 -4.448 0.616 glycine-rich protein 0.515 0.116 n y n ruditapes_c12334 -? 0.616 0.251 0 n y n ruditapes2_lrc5785 1.122 0.617 actin /// 0005488 // binding 31.906 35.798 n n n ruditapes2_c470 1.237 0.617 9.331 11.546 n n n ruditapes_c11975 -1.24 0.617 12.834 10.352 n n n ruditapes2_c1732 -1.421 0.617 5.05 3.554 n n n ruditapes_c11313 1.534 0.617 2.155 3.307 n y n ruditapes_c12753 -1.472 0.617 4.232 2.874 n n n ruditapes_lrc34984 -1.483 0.617 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 4.097 2.764 n n n ruditapes_c6596 -1.51 0.617 3.752 2.484 n y n ruditapes2_c599 -1.588 0.617 n-acetylneuraminate pyruvate lyase 3.051 1.921 n y n ruditapes_c325 -1.597 0.617 2.991 1.872 n y n ruditapes_c23218 1.999 0.617 0.739 1.477 n y n ruditapes_c17110 2.428 0.617 patterned expression site family member (pes-22) 0.415 1.008 n y n ruditapes_c21764 -2.395 0.617 1.061 0.443 n y n ruditapes_c12797 ? 0.617 angiopoietin-like 7 0 0.25 n y n ruditapes_c14610 ? 0.617 0 0.25 n y n ruditapes_c31489 ? 0.617 0 0.25 n y n ruditapes_c8368 ? 0.617 tyrosine-protein kinase transmembrane receptor ror2 /// 0005524 // ATP binding /// 0006468 // protein amino acid phosphorylation /// 0005886 // plasma membrane /// 0004714 // transmembrane receptor protein tyrosine kinase activity /// 0016021 // integral to membrane /// 0007169 // transmembrane receptor protein tyrosine kinase signaling pathway 0 0.25 n y n ruditapes_lrc36133 ? 0.617 cysteine protease inhibitor 0 0.25 n y n ruditapes_c25393 -3.336 0.617 0.67 0.201 n y n ruditapes_lrc17464 -3.558 0.617 0.624 0.175 n y n ruditapes_c15155 -3.892 0.617 asialoglycoprotein receptor 1 /// 0005515 // protein binding /// 0050896 // response to stimulus /// 0009987 // cellular process /// 0004872 // receptor activity 0.572 0.147 n y n ruditapes_c30751 -4.448 0.617 protein 0.514 0.115 n y n ruditapes_s39766 -? 0.617 0.251 0 n y n ruditapes2_c942 -1.086 0.618 cytochrome oxidase subunit 1 90.182 83.033 n n n ruditapes_c25001 -1.2 0.618 17.693 14.746 n n n ruditapes_s38316 1.279 0.618 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 6.903 8.83 n n n ruditapes_c12214 1.29 0.618 c20orf152 protein 6.448 8.318 n n n ruditapes_c24769 -1.346 0.618 6.854 5.091 n n n ruditapes_c10209 -1.466 0.618 cln3 protein /// 0044425 // membrane part /// 0044267 // cellular protein metabolic process /// 0043066 // negative regulation of apoptosis /// 0031410 // cytoplasmic vesicle /// 0060255 // regulation of macromolecule metabolic process /// 0006865 // amino acid transport /// 0005794 // Golgi apparatus /// 0044446 // intracellular organelle part /// 0031324 // negative regulation of cellular metabolic process /// 0005768 // endosome /// 0005515 // protein binding /// 0016044 // membrane organization /// 0005764 // lysosome /// 0016236 // macroautophagy /// 0007040 // lysosome organization /// 0030003 // cellular cation homeostasis /// 0006672 // ceramide metabolic process /// 0019226 // transmission of nerve impulse 4.285 2.922 n n n ruditapes_c23397 1.606 0.618 1.721 2.764 n y n ruditapes_c24359 1.641 0.618 1.559 2.559 n y n ruditapes_c23775 -1.575 0.618 3.131 1.988 n y n ruditapes2_lrc4869 -1.624 0.618 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 2.8 1.725 n y n ruditapes_c15457 -1.631 0.618 comm domain containing 6 2.757 1.691 n y n ruditapes_s36581 -2.224 0.618 1.208 0.543 n y n ruditapes2_c2051 -2.341 0.618 c-type lectin a 1.099 0.469 n y n ruditapes_c7622 -2.409 0.618 1.045 0.434 n y n ruditapes_c19814 -2.409 0.618 1.041 0.432 n y n ruditapes_c14447 -2.669 0.618 0.884 0.331 n y n ruditapes_c9057 -2.718 0.618 0.861 0.317 n y n ruditapes_c25550 -2.78 0.618 0.834 0.3 n y n ruditapes_c21906 ? 0.618 0 0.249 n y n ruditapes_c9827 ? 0.618 0 0.249 n y n ruditapes_s36972 ? 0.618 cg8844 0 0.249 n y n ruditapes_c2336 ? 0.618 0 0.248 n y n ruditapes_s40052 -3.336 0.618 0.667 0.2 n y n ruditapes_c29021 -3.558 0.618 0.622 0.175 n y n ruditapes2_lrc6397 -5.559 0.618 0.439 0.079 n y n ruditapes_c31279 -5.559 0.618 0.439 0.079 n y n ruditapes_lrc14232 -5.93 0.618 0.423 0.071 n y n ruditapes_c701 -7.783 0.618 0.372 0.048 n y n ruditapes_lrc33645 -8.895 0.618 developmentally-regulated vdg3 0.352 0.04 n y n ruditapes_c2585 -? 0.618 0.249 0 n y n ruditapes_lrc22696 -? 0.618 serine proteinase inhibitor - 0.249 0 n y n ruditapes_c18868 -? 0.618 0.248 0 n y n ruditapes2_c2684 -1.206 0.619 16.626 13.782 n n n ruditapes_c2405 -1.239 0.619 12.754 10.292 n n n ruditapes_c31540 -1.248 0.619 12.002 9.615 n n n ruditapes_c5287 -1.258 0.619 11.178 8.883 n n n ruditapes_c10991 -1.303 0.619 8.532 6.55 n n n ruditapes2_c1897 -1.304 0.619 8.435 6.467 n n n ruditapes_c1991 1.403 0.619 3.515 4.931 n n n ruditapes_c20951 -1.433 0.619 4.784 3.338 n n n ruditapes_c30307 -1.436 0.619 4.718 3.285 n n n ruditapes_c14824 -1.438 0.619 4.684 3.258 n n n ruditapes_c28486 -1.458 0.619 4.38 3.005 n n n ruditapes2_c2348 -1.497 0.619 3.875 2.588 n n n ruditapes_c20997 -1.518 0.619 aldo keto reductase 3.648 2.404 n y n ruditapes2_lrc5909 1.686 0.619 1.375 2.318 n y n ruditapes_s36373 1.702 0.619 beta-tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 1.326 2.257 n y n ruditapes2_c896 1.799 0.619 1.062 1.911 n y n ruditapes_c18345 1.836 0.619 0.983 1.806 n y n ruditapes_c30680 -1.687 0.619 2.438 1.445 n y n ruditapes_c20804 -1.694 0.619 2.406 1.42 n y n ruditapes2_lrc1883 -1.779 0.619 glutathione s- /// 0005515 // protein binding 2.058 1.157 n y n ruditapes_c18098 -1.868 0.619 1.794 0.96 n y n ruditapes_c23759 -1.897 0.619 1.727 0.91 n y n ruditapes_c27264 3.373 0.619 0.19 0.64 n y n ruditapes_c7542 3.597 0.619 0.167 0.602 n y n ruditapes_lrc32126 3.822 0.619 macrophage migration inhibitory factor 2 0.148 0.567 n y n ruditapes_c7682 7.195 0.619 0.052 0.377 n y n ruditapes2_lrc3172 ? 0.619 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0.248 n y n ruditapes_c10468 ? 0.619 snf2-related domain-containing protein 0 0.248 n y n ruditapes_c22038 ? 0.619 f5 8 type c domain protein 0 0.248 n y n ruditapes_c25013 ? 0.619 0 0.248 n y n ruditapes_c26973 ? 0.619 0 0.248 n y n ruditapes_c18410 ? 0.619 0 0.247 n y n ruditapes_c21108 -3.336 0.619 0.662 0.199 n y n ruditapes_c14389 -3.558 0.619 0.617 0.173 n y n ruditapes_c29420 -3.892 0.619 0.568 0.146 n y n ruditapes_c11047 -4.448 0.619 0.508 0.114 n y n ruditapes_lrc34780 -4.448 0.619 0.508 0.114 n y n ruditapes_c19264 -5.559 0.619 0.437 0.079 n y n ruditapes_c28912 -? 0.619 0.248 0 n y n ruditapes_c17176 -? 0.619 0.247 0 n y n ruditapes_c9970 -? 0.619 0.247 0 n y n ruditapes2_c1636 1.068 0.62 89.468 95.586 n n n ruditapes_c7371 -1.268 0.62 10.444 8.238 n n n ruditapes2_c1834 -1.28 0.62 9.667 7.554 n n n ruditapes2_c2886 -1.313 0.62 8.004 6.095 n n n ruditapes_c7616 1.499 0.62 2.391 3.584 n n n ruditapes_c22408 -1.443 0.62 4.587 3.179 n n n ruditapes_c19340 -1.483 0.62 protein 4.02 2.712 n n n ruditapes_c1469 -1.495 0.62 3.855 2.578 n n n ruditapes2_c2125 -1.528 0.62 cathepsin l 3.518 2.302 n y n ruditapes_c30978 -1.623 0.62 2.769 1.706 n y n ruditapes_lrc27402 1.991 0.62 0.733 1.461 n y n ruditapes_c4793 -1.73 0.62 2.237 1.293 n y n ruditapes_c30967 2.248 0.62 0.505 1.135 n y n ruditapes2_c3942 3.448 0.62 ring-box 1 /// 0044267 // cellular protein metabolic process /// 0044444 // cytoplasmic part /// 0005515 // protein binding /// 0000151 // ubiquitin ligase complex /// 0030163 // protein catabolic process 0.181 0.624 n y n ruditapes_c23539 3.747 0.62 udp-galactose-4-epimerase /// 0008152 // metabolic process /// 0044424 // intracellular part /// 0016853 // isomerase activity 0.153 0.575 n y n ruditapes_s34389 4.947 0.62 0.093 0.46 n y n ruditapes_c18173 5.396 0.62 0.081 0.437 n y n ruditapes_lrc33130 -2.628 0.62 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.893 0.34 n y n ruditapes_c7564 -2.891 0.62 hydroxymethylbilane synthase /// 0031406 // carboxylic acid binding /// 0050662 // coenzyme binding /// 0005739 // mitochondrion /// 0033014 // tetrapyrrole biosynthetic process /// 0005634 // nucleus /// 0043176 // amine binding /// 0004418 // hydroxymethylbilane synthase activity 0.78 0.27 n y n ruditapes_c26733 ? 0.62 0 0.246 n y n ruditapes_c7491 ? 0.62 complement component q subcomponent-like 4 /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 0 0.246 n y n ruditapes_c12876 ? 0.62 0 0.245 n y n ruditapes_c16328 ? 0.62 0 0.245 n y n ruditapes_c18464 ? 0.62 0 0.245 n y n ruditapes_c13528 -3.892 0.62 cytochrome p450 family 4 0.564 0.145 n y n ruditapes_c8468 -3.892 0.62 0.563 0.145 n y n ruditapes_s33472 -4.003 0.62 0.55 0.137 n y n ruditapes_lrc38212 -4.448 0.62 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0065009 // regulation of molecular function /// 0005901 // caveola /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0016049 // cell growth /// 0003012 // muscle system process /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0007520 // myoblast fusion /// 0032947 // protein complex scaffold /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0007204 // elevation of cytosolic calcium ion concentration /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0.504 0.113 n y n ruditapes_c12391 -5.559 0.62 0.434 0.078 n y n ruditapes_c20115 -5.559 0.62 0.434 0.078 n y n ruditapes_c26278 -5.559 0.62 0.434 0.078 n y n ruditapes2_c4241 -7.783 0.62 sarcoplasmic calcium-binding protein 0.366 0.047 n y n ruditapes_c16662 -7.783 0.62 0.366 0.047 n y n ruditapes_c10647 -8.895 0.62 0.349 0.039 n y n ruditapes_s36153 -8.895 0.62 0.348 0.039 n y n ruditapes2_c1312 -? 0.62 0.246 0 n y n ruditapes2_c2154 -? 0.62 0.246 0 n y n ruditapes_c4442 -? 0.62 0.246 0 n y n ruditapes_c17356 1.233 0.621 9.404 11.596 n n n ruditapes_c22783 -1.277 0.621 9.78 7.659 n n n ruditapes_c21744 1.335 0.621 4.872 6.502 n n n ruditapes_c22855 -1.319 0.621 7.706 5.843 n n n ruditapes_lrc36567 -1.401 0.621 calmodulin /// 0048856 // anatomical structure development /// 0006996 // organelle organization /// 0048518 // positive regulation of biological process /// 0043005 // neuron projection /// 0044456 // synapse part /// 0004674 // protein serine/threonine kinase activity /// 0050793 // regulation of developmental process /// 0007049 // cell cycle /// 0009968 // negative regulation of signal transduction /// 0017022 // myosin binding /// 0051049 // regulation of transport /// 0007611 // learning or memory /// 0044424 // intracellular part /// 0048869 // cellular developmental process /// 0007619 // courtship behavior /// 0009790 // embryonic development /// 0016059 // deactivation of rhodopsin mediated signaling 5.337 3.81 n n n ruditapes_c17333 -1.402 0.621 5.297 3.779 n n n ruditapes_c17066 -1.417 0.621 4.993 3.524 n n n ruditapes_c12687 -1.468 0.621 4.197 2.859 n n n ruditapes_c31522 -1.483 0.621 3.996 2.695 n n n ruditapes_c30948 1.623 0.621 52k active chromatin boundary protein "/// 0035062 // omega speckle /// 0001745 // compound eye morphogenesis /// 0006376 // mRNA splice site selection /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0000166 // nucleotide binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome" 1.61 2.612 n y n ruditapes2_c6299 -1.504 0.621 ribosomal protein l10 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.745 2.49 n y n ruditapes_c14926 1.719 0.621 1.254 2.156 n y n ruditapes_lrc35517 -1.547 0.621 60s ribosomal protein l13 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 3.317 2.144 n y n ruditapes_lrc33034 1.881 0.621 nadh dehydrogenase /// 0005739 // mitochondrion 0.89 1.674 n y n ruditapes2_lrc5580 -1.668 0.621 ribosomal protein l7a /// 0030529 // ribonucleoprotein complex 2.504 1.501 n y n ruditapes_c19753 -1.779 0.621 2.032 1.142 n y n ruditapes_c20736 2.323 0.621 0.457 1.063 n y n ruditapes_c14675 -2.001 0.621 nuclear transport 1.494 0.747 n y n ruditapes_s39500 2.998 0.621 hypothetical protein BRAFLDRAFT_125501 [Branchiostoma floridae] 0.243 0.728 n y n ruditapes_c22969 -2.224 0.621 1.192 0.536 n y n ruditapes_lrc32462 5.396 0.621 0.08 0.434 n y n ruditapes_c15696 -2.409 0.621 1.028 0.427 n y n ruditapes_lrc32950 -2.669 0.621 gm2 activator protein 0.871 0.326 n y n ruditapes2_lrc3554 ? 0.621 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0.245 n y n ruditapes_c17090 ? 0.621 troponin c 0 0.245 n y n ruditapes_c21304 ? 0.621 f5 8 type c domain protein 0 0.245 n y n ruditapes_c29346 ? 0.621 0 0.245 n y n ruditapes_c17950 ? 0.621 0 0.244 n y n ruditapes_c25122 ? 0.621 0 0.244 n y n ruditapes_c4655 ? 0.621 selenium binding protein 1 /// 0015031 // protein transport /// 0005634 // nucleus /// 0016020 // membrane /// 0010197 // polar nucleus fusion /// 0008430 // selenium binding /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0046686 // response to cadmium ion 0 0.244 n y n ruditapes_lrc35859 -4.448 0.621 0.501 0.113 n y n ruditapes_c22933 -5.559 0.621 0.432 0.078 n y n ruditapes_c22223 -6.671 0.621 0.391 0.059 n y n ruditapes_c23356 -? 0.621 0.245 0 n y n ruditapes_c12357 -? 0.621 0.244 0 n y n ruditapes_c17756 -? 0.621 0.244 0 n y n ruditapes_c23624 -? 0.621 0.244 0 n y n ruditapes_c25220 -? 0.621 0.244 0 n y n ruditapes_s35402 -? 0.621 0.244 0 n y n ruditapes_lrc32504 1.2 0.622 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 12.504 15 n n n ruditapes_c24541 -1.203 0.622 16.914 14.062 n n n ruditapes_c3318 -1.296 0.622 8.684 6.699 n n n ruditapes_c2554 -1.368 0.622 20s proteasome subunit alpha 8 /// 0000502 // proteasome complex /// 0008283 // cell proliferation /// 0000022 // mitotic spindle elongation /// 0004175 // endopeptidase activity 6.055 4.425 n n n ruditapes2_c2628 -1.547 0.622 3.303 2.135 n y n ruditapes_c21365 -1.634 0.622 2.681 1.641 n y n ruditapes_c13693 1.999 0.622 0.719 1.437 n y n ruditapes_lrc34757 -2.001 0.622 hypothetical protein PE36_03526 [Moritella sp. PE36] 1.481 0.74 n y n ruditapes_c20486 3.597 0.622 0.165 0.592 n y n ruditapes_c27000 -2.15 0.622 1.265 0.589 n y n ruditapes_c20274 -2.859 0.622 0.783 0.274 n y n ruditapes_lrc35262 ? 0.622 0 0.244 n y n ruditapes_c17109 ? 0.622 0 0.243 n y n ruditapes_c17299 ? 0.622 0 0.243 n y n ruditapes_c27194 ? 0.622 0 0.243 n y n ruditapes_c304 ? 0.622 inhibitor of apoptosis protein /// 0005488 // binding 0 0.243 n y n ruditapes_c31488 ? 0.622 0 0.243 n y n ruditapes_c31868 ? 0.622 0 0.243 n y n ruditapes_c6024 ? 0.622 0 0.243 n y n ruditapes_c6944 ? 0.622 0 0.242 n y n ruditapes_c38801 -4.448 0.622 von willebrand factor c and egf domains 0.499 0.112 n y n ruditapes_c36557 -1.146 0.623 cysteine rich transmembrane bmp regulator 1 (chordin like) /// 0032502 // developmental process 31.086 27.137 n n n ruditapes_c27607 1.18 0.623 14.977 17.674 n n n ruditapes_c7748 -1.401 0.623 5.252 3.749 n n n ruditapes_c20628 -1.424 0.623 4.815 3.381 n n n ruditapes_c21421 -1.812 0.623 1.913 1.056 n y n ruditapes_c22104 -1.827 0.623 1.861 1.019 n y n ruditapes_c9967 2.586 0.623 pe-pgrs family protein 0.34 0.879 n y n ruditapes_lrc15839 3.485 0.623 lethal neo18 0.174 0.605 n y n ruditapes_s35375 4.497 0.623 0.108 0.486 n y n ruditapes_c4132 -2.78 0.623 0.813 0.292 n y n ruditapes_c26114 ? 0.623 0 0.242 n y n ruditapes_c9490 ? 0.623 0 0.242 n y n ruditapes_c14235 ? 0.623 0 0.241 n y n ruditapes_c31671 ? 0.623 0 0.241 n y n ruditapes2_lrc6604 -3.558 0.623 0.605 0.17 n y n ruditapes2_c1710 -3.892 0.623 megf11 protein 0.556 0.143 n y n ruditapes_c4997 -3.892 0.623 atp synthase gamma subunit "/// 0005811 // lipid particle /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0006911 // phagocytosis, engulfment /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 0.555 0.143 n y n ruditapes_lrc26567 -4.003 0.623 0.542 0.135 n y n ruditapes_c4434 -4.448 0.623 0.495 0.111 n y n ruditapes_c12737 -8.895 0.623 0.342 0.038 n y n ruditapes_c14613 -? 0.623 0.242 0 n y n ruditapes_c19031 -? 0.623 0.242 0 n y n ruditapes_c22825 -? 0.623 0.242 0 n y n ruditapes_c13029 -? 0.623 0.241 0 n y n ruditapes_c20196 -? 0.623 0.241 0 n y n ruditapes_c22229 -? 0.623 0.241 0 n y n ruditapes2_c845 -1.222 0.624 14.155 11.584 n n n ruditapes_c15016 -1.299 0.624 8.451 6.507 n n n ruditapes_c3529 -1.307 0.624 proteasome subunit alpha type-4 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0042802 // identical protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 8.071 6.176 n n n ruditapes_c1980 -1.337 0.624 apoptosis-linked protein 2 /// 0046330 // positive regulation of JNK cascade 6.917 5.174 n n n ruditapes_c18972 -1.368 0.624 5.99 4.377 n n n ruditapes_lrc15328 1.535 0.624 2.063 3.168 n y n ruditapes2_c1904 -1.455 0.624 4.306 2.96 n n n ruditapes_c18025 -1.483 0.624 3.933 2.653 n n n ruditapes_c27587 -1.491 0.624 3.823 2.564 n n n ruditapes2_c2211 1.838 0.624 0.952 1.749 n y n ruditapes_c22833 -1.636 0.624 2.633 1.609 n y n ruditapes2_c1845 2.056 0.624 0.648 1.331 n y n ruditapes_c20626 -1.906 0.624 1.655 0.868 n y n ruditapes2_lrc6606 2.998 0.624 mitochondrial cytochrome c oxidase subunit 5a 0.238 0.714 n y n ruditapes_c26185 -2.1 0.624 1.317 0.627 n y n ruditapes_c29404 -2.224 0.624 1.169 0.526 n y n ruditapes_c22144 4.497 0.624 0.107 0.483 n y n ruditapes_c14406 -2.347 0.624 1.055 0.449 n y n ruditapes_lrc38774 -2.859 0.624 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation 0.777 0.272 n y n ruditapes_c14948 ? 0.624 0 0.241 n y n ruditapes_c12641 ? 0.624 retrotransposon unclassified 0 0.24 n y n ruditapes_c21232 ? 0.624 0 0.24 n y n ruditapes_c22270 ? 0.624 mitogen-activated protein kinase 11 /// 0005488 // binding /// 0004674 // protein serine/threonine kinase activity /// 0009987 // cellular process /// 0044464 // cell part 0 0.24 n y n ruditapes_lrc31655 -3.494 0.624 0.613 0.175 n y n ruditapes_s39580 -4.448 0.624 0.492 0.111 n y n ruditapes_c21466 -8.895 0.624 0.341 0.038 n y n ruditapes_c7105 -8.895 0.624 0.341 0.038 n y n ruditapes_c11947 -? 0.624 polyprotein /// 0044238 // primary metabolic process /// 0003824 // catalytic activity /// 0003676 // nucleic acid binding /// 0034960 // cellular biopolymer metabolic process 0.24 0 n y n ruditapes_c29475 -? 0.624 0.24 0 n y n ruditapes_c31685 -? 0.624 0.24 0 n y n ruditapes_s35425 -? 0.624 0.24 0 n y n ruditapes_c17473 -1.151 0.625 28.763 24.997 n n n ruditapes2_lrc1803 -1.167 0.625 23.71 20.317 n n n ruditapes2_lrc6729 1.212 0.625 ribosomal protein l21 /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 10.957 13.282 n n n ruditapes_c2309 1.218 0.625 10.445 12.72 n n n ruditapes_c8999 -1.351 0.625 14-3-3 protein /// 0040010 // positive regulation of growth rate /// 0005515 // protein binding /// 0043053 // dauer entry /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0018991 // oviposition 6.434 4.762 n n n ruditapes_c8320 -1.358 0.625 6.249 4.601 n n n ruditapes_c18301 -1.367 0.625 5.989 4.382 n n n ruditapes_c5317 -1.383 0.625 5.58 4.034 n n n ruditapes_c11142 1.761 0.625 1.112 1.958 n y n ruditapes_c8475 -1.594 0.625 sarcoglycan zeta 2.874 1.803 n y n ruditapes_c25915 -1.737 0.625 2.14 1.232 n y n ruditapes_c23848 -1.779 0.625 c7orf63 protein 1.992 1.12 n y n ruditapes_c8692 2.248 0.625 c1q and tumor necrosis factor related protein 3 0.492 1.105 n y n ruditapes_c13438 -1.828 0.625 1.843 1.008 n y n ruditapes2_lrc3123 -1.923 0.625 1.604 0.834 n y n ruditapes_c11673 4.047 0.625 0.129 0.521 n y n ruditapes_c29646 -2.594 0.625 0.889 0.343 n y n ruditapes_c18059 -2.669 0.625 short chain dehydrogenase /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0.852 0.319 n y n ruditapes_c20428 ? 0.625 0 0.239 n y n ruditapes_c24767 ? 0.625 0 0.239 n y n ruditapes_c31309 ? 0.625 0 0.239 n y n ruditapes_lrc36413 ? 0.625 kl-2 1-beta dynein heavy chain 0 0.239 n y n ruditapes_c19660 ? 0.625 0 0.238 n y n ruditapes_c27661 ? 0.625 0 0.238 n y n ruditapes_c21652 -3.494 0.625 0.607 0.174 n y n ruditapes_c11530 -3.558 0.625 isoform cra_a 0.596 0.167 n y n ruditapes_c27809 -5.93 0.625 mgc81930 protein 0.405 0.068 n y n ruditapes_c18017 -? 0.625 0.239 0 n y n ruditapes_c18803 -? 0.625 0.239 0 n y n ruditapes_c24910 -? 0.625 0.239 0 n y n ruditapes_c7296 -? 0.625 0.239 0 n y n ruditapes2_c1886 -1.093 0.626 72.851 66.628 n n n ruditapes_c7066 -1.106 0.626 56.608 51.179 n n n ruditapes_c846 -1.109 0.626 heat shock protein 90 /// 0005524 // ATP binding /// 0051082 // unfolded protein binding /// 0006457 // protein folding 53.621 48.351 n n n ruditapes2_c1462 -1.232 0.626 12.915 10.479 n n n ruditapes2_c1860 -1.252 0.626 11.154 8.907 n n n ruditapes2_c3003 1.366 0.626 4.023 5.497 n n n ruditapes2_c1999 -1.338 0.626 6.824 5.1 n n n ruditapes_c6203 1.48 0.626 2.468 3.653 n n n ruditapes_c31161 -1.54 0.626 hypothetical protein BRAFLDRAFT_80432 [Branchiostoma floridae] 3.281 2.131 n y n ruditapes_lrc14487 1.714 0.626 1.232 2.112 n y n ruditapes2_c1523 1.836 0.626 0.941 1.728 n y n ruditapes_c16489 -1.631 0.626 2.628 1.612 n y n ruditapes_c28738 -1.711 0.626 2.23 1.303 n y n ruditapes_c25809 -1.779 0.626 1.982 1.114 n y n ruditapes_c15392 -1.84 0.626 1.791 0.973 n y n ruditapes_c29808 2.788 0.626 asparagine-linked glycosylation 14 homolog /// 0044464 // cell part 0.279 0.778 n y n ruditapes_c12322 -2.093 0.626 1.311 0.626 n y n ruditapes2_lrc3763 -2.138 0.626 1.252 0.585 n y n ruditapes_c12227 -2.335 0.626 1.051 0.45 n y n ruditapes2_c4871 ? 0.626 transport protein sec61 subunit beta 0 0.238 n y n ruditapes_c13067 ? 0.626 0 0.238 n y n ruditapes_c17924 ? 0.626 hypothetical protein BRAFLDRAFT_86023 [Branchiostoma floridae] 0 0.238 n y n ruditapes_c20663 ? 0.626 jagged 1 /// 0048513 // organ development 0 0.238 n y n ruditapes_c20126 ? 0.626 hypothetical protein [Crassostrea angulata] 0 0.237 n y n ruditapes_c26317 ? 0.626 0 0.237 n y n ruditapes_c9441 ? 0.626 0 0.237 n y n ruditapes2_lrc5003 -4.003 0.626 0.531 0.133 n y n ruditapes_lrc23396 -4.448 0.626 0.489 0.11 n y n ruditapes_c21973 -4.448 0.626 0.488 0.11 n y n ruditapes_c20046 -5.559 0.626 0.42 0.075 n y n ruditapes_c8086 -5.559 0.626 protein 0.419 0.075 n y n ruditapes_c21813 -5.559 0.626 0.418 0.075 n y n ruditapes2_c2372 -6.671 0.626 0.379 0.057 n y n ruditapes_s39776 -8.895 0.626 astacin-like squid metalloprotease type iii 0.337 0.038 n y n ruditapes_c8839 -8.895 0.626 0.336 0.038 n y n ruditapes_c11846 -? 0.626 0.238 0 n y n ruditapes_c14465 -? 0.626 0.237 0 n y n ruditapes_c21348 -? 0.626 0.237 0 n y n ruditapes2_lrc5160 1.156 0.627 ribosomal protein l12 18.994 21.964 n n n ruditapes_c3012 -1.204 0.627 16.232 13.483 n n n ruditapes_c8357 1.242 0.627 8.503 10.561 n n n ruditapes_c3900 1.265 0.627 7.194 9.103 n n n ruditapes_c16537 -1.332 0.627 6.962 5.227 n n n ruditapes_c14645 -1.403 0.627 5.098 3.633 n n n ruditapes_lrc24231 -1.483 0.627 3.866 2.607 n n n ruditapes_c27297 1.67 0.627 amp-activated protein kinase gamma2 subunit /// 0005524 // ATP binding /// 0031588 // AMP-activated protein kinase complex /// 0006950 // response to stress /// 0008603 // cAMP-dependent protein kinase regulator activity /// 0016208 // AMP binding /// 0019901 // protein kinase binding /// 0046320 // regulation of fatty acid oxidation /// 0043531 // ADP binding /// 0005654 // nucleoplasm /// 0006469 // negative regulation of protein kinase activity /// 0008607 // phosphorylase kinase regulator activity /// 0005829 // cytosol /// 0004679 // AMP-activated protein kinase activity /// 0045860 // positive regulation of protein kinase activity /// 0030295 // protein kinase activator activity /// 0004862 // cAMP-dependent protein kinase inhibitor activity /// 0006110 // regulation of glycolysis /// 0007243 // protein kinase cascade 1.37 2.288 n y n ruditapes_lrc32748 1.681 0.627 cystatin c 1.328 2.234 n y n ruditapes2_c3451 -1.584 0.627 transmembrane serine 9 2.919 1.842 n y n ruditapes2_c4638 1.833 0.627 0.946 1.734 n y n ruditapes_c16353 -1.652 0.627 2.505 1.517 n y n ruditapes_c10015 2.041 0.627 0.652 1.33 n y n ruditapes_lrc33435 -1.714 0.627 translationally controlled tumor protein 2.21 1.289 n y n ruditapes_lrc36005 -1.793 0.627 1.925 1.074 n y n ruditapes_c6791 2.548 0.627 0.344 0.878 n y n ruditapes_c13119 -1.906 0.627 1.628 0.854 n y n ruditapes_c9913 -2.038 0.627 1.383 0.679 n y n ruditapes_c12147 -2.224 0.627 cxorf58 protein 1.145 0.515 n y n ruditapes_s37176 5.396 0.627 0.078 0.421 n y n ruditapes_c26350 5.396 0.627 0.078 0.42 n y n ruditapes_c31633 -2.446 0.627 0.965 0.395 n y n ruditapes_c29535 -2.78 0.627 0.791 0.285 n y n ruditapes_s36980 -2.859 0.627 0.764 0.267 n y n ruditapes_c27323 -2.965 0.627 0.727 0.245 n y n ruditapes_c13924 ? 0.627 brain protein 44-like protein 0 0.236 n y n ruditapes_c26996 ? 0.627 0 0.236 n y n ruditapes_c4313 ? 0.627 srrm2 protein 0 0.236 n y n ruditapes_lrc37069 ? 0.627 selenium-dependent glutathione peroxidase /// 0006979 // response to oxidative stress /// 0004602 // glutathione peroxidase activity 0 0.236 n y n ruditapes_c31260 -3.113 0.627 0.685 0.22 n y n ruditapes_c22649 -5.559 0.627 0.417 0.075 n y n ruditapes_c9547 -7.783 0.627 0.353 0.045 n y n ruditapes2_lrc6515 -8.895 0.627 cytochrome c oxidase subunit vib isoform 2 0.334 0.038 n y n ruditapes_c18704 -8.895 0.627 0.334 0.038 n y n ruditapes_c18979 -? 0.627 0.236 0 n y n ruditapes_c29388 -1.246 0.628 11.541 9.262 n n n ruditapes2_c1804 1.324 0.628 4.976 6.586 n n n ruditapes_c13005 -1.319 0.628 x-box binding protein 1 "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0005634 // nucleus /// 0030968 // endoplasmic reticulum unfolded protein response" 7.406 5.617 n n n ruditapes_c17993 1.393 0.628 uncharacterized protein c20orf152 homolog 3.49 4.862 n n n ruditapes_c19711 1.538 0.628 1.991 3.063 n y n ruditapes_c23111 -1.491 0.628 3.737 2.506 n n n ruditapes_c20140 -1.51 0.628 3.531 2.338 n y n ruditapes_c24520 -1.609 0.628 2.734 1.699 n y n ruditapes_c35049 -2.028 0.628 fasciclin domain-containing protein 1.392 0.687 n y n ruditapes_c9073 -2.224 0.628 1.139 0.512 n y n ruditapes2_c2997 -2.224 0.628 1.138 0.512 n y n ruditapes_c10746 -2.965 0.628 0.722 0.243 n y n ruditapes_s33552 -2.965 0.628 0.722 0.243 n y n ruditapes2_lrc3311 ? 0.628 transgelin 2 0 0.235 n y n ruditapes_c12611 ? 0.628 0 0.235 n y n ruditapes_c16912 ? 0.628 c-type lectin domain family member a 0 0.235 n y n ruditapes_c21020 ? 0.628 0 0.235 n y n ruditapes_c24102 ? 0.628 0 0.235 n y n ruditapes_lrc22939 ? 0.628 0 0.235 n y n ruditapes_lrc38023 ? 0.628 chymotrypsin a ctra-1 /// 0016787 // hydrolase activity 0 0.235 n y n ruditapes_lrc34411 ? 0.628 0 0.234 n y n ruditapes_s32612 -3.113 0.628 0.678 0.218 n y n ruditapes_c11887 -3.892 0.628 0.539 0.139 n y n ruditapes_c22306 -3.892 0.628 proprotein convertase subtilisin kexin type 1 /// 0003824 // catalytic activity 0.538 0.138 n y n ruditapes_c627 -4.077 0.628 neurogenic locus protein 0.517 0.127 n y n ruditapes_c999 -5.189 0.628 0.433 0.083 n y n ruditapes_c18382 -5.559 0.628 serine protease 1-like protein 1 precursor (complement factor d-like protein) /// 0016787 // hydrolase activity 0.415 0.075 n y n ruditapes2_c290 -? 0.628 0.235 0 n y n ruditapes2_lrc5234 -? 0.628 0.235 0 n y n ruditapes_c12212 -? 0.628 0.235 0 n y n ruditapes_c19714 -? 0.628 0.235 0 n y n ruditapes_lrc8352 -? 0.628 0.235 0 n y n ruditapes_lrc34646 -? 0.628 0.234 0 n y n ruditapes_c4744 1.216 0.629 10.396 12.64 n n n ruditapes_c20526 -1.305 0.629 7.941 6.087 n n n ruditapes_c1466 1.368 0.629 nadh dehydrogenase 1 alpha subcomplex subunit mitochondrial precursor 3.926 5.37 n n n ruditapes_c30544 1.394 0.629 3.455 4.816 n n n ruditapes_c2655 -1.382 0.629 5.5 3.98 n n n ruditapes_c13760 -1.403 0.629 5.046 3.596 n n n ruditapes_c7662 1.566 0.629 1.82 2.851 n y n ruditapes_c15804 -1.494 0.629 3.681 2.464 n n n ruditapes_c24361 1.633 0.629 1.49 2.433 n y n ruditapes_c28852 1.633 0.629 1.49 2.433 n y n ruditapes_c9344 -1.531 0.629 3.301 2.156 n y n ruditapes_lrc38069 -1.577 0.629 2.938 1.863 n y n ruditapes_c21708 2.069 0.629 0.616 1.273 n y n ruditapes_c15140 2.323 0.629 0.437 1.016 n y n ruditapes2_c3080 -1.828 0.629 1.801 0.985 n y n ruditapes_lrc18112 -1.853 0.629 1.731 0.934 n y n ruditapes_c27338 3.148 0.629 0.207 0.653 n y n ruditapes_c30187 6.296 0.629 0.06 0.38 n y n ruditapes_c14910 -2.541 0.629 0.897 0.353 n y n ruditapes_c30951 -2.594 0.629 0.869 0.335 n y n ruditapes_c13030 ? 0.629 0 0.234 n y n ruditapes_c21147 ? 0.629 0 0.234 n y n ruditapes_c23538 ? 0.629 0 0.234 n y n ruditapes_c18468 ? 0.629 0 0.233 n y n ruditapes_c16790 -3.892 0.629 0.536 0.138 n y n ruditapes_c20562 -3.892 0.629 0.535 0.137 n y n ruditapes_lrc23040 -4.448 0.629 0.478 0.107 n y n ruditapes_c18128 -8.895 0.629 0.33 0.037 n y n ruditapes_c8276 -8.895 0.629 0.33 0.037 n y n ruditapes2_c3125 -11.119 0.629 PREDICTED: similar to GA21374-PA [Strongylocentrotus purpuratus] 0.309 0.028 n y n ruditapes_c14915 -? 0.629 0.234 0 n y n ruditapes_c17746 -? 0.629 0.234 0 n y n ruditapes_c24557 -? 0.629 0.234 0 n y n ruditapes_c25160 -? 0.629 0.234 0 n y n ruditapes_lrc18877 -? 0.629 0.234 0 n y n ruditapes_c12983 -? 0.629 0.233 0 n y n ruditapes_c17315 -? 0.629 0.233 0 n y n ruditapes_s37557 -? 0.629 0.233 0 n y n ruditapes2_lrc5856 1.09 0.63 51.404 56.028 n n n ruditapes_c10848 1.203 0.63 11.518 13.859 n n n ruditapes_c10041 -1.325 0.63 7.09 5.349 n n n ruditapes_c12143 -1.393 0.63 5.237 3.761 n n n ruditapes_c13481 1.489 0.63 protein phosphatase 2 (formerly 2a) catalytic alpha isoform /// 0004722 // protein serine/threonine phosphatase activity /// 0008380 // RNA splicing /// 0043066 // negative regulation of apoptosis /// 0007498 // mesoderm development /// 0010033 // response to organic substance /// 0045449 // regulation of transcription /// 0005739 // mitochondrion /// 0030145 // manganese ion binding /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0015630 // microtubule cytoskeleton /// 0005634 // nucleus /// 0051726 // regulation of cell cycle /// 0005886 // plasma membrane /// 0006470 // protein amino acid dephosphorylation /// 0046982 // protein heterodimerization activity /// 0005625 // soluble fraction /// 0045595 // regulation of cell differentiation /// 0000159 // protein phosphatase type 2A complex /// 0006275 // regulation of DNA replication /// 0006917 // induction of apoptosis /// 0019932 // second-messenger-mediated signaling /// 0005829 // cytosol /// 0008022 // protein C-terminus binding /// 0030155 // regulation of cell adhesion /// 0000188 // inactivation of MAPK activity /// 0005506 // iron ion binding /// 0042542 // response to hydrogen peroxide /// 0006672 // ceramide metabolic process /// 0042518 // negative regulation of tyrosine phosphorylation of Stat3 protein /// 0030111 // regulation of Wnt receptor signaling pathway /// 0030308 // negative regulation of cell growth /// 0046677 // response to antibiotic 2.346 3.493 n n n ruditapes_c24068 1.686 0.63 1.289 2.174 n y n ruditapes_c30456 1.799 0.63 0.996 1.792 n y n ruditapes_c18662 2.12 0.63 0.566 1.201 n y n ruditapes_c16476 2.248 0.63 alkaline phosphatase /// 0035264 // multicellular organism growth /// 0022008 // neurogenesis /// 0006793 // phosphorus metabolic process /// 0009897 // external side of plasma membrane /// 0035121 // tail morphogenesis /// 0005515 // protein binding /// 0004035 // alkaline phosphatase activity /// 0008270 // zinc ion binding /// 0000287 // magnesium ion binding /// 0021915 // neural tube development 0.475 1.069 n y n ruditapes_c26469 -1.807 0.63 1.85 1.024 n y n ruditapes_c7217 -1.819 0.63 subfamily member 19 /// 0031072 // heat shock protein binding /// 0005739 // mitochondrion /// 0007601 // visual perception /// 0016021 // integral to membrane /// 0048806 // genitalia development /// 0006457 // protein folding 1.81 0.995 n y n ruditapes2_c6814 2.586 0.63 caveolin 3 /// 0065009 // regulation of molecular function /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005198 // structural molecule activity /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0006873 // cellular ion homeostasis /// 0060035 // notochord cell development /// 0005515 // protein binding /// 0043234 // protein complex /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0045214 // sarcomere organization /// 0008016 // regulation of heart contraction /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0045121 // membrane raft 0.327 0.846 n y n ruditapes2_c3625 7.195 0.63 sarcoplasmic calcium-binding protein 0.049 0.356 n y n ruditapes_c19316 ? 0.63 zinc finger protein 0 0.233 n y n ruditapes_s39344 ? 0.63 ganglioside gm2 activator precursor 0 0.233 n y n ruditapes2_c2024 ? 0.63 0 0.232 n y n ruditapes_c11542 ? 0.63 0 0.232 n y n ruditapes_c12724 ? 0.63 0 0.232 n y n ruditapes_c23350 ? 0.63 0 0.232 n y n ruditapes_c22684 -3.336 0.63 0.622 0.186 n y n ruditapes_c7471 -4.003 0.63 0.519 0.13 n y n ruditapes_c22814 -5.559 0.63 0.409 0.074 n y n ruditapes_c24634 -5.559 0.63 0.409 0.074 n y n ruditapes_c3336 -5.559 0.63 macrophage migration inhibitory factor 0.409 0.074 n y n ruditapes_c17945 -5.93 0.63 type alpha 2 0.395 0.067 n y n ruditapes_c20306 -8.895 0.63 0.328 0.037 n y n ruditapes_c24219 -8.895 0.63 ptd016 protein 0.328 0.037 n y n ruditapes_c28512 -11.119 0.63 0.307 0.028 n y n ruditapes_c16139 -? 0.63 0.232 0 n y n ruditapes_c38629 -? 0.63 thioredoxin domain containing 9 /// 0005515 // protein binding 0.231 0 n y n ruditapes_c13681 -1.147 0.631 29.316 25.57 n n n ruditapes2_c332 -1.242 0.631 11.7 9.419 n n n ruditapes_c1135 1.313 0.631 brix domain containing 5 /// 0030529 // ribonucleoprotein complex /// 0005730 // nucleolus /// 0019843 // rRNA binding /// 0006364 // rRNA processing 5.203 6.83 n n n ruditapes_c259 -1.317 0.631 7.379 5.603 n n n ruditapes_lrc8413 1.553 0.631 1.867 2.9 n y n ruditapes_c31555 1.76 0.631 1.077 1.895 n y n ruditapes2_lrc3778 1.919 0.631 0.785 1.506 n y n ruditapes_c20336 1.991 0.631 0.688 1.371 n y n ruditapes_c1198 -1.689 0.631 2.258 1.337 n y n ruditapes2_c1106 -1.752 0.631 2.018 1.152 n y n ruditapes_c28160 -1.779 0.631 1.924 1.081 n y n ruditapes_c31136 2.313 0.631 0.437 1.011 n y n ruditapes_c28547 2.377 0.631 neuron-specific protein 0.404 0.961 n y n ruditapes_c30919 -1.99 0.631 pih1 domain containing 1 1.423 0.715 n y n ruditapes_c19877 3.597 0.631 0.156 0.561 n y n ruditapes2_c401 -2.224 0.631 molting fluid carboxypeptidase a /// 0008233 // peptidase activity 1.12 0.504 n y n ruditapes_c26258 5.846 0.631 0.067 0.391 n y n ruditapes_c279 -2.83 0.631 0.754 0.266 n y n ruditapes_c1373 -2.965 0.631 protein /// 0005216 // ion channel activity /// 0016020 // membrane 0.71 0.24 n y n ruditapes_c31581 -2.965 0.631 hypothetical protein Clim_1858 [Chlorobium limicola DSM 245] 0.71 0.24 n y n ruditapes_c27830 ? 0.631 0 0.231 n y n ruditapes_c19418 ? 0.631 xylulokinase homolog 0 0.23 n y n ruditapes_c30157 -4.003 0.631 0.517 0.129 n y n ruditapes_lrc12443 -4.448 0.631 0.475 0.107 n y n ruditapes_c17768 -11.119 0.631 0.305 0.027 n y n ruditapes_c9451 -11.119 0.631 0.305 0.027 n y n ruditapes_c23565 -? 0.631 0.231 0 n y n ruditapes_c15169 -? 0.631 0.23 0 n y n ruditapes_c31110 1.176 0.632 14.809 17.416 n n n ruditapes_c4806 1.24 0.632 8.399 10.411 n n n ruditapes2_c1432 -1.3 0.632 8.032 6.18 n n n ruditapes_c10954 -1.304 0.632 7.85 6.019 n n n ruditapes_c25976 -1.374 0.632 5.606 4.081 n n n ruditapes_c12660 -1.382 0.632 nhp2 non-histone chromosome protein 2-like 1 ( cerevisiae) "/// 0007338 // single fertilization /// 0005634 // nucleus /// 0000398 // nuclear mRNA splicing, via spliceosome" 5.406 3.913 n n n ruditapes_c23015 -1.39 0.632 5.23 3.763 n n n ruditapes_c31631 -1.425 0.632 4.571 3.209 n n n ruditapes_lrc9958 -1.476 0.632 3.83 2.595 n n n ruditapes_c29200 -1.629 0.632 pbx homeobox protein "/// 0004801 // transaldolase activity /// 0003700 // transcription factor activity /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0043565 // sequence-specific DNA binding /// 0000060 // protein import into nucleus, translocation /// 0007422 // peripheral nervous system development /// 0005667 // transcription factor complex /// 0001654 // eye development" 2.55 1.566 n y n ruditapes_c5081 2.173 0.632 0.519 1.129 n y n ruditapes_c26538 2.248 0.632 0.471 1.059 n y n ruditapes_c17286 -1.882 0.632 1.632 0.867 n y n ruditapes_lrc9554 3.597 0.632 c16orf14 homolog 0.155 0.559 n y n ruditapes2_c1639 3.597 0.632 calmodulin-like protein /// 0005488 // binding 0.155 0.556 n y n ruditapes_c17780 -2.224 0.632 1.117 0.502 n y n ruditapes_c21366 -2.409 0.632 0.961 0.399 n y n ruditapes_c26629 -2.78 0.632 0.772 0.278 n y n ruditapes_c14434 ? 0.632 0 0.23 n y n ruditapes_c31150 ? 0.632 0 0.23 n y n ruditapes_c21281 ? 0.632 ugp /// 0016740 // transferase activity 0 0.229 n y n ruditapes_c8687 ? 0.632 0 0.229 n y n ruditapes_c17627 -3.892 0.632 0.526 0.135 n y n ruditapes_c19187 -5.559 0.632 hypothetical protein BRAFLDRAFT_117283 [Branchiostoma floridae] 0.405 0.073 n y n ruditapes_c24425 -5.559 0.632 0.405 0.073 n y n ruditapes_s35120 -5.559 0.632 0.405 0.073 n y n ruditapes_c18049 -8.895 0.632 0.325 0.037 n y n ruditapes_c13282 -8.895 0.632 0.324 0.036 n y n ruditapes_c29466 -11.119 0.632 0.303 0.027 n y n ruditapes_c18224 -? 0.632 0.23 0 n y n ruditapes_c18109 -? 0.632 0.229 0 n y n ruditapes_c6191 -? 0.632 tp53 regulated inhibitor of apoptosis 1 /// 0006915 // apoptosis /// 0005737 // cytoplasm /// 0050794 // regulation of cellular process 0.229 0 n y n ruditapes_c11041 1.132 0.633 25.027 28.332 n n n ruditapes_c2481 1.207 0.633 10.957 13.222 n n n ruditapes_c12195 -1.385 0.633 5.295 3.824 n n n ruditapes_c21296 -1.432 0.633 4.429 3.093 n n n ruditapes_c30695 -1.497 0.633 3.57 2.385 n n n ruditapes2_c2029 -1.498 0.633 3.547 2.368 n n n ruditapes_c21031 -1.549 0.633 3.078 1.987 n y n ruditapes_c13048 -1.701 0.633 2.191 1.289 n y n ruditapes_c9664 2.428 0.633 0.378 0.918 n y n ruditapes_c6185 -2.085 0.633 1.264 0.606 n y n ruditapes2_lrc3663 -2.1 0.633 member of ras oncogene family-like 4 /// 0000166 // nucleotide binding 1.244 0.592 n y n ruditapes_c13499 -2.224 0.633 1.106 0.497 n y n ruditapes_lrc36551 -2.78 0.633 cytochrome c oxidase subunit va 0.764 0.275 n y n ruditapes_c18717 -2.859 0.633 0.738 0.258 n y n ruditapes2_lrc4181 ? 0.633 0 0.228 n y n ruditapes_c13614 ? 0.633 solute carrier family member 4 0 0.228 n y n ruditapes_c16094 ? 0.633 0 0.228 n y n ruditapes_c24074 ? 0.633 0 0.228 n y n ruditapes_c442 ? 0.633 cyclase family protein 0 0.228 n y n ruditapes_c34221 -3.558 0.633 chondroitin sulfate proteoglycan 3 /// 0005488 // binding /// 0009987 // cellular process 0.571 0.161 n y n ruditapes2_lrc7345 -3.892 0.633 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.524 0.135 n y n ruditapes_c30666 -5.189 0.633 0.42 0.081 n y n ruditapes_c12728 -5.559 0.633 0.402 0.072 n y n ruditapes_c21979 -5.559 0.633 0.402 0.072 n y n ruditapes2_c6609 -8.895 0.633 0.322 0.036 n y n ruditapes_c23293 -8.895 0.633 0.322 0.036 n y n ruditapes2_c1423 -? 0.633 0.228 0 n y n ruditapes_c17797 -? 0.633 0.228 0 n y n ruditapes_lrc17003 -? 0.633 0.228 0 n y n ruditapes_lrc38689 -? 0.633 0.228 0 n y n ruditapes_c17360 -? 0.633 0.227 0 n y n ruditapes_lrc38535 -1.201 0.634 ribosomal protein s3a /// 0005840 // ribosome /// 0006412 // translation /// 0032502 // developmental process /// 0003735 // structural constituent of ribosome 16.001 13.325 n n n ruditapes_c13163 1.258 0.634 7.232 9.099 n n n ruditapes_c7120 -1.394 0.634 beta-ig-h3 fasciclin 5.081 3.645 n n n ruditapes_c20272 1.478 0.634 2.381 3.518 n n n ruditapes_c3192 -1.418 0.634 4.618 3.256 n n n ruditapes_c28441 -1.43 0.634 4.425 3.095 n n n ruditapes_c9265 1.533 0.634 1.958 3.001 n y n ruditapes_c14480 -1.47 0.634 3.865 2.629 n n n ruditapes2_c180 -1.477 0.634 prefoldin subunit 4 /// 0005515 // protein binding /// 0006457 // protein folding 3.786 2.564 n n n ruditapes2_c1949 -1.572 0.634 glutaredoxin 2 2.89 1.839 n y n ruditapes_c25782 -1.679 0.634 2.263 1.348 n y n ruditapes_c21492 2.056 0.634 x-prolyl aminopeptidase (aminopeptidase p) "/// 0005739 // mitochondrion /// 0046872 // metal ion binding /// 0005634 // nucleus /// 0070011 // peptidase activity, acting on L-amino acid peptides" 0.61 1.254 n y n ruditapes_c10077 2.085 0.634 0.583 1.217 n y n ruditapes_c30851 -1.751 0.634 trove domain member 2 1.987 1.135 n y n ruditapes_c24445 -1.827 0.634 1.747 0.956 n y n ruditapes_c31506 -1.853 0.634 1.678 0.906 n y n ruditapes_c31240 2.518 0.634 protein 0.342 0.862 n y n ruditapes2_lrc4880 -1.946 0.634 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 1.483 0.762 n y n ruditapes_c5409 -2.001 0.634 1.386 0.693 n y n ruditapes_c11593 -2.012 0.634 1.37 0.681 n y n ruditapes_c6363 -2.053 0.634 1.307 0.637 n y n ruditapes_lrc33509 -2.594 0.634 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.84 0.324 n y n ruditapes2_lrc5953 -2.628 0.634 atp binding 0.824 0.314 n y n ruditapes_lrc15132 -2.669 0.634 0.806 0.302 n y n ruditapes_c29039 ? 0.634 0 0.227 n y n ruditapes_c14584 ? 0.634 0 0.226 n y n ruditapes_c19578 ? 0.634 valosin containing protein p47 complex interacting protein 1 /// 0016320 // endoplasmic reticulum membrane fusion /// 0005515 // protein binding /// 0016567 // protein ubiquitination /// 0005737 // cytoplasm /// 0008233 // peptidase activity /// 0007067 // mitosis /// 0007030 // Golgi organization 0 0.226 n y n ruditapes_c20152 ? 0.634 0 0.226 n y n ruditapes_c24852 ? 0.634 0 0.226 n y n ruditapes_c1724 -4.003 0.634 0.506 0.126 n y n ruditapes2_c2122 -4.448 0.634 0.465 0.105 n y n ruditapes_c10827 -5.559 0.634 0.399 0.072 n y n ruditapes_c23506 -6.671 0.634 0.363 0.054 n y n ruditapes_c11311 -? 0.634 0.227 0 n y n ruditapes_c22692 -? 0.634 0.227 0 n y n ruditapes_c12127 -? 0.634 0.226 0 n y n ruditapes_c30504 -? 0.634 0.226 0 n y n ruditapes_lrc23037 -1.209 0.635 14.755 12.2 n n n ruditapes_c8480 1.28 0.635 6.187 7.921 n n n ruditapes_c7775 -1.277 0.635 26s proteasome non-atpase regulatory subunit 14 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle /// 0004175 // endopeptidase activity 9.026 7.069 n n n ruditapes_lrc25969 -1.342 0.635 6.348 4.732 n n n ruditapes2_c1234 1.425 0.635 2.912 4.151 n n n ruditapes_c24490 1.596 0.635 1.605 2.562 n y n ruditapes_c11770 -1.491 0.635 3.597 2.413 n n n ruditapes_c16808 -1.516 0.635 3.325 2.193 n y n ruditapes2_c1000 -1.527 0.635 3.234 2.117 n y n ruditapes_lrc15375 -1.534 0.635 3.169 2.067 n y n ruditapes_c7506 -1.57 0.635 heat shock 70kda protein 12a 2.876 1.832 n y n ruditapes_c13248 -1.573 0.635 2.863 1.82 n y n ruditapes2_c1833 -1.627 0.635 dsba oxidoreductase 2.512 1.544 n y n ruditapes_c22580 -1.631 0.635 2.496 1.531 n y n ruditapes2_c4051 -1.69 0.635 inhibitor of apoptosis isoform a /// 0007166 // cell surface receptor linked signal transduction /// 0046872 // metal ion binding /// 0050829 // defense response to Gram-negative bacterium /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0019730 // antimicrobial humoral response /// 0005829 // cytosol /// 0007423 // sensory organ development 2.208 1.306 n y n ruditapes_c26584 2.136 0.635 0.54 1.154 n y n ruditapes_c4018 -1.844 0.635 adp-ribosylation factor 2 /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0006471 // protein amino acid ADP-ribosylation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0007269 // neurotransmitter secretion /// 0016197 // endosome transport /// 0007155 // cell adhesion /// 0048488 // synaptic vesicle endocytosis /// 0008360 // regulation of cell shape 1.693 0.918 n y n ruditapes_c13274 2.473 0.635 0.356 0.88 n y n ruditapes2_lrc5162 -1.906 0.635 1.555 0.816 n y n ruditapes_lrc33687 -1.977 0.635 developmentally-regulated vdg3 1.417 0.717 n y n ruditapes_c9394 -2.012 0.635 1.357 0.674 n y n ruditapes_c26657 -2.224 0.635 member ras oncogene family /// 0006810 // transport /// 0016020 // membrane /// 0003924 // GTPase activity /// 0000166 // nucleotide binding /// 0005764 // lysosome /// 0005770 // late endosome 1.096 0.493 n y n ruditapes_c18813 -2.446 0.635 0.923 0.377 n y n ruditapes_c11597 -2.891 0.635 0.716 0.248 n y n ruditapes_c24736 ? 0.635 0 0.226 n y n ruditapes_c26181 ? 0.635 hypothetical protein BRAFLDRAFT_130336 [Branchiostoma floridae] 0 0.226 n y n ruditapes_c28683 ? 0.635 0 0.226 n y n ruditapes_c27906 ? 0.635 sulfotransferase k1 0 0.225 n y n ruditapes_c27944 ? 0.635 "PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]" 0 0.225 n y n ruditapes_c30562 ? 0.635 0 0.225 n y n ruditapes_c19774 -4.448 0.635 0.463 0.104 n y n ruditapes_c8831 -4.448 0.635 0.461 0.104 n y n ruditapes_c21520 -5.559 0.635 0.397 0.071 n y n ruditapes_c27087 -5.559 0.635 0.396 0.071 n y n ruditapes_c24248 -8.895 0.635 0.319 0.036 n y n ruditapes_c10220 -8.895 0.635 0.318 0.036 n y n ruditapes_c14252 -8.895 0.635 0.318 0.036 n y n ruditapes_c9992 -15.566 0.635 0.274 0.018 n y n ruditapes_c11347 -? 0.635 0.226 0 n y n ruditapes_c14229 -? 0.635 0.226 0 n y n ruditapes_c16286 -? 0.635 0.226 0 n y n ruditapes_c18919 -? 0.635 0.226 0 n y n ruditapes_c7793 -? 0.635 0.226 0 n y n ruditapes_c10507 -? 0.635 0.225 0 n y n ruditapes_c4955 -1.177 0.636 19.967 16.966 n n n ruditapes2_lrc4285 -1.231 0.636 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 12.275 9.968 n n n ruditapes_c16267 -1.256 0.636 10.289 8.19 n n n ruditapes_c23913 1.325 0.636 4.691 6.217 n n n ruditapes_c26324 1.349 0.636 4.126 5.567 n n n ruditapes_c1914 1.363 0.636 nidogen 2 3.864 5.266 n n n ruditapes2_c3463 -1.323 0.636 adhesion lipoprotein 6.932 5.238 n n n ruditapes_c28730 -1.326 0.636 6.833 5.154 n n n ruditapes_c2908 -1.33 0.636 6.688 5.03 n n n ruditapes_c27308 1.409 0.636 3.104 4.373 n n n ruditapes_c16759 -1.442 0.636 4.184 2.9 n n n ruditapes_lrc33428 -1.469 0.636 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 3.814 2.596 n n n ruditapes_c9277 1.67 0.636 1.295 2.163 n y n ruditapes_c21063 -1.54 0.636 3.11 2.02 n y n ruditapes_c30376 -1.549 0.636 3.022 1.951 n y n ruditapes_c13019 1.822 0.636 sphingomyelin acid-like 3b 0.918 1.672 n y n ruditapes_c19864 2.173 0.636 0.509 1.106 n y n ruditapes_c19788 2.173 0.636 0.507 1.102 n y n ruditapes2_c3873 -1.791 0.636 ring-box 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0006281 // DNA repair /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0019005 // SCF ubiquitin ligase complex /// 0008270 // zinc ion binding /// 0005680 // anaphase-promoting complex /// 0004842 // ubiquitin-protein ligase activity /// 0008190 // eukaryotic initiation factor 4E binding /// 0030891 // VCB complex 1.826 1.019 n y n ruditapes_lrc39351 -1.793 0.636 ribosomal protein s18 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0022627 // cytosolic small ribosomal subunit 1.823 1.016 n y n ruditapes_c20565 2.586 0.636 sulfotransferase family cytosolic 2b member 1 0.315 0.814 n y n ruditapes_lrc38751 2.923 0.636 0.235 0.686 n y n ruditapes_c31046 6.745 0.636 0.052 0.354 n y n ruditapes_c19719 -2.965 0.636 hypothetical protein BRAFLDRAFT_84667 [Branchiostoma floridae] 0.691 0.233 n y n ruditapes_c24595 ? 0.636 0 0.224 n y n ruditapes_c5406 ? 0.636 17-beta-hydroxysteroid dehydrogenase 14 /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0 0.224 n y n ruditapes_lrc36267 ? 0.636 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0048471 // perinuclear region of cytoplasm /// 0043066 // negative regulation of apoptosis /// 0030819 // positive regulation of cAMP biosynthetic process /// 0030027 // lamellipodium /// 0005739 // mitochondrion /// 0045618 // positive regulation of keratinocyte differentiation /// 0005515 // protein binding /// 0050679 // positive regulation of epithelial cell proliferation /// 0006183 // GTP biosynthetic process /// 0005882 // intermediate filament /// 0043581 // mycelium development /// 0001726 // ruffle /// 0006241 // CTP biosynthetic process /// 0002762 // negative regulation of myeloid leukocyte differentiation /// 0045682 // regulation of epidermis development /// 0004550 // nucleoside diphosphate kinase activity /// 0006165 // nucleoside diphosphate phosphorylation /// 0006228 // UTP biosynthetic process 0 0.224 n y n ruditapes_c11522 -3.892 0.636 0.513 0.132 n y n ruditapes_c18978 -4.448 0.636 0.458 0.103 n y n ruditapes_c19056 -5.559 0.636 0.395 0.071 n y n ruditapes_c22693 -5.559 0.636 0.395 0.071 n y n ruditapes2_c53 -6.671 0.636 protein 1 0.358 0.054 n y n ruditapes_c26123 -? 0.636 0.223 0 n y n ruditapes_c19891 -1.199 0.637 16.002 13.346 n n n ruditapes_c4004 1.24 0.637 8.171 10.129 n n n ruditapes_c15103 -1.266 0.637 9.55 7.541 n n n ruditapes_lrc8696 1.624 0.637 1.463 2.375 n y n ruditapes_c25876 -1.54 0.637 mitotic control protein dis3 /// 0004540 // ribonuclease activity 3.093 2.009 n y n ruditapes2_lrc4103 -1.593 0.637 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 2.685 1.686 n y n ruditapes_c26614 -1.678 0.637 chromosome 20 open reading frame 20 2.228 1.328 n y n ruditapes2_c549 -1.752 0.637 Hypothetical protein CBG11138 [Caenorhabditis briggsae AF16] 1.94 1.107 n y n ruditapes_c23778 -1.882 0.637 1.583 0.841 n y n ruditapes_c8734 2.698 0.637 0.283 0.764 n y n ruditapes_s34465 3.148 0.637 0.199 0.625 n y n ruditapes_c22416 3.298 0.637 0.179 0.592 n y n ruditapes_lrc33865 -2.224 0.637 1.081 0.486 n y n ruditapes_c8951 -2.383 0.637 hypothetical protein BRAFLDRAFT_121165 [Branchiostoma floridae] 0.952 0.4 n y n ruditapes_c13152 5.396 0.637 0.073 0.395 n y n ruditapes_c26593 -2.426 0.637 0.922 0.38 n y n ruditapes_c1267 -2.965 0.637 cathepsin l /// 0016787 // hydrolase activity 0.686 0.231 n y n ruditapes_c11580 ? 0.637 0 0.223 n y n ruditapes_c7147 ? 0.637 baculoviral iap repeat-containing 3 /// 0007166 // cell surface receptor linked signal transduction /// 0005634 // nucleus /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0005737 // cytoplasm /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity 0 0.223 n y n ruditapes_c9017 ? 0.637 0 0.223 n y n ruditapes2_lrc6330 ? 0.637 protein 0 0.222 n y n ruditapes_c34134 -5.559 0.637 0.394 0.071 n y n ruditapes_c7873 -5.559 0.637 0.392 0.071 n y n ruditapes_lrc9247 -8.895 0.637 0.316 0.036 n y n ruditapes_c9189 -11.119 0.637 0.294 0.026 n y n ruditapes_c11666 -? 0.637 0.223 0 n y n ruditapes_c28712 -? 0.637 0.223 0 n y n ruditapes_c9398 -? 0.637 0.223 0 n y n ruditapes_c26796 -? 0.637 0.222 0 n y n ruditapes_c5910 1.179 0.638 calmodulin /// 0048856 // anatomical structure development /// 0065009 // regulation of molecular function /// 0006996 // organelle organization /// 0044444 // cytoplasmic part /// 0046872 // metal ion binding /// 0048518 // positive regulation of biological process /// 0016020 // membrane /// 0043005 // neuron projection /// 0005819 // spindle /// 0044456 // synapse part /// 0004674 // protein serine/threonine kinase activity /// 0050793 // regulation of developmental process /// 0043169 // cation binding /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0008092 // cytoskeletal protein binding /// 0009968 // negative regulation of signal transduction /// 0051049 // regulation of transport /// 0007611 // learning or memory /// 0048869 // cellular developmental process /// 0007619 // courtship behavior /// 0009790 // embryonic development /// 0016059 // deactivation of rhodopsin mediated signaling 13.809 16.288 n n n ruditapes2_c3087 -1.258 0.638 9.975 7.927 n n n ruditapes_c28825 -1.263 0.638 9.694 7.677 n n n ruditapes_c26387 1.314 0.638 4.936 6.488 n n n ruditapes_lrc37217 1.377 0.638 3.561 4.903 n n n ruditapes_c9777 1.413 0.638 tenascin n /// 0005488 // binding /// 0009987 // cellular process 3.016 4.263 n n n ruditapes_c19427 -1.425 0.638 4.388 3.078 n n n ruditapes_c20070 -1.453 0.638 3.99 2.746 n n n ruditapes2_c4631 -1.627 0.638 hypothetical protein BRAFLDRAFT_277105 [Branchiostoma floridae] 2.474 1.521 n y n ruditapes_c7124 -1.65 0.638 2.346 1.422 n y n ruditapes_c8313 -1.701 0.638 2.122 1.248 n y n ruditapes_c10880 2.12 0.638 0.542 1.15 n y n ruditapes_c8765 -1.812 0.638 1.75 0.966 n y n ruditapes_c10692 -2.001 0.638 1.348 0.674 n y n ruditapes2_c2666 -2.08 0.638 1.233 0.593 n y n ruditapes_c17190 -2.085 0.638 1.232 0.591 n y n ruditapes_lrc35421 3.597 0.638 kazal-like serine protease inhibitor epi10 0.149 0.537 n y n ruditapes_c16161 -2.224 0.638 1.073 0.483 n y n ruditapes_c30442 4.497 0.638 0.099 0.446 n y n ruditapes_c21717 4.947 0.638 ubiquitin conjugating /// 0003824 // catalytic activity /// 0019538 // protein metabolic process 0.084 0.415 n y n ruditapes2_c7336 5.846 0.638 enhancer of rudimentary homolog /// 0030528 // transcription regulator activity /// 0007049 // cell cycle /// 0006207 // 'de novo' pyrimidine base biosynthetic process 0.064 0.375 n y n ruditapes_c14944 -2.891 0.638 0.705 0.244 n y n ruditapes_c6149 -2.965 0.638 0.68 0.229 n y n ruditapes_c20444 ? 0.638 c-type lectin 0 0.222 n y n ruditapes_c20448 ? 0.638 0 0.222 n y n ruditapes2_c6831 ? 0.638 0 0.221 n y n ruditapes2_c790 ? 0.638 0 0.221 n y n ruditapes_c22473 ? 0.638 protein 0 0.221 n y n ruditapes_c24246 -3.336 0.638 0.593 0.178 n y n ruditapes_c23522 -4.448 0.638 0.454 0.102 n y n ruditapes_c6051 -4.448 0.638 0.453 0.102 n y n ruditapes2_c2824 -6.671 0.638 egf-like partial 0.355 0.053 n y n ruditapes_c26459 -8.895 0.638 0.314 0.035 n y n ruditapes_c29374 -? 0.638 0.221 0 n y n ruditapes_c28497 1.249 0.639 myelin expression factor 2 /// 0003676 // nucleic acid binding 7.524 9.398 n n n ruditapes_c11617 -1.342 0.639 6.214 4.632 n n n ruditapes_c23706 1.469 0.639 2.392 3.514 n n n ruditapes2_lrc4483 1.478 0.639 nadh dehydrogenase 1 beta subcomplex 3 /// 0005739 // mitochondrion /// 0016020 // membrane 2.311 3.415 n n n ruditapes_c29618 -1.417 0.639 4.492 3.169 n n n ruditapes2_c714 -1.441 0.639 4.131 2.868 n n n ruditapes_c24746 -1.606 0.639 angiogenic factor vg5q /// 0048471 // perinuclear region of cytoplasm /// 0001938 // positive regulation of endothelial cell proliferation /// 0005576 // extracellular region /// 0043499 // eukaryotic cell surface binding /// 0006396 // RNA processing /// 0001570 // vasculogenesis /// 0005515 // protein binding /// 0045766 // positive regulation of angiogenesis /// 0007155 // cell adhesion 2.579 1.606 n y n ruditapes_lrc17956 1.84 0.639 0.87 1.6 n y n ruditapes_c11904 1.868 0.639 0.823 1.537 n y n ruditapes2_c247 -1.631 0.639 2.435 1.493 n y n ruditapes2_lrc5081 1.903 0.639 serum amyloid a protein 0.767 1.459 n y n ruditapes_c12477 2.08 0.639 0.571 1.188 n y n ruditapes_c17036 -1.769 0.639 beta -glucanase 1.864 1.054 n y n ruditapes_c9818 2.788 0.639 0.258 0.72 n y n ruditapes_c8708 -1.994 0.639 cytochrome p450 family 4 1.351 0.678 n y n ruditapes2_c3729 -2.224 0.639 copper-zinc superoxide dismutase /// 0055114 // oxidation reduction /// 0005507 // copper ion binding /// 0004784 // superoxide dismutase activity /// 0042493 // response to drug /// 0006878 // cellular copper ion homeostasis /// 0006801 // superoxide metabolic process /// 0005758 // mitochondrial intermembrane space /// 0009409 // response to cold /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0016209 // antioxidant activity /// 0006882 // cellular zinc ion homeostasis 1.07 0.481 n y n ruditapes_s39225 -2.224 0.639 1.068 0.48 n y n ruditapes_c13216 -2.446 0.639 0.901 0.368 n y n ruditapes_c5833 -2.669 0.639 0.783 0.293 n y n ruditapes_c20044 -2.965 0.639 0.676 0.228 n y n ruditapes2_c1530 ? 0.639 0 0.221 n y n ruditapes2_c5317 ? 0.639 death-associated protein 0 0.221 n y n ruditapes2_lrc5761 ? 0.639 0 0.221 n y n ruditapes_c12892 ? 0.639 0 0.22 n y n ruditapes_c18573 ? 0.639 0 0.22 n y n ruditapes_s35945 ? 0.639 ubiquinol-cytochrome c reductase binding protein /// 0022900 // electron transport chain /// 0005743 // mitochondrial inner membrane 0 0.22 n y n ruditapes_c7945 -3.212 0.639 hypothetical protein BRAFLDRAFT_74510 [Branchiostoma floridae] 0.616 0.192 n y n ruditapes_c13077 -3.336 0.639 voltage and ligand gated potassium channel /// 0007417 // central nervous system development /// 0003700 // transcription factor activity /// 0004879 // ligand-dependent nuclear receptor activity /// 0008076 // voltage-gated potassium channel complex /// 0042066 // perineurial glial growth /// 0005634 // nucleus /// 0048150 // behavioral response to ether /// 0007629 // flight behavior /// 0005249 // voltage-gated potassium channel activity /// 0008016 // regulation of heart contraction /// 0007611 // learning or memory /// 0007165 // signal transduction /// 0006813 // potassium ion transport /// 0007608 // sensory perception of smell /// 0007619 // courtship behavior 0.588 0.176 n y n ruditapes_c9928 -3.494 0.639 predicted protein [Nematostella vectensis] 0.561 0.161 n y n ruditapes_c19414 -3.706 0.639 0.528 0.143 n y n ruditapes_s37738 -4.448 0.639 0.453 0.102 n y n ruditapes_c11762 -5.559 0.639 protein 0.388 0.07 n y n ruditapes_c15448 -5.559 0.639 0.388 0.07 n y n ruditapes_c19159 -5.559 0.639 0.388 0.07 n y n ruditapes_c28870 -8.895 0.639 0.312 0.035 n y n ruditapes_c22657 -? 0.639 0.22 0 n y n ruditapes_c26384 -? 0.639 0.22 0 n y n ruditapes2_c260 -1.123 0.64 nol1 nop2 sun domain member 2 38.558 34.321 n n n ruditapes_lrc6858 1.45 0.64 s-adenosylhomocysteine hydrolase 2.55 3.698 n n n ruditapes_c17739 -1.522 0.64 3.189 2.096 n y n ruditapes_c30539 -1.575 0.64 2.768 1.758 n y n ruditapes2_c1537 -1.588 0.64 2.678 1.686 n y n ruditapes_c25403 -1.718 0.64 2.031 1.182 n y n ruditapes_c28889 -1.843 0.64 1.645 0.893 n y n ruditapes_c28500 -1.89 0.64 1.539 0.814 n y n ruditapes2_c419 -1.897 0.64 histone h1b 1.528 0.805 n y n ruditapes_c29413 -1.906 0.64 hypothetical protein BRAFLDRAFT_115113 [Branchiostoma floridae] 1.506 0.79 n y n ruditapes_c5395 2.848 0.64 0.244 0.694 n y n ruditapes_c14760 -2.107 0.64 1.19 0.565 n y n ruditapes_c2562 4.497 0.64 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 0.097 0.438 n y n ruditapes_c23220 -2.78 0.64 0.732 0.263 n y n ruditapes_c17594 -2.859 0.64 0.707 0.247 n y n ruditapes_c18167 -2.859 0.64 mannose-binding c-type lectin /// 0006810 // transport /// 0005529 // sugar binding /// 0002376 // immune system process /// 0019058 // viral infectious cycle /// 0016337 // cell-cell adhesion /// 0044464 // cell part /// 0019048 // virus-host interaction 0.704 0.246 n y n ruditapes_c18931 -2.965 0.64 atrial natriuretic peptide /// 0006182 // cGMP biosynthetic process /// 0004713 // protein tyrosine kinase activity /// 0005488 // binding /// 0016020 // membrane /// 0004888 // transmembrane receptor activity /// 0004383 // guanylate cyclase activity 0.671 0.226 n y n ruditapes2_lrc6743 ? 0.64 predicted protein [Nematostella vectensis] 0 0.219 n y n ruditapes_c25438 ? 0.64 0 0.219 n y n ruditapes_c14128 ? 0.64 0 0.218 n y n ruditapes_c26872 ? 0.64 receptor protein notch1 0 0.218 n y n ruditapes_c15492 -4.448 0.64 0.448 0.101 n y n ruditapes_c21661 -5.559 0.64 glutamate synthase "/// 0005488 // binding /// 0008152 // metabolic process /// 0016638 // oxidoreductase activity, acting on the CH-NH2 group of donors" 0.386 0.069 n y n ruditapes2_c2017 -6.671 0.64 0.35 0.052 n y n ruditapes_c22607 -8.895 0.64 0.31 0.035 n y n ruditapes_c9874 -13.343 0.64 0.276 0.021 n y n ruditapes2_c2543 -? 0.64 PREDICTED: hypothetical protein [Taeniopygia guttata] 0.219 0 n y n ruditapes_c7064 -1.224 0.641 12.581 10.276 n n n ruditapes_c9400 1.356 0.641 3.86 5.236 n n n ruditapes2_c1853 -1.42 0.641 4.404 3.102 n n n ruditapes_c23116 -1.549 0.641 2.938 1.897 n y n ruditapes_c15887 1.761 0.641 1.011 1.781 n y n ruditapes_c16182 -1.697 0.641 2.102 1.239 n y n ruditapes_c19681 -1.812 0.641 1.722 0.95 n y n ruditapes_c15243 -1.99 0.641 1.344 0.676 n y n ruditapes_c22785 -2.022 0.641 1.293 0.64 n y n ruditapes_c16719 3.448 0.641 chromosome 20 open reading frame 29 0.16 0.552 n y n ruditapes_c11490 4.047 0.641 tyrosine kinase partial /// 0005488 // binding 0.118 0.476 n y n ruditapes_c18431 -2.426 0.641 0.899 0.371 n y n ruditapes_c12337 -2.859 0.641 0.7 0.245 n y n ruditapes2_c6074 ? 0.641 nadh dehydrogenase 1 alpha 7 ( ) /// 0005739 // mitochondrion 0 0.218 n y n ruditapes_c19517 ? 0.641 0 0.218 n y n ruditapes_c19595 ? 0.641 0 0.218 n y n ruditapes_c24439 ? 0.641 0 0.218 n y n ruditapes_c30578 ? 0.641 0 0.218 n y n ruditapes_c19669 ? 0.641 chromosome transmission fidelity factor 8 homolog 0 0.217 n y n ruditapes_c28909 ? 0.641 0 0.217 n y n ruditapes2_c2637 -3.494 0.641 tumor necrosis alpha-induced protein 8 /// 0019987 // negative regulation of anti-apoptosis /// 0043027 // caspase inhibitor activity /// 0005515 // protein binding /// 0005737 // cytoplasm 0.553 0.158 n y n ruditapes_c2702 -5.559 0.641 mitochondrial ribosomal 0.383 0.069 n y n ruditapes_c9801 -5.559 0.641 0.383 0.069 n y n ruditapes2_lrc3947 -6.671 0.641 0.347 0.052 n y n ruditapes_c24412 -6.671 0.641 0.347 0.052 n y n ruditapes_c8949 -? 0.641 0.218 0 n y n ruditapes_c12926 -? 0.641 0.217 0 n y n ruditapes_c25456 -? 0.641 0.217 0 n y n ruditapes_c28376 -? 0.641 0.217 0 n y n ruditapes2_c6668 1.168 0.642 15.244 17.806 n n n ruditapes_c26078 -1.214 0.642 13.545 11.155 n n n ruditapes2_c1646 -1.295 0.642 beta-ig-h3 fasciclin 7.774 6.001 n n n ruditapes_c16671 1.339 0.642 4.208 5.634 n n n ruditapes_c12415 -1.433 0.642 4.173 2.912 n n n ruditapes_c16012 -1.472 0.642 3.652 2.481 n n n ruditapes_c8900 -1.492 0.642 3.435 2.303 n n n ruditapes_c26780 -1.52 0.642 3.164 2.082 n y n ruditapes_c17238 1.927 0.642 0.724 1.395 n y n ruditapes_c14117 -1.722 0.642 1.997 1.16 n y n ruditapes2_c294 2.099 0.642 solute carrier family member 1 /// 0006810 // transport /// 0008152 // metabolic process /// 0044464 // cell part 0.546 1.146 n y n ruditapes_c27676 -1.73 0.642 1.96 1.133 n y n ruditapes_c20057 2.12 0.642 0.528 1.12 n y n ruditapes_c31172 -1.913 0.642 1.475 0.771 n y n ruditapes_c25534 -2.053 0.642 predicted protein [Laccaria bicolor S238N-H82] 1.244 0.606 n y n ruditapes_c34966 3.298 0.642 60s ribosomal protein l35 /// 0007275 // multicellular organismal development /// 0051726 // regulation of cell cycle 0.175 0.576 n y n ruditapes_c14321 -2.224 0.642 1.05 0.472 n y n ruditapes_c15317 -2.224 0.642 type alpha 1 /// 0005198 // structural molecule activity /// 0005578 // proteinaceous extracellular matrix 1.05 0.472 n y n ruditapes_c5345 -2.859 0.642 0.697 0.244 n y n ruditapes_c12958 -2.859 0.642 0.696 0.243 n y n ruditapes_c28620 ? 0.642 0 0.217 n y n ruditapes_c19376 ? 0.642 c-specific lectin 0 0.216 n y n ruditapes_c19597 ? 0.642 0 0.216 n y n ruditapes_c20347 ? 0.642 0 0.216 n y n ruditapes_c26715 ? 0.642 0 0.216 n y n ruditapes_c5310 ? 0.642 0 0.216 n y n ruditapes_lrc23144 ? 0.642 0 0.216 n y n ruditapes_c14618 -4.448 0.642 0.444 0.1 n y n ruditapes_c19471 -5.559 0.642 0.38 0.068 n y n ruditapes_c8680 -5.559 0.642 serine proteinase 0.38 0.068 n y n ruditapes_c17317 -8.895 0.642 0.306 0.034 n y n ruditapes_c28096 -? 0.642 0.217 0 n y n ruditapes2_c3120 -1.214 0.643 ependymin precursor 13.542 11.156 n n n ruditapes_c27677 -1.23 0.643 11.892 9.67 n n n ruditapes_c13357 1.307 0.643 5.019 6.56 n n n ruditapes_c12534 -1.35 0.643 5.819 4.311 n n n ruditapes_c14112 -1.372 0.643 5.295 3.86 n n n ruditapes_lrc11451 -1.393 0.643 cg12324 protein /// 0005811 // lipid particle /// 0030529 // ribonucleoprotein complex /// 0000022 // mitotic spindle elongation 4.829 3.466 n n n ruditapes_c29069 -1.398 0.643 4.723 3.378 n n n ruditapes_c16862 -1.49 0.643 mitochondrial ribosomal 3.438 2.307 n n n ruditapes_lrc39627 1.649 0.643 chorion b-zip transcription factor /// 0003677 // DNA binding 1.318 2.173 n y n ruditapes_c14991 1.686 0.643 1.198 2.021 n y n ruditapes_c15180 -1.578 0.643 2.7 1.711 n y n ruditapes_c2319 -1.722 0.643 1.979 1.15 n y n ruditapes_lrc33908 2.323 0.643 epididymal secretory protein e1 precursor /// 0006869 // lipid transport /// 0044424 // intracellular part 0.402 0.933 n y n ruditapes_c22049 2.848 0.643 protein 0.24 0.683 n y n ruditapes_c10382 -2.009 0.643 probable e3 ubiquitin-protein ligase rnf144a-a 1.297 0.646 n y n ruditapes_c12727 2.998 0.643 0.213 0.64 n y n ruditapes_c19259 -2.224 0.643 heat shock 70kda protein 12a 1.044 0.469 n y n ruditapes2_c473 -2.575 0.643 placenta-specificprotein 8 protein (c15 protein) 0.806 0.313 n y n ruditapes2_c906 -2.628 0.643 0.78 0.297 n y n ruditapes_c20451 ? 0.643 0 0.215 n y n ruditapes_c10474 ? 0.643 0 0.214 n y n ruditapes_c24325 ? 0.643 0 0.214 n y n ruditapes_c14860 -3.336 0.643 hedgehog interacting protein 0.574 0.172 n y n ruditapes2_c2458 -4.003 0.643 0.48 0.12 n y n ruditapes_c26674 -4.448 0.643 0.442 0.099 n y n ruditapes_c24880 -4.448 0.643 0.44 0.099 n y n ruditapes_c8816 -5.93 0.643 PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] 0.364 0.061 n y n ruditapes_s33464 -6.671 0.643 ccaat enhancer binding protein 0.343 0.051 n y n ruditapes_lrc28997 -13.343 0.643 0.271 0.02 n y n ruditapes_c21140 -? 0.643 0.215 0 n y n ruditapes_c26946 -? 0.643 0.215 0 n y n ruditapes_c27240 -? 0.643 0.215 0 n y n ruditapes_c11232 -1.231 0.644 11.732 9.531 n n n ruditapes_lrc36222 -1.31 0.644 ribosomal protein s6 7.07 5.395 n n n ruditapes2_c2428 -1.327 0.644 pih1d1 protein 6.462 4.87 n n n ruditapes_lrc32581 -1.366 0.644 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0051082 // unfolded protein binding /// 0006457 // protein folding 5.377 3.937 n n n ruditapes_c26722 1.439 0.644 2.606 3.751 n n n ruditapes_c9222 -1.382 0.644 5.015 3.628 n n n ruditapes_lrc32164 -1.386 0.644 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 4.934 3.559 n n n ruditapes_c402 1.503 0.644 2.047 3.076 n y n ruditapes_c29254 -1.425 0.644 4.238 2.975 n n n ruditapes_c30890 -1.445 0.644 3.938 2.724 n n n ruditapes_c18490 -1.448 0.644 3.926 2.712 n n n ruditapes_c16363 1.601 0.644 1.496 2.394 n y n ruditapes_c22187 -1.503 0.644 3.27 2.175 n y n ruditapes_c25991 -1.601 0.644 2.533 1.582 n y n ruditapes_c24182 1.833 0.644 nucleolar protein 14 /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0030490 // maturation of SSU-rRNA /// 0030515 // snoRNA binding 0.851 1.56 n y n ruditapes_c5736 -1.752 0.644 1.86 1.062 n y n ruditapes2_lrc6730 3.148 0.644 0.19 0.599 n y n ruditapes_c13590 -2.085 0.644 1.189 0.57 n y n ruditapes_lrc38322 -2.224 0.644 ribosomal protein l26e /// 0006414 // translational elongation /// 0015934 // large ribosomal subunit /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 1.041 0.468 n y n ruditapes_c15401 4.947 0.644 0.081 0.401 n y n ruditapes_c6563 5.846 0.644 0.062 0.362 n y n ruditapes_c29594 -2.78 0.644 protein 0.716 0.258 n y n ruditapes2_c2498 ? 0.644 0 0.214 n y n ruditapes_c14282 ? 0.644 0 0.214 n y n ruditapes_c21826 ? 0.644 0 0.214 n y n ruditapes_c26444 ? 0.644 0 0.214 n y n ruditapes_c17928 ? 0.644 0 0.213 n y n ruditapes_c22971 ? 0.644 speckle-type poz protein 0 0.213 n y n ruditapes_c24371 ? 0.644 0 0.213 n y n ruditapes_c28783 ? 0.644 0 0.213 n y n ruditapes_c26820 -3.706 0.644 0.514 0.139 n y n ruditapes_c23022 -6.671 0.644 novel egf domain containing partial 0.341 0.051 n y n ruditapes_c17628 -8.895 0.644 0.303 0.034 n y n ruditapes_c8245 -8.895 0.644 0.302 0.034 n y n ruditapes_c5363 -11.119 0.644 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0006096 // glycolysis /// 0045454 // cell redox homeostasis /// 0008340 // determination of adult lifespan /// 0006098 // pentose-phosphate shunt /// 0005737 // cytoplasm /// 0006094 // gluconeogenesis 0.282 0.025 n y n ruditapes_c22841 -? 0.644 0.214 0 n y n ruditapes_s38553 -? 0.644 0.214 0 n y n ruditapes_c26530 -? 0.644 0.213 0 n y n ruditapes_c13537 -1.327 0.645 6.422 4.841 n n n ruditapes_lrc34679 1.574 0.645 1.613 2.539 n y n ruditapes_c8488 1.657 0.645 1.274 2.11 n y n ruditapes_c18019 1.714 0.645 1.104 1.892 n y n ruditapes_lrc38796 1.724 0.645 1.08 1.862 n y n ruditapes_c7270 -1.554 0.645 2.83 1.821 n y n ruditapes_c11352 -1.779 0.645 hypothetical protein BRAFLDRAFT_117187 [Branchiostoma floridae] 1.769 0.994 n y n ruditapes2_c5835 2.323 0.645 nascent polypeptide-associated complex subunit alpha /// 0034961 // cellular biopolymer biosynthetic process /// 0003713 // transcription coactivator activity /// 0044238 // primary metabolic process /// 0005634 // nucleus /// 0010467 // gene expression /// 0005737 // cytoplasm /// 0017025 // TATA-binding protein binding 0.398 0.925 n y n ruditapes_c10284 2.473 0.645 0.335 0.828 n y n ruditapes_c26172 -1.882 0.645 GE13565 [Drosophila yakuba] 1.512 0.804 n y n ruditapes_c8073 -1.89 0.645 novel protein vertebrate chondroitin sulfate proteoglycan family 1.488 0.787 n y n ruditapes_c35413 2.698 0.645 0.269 0.725 n y n ruditapes_c19209 -1.99 0.645 1.312 0.659 n y n ruditapes_c7712 -2.059 0.645 glyoxylate reductase hydroxypyruvate reductase /// 0030267 // glyoxylate reductase (NADP) activity /// 0031406 // carboxylic acid binding /// 0055114 // oxidation reduction /// 0043648 // dicarboxylic acid metabolic process /// 0016618 // hydroxypyruvate reductase activity /// 0008465 // glycerate dehydrogenase activity /// 0051287 // NAD or NADH binding /// 0005515 // protein binding /// 0007588 // excretion /// 0050661 // NADP or NADPH binding /// 0005829 // cytosol 1.214 0.589 n y n ruditapes_c2083 4.272 0.645 acrosin precursor /// 0003824 // catalytic activity 0.104 0.445 n y n ruditapes_c88 5.396 0.645 0.07 0.377 n y n ruditapes_c30167 -2.446 0.645 0.866 0.354 n y n ruditapes_c25902 -2.471 0.645 0.85 0.344 n y n ruditapes_c21468 -3.706 0.645 0.509 0.137 n y n ruditapes_c17087 -4.003 0.645 0.474 0.118 n y n ruditapes_c24207 -4.448 0.645 0.435 0.098 n y n ruditapes_c22827 -5.559 0.645 0.374 0.067 n y n ruditapes_c22978 -5.559 0.645 0.374 0.067 n y n ruditapes_c12043 -8.895 0.645 0.301 0.034 n y n ruditapes_c23322 -8.895 0.645 0.301 0.034 n y n ruditapes_c11910 -8.895 0.645 0.3 0.034 n y n ruditapes_c3590 -11.119 0.645 0.28 0.025 n y n ruditapes_c21598 -? 0.645 0.212 0 n y n ruditapes_s35803 -1.143 0.646 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 28.178 24.656 n n n ruditapes2_c940 -1.233 0.646 nadh-ubiquinone oxidoreductase b8 subunit 11.43 9.271 n n n ruditapes_c19866 -1.263 0.646 9.236 7.314 n n n ruditapes2_c4860 1.336 0.646 isoform d 4.171 5.571 n n n ruditapes_c8486 1.384 0.646 zinc and double phd fingers family 2 "/// 0006355 // regulation of transcription, DNA-dependent /// 0005634 // nucleus /// 0005515 // protein binding /// 0016568 // chromatin modification /// 0008270 // zinc ion binding" 3.287 4.548 n n n ruditapes_c29650 -1.413 0.646 4.371 3.093 n n n ruditapes_c14395 1.606 0.646 1.459 2.343 n y n ruditapes_c31166 -1.557 0.646 2.796 1.796 n y n ruditapes_c27782 1.881 0.646 0.77 1.448 n y n ruditapes_c16163 -1.684 0.646 trafficking protein particle complex 1 /// 0005515 // protein binding /// 0030008 // TRAPP complex /// 0006888 // ER to Golgi vesicle-mediated transport /// 0005783 // endoplasmic reticulum 2.091 1.242 n y n ruditapes_lrc33560 2.049 0.646 thymosin beta-12 0.575 1.178 n y n ruditapes_c16809 2.056 0.646 0.57 1.172 n y n ruditapes_c13878 -1.825 0.646 1.63 0.893 n y n ruditapes_c29454 -1.939 0.646 1.393 0.719 n y n ruditapes_c2414 -1.946 0.646 transmembrane protein 14c /// 0005739 // mitochondrion /// 0016021 // integral to membrane 1.381 0.71 n y n ruditapes2_lrc3908 -1.986 0.646 1.312 0.661 n y n ruditapes_c30581 -2.038 0.646 1.233 0.605 n y n ruditapes_c11418 -2.046 0.646 zinc finger protein 1.222 0.597 n y n ruditapes_c7061 -2.123 0.646 sarcoplasmic calcium-binding protein 1.131 0.533 n y n ruditapes_c29737 -2.127 0.646 1.12 0.527 n y n ruditapes_c23403 -2.224 0.646 1.025 0.461 n y n ruditapes_c25675 -2.224 0.646 1.023 0.46 n y n ruditapes2_c3015 -2.316 0.646 0.948 0.409 n y n ruditapes_c286 -2.965 0.646 0.649 0.219 n y n ruditapes_c38817 ? 0.646 0 0.212 n y n ruditapes_c9412 ? 0.646 0 0.212 n y n ruditapes_c24293 ? 0.646 nicotinic acetylcholine receptor subunit type g 0 0.211 n y n ruditapes_c5359 ? 0.646 0 0.211 n y n ruditapes_s37065 ? 0.646 ferritin-like protein /// 0005488 // binding 0 0.211 n y n ruditapes_c30610 -3.336 0.646 0.564 0.169 n y n ruditapes_c23165 -3.558 0.646 0.527 0.148 n y n ruditapes_c5086 -5.559 0.646 0.372 0.067 n y n ruditapes_c3262 -6.671 0.646 chondroitin sulfate proteoglycan 2 0.337 0.05 n y n ruditapes_c14290 -? 0.646 0.211 0 n y n ruditapes_c14660 -? 0.646 0.211 0 n y n ruditapes_c26526 -? 0.646 0.211 0 n y n ruditapes2_c1494 -1.11 0.647 46.385 41.784 n n n ruditapes_c1587 -1.361 0.647 5.401 3.967 n n n ruditapes_c17293 -1.37 0.647 5.181 3.782 n n n ruditapes_c10659 1.485 0.647 vacuolar atp synthase subunit s1 /// 0044464 // cell part 2.14 3.177 n n n ruditapes_c36231 -1.412 0.647 4.381 3.104 n n n ruditapes_c6628 1.504 0.647 2.008 3.02 n y n ruditapes_c27525 1.553 0.647 1.701 2.642 n y n ruditapes_c3560 -1.502 0.647 3.224 2.146 n y n ruditapes_c13361 1.84 0.647 0.827 1.522 n y n ruditapes2_c1811 2.056 0.647 cpyc type 0.564 1.159 n y n ruditapes_lrc36156 2.248 0.647 calponin homolog 0.429 0.965 n y n ruditapes_c35001 2.698 0.647 beta-ig-h3 fasciclin 0.266 0.717 n y n ruditapes_c20525 2.848 0.647 0.233 0.665 n y n ruditapes2_lrc6063 -2.093 0.647 fatty acid binding protein 4 /// 0006810 // transport /// 0044444 // cytoplasmic part /// 0005215 // transporter activity /// 0045444 // fat cell differentiation /// 0005504 // fatty acid binding /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0006631 // fatty acid metabolic process /// 0016528 // sarcoplasm /// 0050794 // regulation of cellular process 1.158 0.553 n y n ruditapes_c8875 -2.118 0.647 1.13 0.533 n y n ruditapes_c25763 -2.669 0.647 0.747 0.28 n y n ruditapes_c12107 -2.965 0.647 0.646 0.218 n y n ruditapes2_lrc5303 ? 0.647 0 0.21 n y n ruditapes_c20063 ? 0.647 0 0.21 n y n ruditapes_c22444 ? 0.647 0 0.21 n y n ruditapes_c26544 ? 0.647 0 0.21 n y n ruditapes_c12480 ? 0.647 0 0.209 n y n ruditapes_c30777 ? 0.647 0 0.209 n y n ruditapes_c28681 -3.058 0.647 solute carrier family member 1 /// 0044425 // membrane part /// 0005886 // plasma membrane /// 0051181 // cofactor transport /// 0051184 // cofactor transporter activity 0.619 0.203 n y n ruditapes_c26737 -3.706 0.647 0.503 0.136 n y n ruditapes_c14988 -6.671 0.647 0.335 0.05 n y n ruditapes_c21924 -6.671 0.647 0.334 0.05 n y n ruditapes_c565 -? 0.647 0.21 0 n y n ruditapes_lrc23921 -? 0.647 0.21 0 n y n ruditapes2_c1377 -1.188 0.648 16.537 13.915 n n n ruditapes_c6513 -1.215 0.648 13.011 10.711 n n n ruditapes_c13754 -1.261 0.648 9.227 7.315 n n n ruditapes_c29876 -1.268 0.648 8.835 6.967 n n n ruditapes2_c2112 1.36 0.648 3.636 4.944 n n n ruditapes_c34283 1.627 0.648 1.354 2.203 n y n ruditapes_c19398 1.967 0.648 0.649 1.276 n y n ruditapes_c30761 2.136 0.648 0.497 1.062 n y n ruditapes_c21963 2.173 0.648 0.472 1.027 n y n ruditapes_c25021 -1.837 0.648 ankyrin repeat domain 5 1.584 0.862 n y n ruditapes_c20435 -1.853 0.648 protein 1.546 0.834 n y n ruditapes_c21735 2.473 0.648 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.329 0.814 n y n ruditapes_c11106 -1.921 0.648 1.407 0.732 n y n ruditapes_c17054 -1.977 0.648 1.308 0.662 n y n ruditapes_lrc32880 -2.372 0.648 0.898 0.379 n y n ruditapes_c16799 -2.594 0.648 0.776 0.299 n y n ruditapes_c27969 -2.7 0.648 0.727 0.269 n y n ruditapes2_c1648 ? 0.648 0 0.209 n y n ruditapes_c17922 ? 0.648 0 0.209 n y n ruditapes_s40396 ? 0.648 0 0.209 n y n ruditapes_c17559 ? 0.648 0 0.208 n y n ruditapes_c17839 -3.892 0.648 0.479 0.123 n y n ruditapes2_lrc6475 -5.559 0.648 0.368 0.066 n y n ruditapes_c9226 -8.895 0.648 PREDICTED: similar to polyprotein [Strongylocentrotus purpuratus] 0.296 0.033 n y n ruditapes_c13368 -8.895 0.648 0.295 0.033 n y n ruditapes_c14877 -? 0.648 0.209 0 n y n ruditapes_c24296 -? 0.648 0.209 0 n y n ruditapes_c25600 -? 0.648 0.209 0 n y n ruditapes_lrc27065 -? 0.648 0.209 0 n y n ruditapes_c642 -1.067 0.649 125.592 117.67 n n n ruditapes_c2620 1.122 0.649 26.216 29.422 n n n ruditapes_c23374 1.301 0.649 5.006 6.51 n n n ruditapes2_c431 1.394 0.649 3.068 4.277 n n n ruditapes_c17801 -1.354 0.649 5.512 4.072 n n n ruditapes_c2225 -1.397 0.649 4.595 3.289 n n n ruditapes_c1234 -1.466 0.649 3.567 2.433 n n n ruditapes_s34832 1.602 0.649 1.451 2.324 n y n ruditapes_c5773 -1.483 0.649 3.38 2.28 n n n ruditapes_c20348 -1.588 0.649 2.53 1.593 n y n ruditapes_c21112 -1.631 0.649 gamma-glutamyltransferase 1 2.299 1.41 n y n ruditapes_c18903 2.099 0.649 pr domain containing 11 0.523 1.097 n y n ruditapes2_c1895 -1.74 0.649 deafness dystonia protein /// 0006810 // transport 1.851 1.063 n y n ruditapes_lrc32806 -1.921 0.649 nadh dehydrogenase 1 beta 8kda precursor 1.399 0.728 n y n ruditapes_lrc36568 2.848 0.649 galactose soluble 3 0.231 0.659 n y n ruditapes_c14981 -2.076 0.649 1.162 0.56 n y n ruditapes_c4962 3.373 0.649 0.16 0.539 n y n ruditapes_c18694 -2.224 0.649 1.009 0.454 n y n ruditapes_c17469 -2.224 0.649 1.007 0.453 n y n ruditapes_c31256 -2.446 0.649 0.847 0.346 n y n ruditapes_c17577 -2.541 0.649 0.795 0.313 n y n ruditapes_c16636 -2.718 0.649 cytosolic phospholipase a2 /// 0004623 // phospholipase A2 activity /// 0046872 // metal ion binding /// 0016021 // integral to membrane /// 0005829 // cytosol /// 0006690 // icosanoid metabolic process /// 0006663 // platelet activating factor biosynthetic process /// 0016042 // lipid catabolic process 0.717 0.264 n y n ruditapes_c13083 ? 0.649 0 0.207 n y n ruditapes_c22764 ? 0.649 0 0.207 n y n ruditapes_c23327 ? 0.649 0 0.207 n y n ruditapes_c6981 ? 0.649 0 0.207 n y n ruditapes_lrc34257 ? 0.649 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0 0.207 n y n ruditapes_c10027 -3.494 0.649 whey acidic protein 0.527 0.151 n y n ruditapes_lrc19105 -3.558 0.649 0.517 0.145 n y n ruditapes_c15601 -8.895 0.649 0.293 0.033 n y n ruditapes_c22376 -? 0.649 0.207 0 n y n ruditapes_c27136 -? 0.649 0.207 0 n y n ruditapes_c27464 -? 0.649 0.207 0 n y n ruditapes_c31909 -? 0.649 0.207 0 n y n ruditapes_lrc31911 -? 0.649 0.207 0 n y n ruditapes_lrc37801 -? 0.649 0.207 0 n y n ruditapes_c4086 1.111 0.65 myc homolog 31.222 34.679 n n n ruditapes_c22217 -1.145 0.65 survival motor neuron domain containing 1 "/// 0008380 // RNA splicing /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0006397 // mRNA processing /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0006917 // induction of apoptosis" 26.419 23.064 n n n ruditapes2_c79 -1.165 0.65 ccaat enhancer binding protein "/// 0016563 // transcription activator activity /// 0045408 // regulation of interleukin-6 biosynthetic process /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0045444 // fat cell differentiation /// 0043565 // sequence-specific DNA binding /// 0006916 // anti-apoptosis /// 0046982 // protein heterodimerization activity /// 0016491 // oxidoreductase activity /// 0016363 // nuclear matrix /// 0006917 // induction of apoptosis /// 0003705 // RNA polymerase II transcription factor activity, enhancer binding /// 0005737 // cytoplasm /// 0030182 // neuron differentiation /// 0042803 // protein homodimerization activity" 20.951 17.988 n n n ruditapes_c27095 1.244 0.65 7.316 9.103 n n n ruditapes_c1762 -1.345 0.65 mitochondrial ribosomal protein s26 5.701 4.239 n n n ruditapes_c27508 -1.418 0.65 4.198 2.96 n n n ruditapes_c22222 -1.43 0.65 4.013 2.807 n n n ruditapes_c3001 1.566 0.65 1.603 2.51 n y n ruditapes_c7207 1.581 0.65 abl interactor 2 "/// 0031258 // lamellipodium membrane /// 0048471 // perinuclear region of cytoplasm /// 0022416 // bristle development /// 0005515 // protein binding /// 0006911 // phagocytosis, engulfment /// 0030032 // lamellipodium assembly /// 0016203 // muscle attachment /// 0045860 // positive regulation of protein kinase activity /// 0030866 // cortical actin cytoskeleton organization /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape" 1.528 2.416 n y n ruditapes2_c2963 -1.503 0.65 3.175 2.113 n y n ruditapes2_c692 -1.511 0.65 3.089 2.044 n y n ruditapes_c27461 -1.549 0.65 2.78 1.795 n y n ruditapes2_c5126 -1.625 0.65 2.306 1.419 n y n ruditapes_c26608 1.889 0.65 0.74 1.398 n y n ruditapes_c3907 -1.73 0.65 1.869 1.08 n y n ruditapes2_c1795 -1.788 0.65 ependymin-related protein 1.689 0.945 n y n ruditapes_c27119 -1.819 0.65 1.605 0.882 n y n ruditapes_c12280 2.428 0.65 0.341 0.827 n y n ruditapes2_c5983 -1.962 0.65 1.316 0.671 n y n ruditapes_c13908 3.035 0.65 0.199 0.604 n y n ruditapes_s36259 4.947 0.65 40s ribosomal protein s4 /// 0005622 // intracellular 0.078 0.387 n y n ruditapes_lrc13055 -2.471 0.65 0.828 0.335 n y n ruditapes_c6311 -2.594 0.65 0.767 0.296 n y n ruditapes2_lrc5172 -2.628 0.65 gm2 activator protein 0.747 0.284 n y n ruditapes_c16373 -2.78 0.65 0.69 0.248 n y n ruditapes_c3667 -2.83 0.65 0.675 0.238 n y n ruditapes_c1992 ? 0.65 0 0.206 n y n ruditapes_c15825 ? 0.65 mannose-binding lectin-associated serine protease /// 0003824 // catalytic activity 0 0.205 n y n ruditapes_c28576 ? 0.65 0 0.205 n y n ruditapes_c23795 -3.706 0.65 0.493 0.133 n y n ruditapes_s36159 -4.448 0.65 0.423 0.095 n y n ruditapes_s38479 -6.671 0.65 0.33 0.049 n y n ruditapes_lrc34379 -11.119 0.65 0.271 0.024 n y n ruditapes_c25380 -? 0.65 0.206 0 n y n ruditapes_s34871 -? 0.65 0.206 0 n y n ruditapes_c10940 -? 0.65 0.205 0 n y n ruditapes_lrc32784 -1.09 0.651 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 68.312 62.695 n n n ruditapes2_c3472 -1.13 0.651 32.618 28.861 n n n ruditapes_c8785 -1.199 0.651 14.665 12.23 n n n ruditapes_c16744 -1.211 0.651 13.273 10.963 n n n ruditapes_c17414 1.413 0.651 2.782 3.932 n n n ruditapes_c4436 -1.359 0.651 5.313 3.91 n n n ruditapes_c4220 -1.36 0.651 5.298 3.895 n n n ruditapes_c13140 -1.443 0.651 3.816 2.645 n n n ruditapes_c18516 -1.495 0.651 3.222 2.156 n n n ruditapes2_c5708 1.724 0.651 1.039 1.791 n y n ruditapes_c19512 1.844 0.651 peptidoglycan recognition protein l 0.799 1.473 n y n ruditapes_s39849 1.949 0.651 0.659 1.285 n y n ruditapes_lrc19166 1.967 0.651 dynein light chain cytoplasmic /// 0030286 // dynein complex /// 0002119 // nematode larval development /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007017 // microtubule-based process 0.637 1.252 n y n ruditapes_lrc14511 2.024 0.651 60s ribosomal protein l11 /// 0005840 // ribosome /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 0.579 1.171 n y n ruditapes_c10335 -1.73 0.651 member ras oncogene family /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0005515 // protein binding /// 0009987 // cellular process 1.855 1.072 n y n ruditapes_c15192 -1.796 0.651 phospholipid scramblase 1.654 0.921 n y n ruditapes_c23562 2.361 0.651 hypothetical protein [Brugia malayi] 0.366 0.864 n y n ruditapes_c20947 -1.853 0.651 1.522 0.821 n y n ruditapes_c16486 -1.927 0.651 1.37 0.711 n y n ruditapes2_c609 2.968 0.651 gamma-secretase subunit pen-2 /// 0005794 // Golgi apparatus /// 0005515 // protein binding /// 0043085 // positive regulation of catalytic activity /// 0042987 // amyloid precursor protein catabolic process /// 0007220 // Notch receptor processing /// 0005783 // endoplasmic reticulum /// 0006509 // membrane protein ectodomain proteolysis /// 0005887 // integral to plasma membrane /// 0016485 // protein processing 0.208 0.617 n y n ruditapes2_c2253 4.272 0.651 0.1 0.427 n y n ruditapes2_c4014 5.396 0.651 heat shock protein 22 isoform 1 0.068 0.364 n y n ruditapes_c22768 -2.965 0.651 0.631 0.213 n y n ruditapes_c9751 ? 0.651 hypothetical protein BRAFLDRAFT_67696 [Branchiostoma floridae] 0 0.205 n y n ruditapes_lrc17362 ? 0.651 tumor suppressor candidate 5 0 0.205 n y n ruditapes_lrc34908 ? 0.651 0 0.205 n y n ruditapes2_c531 ? 0.651 0 0.204 n y n ruditapes_c11886 ? 0.651 0 0.204 n y n ruditapes_c14690 ? 0.651 0 0.204 n y n ruditapes_c17419 ? 0.651 0 0.204 n y n ruditapes_c24265 ? 0.651 pleckstrin homology domain family a (phosphoinositide binding specific) member 1 0 0.204 n y n ruditapes_c9324 ? 0.651 0 0.204 n y n ruditapes_s40012 ? 0.651 0 0.204 n y n ruditapes_c7725 -3.706 0.651 0.491 0.132 n y n ruditapes_c25207 -4.448 0.651 0.421 0.095 n y n ruditapes2_c5910 -6.671 0.651 proteasome subunit alpha type-3 0.327 0.049 n y n ruditapes_lrc28234 -13.343 0.651 wsc domain containing protein 0.258 0.019 n y n ruditapes_c34989 -? 0.651 beta 2c /// 0030424 // axon /// 0016043 // cellular component organization /// 0015630 // microtubule cytoskeleton /// 0000166 // nucleotide binding /// 0007017 // microtubule-based process 0.205 0 n y n ruditapes_lrc26557 -? 0.651 0.205 0 n y n ruditapes2_c1973 1.274 0.652 5.815 7.409 n n n ruditapes_c15773 -1.257 0.652 9.241 7.35 n n n ruditapes2_lrc6841 -1.316 0.652 eukaryotic translation initiation factor subunit h /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0005792 // microsome 6.524 4.956 n n n ruditapes2_c335 -1.371 0.652 5.021 3.662 n n n ruditapes_c8398 1.447 0.652 capping protein (actin filament) muscle z- beta /// 0051016 // barbed-end actin filament capping /// 0030027 // lamellipodium /// 0016020 // membrane /// 0003779 // actin binding /// 0008290 // F-actin capping protein complex /// 0030032 // lamellipodium assembly /// 0006928 // cell motion /// 0030863 // cortical cytoskeleton 2.4 3.473 n n n ruditapes_c16083 -1.437 0.652 3.863 2.688 n n n ruditapes2_lrc5523 -1.473 0.652 protein 3.416 2.319 n n n ruditapes_c19612 1.758 0.652 0.954 1.678 n y n ruditapes_c11976 -1.629 0.652 cop9 constitutive photomorphogenic homolog subunit 6 /// 0008180 // signalosome /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0044419 // interspecies interaction between organisms 2.264 1.39 n y n ruditapes_c15684 1.949 0.652 0.652 1.271 n y n ruditapes_c21896 -1.711 0.652 1.918 1.121 n y n ruditapes2_c982 -1.747 0.652 light chain alkali fast 1.788 1.023 n y n ruditapes_c22082 -1.796 0.652 1.65 0.919 n y n ruditapes_c10040 2.848 0.652 0.227 0.646 n y n ruditapes_lrc38417 2.998 0.652 calcium binding protein 1 0.201 0.604 n y n ruditapes_c13894 -2.076 0.652 helentron 4 helitron-like transposon replicase helicase endonuclease 1.14 0.549 n y n ruditapes_c8109 -2.123 0.652 1.085 0.511 n y n ruditapes_lrc38997 -2.131 0.652 stanniocalcin-like protein 1.078 0.506 n y n ruditapes_c6793 6.296 0.652 vacuolar atp synthase subunit e 1 /// 0015992 // proton transport 0.053 0.331 n y n ruditapes_c8148 6.296 0.652 0.053 0.331 n y n ruditapes_c7136 -2.502 0.652 0.799 0.319 n y n ruditapes2_c2589 -2.718 0.652 0.705 0.26 n y n ruditapes_c4630 -2.78 0.652 0.682 0.245 n y n ruditapes_c14552 ? 0.652 0 0.203 n y n ruditapes_c15368 ? 0.652 0 0.203 n y n ruditapes_c1694 ? 0.652 transcription intermediary factor 1-related 0 0.203 n y n ruditapes_c23719 ? 0.652 0 0.203 n y n ruditapes_c31090 ? 0.652 0 0.203 n y n ruditapes_c28694 -3.113 0.652 0.589 0.189 n y n ruditapes_lrc34723 -4.003 0.652 ppia protein 0.455 0.114 n y n ruditapes_c21100 -4.448 0.652 0.418 0.094 n y n ruditapes_c5255 -4.448 0.652 0.417 0.094 n y n ruditapes_c5971 -6.671 0.652 0.326 0.049 n y n ruditapes_c1640 -? 0.652 0.204 0 n y n ruditapes_c14003 -? 0.652 0.203 0 n y n ruditapes_c30928 -? 0.652 0.203 0 n y n ruditapes_c6771 -? 0.652 0.203 0 n y n ruditapes_c31825 1.461 0.653 2.256 3.297 n n n ruditapes_c14640 1.478 0.653 2.119 3.131 n n n ruditapes_c28884 1.529 0.653 1.767 2.702 n y n ruditapes_c25315 -1.522 0.653 2.944 1.935 n y n ruditapes_c30755 1.999 0.653 0.597 1.193 n y n ruditapes_c19855 -1.711 0.653 1.903 1.113 n y n ruditapes_c10602 -1.766 0.653 PREDICTED: similar to CG30419-PA [Nasonia vitripennis] 1.72 0.974 n y n ruditapes2_c3393 2.848 0.653 cysteine- angiogenic 61 0.225 0.642 n y n ruditapes_c1849 -2.038 0.653 1.178 0.578 n y n ruditapes_c20414 -2.076 0.653 anti-dorsalizing morphogenetic protein-2 /// 0005576 // extracellular region /// 0040007 // growth /// 0008083 // growth factor activity 1.133 0.546 n y n ruditapes_c21224 -2.224 0.653 mitotic control protein dis3 /// 0016787 // hydrolase activity 0.983 0.442 n y n ruditapes_c29784 -2.224 0.653 0.983 0.442 n y n ruditapes_c1696 -2.669 0.653 0.721 0.27 n y n ruditapes_lrc27849 -2.78 0.653 0.68 0.245 n y n ruditapes_lrc20778 -2.965 0.653 0.624 0.21 n y n ruditapes2_c1619 ? 0.653 0 0.202 n y n ruditapes2_c2596 ? 0.653 0 0.202 n y n ruditapes_c12375 ? 0.653 0 0.202 n y n ruditapes_c8763 ? 0.653 complement component q subcomponent-like 4 /// 0005515 // protein binding 0 0.202 n y n ruditapes_c21125 -3.113 0.653 0.584 0.187 n y n ruditapes_c30852 -3.177 0.653 transmembrane protein 145 0.572 0.18 n y n ruditapes_c25069 -3.706 0.653 dead (asp-glu-ala-asp) box polypeptide 28 0.484 0.131 n y n ruditapes_c5645 -5.559 0.653 0.356 0.064 n y n ruditapes2_c376 -8.895 0.653 dopamine beta hydroxylase-like protein 0.286 0.032 n y n ruditapes_c28960 -11.119 0.653 ovary-specific c1q-like factor 0.266 0.024 n y n ruditapes_lrc30068 -? 0.653 0.202 0 n y n ruditapes_c14732 1.19 0.654 11.302 13.451 n n n ruditapes_c20054 -1.237 0.654 10.517 8.498 n n n ruditapes_c10176 -1.342 0.654 programmed cell death 7 /// 0009987 // cellular process 5.647 4.207 n n n ruditapes_c25102 -1.347 0.654 5.529 4.104 n n n ruditapes_lrc20269 1.424 0.654 2.618 3.728 n n n ruditapes_c22516 -1.387 0.654 4.634 3.341 n n n ruditapes_c13505 -1.39 0.654 4.566 3.285 n n n ruditapes_c14238 -1.439 0.654 3.801 2.641 n n n ruditapes_c27426 1.624 0.654 1.32 2.143 n y n ruditapes_c29803 -1.573 0.654 2.557 1.625 n y n ruditapes_c7547 -1.584 0.654 "PREDICTED: similar to transposase, partial [Strongylocentrotus purpuratus]" 2.483 1.568 n y n ruditapes_c26334 -1.627 0.654 2.243 1.378 n y n ruditapes_c26738 -1.668 0.654 hypothetical protein BRAFLDRAFT_125783 [Branchiostoma floridae] 2.054 1.232 n y n ruditapes_c17309 -1.736 0.654 1.805 1.04 n y n ruditapes_c22068 2.248 0.654 vinculin "/// 0007016 // cytoskeletal anchoring at plasma membrane /// 0005198 // structural molecule activity /// 0005925 // focal adhesion /// 0015629 // actin cytoskeleton /// 0003779 // actin binding /// 0006911 // phagocytosis, engulfment /// 0005737 // cytoplasm /// 0007155 // cell adhesion" 0.412 0.927 n y n ruditapes_c25687 2.338 0.654 0.368 0.861 n y n ruditapes_c7244 -1.827 0.654 1.553 0.85 n y n ruditapes_c21863 ? 0.654 glutamate kainate 3 /// 0044425 // membrane part /// 0030424 // axon /// 0007268 // synaptic transmission /// 0005886 // plasma membrane /// 0004970 // ionotropic glutamate receptor activity /// 0050794 // regulation of cellular process /// 0044463 // cell projection part /// 0030425 // dendrite 0 0.201 n y n ruditapes_c21873 ? 0.654 0 0.201 n y n ruditapes_c3886 ? 0.654 0 0.201 n y n ruditapes_c3975 ? 0.654 0 0.201 n y n ruditapes_lrc11743 ? 0.654 0 0.201 n y n ruditapes_lrc33479 ? 0.654 transgelin 3 0 0.201 n y n ruditapes_c20031 -3.336 0.654 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex 0.539 0.162 n y n ruditapes_lrc36299 -4.448 0.654 0.411 0.092 n y n ruditapes2_lrc4775 -5.559 0.654 0.354 0.064 n y n ruditapes_c17022 -6.671 0.654 0.321 0.048 n y n ruditapes_c7972 -6.671 0.654 0.321 0.048 n y n ruditapes_c11195 -? 0.654 0.201 0 n y n ruditapes_c14560 -? 0.654 0.201 0 n y n ruditapes_c6962 -1.072 0.655 loc446264 protein 105.363 98.301 n n n ruditapes_c3514 1.137 0.655 20.589 23.407 n n n ruditapes2_lrc4157 -1.261 0.655 DEC-3 [Lymnaea stagnalis] 8.848 7.015 n n n ruditapes2_lrc5749 1.349 0.655 3.691 4.979 n n n ruditapes2_c357 -1.369 0.655 4.967 3.627 n n n ruditapes_c13643 -1.453 0.655 3.586 2.468 n n n ruditapes_c20473 1.614 0.655 1.35 2.178 n y n ruditapes_c27227 -1.631 0.655 2.209 1.354 n y n ruditapes_c17879 -1.718 0.655 1.847 1.075 n y n ruditapes_c31884 2.878 0.655 ubiquitin carboxyl-terminal hydrolase 0.218 0.626 n y n ruditapes_c19941 -2.093 0.655 1.102 0.526 n y n ruditapes_c24697 -2.224 0.655 0.972 0.437 n y n ruditapes_c10332 ? 0.655 0 0.2 n y n ruditapes_c16890 ? 0.655 0 0.2 n y n ruditapes_c17041 ? 0.655 0 0.2 n y n ruditapes_c21861 ? 0.655 0 0.2 n y n ruditapes2_c485 ? 0.655 0 0.199 n y n ruditapes_c16780 ? 0.655 0 0.199 n y n ruditapes_c9556 -3.892 0.655 0.457 0.117 n y n ruditapes_c9243 -6.671 0.655 0.32 0.048 n y n ruditapes_c17083 -8.895 0.655 0.283 0.032 n y n ruditapes_c18740 -? 0.655 0.2 0 n y n ruditapes_c24512 -? 0.655 0.2 0 n y n ruditapes_c14881 -1.187 0.656 15.965 13.447 n n n ruditapes2_c1567 -1.234 0.656 10.667 8.642 n n n ruditapes_c8225 -1.38 0.656 hsbp1-like protein /// 0006950 // response to stress 4.715 3.418 n n n ruditapes_c25123 1.761 0.656 0.926 1.631 n y n ruditapes_c25869 1.799 0.656 0.852 1.533 n y n ruditapes_c7046 1.849 0.656 0.767 1.418 n y n ruditapes_c10174 1.927 0.656 0.664 1.281 n y n ruditapes2_c749 2.024 0.656 pancreatic triacylglycerol lipase 0.562 1.137 n y n ruditapes2_c3055 -1.696 0.656 1.925 1.136 n y n ruditapes_c6411 2.441 0.656 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 0.325 0.794 n y n ruditapes_c6449 -1.927 0.656 1.329 0.69 n y n ruditapes_lrc27733 2.923 0.656 beta tubulin 0.208 0.608 n y n ruditapes_lrc19243 -2.076 0.656 1.114 0.537 n y n ruditapes_c25669 -2.085 0.656 abnormal dauer formation family member (daf-36) /// 0035264 // multicellular organism growth /// 0045456 // ecdysteroid biosynthetic process /// 0002168 // instar larval development /// 0007552 // metamorphosis 1.1 0.528 n y n ruditapes_lrc38918 3.373 0.656 nadh-ubiquinone oxidoreductase subunit (complex i- ) (ci- ) (gene associated with retinoic-interferon-induced mortality 19 protein) (grim-19) (cell death-regulatory protein grim-19) isoform 1 0.153 0.515 n y n ruditapes_c25286 -2.224 0.656 0.966 0.434 n y n ruditapes_c18090 -2.224 0.656 0.965 0.434 n y n ruditapes_c13538 -2.224 0.656 pol polyprotein 0.964 0.433 n y n ruditapes_s37330 -2.594 0.656 0.738 0.284 n y n ruditapes_c11182 -2.965 0.656 0.609 0.205 n y n ruditapes2_c2870 ? 0.656 0 0.198 n y n ruditapes_c2732 ? 0.656 countin-like protein 0 0.198 n y n ruditapes_c31390 ? 0.656 0 0.198 n y n ruditapes_c25129 -4.448 0.656 0.408 0.092 n y n ruditapes_c6381 -6.671 0.656 0.316 0.047 n y n ruditapes_c31857 -11.119 0.656 0.261 0.023 n y n ruditapes_c13458 -? 0.656 0.199 0 n y n ruditapes_c22746 1.2 0.657 10.041 12.052 n n n ruditapes2_c1549 -1.32 0.657 6.19 4.69 n n n ruditapes_c4742 -1.471 0.657 3.345 2.275 n n n ruditapes_c22776 -1.483 0.657 3.224 2.175 n n n ruditapes2_c2107 -1.488 0.657 ribosomal rna processing 7 homolog a ( cerevisiae) /// 0044424 // intracellular part 3.169 2.13 n n n ruditapes2_c1616 -1.518 0.657 adenylate cyclase-associated protein 1 /// 0042981 // regulation of apoptosis /// 0005515 // protein binding /// 0008152 // metabolic process /// 0000902 // cell morphogenesis /// 0008078 // mesodermal cell migration 2.903 1.912 n y n ruditapes_c25209 -1.557 0.657 2.615 1.68 n y n ruditapes_c23256 -1.561 0.657 2.578 1.651 n y n ruditapes_c7261 -1.588 0.657 breakpoint cluster region protein (renal carcinoma antigen ny-ren-26) /// 0007242 // intracellular signaling cascade /// 0005096 // GTPase activator activity /// 0051726 // regulation of cell cycle /// 0005515 // protein binding /// 0004674 // protein serine/threonine kinase activity /// 0005737 // cytoplasm /// 0007420 // brain development /// 0005085 // guanyl-nucleotide exchange factor activity /// 0048008 // platelet-derived growth factor receptor signaling pathway /// 0046777 // protein amino acid autophosphorylation 2.407 1.515 n y n ruditapes2_c102 -1.588 0.657 mitogen-activated protein-binding protein-interacting protein /// 0005515 // protein binding /// 0031902 // late endosome membrane /// 0000186 // activation of MAPKK activity /// 0005765 // lysosomal membrane 2.406 1.515 n y n ruditapes_c35081 -1.588 0.657 2.406 1.514 n y n ruditapes_c15188 2.01 0.657 nucleolin protein 0.573 1.152 n y n ruditapes_c20040 -1.73 0.657 1.794 1.037 n y n ruditapes2_c2082 -2.022 0.657 1.176 0.582 n y n ruditapes_c22179 ? 0.657 0 0.198 n y n ruditapes2_c2846 ? 0.657 0 0.197 n y n ruditapes_c2373 ? 0.657 0 0.197 n y n ruditapes_c27801 ? 0.657 0 0.197 n y n ruditapes_c7150 ? 0.657 tyrosine kinase partial /// 0005488 // binding 0 0.197 n y n ruditapes_c9629 -3.113 0.657 0.572 0.184 n y n ruditapes2_lrc1630 -3.336 0.657 0.527 0.158 n y n ruditapes_c31943 -6.671 0.657 0.314 0.047 n y n ruditapes_c19783 -7.783 0.657 limbic system-associated membrane protein 0.295 0.038 n y n ruditapes_c16482 -13.343 0.657 0.248 0.019 n y n ruditapes_c26435 -? 0.657 0.198 0 n y n ruditapes_c2196 -1.103 0.658 49.478 44.857 n n n ruditapes_c1548 -1.158 0.658 21.624 18.676 n n n ruditapes_c7274 -1.306 0.658 6.642 5.085 n n n ruditapes2_lrc7638 -1.359 0.658 5.103 3.755 n n n ruditapes_c9887 -1.418 0.658 3.989 2.813 n n n ruditapes_c30480 1.538 0.658 1.666 2.562 n y n ruditapes_c19147 1.561 0.658 1.549 2.417 n y n ruditapes_c26735 -1.491 0.658 3.118 2.091 n n n ruditapes_c17115 -1.495 0.658 3.095 2.071 n n n ruditapes_s38297 1.658 0.658 1.173 1.946 n y n ruditapes_c24275 -1.568 0.658 2.522 1.609 n y n ruditapes_c23628 -1.612 0.658 2.27 1.408 n y n ruditapes_lrc19897 -1.668 0.658 2.001 1.2 n y n ruditapes_c13509 2.184 0.658 cg32721 cg32721-pa /// 0017053 // transcriptional repressor complex /// 0003729 // mRNA binding 0.439 0.96 n y n ruditapes_c18123 -1.779 0.658 innexin family protein /// 0005911 // cell-cell junction 1.637 0.92 n y n ruditapes2_c1659 2.248 0.658 0.402 0.904 n y n ruditapes_c29097 2.518 0.658 0.295 0.744 n y n ruditapes_c15335 -1.946 0.658 1.278 0.657 n y n ruditapes_c18816 -2.065 0.658 vsgp f-spondin 1.113 0.539 n y n ruditapes_c5622 -2.224 0.658 0.951 0.428 n y n ruditapes_s33925 4.497 0.658 0.087 0.393 n y n ruditapes_c24101 -2.594 0.658 0.728 0.28 n y n ruditapes_c31981 -2.859 0.658 0.632 0.221 n y n ruditapes_c26198 ? 0.658 0 0.197 n y n ruditapes2_c480 ? 0.658 lysozyme 0 0.196 n y n ruditapes_c24043 ? 0.658 0 0.196 n y n ruditapes_c24960 ? 0.658 0 0.196 n y n ruditapes_c28764 ? 0.658 0 0.196 n y n ruditapes_c30844 ? 0.658 0 0.196 n y n ruditapes_lrc36574 -3.113 0.658 0.569 0.183 n y n ruditapes_c22892 -3.336 0.658 0.523 0.157 n y n ruditapes_lrc36450 -8.895 0.658 ependymin related protein-1 precursor 0.278 0.031 n y n ruditapes_c6427 -? 0.658 0.196 0 n y n ruditapes_lrc34700 1.064 0.659 ribosomal protein s5 /// 0006414 // translational elongation /// 0006413 // translational initiation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 79.98 85.097 n n n ruditapes_c14967 1.143 0.659 18.498 21.141 n n n ruditapes_c16063 1.209 0.659 stranded at isoform a 9.177 11.096 n n n ruditapes_c12216 -1.286 0.659 7.392 5.749 n n n ruditapes2_c2161 -1.346 0.659 proteasome ( macropain) alpha 5 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 5.35 3.974 n n n ruditapes_c13305 -1.382 0.659 4.582 3.315 n n n ruditapes_c13896 -1.419 0.659 3.959 2.79 n n n ruditapes_c13122 -1.45 0.659 3.544 2.443 n n n ruditapes_c12885 -1.554 0.659 2.604 1.676 n y n ruditapes_c19687 -1.597 0.659 2.334 1.462 n y n ruditapes_c5128 -1.617 0.659 2.229 1.378 n y n ruditapes2_c1813 -1.636 0.659 2.131 1.302 n y n ruditapes_c18150 -1.779 0.659 1.62 0.911 n y n ruditapes_lrc33203 -2.085 0.659 gm2 activator protein 1.081 0.519 n y n ruditapes_c31097 3.597 0.659 0.132 0.475 n y n ruditapes_c19813 -2.224 0.659 dead deah box helicase domain protein 0.949 0.427 n y n ruditapes_c14919 -2.395 0.659 0.823 0.344 n y n ruditapes_c20181 -2.502 0.659 0.767 0.307 n y n ruditapes2_c2576 ? 0.659 0 0.195 n y n ruditapes_c23695 ? 0.659 0 0.195 n y n ruditapes_c20492 ? 0.659 0 0.194 n y n ruditapes_c23367 ? 0.659 0 0.194 n y n ruditapes_c24858 ? 0.659 0 0.194 n y n ruditapes_c16075 -3.113 0.659 0.564 0.181 n y n ruditapes_c34063 -3.336 0.659 0.519 0.156 n y n ruditapes_c27216 -6.671 0.659 0.311 0.047 n y n ruditapes_s35222 -6.671 0.659 0.311 0.047 n y n ruditapes_c24370 -? 0.659 0.195 0 n y n ruditapes_c15693 -? 0.659 0.194 0 n y n ruditapes_c63 1.139 0.66 cat eye syndrome chromosome candidate 5 homolog 19.294 21.98 n n n ruditapes_c33134 1.265 0.66 5.894 7.457 n n n ruditapes_c12942 -1.396 0.66 4.294 3.076 n n n ruditapes_s37029 1.52 0.66 ribosomal protein l14 1.743 2.65 n y n ruditapes_c21246 -1.461 0.66 3.393 2.322 n n n ruditapes_c25704 1.599 0.66 1.364 2.181 n y n ruditapes_c14216 -1.483 0.66 3.161 2.132 n n n ruditapes2_lrc5802 1.619 0.66 1.291 2.09 n y n ruditapes_c6571 -1.497 0.66 3.03 2.024 n n n ruditapes_c8312 -1.523 0.66 member ras oncogene family-like 5 /// 0000166 // nucleotide binding 2.8 1.838 n y n ruditapes_c9454 -1.526 0.66 2.773 1.817 n y n ruditapes_c707 -1.636 0.66 2.116 1.293 n y n ruditapes_c23381 2.099 0.66 ribokinase /// 0005975 // carbohydrate metabolic process /// 0016301 // kinase activity 0.489 1.025 n y n ruditapes_c10690 -1.906 0.66 1.33 0.698 n y n ruditapes_c10744 -2.224 0.66 0.941 0.423 n y n ruditapes_c38928 4.497 0.66 peptidoglycan-recognition protein precursor /// 0042742 // defense response to bacterium /// 0008745 // N-acetylmuramoyl-L-alanine amidase activity 0.086 0.388 n y n ruditapes_c18445 -2.502 0.66 mastigoneme-like protein 0.76 0.304 n y n ruditapes_c5977 7.195 0.66 0.041 0.297 n y n ruditapes_c10331 ? 0.66 0 0.194 n y n ruditapes_c26579 -6.671 0.66 0.308 0.046 n y n ruditapes_c7138 -11.119 0.66 si:rp71- protein 0.255 0.023 n y n ruditapes_c11463 -? 0.66 0.193 0 n y n ruditapes_c19077 -? 0.66 0.193 0 n y n ruditapes2_c1404 -1.041 0.661 ubiquitin (ribosomal protein l40) /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0019082 // viral protein processing /// 0005840 // ribosome /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0004252 // serine-type endopeptidase activity /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction 356.738 342.787 n n n ruditapes_c4959 1.155 0.661 15.694 18.134 n n n ruditapes_c12428 -1.211 0.661 adenylate kinase 7 /// 0016740 // transferase activity 12.385 10.224 n n n ruditapes_c11212 -1.454 0.661 3.44 2.366 n n n ruditapes_c10112 -1.543 0.661 2.645 1.714 n y n ruditapes2_c1159 -1.585 0.661 2.364 1.491 n y n ruditapes2_c1001 -1.606 0.661 brain protein i3 2.253 1.403 n y n ruditapes_c22474 -2.076 0.661 1.082 0.522 n y n ruditapes_c7367 -2.669 0.661 aspartate dehydrogenase /// 0019362 // pyridine nucleotide metabolic process /// 0003824 // catalytic activity 0.686 0.257 n y n ruditapes_c19703 ? 0.661 0 0.193 n y n ruditapes_c26283 ? 0.661 0 0.193 n y n ruditapes_c29568 ? 0.661 0 0.193 n y n ruditapes_c15835 ? 0.661 0 0.192 n y n ruditapes_c16095 ? 0.661 hypothetical protein BRAFLDRAFT_92388 [Branchiostoma floridae] 0 0.192 n y n ruditapes_c22992 ? 0.661 0 0.192 n y n ruditapes_c29146 ? 0.661 0 0.192 n y n ruditapes_c5897 ? 0.661 0 0.192 n y n ruditapes_s40455 ? 0.661 fkbp_canga ame: full=fk506-binding protein 1 short=fkbp ame: full=peptidyl-prolyl cis-trans isomerase short=ppiase ame: full=rapamycin-binding protein /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0043284 // biopolymer biosynthetic process /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0 0.192 n y n ruditapes_c14693 -3.113 0.661 0.558 0.179 n y n ruditapes_c27489 -? 0.661 0.193 0 n y n ruditapes_c25987 -? 0.661 0.192 0 n y n ruditapes_c29708 -? 0.661 0.192 0 n y n ruditapes_lrc22268 1.162 0.662 ribosomal protein s10 /// 0005840 // ribosome 14.319 16.643 n n n ruditapes_c27954 -1.228 0.662 10.683 8.697 n n n ruditapes_c11756 -1.288 0.662 7.156 5.556 n n n ruditapes2_lrc5681 -1.294 0.662 ribosomal protein l7a 6.944 5.368 n n n ruditapes2_lrc5387 -1.326 0.662 ribosomal protein l32 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 5.821 4.388 n n n ruditapes_c26804 -1.363 0.662 suppressor of cytokine signaling 2 4.874 3.574 n n n ruditapes_c26879 1.445 0.662 2.275 3.288 n n n ruditapes_c14440 -1.437 0.662 3.632 2.528 n n n ruditapes_c26532 -1.442 0.662 3.574 2.478 n n n ruditapes_lrc35589 1.666 0.662 1.118 1.864 n y n ruditapes_c18875 -1.526 0.662 2.739 1.795 n y n ruditapes_c3402 -1.577 0.662 2.397 1.52 n y n ruditapes_lrc19469 -1.819 0.662 protein 1.494 0.821 n y n ruditapes_c28402 -1.906 0.662 1.315 0.69 n y n ruditapes_s37250 2.698 0.662 ribosomal protein s7 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0006364 // rRNA processing /// 0022627 // cytosolic small ribosomal subunit 0.242 0.653 n y n ruditapes2_c1785 -1.967 0.662 cg7224- isoform a 1.215 0.618 n y n ruditapes_c26914 -1.977 0.662 1.198 0.606 n y n ruditapes_c29788 -2.224 0.662 0.928 0.417 n y n ruditapes_c12810 ? 0.662 0 0.192 n y n ruditapes_c28675 ? 0.662 0 0.192 n y n ruditapes_c6943 ? 0.662 0 0.192 n y n ruditapes_s38771 ? 0.662 0 0.192 n y n ruditapes2_c1064 ? 0.662 transcription elongation factor b polypeptide 3 binding protein 1 isoform 1 /// 0016787 // hydrolase activity /// 0005622 // intracellular 0 0.191 n y n ruditapes_c18078 ? 0.662 0 0.191 n y n ruditapes_c26937 -3.706 0.662 0.459 0.124 n y n ruditapes_c8576 -6.671 0.662 0.306 0.046 n y n ruditapes_lrc34633 -8.895 0.662 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0.271 0.03 n y n ruditapes_c28896 -? 0.662 ectonucleotide pyrophosphatase phosphodiesterase 5 /// 0003824 // catalytic activity 0.191 0 n y n ruditapes_lrc15748 -? 0.662 cysteine-rich protein 1 0.191 0 n y n ruditapes_c10860 -1.159 0.663 20.628 17.794 n n n ruditapes2_c2197 -1.275 0.663 ras-related c3 botulinum toxin substrate 3 (rho small gtp binding protein rac3) "/// 0045893 // positive regulation of transcription, DNA-dependent /// 0030334 // regulation of cell migration /// 0030027 // lamellipodium /// 0060263 // regulation of respiratory burst /// 0035025 // positive regulation of Rho protein signal transduction /// 0047485 // protein N-terminus binding /// 0005624 // membrane fraction /// 0031529 // ruffle organization /// 0008283 // cell proliferation /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0021831 // embryonic olfactory bulb interneuron precursor migration /// 0006972 // hyperosmotic response /// 0048261 // negative regulation of receptor-mediated endocytosis /// 0051668 // localization within membrane /// 0030521 // androgen receptor signaling pathway /// 0019897 // extrinsic to plasma membrane /// 0006935 // chemotaxis /// 0005525 // GTP binding /// 0046966 // thyroid hormone receptor binding /// 0043005 // neuron projection /// 0003924 // GTPase activity /// 0045740 // positive regulation of DNA replication /// 0021799 // cerebral cortex radially oriented cell migration /// 0003677 // DNA binding /// 0010310 // regulation of hydrogen peroxide metabolic process /// 0043552 // positive regulation of phosphoinositide 3-kinase activity /// 0043025 // cell soma /// 0042470 // melanosome /// 0030838 // positive regulation of actin filament polymerization /// 0012505 // endomembrane system /// 0006954 // inflammatory response /// 0031941 // filamentous actin /// 0004402 // histone acetyltransferase activity /// 0005829 // cytosol /// 0050681 // androgen receptor binding /// 0030742 // GTP-dependent protein binding /// 0030032 // lamellipodium assembly /// 0050885 // neuromuscular process controlling balance /// 0045453 // bone resorption /// 0007155 // cell adhesion /// 0007411 // axon guidance /// 0016358 // dendrite development /// 0030426 // growth cone /// 0019899 // enzyme binding /// 0004872 // receptor activity /// 0016601 // Rac protein signal transduction" 7.688 6.03 n n n ruditapes_c3417 1.366 0.663 3.221 4.4 n n n ruditapes_c19456 -1.47 0.663 3.237 2.202 n n n ruditapes_c31007 -1.543 0.663 2.603 1.687 n y n ruditapes_lrc23286 1.991 0.663 0.569 1.133 n y n ruditapes_c21144 -1.687 0.663 1.871 1.109 n y n ruditapes_c14583 -1.711 0.663 1.784 1.043 n y n ruditapes_c8178 -1.723 0.663 1.743 1.011 n y n ruditapes_c21915 -1.819 0.663 calpain b isoform 2 1.481 0.814 n y n ruditapes_c25303 -1.946 0.663 bcl2-associated x protein "/// 0033599 // regulation of mammary gland epithelial cell proliferation /// 0060037 // pharyngeal system development /// 0006927 // transformed cell apoptosis /// 0035260 // internal genitalia morphogenesis /// 0016563 // transcription activator activity /// 0006355 // regulation of transcription, DNA-dependent /// 0044445 // cytosolic part /// 0005757 // mitochondrial permeability transition pore complex /// 0048754 // branching morphogenesis of a tube /// 0003700 // transcription factor activity /// 0051087 // chaperone binding /// 0002262 // myeloid cell homeostasis /// 0031072 // heat shock protein binding /// 0010332 // response to gamma radiation /// 0035108 // limb morphogenesis /// 0001777 // T cell homeostatic proliferation /// 0060058 // positive regulation of apoptosis involved in mammary gland involution /// 0019987 // negative regulation of anti-apoptosis /// 0008629 // induction of apoptosis by intracellular signals /// 0021854 // hypothalamus development /// 0006974 // response to DNA damage stimulus /// 0030264 // nuclear fragmentation during apoptosis /// 0048597 // post-embryonic camera-type eye morphogenesis /// 0051434 // BH3 domain binding /// 0007281 // germ cell development /// 0035234 // germ cell programmed cell death /// 0006309 // DNA fragmentation involved in apoptosis /// 0051260 // protein homooligomerization /// 0042493 // response to drug /// 0043497 // regulation of protein heterodimerization activity /// 0007431 // salivary gland development /// 0005634 // nucleus /// 0005789 // endoplasmic reticulum membrane /// 0001541 // ovarian follicle development /// 0046688 // response to copper ion /// 0008634 // negative regulation of survival gene product expression /// 0051726 // regulation of cell cycle /// 0043525 // positive regulation of neuron apoptosis /// 0050680 // negative regulation of epithelial cell proliferation /// 0002358 // B cell homeostatic proliferation /// 0048678 // response to axon injury /// 0032976 // release of matrix enzymes from mitochondria /// 0002352 // B cell negative selection /// 0001764 // neuron migration /// 0001844 // protein insertion into mitochondrial membrane during induction of apoptosis /// 0001822 // kidney development /// 0046982 // protein heterodimerization activity /// 0030850 // prostate gland development /// 0005625 // soluble fraction /// 0010248 // establishment or maintenance of transmembrane electrochemical gradient /// 0001101 // response to acid /// 0006922 // cleavage of lamin /// 0048515 // spermatid differentiation /// 0006687 // glycosphingolipid metabolic process /// 0042475 // odontogenesis of dentine-containing tooth /// 0043653 // mitochondrial fragmentation during apoptosis /// 0002904 // positive regulation of B cell apoptosis /// 0060041 // retina development in camera-type eye /// 0070059 // apoptosis in response to endoplasmic reticulum stress /// 0034644 // cellular response to UV /// 0009636 // response to toxin /// 0001756 // somitogenesis /// 0048147 // negative regulation of fibroblast proliferation /// 0060011 // Sertoli cell proliferation /// 0043496 // regulation of protein homodimerization activity /// 0045333 // cellular respiration /// 0001974 // blood vessel remodeling /// 0001836 // release of cytochrome c from mitochondria /// 0051281 // positive regulation of release of sequestered calcium ion into cytosol /// 0008635 // activation of caspase activity by cytochrome c /// 0042220 // response to cocaine /// 0045136 // development of secondary sexual characteristics /// 0043524 // negative regulation of neuron apoptosis /// 0032471 // reduction of endoplasmic reticulum calcium ion concentration /// 0046674 // induction of retinal programmed cell death /// 0046902 // regulation of mitochondrial membrane permeability /// 0009566 // fertilization /// 0060068 // vagina development /// 0048873 // homeostasis of number of cells within a tissue /// 0008053 // mitochondrial fusion /// 0008134 // transcription factor binding /// 0007507 // heart development /// 0031558 // induction of apoptosis in response to chemical stimulus /// 0009651 // response to salt stress /// 0051881 // regulation of mitochondrial membrane potential /// 0008289 // lipid binding /// 0007007 // inner mitochondrial membrane organization /// 0007008 // outer mitochondrial membrane organization /// 0005741 // mitochondrial outer membrane /// 0001782 // B cell homeostasis /// 0021987 // cerebral cortex development /// 0051412 // response to corticosterone stimulus /// 0048087 // positive regulation of pigmentation during development /// 0042803 // protein homodimerization activity /// 0033137 // negative regulation of peptidyl-serine phosphorylation /// 0006808 // regulation of nitrogen utilization" 1.243 0.639 n y n ruditapes_c21616 -2.065 0.663 1.079 0.523 n y n ruditapes_c28832 -2.224 0.663 0.922 0.415 n y n ruditapes_c15497 -2.471 0.663 0.764 0.309 n y n ruditapes_c28652 -2.78 0.663 0.637 0.229 n y n ruditapes2_c3765 ? 0.663 0 0.19 n y n ruditapes_c10198 ? 0.663 predicted protein [Nematostella vectensis] 0 0.19 n y n ruditapes_c24876 ? 0.663 0 0.19 n y n ruditapes_c30994 ? 0.663 0 0.19 n y n ruditapes_lrc36968 ? 0.663 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0 0.19 n y n ruditapes_c14237 -5.559 0.663 0.334 0.06 n y n ruditapes2_lrc5352 -6.671 0.663 0.304 0.046 n y n ruditapes_c16451 -? 0.663 0.19 0 n y n ruditapes_c27434 -? 0.663 0.19 0 n y n ruditapes_c12607 -1.255 0.664 8.736 6.962 n n n ruditapes_c22585 -1.328 0.664 5.686 4.282 n n n ruditapes2_c414 -1.352 0.664 hypothetical protein BRAFLDRAFT_125616 [Branchiostoma floridae] 5.081 3.759 n n n ruditapes2_c420 -1.364 0.664 ubiquinone biosynthesis protein coq7 homolog 4.816 3.531 n n n ruditapes_lrc38728 -1.668 0.664 1.93 1.157 n y n ruditapes_lrc10233 2.136 0.664 40s ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0051536 // iron-sulfur cluster binding 0.451 0.964 n y n ruditapes_c26423 -1.76 0.664 mgc97855 protein 1.619 0.92 n y n ruditapes_c13040 2.323 0.664 0.353 0.82 n y n ruditapes_c21619 -1.819 0.664 1.469 0.807 n y n ruditapes_c29993 -1.946 0.664 1.231 0.633 n y n ruditapes_lrc32140 2.788 0.664 0.222 0.618 n y n ruditapes_c25077 4.047 0.664 0.102 0.413 n y n ruditapes_c7607 -2.224 0.664 0.915 0.412 n y n ruditapes_c30281 -2.224 0.664 0.915 0.411 n y n ruditapes_lrc36098 4.947 0.664 0.071 0.353 n y n ruditapes_c20047 -2.502 0.664 sirtuin 2 0.741 0.296 n y n ruditapes_c24933 -2.78 0.664 0.633 0.228 n y n ruditapes_c20910 ? 0.664 0 0.189 n y n ruditapes_c21429 ? 0.664 0 0.189 n y n ruditapes_c23323 ? 0.664 0 0.189 n y n ruditapes_c13353 ? 0.664 cub and zona pellucida-like domains 1 /// 0009987 // cellular process /// 0044464 // cell part 0 0.188 n y n ruditapes_c13435 ? 0.664 secreted protein 0 0.188 n y n ruditapes_c18045 ? 0.664 0 0.188 n y n ruditapes_c26755 ? 0.664 inhibitor of apoptosis isoform a /// 0050829 // defense response to Gram-negative bacterium /// 0005488 // binding /// 0006916 // anti-apoptosis /// 0043234 // protein complex /// 0019730 // antimicrobial humoral response /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0044424 // intracellular part /// 0007423 // sensory organ development 0 0.188 n y n ruditapes_c31193 ? 0.664 0 0.188 n y n ruditapes_c23815 -3.113 0.664 0.548 0.176 n y n ruditapes2_lrc3995 -3.706 0.664 xotch protein - african clawed frog 0.453 0.122 n y n ruditapes_c28959 -3.892 0.664 tyrosine kinase receptor /// 0016740 // transferase activity 0.432 0.111 n y n ruditapes_lrc29982 -4.448 0.664 0.388 0.087 n y n ruditapes_c25088 -4.448 0.664 0.387 0.087 n y n ruditapes_c20710 -4.448 0.664 0.386 0.087 n y n ruditapes_c23419 -? 0.664 0.189 0 n y n ruditapes_s35617 -? 0.664 0.189 0 n y n ruditapes_c10732 -? 0.664 0.188 0 n y n ruditapes_c22832 1.269 0.665 5.574 7.07 n n n ruditapes_c24249 1.294 0.665 4.748 6.143 n n n ruditapes_c24708 1.349 0.665 3.458 4.665 n n n ruditapes_c19270 1.371 0.665 3.089 4.235 n n n ruditapes_c28686 -1.337 0.665 5.386 4.027 n n n ruditapes_c13994 1.401 0.665 2.691 3.77 n n n ruditapes_c13679 1.494 0.665 PREDICTED: similar to conserved hypothetical protein [Hydra magnipapillata] 1.858 2.775 n n n ruditapes_c17773 1.505 0.665 1.784 2.684 n y n ruditapes_c6020 -1.457 0.665 3.327 2.284 n n n ruditapes_c19951 1.658 0.665 1.122 1.86 n y n ruditapes_c17292 1.686 0.665 1.041 1.756 n y n ruditapes_c479 -1.529 0.665 2.678 1.752 n y n ruditapes_c9829 1.693 0.665 T13C2.5 [Cryptosporidium hominis TU502] 1.027 1.738 n y n ruditapes_c24065 -1.567 0.665 2.421 1.545 n y n ruditapes_c5473 1.991 0.665 cathepsin k /// 0005576 // extracellular region /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0.56 1.116 n y n ruditapes2_c1446 -1.698 0.665 universal stress protein 1.804 1.062 n y n ruditapes_c28327 2.313 0.665 0.355 0.82 n y n ruditapes_c8853 -1.882 0.665 1.335 0.709 n y n ruditapes_c25735 -1.89 0.665 rho gtpase rho1 1.317 0.697 n y n ruditapes_c31750 2.698 0.665 0.238 0.643 n y n ruditapes_c17588 2.698 0.665 0.238 0.641 n y n ruditapes_c17348 -1.946 0.665 fumarylacetoacetate hydrolase domain containing 2a 1.227 0.631 n y n ruditapes_c18683 -2.224 0.665 0.911 0.41 n y n ruditapes_c4173 -2.355 0.665 0.821 0.349 n y n ruditapes_lrc13971 5.396 0.665 0.062 0.332 n y n ruditapes_s34025 -2.541 0.665 0.719 0.283 n y n ruditapes_c15210 -2.669 0.665 0.667 0.25 n y n ruditapes_c28047 -2.859 0.665 0.606 0.212 n y n ruditapes_c29344 ? 0.665 0 0.188 n y n ruditapes_s33840 ? 0.665 ferritin /// 0016491 // oxidoreductase activity /// 0005506 // iron ion binding 0 0.188 n y n ruditapes_c16511 ? 0.665 0 0.187 n y n ruditapes_c20045 ? 0.665 0 0.187 n y n ruditapes_c22114 ? 0.665 dehydrogenase reductase (sdr family) member 10 0 0.187 n y n ruditapes_c23355 ? 0.665 0 0.187 n y n ruditapes_c27134 ? 0.665 0 0.187 n y n ruditapes_c5405 -3.113 0.665 0.543 0.175 n y n ruditapes_c12003 -3.336 0.665 0.501 0.15 n y n ruditapes_c14131 -3.336 0.665 0.501 0.15 n y n ruditapes_c29964 -5.559 0.665 0.331 0.059 n y n ruditapes_c25557 -11.119 0.665 0.248 0.022 n y n ruditapes2_c1703 -13.343 0.665 0.236 0.018 n y n ruditapes_c23048 -? 0.665 0.188 0 n y n ruditapes_c25518 -? 0.665 0.188 0 n y n ruditapes_c29683 -? 0.665 0.188 0 n y n ruditapes_c31019 -1.283 0.666 7.191 5.605 n n n ruditapes_c28283 1.381 0.666 2.939 4.06 n n n ruditapes_c26518 -1.423 0.666 3.726 2.618 n n n ruditapes_c27576 -1.471 0.666 3.157 2.147 n n n ruditapes_c9861 1.911 0.666 delta isoform of regulatory subunit protein phosphatase 2a /// 0007399 // nervous system development /// 0005634 // nucleus /// 0005515 // protein binding /// 0000159 // protein phosphatase type 2A complex /// 0005737 // cytoplasm /// 0008601 // protein phosphatase type 2A regulator activity /// 0007165 // signal transduction 0.641 1.224 n y n ruditapes_c14312 -1.654 0.666 calmodulin-like 3 1.968 1.19 n y n ruditapes2_c1956 -1.692 0.666 1.816 1.073 n y n ruditapes_lrc39803 -1.807 0.666 ribosomal protein s3 1.488 0.824 n y n ruditapes_c13566 -1.89 0.666 calcium regulated heat stable protein 24kda 1.312 0.694 n y n ruditapes_c7670 2.698 0.666 type alpha 1 /// 0005488 // binding /// 0005578 // proteinaceous extracellular matrix 0.236 0.638 n y n ruditapes_c26312 -2.059 0.666 1.063 0.516 n y n ruditapes_c31099 -2.224 0.666 0.908 0.408 n y n ruditapes_c17056 -2.471 0.666 0.749 0.303 n y n ruditapes_lrc12626 -2.541 0.666 0.715 0.281 n y n ruditapes_c6917 -2.594 0.666 0.69 0.266 n y n ruditapes_c7489 -2.669 0.666 methyltransferase type 11 0.661 0.248 n y n ruditapes_c20847 ? 0.666 0 0.187 n y n ruditapes_c21472 ? 0.666 0 0.187 n y n ruditapes_c23705 ? 0.666 0 0.187 n y n ruditapes_c19577 ? 0.666 0 0.186 n y n ruditapes_c24018 ? 0.666 0 0.186 n y n ruditapes_c21417 -3.113 0.666 0.54 0.173 n y n ruditapes_lrc38135 -3.336 0.666 sarcoplasmic calcium-binding protein 0.499 0.15 n y n ruditapes_c7642 -3.706 0.666 0.447 0.121 n y n ruditapes_c21128 -3.706 0.666 0.446 0.12 n y n ruditapes_c13631 -4.003 0.666 cytochrome p450 cyp3a70 "/// 0005488 // binding /// 0004497 // monooxygenase activity /// 0008152 // metabolic process /// 0009986 // cell surface /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" 0.417 0.104 n y n ruditapes_c27228 -5.189 0.666 0.342 0.066 n y n ruditapes_c2989 -6.671 0.666 0.297 0.045 n y n ruditapes_c11599 -1.186 0.667 15.019 12.659 n n n ruditapes_c9653 1.197 0.667 9.774 11.696 n n n ruditapes_c16193 -1.25 0.667 8.854 7.083 n n n ruditapes2_c3607 -1.258 0.667 isoform d 8.378 6.658 n n n ruditapes_c11174 1.319 0.667 4.031 5.315 n n n ruditapes_c15732 -1.347 0.667 5.097 3.784 n n n ruditapes_c17860 1.445 0.667 2.2 3.181 n n n ruditapes2_c1038 -1.384 0.667 aldehyde dehydrogenase 1a1 /// 0055114 // oxidation reduction /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0001758 // retinal dehydrogenase activity 4.31 3.114 n n n ruditapes_c3499 1.574 0.667 1.405 2.211 n y n ruditapes_c17458 -1.483 0.667 exocyst complex component 7 /// 0000145 // exocyst /// 0006887 // exocytosis 3.02 2.037 n n n ruditapes_c26238 -1.492 0.667 hypothetical protein BRAFLDRAFT_118671 [Branchiostoma floridae] 2.942 1.972 n n n ruditapes2_c2063 -1.497 0.667 hypothetical protein Shew185_1866 [Shewanella baltica OS185] 2.893 1.933 n n n ruditapes_c7073 -1.529 0.667 x-prolyl aminopeptidase (aminopeptidase p) "/// 0005739 // mitochondrion /// 0046872 // metal ion binding /// 0005634 // nucleus /// 0070011 // peptidase activity, acting on L-amino acid peptides" 2.637 1.725 n y n ruditapes2_lrc5055 1.799 0.667 alpha 3 type vi collagen isoform 1 precursor 0.796 1.431 n y n ruditapes_c9081 1.844 0.667 0.726 1.339 n y n ruditapes_c9163 -1.668 0.667 1.89 1.133 n y n ruditapes_c22895 2.099 0.667 0.469 0.983 n y n ruditapes_c15629 -1.756 0.667 cleavage and polyadenylation specificity 1.607 0.915 n y n ruditapes_c31720 -1.812 0.667 eukaryotic translation initiation factor 1a "/// 0007224 // smoothened signaling pathway /// 0016282 // eukaryotic 43S preinitiation complex /// 0006413 // translational initiation /// 0016491 // oxidoreductase activity /// 0006911 // phagocytosis, engulfment /// 0000022 // mitotic spindle elongation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0003723 // RNA binding" 1.465 0.808 n y n ruditapes_c3613 -1.853 0.667 1.376 0.742 n y n ruditapes_c3933 3.148 0.667 0.165 0.52 n y n ruditapes_c891 -2.83 0.667 0.607 0.215 n y n ruditapes2_c426 -2.83 0.667 serine threonine kinase 25 (ste20 yeast) 0.607 0.214 n y n ruditapes_c6696 -2.859 0.667 domain containing 3 0.596 0.208 n y n ruditapes2_c211 ? 0.667 pyruvate dehydrogenase /// 0005524 // ATP binding /// 0005759 // mitochondrial matrix /// 0007548 // sex differentiation /// 0018106 // peptidyl-histidine phosphorylation /// 0006916 // anti-apoptosis /// 0005886 // plasma membrane /// 0030307 // positive regulation of cell growth /// 0004674 // protein serine/threonine kinase activity /// 0048477 // oogenesis /// 0046620 // regulation of organ growth /// 0000155 // two-component sensor activity /// 0007283 // spermatogenesis /// 0030036 // actin cytoskeleton organization /// 0004740 // pyruvate dehydrogenase (acetyl-transferring) kinase activity /// 0008286 // insulin receptor signaling pathway /// 0006090 // pyruvate metabolic process 0 0.185 n y n ruditapes2_c2455 ? 0.667 0 0.185 n y n ruditapes_c10655 ? 0.667 0 0.185 n y n ruditapes_c15256 ? 0.667 0 0.185 n y n ruditapes_c16339 ? 0.667 ceroid- neuronal 5 /// 0044444 // cytoplasmic part /// 0032501 // multicellular organismal process /// 0043231 // intracellular membrane-bounded organelle /// 0009987 // cellular process 0 0.185 n y n ruditapes_c25051 ? 0.667 nima (never in mitosis gene a)-related kinase 7 /// 0000166 // nucleotide binding /// 0004672 // protein kinase activity 0 0.185 n y n ruditapes_c2608 ? 0.667 0 0.185 n y n ruditapes_c26502 ? 0.667 0 0.185 n y n ruditapes_c31215 ? 0.667 0 0.185 n y n ruditapes_c31569 ? 0.667 0 0.185 n y n ruditapes_c15361 -3.336 0.667 0.494 0.148 n y n ruditapes_lrc34922 -4.003 0.667 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 0.413 0.103 n y n ruditapes_c29945 -6.671 0.667 0.297 0.044 n y n ruditapes_c27224 -6.671 0.667 0.296 0.044 n y n ruditapes_c23470 -? 0.667 0.185 0 n y n ruditapes_c17033 -1.115 0.668 37.404 33.555 n n n ruditapes_c13442 -1.138 0.668 26.227 23.048 n n n ruditapes_lrc22443 -1.161 0.668 19.451 16.749 n n n ruditapes_lrc34376 -1.299 0.668 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 6.475 4.983 n n n ruditapes2_c2303 -1.302 0.668 6.362 4.888 n n n ruditapes2_c2910 1.336 0.668 taurine transporter /// 0006836 // neurotransmitter transport /// 0005328 // neurotransmitter:sodium symporter activity /// 0005887 // integral to plasma membrane 3.64 4.863 n n n ruditapes2_lrc6435 1.349 0.668 3.397 4.583 n n n ruditapes2_c1083 1.405 0.668 2.589 3.638 n n n ruditapes2_c2230 -1.384 0.668 mitochondrial ribosomal protein s9 4.287 3.096 n n n ruditapes_c18657 1.499 0.668 1.791 2.684 n n n ruditapes_c28502 1.508 0.668 1.734 2.614 n y n ruditapes_c18576 -1.43 0.668 3.595 2.515 n n n ruditapes_c13172 -1.45 0.668 3.345 2.306 n n n ruditapes2_c5999 1.66 0.668 mitochondrial 50s ribosomal protein 1.093 1.815 n y n ruditapes2_c5648 1.743 0.668 methionine sulfoxide reductase b3 /// 0055114 // oxidation reduction /// 0008113 // peptide-methionine-(S)-S-oxide reductase activity /// 0000318 // protein-methionine-R-oxide reductase activity /// 0005739 // mitochondrion /// 0005783 // endoplasmic reticulum /// 0008270 // zinc ion binding /// 0030091 // protein repair 0.896 1.561 n y n ruditapes_c4084 -1.578 0.668 2.299 1.457 n y n ruditapes_c17334 1.949 0.668 0.593 1.156 n y n ruditapes_c10214 -1.934 0.668 1.221 0.632 n y n ruditapes2_c539 -2.065 0.668 dbh-like 1 isoform 2 1.045 0.506 n y n ruditapes_c21639 -2.065 0.668 1.043 0.505 n y n ruditapes_c21933 -2.224 0.668 0.895 0.403 n y n ruditapes_c25340 -2.224 0.668 0.894 0.402 n y n ruditapes_c19211 4.497 0.668 0.082 0.369 n y n ruditapes_c18749 -2.502 0.668 0.724 0.289 n y n ruditapes_lrc23006 -2.669 0.668 0.654 0.245 n y n ruditapes2_c4683 -2.78 0.668 0.616 0.221 n y n ruditapes_c12674 ? 0.668 carbamoyl-phosphate synthetase aspartate and dihydroorotase /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0002134 // UTP binding /// 0006936 // muscle contraction /// 0004151 // dihydroorotase activity /// 0007242 // intracellular signaling cascade /// 0030478 // actin cap /// 0006309 // DNA fragmentation involved in apoptosis /// 0005624 // membrane fraction /// 0005654 // nucleoplasm /// 0004070 // aspartate carbamoyltransferase activity /// 0003779 // actin binding /// 0018107 // peptidyl-threonine phosphorylation /// 0003677 // DNA binding /// 0004516 // nicotinate phosphoribosyltransferase activity /// 0016363 // nuclear matrix /// 0006541 // glutamine metabolic process /// 0005829 // cytosol /// 0016597 // amino acid binding /// 0008270 // zinc ion binding /// 0006928 // cell motion /// 0004672 // protein kinase activity /// 0017022 // myosin binding /// 0006221 // pyrimidine nucleotide biosynthetic process /// 0005523 // tropomyosin binding /// 0004537 // caspase-activated deoxyribonuclease activity /// 0006207 // 'de novo' pyrimidine base biosynthetic process /// 0046777 // protein amino acid autophosphorylation /// 0030263 // apoptotic chromosome condensation /// 0004088 // carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity /// 0019899 // enzyme binding 0 0.184 n y n ruditapes_c12915 ? 0.668 heat shock 70kda protein 12a /// 0048514 // blood vessel morphogenesis 0 0.184 n y n ruditapes_c26093 ? 0.668 0 0.184 n y n ruditapes_c4884 ? 0.668 superoxide dismutase /// 0031012 // extracellular matrix /// 0005802 // trans-Golgi network /// 0055114 // oxidation reduction /// 0005507 // copper ion binding /// 0004784 // superoxide dismutase activity /// 0005634 // nucleus /// 0046688 // response to copper ion /// 0005515 // protein binding /// 0006801 // superoxide metabolic process /// 0001666 // response to hypoxia /// 0005615 // extracellular space /// 0008270 // zinc ion binding /// 0016209 // antioxidant activity 0 0.184 n y n ruditapes_s40349 ? 0.668 cyclophilin a /// 0045069 // regulation of viral genome replication /// 0005576 // extracellular region /// 0019059 // initiation of viral infection /// 0005634 // nucleus /// 0019047 // provirus integration /// 0005488 // binding /// 0005829 // cytosol 0 0.184 n y n ruditapes_c14317 ? 0.668 0 0.183 n y n ruditapes_c22535 ? 0.668 0 0.183 n y n ruditapes_s37123 -3.706 0.668 0.443 0.119 n y n ruditapes_c41 -4.448 0.668 0.379 0.085 n y n ruditapes_c22804 -4.448 0.668 0.378 0.085 n y n ruditapes_lrc34779 -4.448 0.668 coiled-coil protein 0.377 0.085 n y n ruditapes_s36463 -4.448 0.668 0.377 0.085 n y n ruditapes2_lrc6169 -? 0.668 0.184 0 n y n ruditapes_c7339 -? 0.668 0.183 0 n y n ruditapes2_c856 1.13 0.669 ribosomal protein l36 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005829 // cytosol 20.65 23.34 n n n ruditapes_c2642 1.293 0.669 4.649 6.01 n n n ruditapes_c3071 -1.308 0.669 6.105 4.667 n n n ruditapes_c17853 -1.378 0.669 4.381 3.18 n n n ruditapes_c21566 1.513 0.669 1.698 2.568 n y n ruditapes_c22066 -1.447 0.669 3.353 2.317 n n n ruditapes_c19586 -1.483 0.669 2.983 2.012 n n n ruditapes2_c1495 -1.491 0.669 2.905 1.948 n n n ruditapes2_c3333 1.641 0.669 mago-nashi proliferation-associated "/// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0051028 // mRNA transport /// 0008104 // protein localization /// 0003723 // RNA binding /// 0008103 // oocyte microtubule cytoskeleton polarization /// 0000398 // nuclear mRNA splicing, via spliceosome" 1.141 1.873 n y n ruditapes_c10994 -1.629 0.669 mitochondrial 28s ribosomal protein s25 2.039 1.252 n y n ruditapes_c11019 -1.668 0.669 serine peptidase kazal type 3 1.871 1.122 n y n ruditapes2_c3088 2.003 0.669 0.535 1.071 n y n ruditapes2_c5069 -1.76 0.669 hypothetical protein BRAFLDRAFT_277105 [Branchiostoma floridae] 1.574 0.894 n y n ruditapes2_lrc4388 2.248 0.669 metallothionein /// 0046872 // metal ion binding 0.374 0.841 n y n ruditapes_c12635 2.361 0.669 3-hydroxyacyl-coa dehyrogenase 0.326 0.771 n y n ruditapes2_c4436 2.428 0.669 0.302 0.734 n y n ruditapes_c26639 3.597 0.669 0.123 0.444 n y n ruditapes_c18518 -2.224 0.669 0.888 0.399 n y n ruditapes_c23385 -2.224 0.669 0.888 0.399 n y n ruditapes_c15186 4.497 0.669 0.081 0.366 n y n ruditapes_c9868 -2.409 0.669 gf20795 0.768 0.319 n y n ruditapes_c7168 -2.471 0.669 dysferlin isoform 1 /// 0030315 // T-tubule /// 0006936 // muscle contraction /// 0001778 // plasma membrane repair /// 0005515 // protein binding 0.732 0.296 n y n ruditapes2_c2003 -2.7 0.669 0.637 0.236 n y n ruditapes_c11764 ? 0.669 YGSC-1 [Lymnaea stagnalis] 0 0.183 n y n ruditapes_c12131 ? 0.669 0 0.183 n y n ruditapes_c12603 ? 0.669 0 0.183 n y n ruditapes_c15142 ? 0.669 0 0.183 n y n ruditapes_c15330 ? 0.669 0 0.183 n y n ruditapes_c19990 ? 0.669 0 0.183 n y n ruditapes_c21796 ? 0.669 0 0.183 n y n ruditapes2_c1669 ? 0.669 chitin binding peritrophin- 0 0.182 n y n ruditapes_c15171 ? 0.669 0 0.182 n y n ruditapes_c19070 ? 0.669 0 0.182 n y n ruditapes_c29764 ? 0.669 ganglioside gm2 activator precursor 0 0.182 n y n ruditapes_c7835 ? 0.669 0 0.182 n y n ruditapes_s36884 -3.706 0.669 calcium binding protein 2 0.439 0.118 n y n ruditapes2_c6657 -6.671 0.669 0.293 0.044 n y n ruditapes_c19696 -? 0.669 0.183 0 n y n ruditapes_c7890 -? 0.669 0.183 0 n y n ruditapes_c24405 -? 0.669 0.182 0 n y n ruditapes2_c3004 -1.286 0.67 6.888 5.355 n n n ruditapes_c31100 -1.286 0.67 6.848 5.323 n n n ruditapes_c29798 1.357 0.67 actin-related protein 2 3 complex subunit 5 "/// 0030027 // lamellipodium /// 0006911 // phagocytosis, engulfment" 3.232 4.384 n n n ruditapes_c12692 -1.512 0.67 2.722 1.8 n y n ruditapes_c21563 1.855 0.67 0.694 1.288 n y n ruditapes_c11501 -1.635 0.67 1.997 1.222 n y n ruditapes_c20870 -1.668 0.67 1.856 1.113 n y n ruditapes_c27675 -1.668 0.67 1.856 1.113 n y n ruditapes_lrc11081 -1.685 0.67 1.792 1.064 n y n ruditapes_c16777 -1.694 0.67 1.768 1.044 n y n ruditapes_c20403 2.099 0.67 0.458 0.962 n y n ruditapes_c13781 -1.819 0.67 1.415 0.777 n y n ruditapes_c18786 -1.873 0.67 1.306 0.697 n y n ruditapes_c23721 -1.873 0.67 1.306 0.697 n y n ruditapes2_c2602 4.497 0.67 0.081 0.365 n y n ruditapes_c18002 4.497 0.67 0.081 0.365 n y n ruditapes_c11565 -2.383 0.67 0.775 0.325 n y n ruditapes_c15408 -2.383 0.67 0.774 0.325 n y n ruditapes_lrc32286 5.396 0.67 0.06 0.322 n y n ruditapes2_c2015 ? 0.67 0 0.182 n y n ruditapes_c17708 ? 0.67 beta precursor /// 0004566 // beta-glucuronidase activity /// 0005764 // lysosome /// 0006027 // glycosaminoglycan catabolic process /// 0005509 // calcium ion binding 0 0.182 n y n ruditapes_c20095 ? 0.67 0 0.182 n y n ruditapes_c20191 ? 0.67 0 0.182 n y n ruditapes_c30520 ? 0.67 adp-ribosylation factor isoform cra_c /// 0006810 // transport /// 0005794 // Golgi apparatus /// 0005515 // protein binding /// 0009987 // cellular process 0 0.182 n y n ruditapes_s39489 ? 0.67 0 0.182 n y n ruditapes_c26783 ? 0.67 0 0.181 n y n ruditapes_c31464 ? 0.67 calmodulin 0 0.181 n y n ruditapes2_c1880 -3.706 0.67 0.436 0.118 n y n ruditapes_lrc32203 -4.448 0.67 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.373 0.084 n y n ruditapes_c15542 -? 0.67 0.182 0 n y n ruditapes_c29938 -? 0.67 0.181 0 n y n ruditapes_s38198 -? 0.67 thioester-containing protein 0.181 0 n y n ruditapes_c19732 -1.167 0.671 17.795 15.245 n n n ruditapes_c1129 1.336 0.671 agrin /// 0005576 // extracellular region /// 0032501 // multicellular organismal process /// 0016043 // cellular component organization /// 0007154 // cell communication 3.576 4.778 n n n ruditapes_c20517 -1.466 0.671 trove domain protein /// 0040010 // positive regulation of growth rate 3.107 2.12 n n n ruditapes_c10239 -1.474 0.671 3.023 2.051 n n n ruditapes_c23375 -1.529 0.671 2.572 1.683 n y n ruditapes2_lrc4279 -1.543 0.671 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 2.47 1.6 n y n ruditapes_c20537 1.799 0.671 0.776 1.396 n y n ruditapes_c13127 -1.723 0.671 1.66 0.963 n y n ruditapes_c28251 -1.779 0.671 1.504 0.845 n y n ruditapes2_lrc5709 2.248 0.671 cell death-regulatory protein grim19 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 0.371 0.834 n y n ruditapes_c13816 -1.837 0.671 1.37 0.746 n y n ruditapes_c7242 2.698 0.671 0.229 0.617 n y n ruditapes_c10806 3.298 0.671 early endosome antigen 1 /// 0005516 // calmodulin binding /// 0045022 // early endosome to late endosome transport /// 0005624 // membrane fraction /// 0019897 // extrinsic to plasma membrane /// 0031901 // early endosome membrane /// 0005829 // cytosol /// 0030742 // GTP-dependent protein binding /// 0008270 // zinc ion binding /// 0006906 // vesicle fusion /// 0005969 // serine-pyruvate aminotransferase complex /// 0016189 // synaptic vesicle to endosome fusion /// 0042803 // protein homodimerization activity /// 0005545 // phosphatidylinositol binding 0.146 0.481 n y n ruditapes_c17850 -2.224 0.671 0.878 0.395 n y n ruditapes_c3409 4.497 0.671 0.081 0.363 n y n ruditapes_c19097 -2.502 0.671 0.71 0.284 n y n ruditapes_s36839 -2.502 0.671 ribosomal protein s5 /// 0006414 // translational elongation /// 0003729 // mRNA binding /// 0006450 // regulation of translational fidelity /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.709 0.283 n y n ruditapes_c24442 ? 0.671 0 0.181 n y n ruditapes_c26926 ? 0.671 0 0.181 n y n ruditapes_c31439 ? 0.671 0 0.181 n y n ruditapes_c9365 ? 0.671 0 0.181 n y n ruditapes_c10327 ? 0.671 smc5 protein 0 0.18 n y n ruditapes_c27692 ? 0.671 0 0.18 n y n ruditapes_lrc35916 ? 0.671 calmodulin /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0016740 // transferase activity /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 0 0.18 n y n ruditapes_c29282 -3.177 0.671 0.511 0.161 n y n ruditapes_lrc26208 -3.558 0.671 0.451 0.127 n y n ruditapes_c2424 -3.812 0.671 0.421 0.111 n y n ruditapes_c26999 -5.559 0.671 tout-velu cg10117-pa "/// 0048856 // anatomical structure development /// 0015014 // heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process /// 0007275 // multicellular organismal development /// 0031224 // intrinsic to membrane /// 0005794 // Golgi apparatus /// 0008194 // UDP-glycosyltransferase activity /// 0008101 // decapentaplegic receptor signaling pathway /// 0016055 // Wnt receptor signaling pathway /// 0008354 // germ cell migration /// 0005515 // protein binding /// 0008589 // regulation of smoothened signaling pathway /// 0030210 // heparin biosynthetic process /// 0005783 // endoplasmic reticulum /// 0016758 // transferase activity, transferring hexosyl groups" 0.319 0.057 n y n ruditapes_lrc38886 -5.559 0.671 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0.319 0.057 n y n ruditapes_c1018 -? 0.671 0.18 0 n y n ruditapes_c23679 -? 0.671 0.18 0 n y n ruditapes_c5011 -? 0.671 0.18 0 n y n ruditapes2_c3259 -1.167 0.672 17.778 15.236 n n n ruditapes_lrc7079 -1.17 0.672 17.15 14.656 n n n ruditapes_lrc10617 -1.235 0.672 9.57 7.749 n n n ruditapes_c12096 -1.287 0.672 tyrosine recombinase 6.797 5.283 n n n ruditapes_c4738 -1.316 0.672 5.744 4.366 n n n ruditapes_lrc10487 -1.324 0.672 5.508 4.16 n n n ruditapes_c28408 1.553 0.672 1.45 2.252 n y n ruditapes_c18265 -1.551 0.672 cellular senescence inhibited gene protein 2.412 1.555 n y n ruditapes_c13634 -1.573 0.672 brain protein i3 2.274 1.446 n y n ruditapes_c15938 -1.58 0.672 2.241 1.418 n y n ruditapes_c7433 -1.595 0.672 2.152 1.349 n y n ruditapes_c19207 1.855 0.672 0.685 1.27 n y n ruditapes_lrc18097 -1.617 0.672 2.045 1.265 n y n ruditapes_c21320 -1.635 0.672 1.969 1.204 n y n ruditapes_c30045 -1.641 0.672 mitochondrial atp synthase gamma chain "/// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 1.943 1.184 n y n ruditapes_c18564 -1.65 0.672 p21 cdc42 rac1-activated kinase 1 1.901 1.152 n y n ruditapes_c11349 -1.657 0.672 growth hormone-releasing hormone receptor /// 0007166 // cell surface receptor linked signal transduction /// 0032501 // multicellular organismal process /// 0016020 // membrane /// 0004930 // G-protein coupled receptor activity 1.878 1.133 n y n ruditapes_lrc33372 -1.668 0.672 translationally controlled tumor protein 1.831 1.098 n y n ruditapes_c20201 1.991 0.672 0.535 1.065 n y n ruditapes_lrc35477 2.069 0.672 0.472 0.977 n y n ruditapes_c9210 -1.718 0.672 malonyl :acp acyltransferase /// 0006633 // fatty acid biosynthetic process /// 0005739 // mitochondrion /// 0004314 // [acyl-carrier-protein] S-malonyltransferase activity 1.665 0.969 n y n ruditapes_c8964 -1.747 0.672 1.574 0.901 n y n ruditapes_c19944 2.158 0.672 0.416 0.898 n y n ruditapes_c13999 -1.76 0.672 trna 2-selenouridine synthase 1.537 0.873 n y n ruditapes_c29061 -1.831 0.672 1.377 0.752 n y n ruditapes_s37749 -1.906 0.672 1.237 0.649 n y n ruditapes_c18328 2.698 0.672 0.227 0.612 n y n ruditapes_c22098 -2.224 0.672 0.87 0.391 n y n ruditapes2_c112 8.544 0.672 0.03 0.256 n y n ruditapes2_lrc4900 -2.859 0.672 unnamed protein product [Tetraodon nigroviridis] 0.578 0.202 n y n ruditapes_c20368 ? 0.672 0 0.18 n y n ruditapes_c11894 ? 0.672 0 0.179 n y n ruditapes_c13949 ? 0.672 0 0.179 n y n ruditapes_c24723 ? 0.672 alpha kinase 0 0.179 n y n ruditapes_c5731 ? 0.672 0 0.179 n y n ruditapes_c9955 ? 0.672 placental protein 11 related 0 0.179 n y n ruditapes_lrc39288 ? 0.672 ubiquinol-cytochrome c reductase binding protein /// 0006091 // generation of precursor metabolites and energy /// 0005743 // mitochondrial inner membrane 0 0.179 n y n ruditapes2_c1912 -4.448 0.672 0.367 0.083 n y n ruditapes_c20189 -? 0.672 0.18 0 n y n ruditapes_c13494 -? 0.672 0.179 0 n y n ruditapes_c17997 -1.165 0.673 18.149 15.584 n n n ruditapes2_c924 1.285 0.673 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 4.74 6.093 n n n ruditapes2_lrc5201 -1.282 0.673 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 6.901 5.382 n n n ruditapes_c1493 -1.29 0.673 6.591 5.109 n n n ruditapes2_c3801 -1.388 0.673 p8 nuclear protein 4.086 2.944 n n n ruditapes_c3261 -1.392 0.673 4.03 2.896 n n n ruditapes_c8994 -1.437 0.673 3.384 2.355 n n n ruditapes_c28261 1.686 0.673 0.99 1.669 n y n ruditapes_c25642 -1.561 0.673 2.335 1.495 n y n ruditapes_c24241 1.749 0.673 0.852 1.49 n y n ruditapes_c15255 1.927 0.673 tyrosyl-trna synthetase /// 0006437 // tyrosyl-tRNA aminoacylation /// 0005153 // interleukin-8 receptor binding /// 0004831 // tyrosine-tRNA ligase activity /// 0000166 // nucleotide binding /// 0005625 // soluble fraction /// 0004871 // signal transducer activity /// 0006915 // apoptosis /// 0005615 // extracellular space /// 0005737 // cytoplasm /// 0003723 // RNA binding 0.595 1.147 n y n ruditapes_c19689 2.024 0.673 wd-repeat containing protein /// 0007010 // cytoskeleton organization /// 0005643 // nuclear pore /// 0051028 // mRNA transport /// 0005737 // cytoplasm /// 0065002 // intracellular protein transmembrane transport 0.506 1.023 n y n ruditapes_c18739 2.024 0.673 0.504 1.019 n y n ruditapes2_c1693 -1.81 0.673 hypothetical protein AaeL_AAEL012863 [Aedes aegypti] 1.41 0.779 n y n ruditapes_c27068 -1.812 0.673 1.404 0.775 n y n ruditapes_lrc35184 2.323 0.673 atp synthase beta "/// 0005524 // ATP binding /// 0005811 // lipid particle /// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 0.333 0.775 n y n ruditapes_c10805 -1.823 0.673 1.385 0.76 n y n ruditapes2_lrc2263 -1.868 0.673 1.293 0.692 n y n ruditapes_c27296 -1.887 0.673 centrin 3 /// 0005932 // microtubule basal body /// 0005814 // centriole /// 0051301 // cell division /// 0031683 // G-protein beta/gamma-subunit binding /// 0007098 // centrosome cycle /// 0032391 // photoreceptor connecting cilium /// 0005509 // calcium ion binding /// 0007067 // mitosis 1.257 0.666 n y n ruditapes_lrc17644 2.698 0.673 0.226 0.611 n y n ruditapes_c3099 2.848 0.673 lysosomal-associated transmembrane 0.199 0.567 n y n ruditapes_c17034 3.148 0.673 microsomal glutathione s-transferase 3 0.158 0.498 n y n ruditapes_c30922 3.298 0.673 0.143 0.472 n y n ruditapes_lrc38639 -2.224 0.673 0.868 0.39 n y n ruditapes_c31598 -2.224 0.673 0.866 0.389 n y n ruditapes_c15164 ? 0.673 0 0.179 n y n ruditapes_c20239 ? 0.673 0 0.179 n y n ruditapes2_lrc5080 ? 0.673 0 0.178 n y n ruditapes_c13872 ? 0.673 0 0.178 n y n ruditapes_c18437 ? 0.673 0 0.178 n y n ruditapes_c20381 ? 0.673 0 0.178 n y n ruditapes_c25153 ? 0.673 0 0.178 n y n ruditapes_c23575 -3.113 0.673 pol-like protein 0.515 0.166 n y n ruditapes2_lrc5269 -? 0.673 0.178 0 n y n ruditapes_c10874 -? 0.673 0.178 0 n y n ruditapes_c21734 -? 0.673 0.178 0 n y n ruditapes2_lrc4267 1.119 0.674 cytoplasmic 1 /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0007605 // sensory perception of sound /// 0005856 // cytoskeleton /// 0042802 // identical protein binding /// 0035267 // NuA4 histone acetyltransferase complex /// 0005625 // soluble fraction /// 0050998 // nitric-oxide synthase binding /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0006928 // cell motion 23.565 26.368 n n n ruditapes2_c1582 -1.199 0.674 nadh dehydrogenase fe-s protein 75kda (nadh-coenzyme q reductase) "/// 0006810 // transport /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0051537 // 2 iron, 2 sulfur cluster binding /// 0046034 // ATP metabolic process /// 0005758 // mitochondrial intermembrane space /// 0005747 // mitochondrial respiratory chain complex I /// 0006915 // apoptosis /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0045333 // cellular respiration /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0051881 // regulation of mitochondrial membrane potential" 12.683 10.577 n n n ruditapes_c27038 -1.215 0.674 11.036 9.082 n n n ruditapes_c20996 1.259 0.674 5.627 7.085 n n n ruditapes2_c2663 1.326 0.674 3.685 4.887 n n n ruditapes_c26779 -1.297 0.674 6.299 4.856 n n n ruditapes_lrc9889 -1.303 0.674 6.073 4.66 n n n ruditapes2_lrc5863 -1.345 0.674 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 4.908 3.649 n n n ruditapes2_lrc4772 -1.384 0.674 4.111 2.97 n n n ruditapes_c26221 1.542 0.674 1.483 2.287 n y n ruditapes_c18909 1.686 0.674 0.988 1.665 n y n ruditapes_c22857 -1.8 0.674 1.42 0.789 n y n ruditapes_c10236 -1.819 0.674 1.381 0.759 n y n ruditapes_c27476 3.148 0.674 0.158 0.497 n y n ruditapes_c26808 4.497 0.674 0.079 0.356 n y n ruditapes_c7220 4.947 0.674 collagen type vi alpha 6 0.067 0.332 n y n ruditapes_lrc27790 5.396 0.674 mitochondrial ribosomal protein s6 0.058 0.314 n y n ruditapes_c17686 -2.409 0.674 fibropellin partial 0.742 0.308 n y n ruditapes_c10571 ? 0.674 baculoviral iap repeat-containing 7 /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process /// 0016023 // cytoplasmic membrane-bounded vesicle 0 0.177 n y n ruditapes_c16349 ? 0.674 0 0.177 n y n ruditapes_c16506 ? 0.674 brevican /// 0005739 // mitochondrion /// 0005730 // nucleolus /// 0005488 // binding /// 0030672 // synaptic vesicle membrane /// 0048168 // regulation of neuronal synaptic plasticity 0 0.177 n y n ruditapes_c22790 ? 0.674 complement component c3 0 0.177 n y n ruditapes_c23056 ? 0.674 dnaj_tetha ame: full=chaperone protein dnaj 0 0.177 n y n ruditapes_c28830 ? 0.674 0 0.177 n y n ruditapes_c4162 ? 0.674 0 0.177 n y n ruditapes_c453 ? 0.674 chromosome 12 open reading frame 69 0 0.177 n y n ruditapes_c6268 ? 0.674 0 0.177 n y n ruditapes_c6326 ? 0.674 bone morphogenetic protein 1 0 0.176 n y n ruditapes_c26066 -3.336 0.674 0.474 0.142 n y n ruditapes_lrc36132 -3.336 0.674 cell death-regulatory protein grim19 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 0.474 0.142 n y n ruditapes_c35209 -3.336 0.674 alkaline phosphatase /// 0046872 // metal ion binding /// 0005886 // plasma membrane /// 0004035 // alkaline phosphatase activity /// 0046677 // response to antibiotic 0.473 0.142 n y n ruditapes_lrc18949 -3.336 0.674 0.472 0.142 n y n ruditapes_c19450 -3.706 0.674 0.424 0.114 n y n ruditapes_c20242 -1.206 0.675 11.832 9.812 n n n ruditapes_c11474 -1.224 0.675 10.243 8.37 n n n ruditapes_c13325 -1.289 0.675 6.586 5.111 n n n ruditapes_c17868 -1.355 0.675 4.659 3.438 n n n ruditapes_c19179 -1.418 0.675 3.575 2.521 n n n ruditapes_c16949 -1.551 0.675 2.362 1.523 n y n ruditapes_c8897 -1.679 0.675 cell adhesion molecule 1.763 1.05 n y n ruditapes_c26728 -1.882 0.675 1.248 0.663 n y n ruditapes_c25699 -1.921 0.675 1.185 0.617 n y n ruditapes2_c51 -1.957 0.675 1.132 0.579 n y n ruditapes_c22742 3.148 0.675 0.157 0.494 n y n ruditapes_s40415 3.148 0.675 0.157 0.493 n y n ruditapes_c9888 -2.502 0.675 0.693 0.277 n y n ruditapes_c19922 -2.541 0.675 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 0.676 0.266 n y n ruditapes2_c2497 -2.78 0.675 0.59 0.212 n y n ruditapes_c16831 -2.859 0.675 family with sequence similarity member b 0.566 0.198 n y n ruditapes_c21311 ? 0.675 slit2 protein /// 0007409 // axonogenesis /// 0040011 // locomotion /// 0048513 // organ development /// 0006928 // cell motion 0 0.176 n y n ruditapes_c23178 ? 0.675 0 0.176 n y n ruditapes_c26245 ? 0.675 0 0.176 n y n ruditapes_c13345 ? 0.675 0 0.175 n y n ruditapes_lrc36233 -3.336 0.675 methyltransferase type 11 0.471 0.141 n y n ruditapes_s34661 -4.448 0.675 40s ribosomal protein s10 /// 0005840 // ribosome 0.362 0.081 n y n ruditapes_c11655 -4.448 0.675 0.361 0.081 n y n ruditapes_c16291 -4.448 0.675 0.36 0.081 n y n ruditapes_c29161 -4.448 0.675 0.36 0.081 n y n ruditapes_c11849 -8.895 0.675 0.249 0.028 n y n ruditapes_lrc34988 -8.895 0.675 ubiquinol-cytochrome c reductase hinge "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.249 0.028 n y n ruditapes_c14868 -? 0.675 0.176 0 n y n ruditapes_c8186 -? 0.675 0.176 0 n y n ruditapes_s39084 -? 0.675 0.176 0 n y n ruditapes_c17529 -1.221 0.676 10.378 8.499 n n n ruditapes_c29999 1.246 0.676 6.129 7.636 n n n ruditapes_c10945 1.349 0.676 3.232 4.36 n n n ruditapes2_lrc4166 1.482 0.676 mitochondrial ubiquinol cytochrome c reductase complex 1.807 2.679 n n n ruditapes_c22744 -1.436 0.676 3.34 2.325 n n n ruditapes_c28093 -1.506 0.676 fshd region gene 1 /// 0016607 // nuclear speck /// 0008380 // RNA splicing /// 0006810 // transport /// 0005681 // spliceosomal complex /// 0005215 // transporter activity /// 0005488 // binding /// 0006397 // mRNA processing /// 0006364 // rRNA processing 2.658 1.764 n y n ruditapes_c7053 -1.519 0.676 fad binding domain protein 2.569 1.692 n y n ruditapes_c10366 -1.566 0.676 ef-hand calcium binding domain 2 /// 0005509 // calcium ion binding 2.256 1.441 n y n ruditapes_c10290 1.874 0.676 chromosome 1 open reading frame 146 0.645 1.209 n y n ruditapes_c7288 -1.73 0.676 1.584 0.916 n y n ruditapes_c10509 2.338 0.676 inositol -trisphosphate 3-kinase b /// 0007166 // cell surface receptor linked signal transduction /// 0046579 // positive regulation of Ras protein signal transduction /// 0046638 // positive regulation of alpha-beta T cell differentiation /// 0000165 // MAPKKK cascade /// 0008440 // inositol trisphosphate 3-kinase activity /// 0045059 // positive thymic T cell selection 0.32 0.749 n y n ruditapes2_c6146 2.548 0.676 translation elongation factor 1b delta 2 subunit isoform 2 0.255 0.649 n y n ruditapes_c16798 2.698 0.676 0.221 0.596 n y n ruditapes_c13811 3.373 0.676 0.134 0.453 n y n ruditapes2_lrc6377 -2.107 0.676 mitochondrial atp synthase lipid binding protein precursor "/// 0006811 // ion transport /// 0033177 // proton-transporting two-sector ATPase complex, proton-transporting domain" 0.947 0.449 n y n ruditapes2_c4089 6.296 0.676 isoform c 0.045 0.286 n y n ruditapes_c5111 6.745 0.676 0.041 0.275 n y n ruditapes_c20130 ? 0.676 0 0.175 n y n ruditapes_c26230 ? 0.676 0 0.175 n y n ruditapes_c26658 ? 0.676 0 0.175 n y n ruditapes_c27567 ? 0.676 0 0.175 n y n ruditapes_c8629 ? 0.676 0 0.175 n y n ruditapes_c9114 ? 0.676 0 0.175 n y n ruditapes_c9200 ? 0.676 hemicentin 1 /// 0005576 // extracellular region /// 0044237 // cellular metabolic process /// 0016787 // hydrolase activity 0 0.175 n y n ruditapes_c19406 ? 0.676 0 0.174 n y n ruditapes_c30483 ? 0.676 0 0.174 n y n ruditapes_c16477 -3.336 0.676 0.469 0.14 n y n ruditapes_lrc16696 -3.336 0.676 0.469 0.14 n y n ruditapes_s37481 -3.706 0.676 protein /// 0003824 // catalytic activity /// 0005488 // binding 0.421 0.113 n y n ruditapes_c27432 -6.671 0.676 0.28 0.042 n y n ruditapes_c8162 -6.671 0.676 0.279 0.042 n y n ruditapes_c23753 -? 0.676 0.174 0 n y n ruditapes_c21837 1.153 0.677 14.587 16.811 n n n ruditapes_c11972 -1.185 0.677 14.264 12.041 n n n ruditapes2_c1057 -1.206 0.677 11.677 9.681 n n n ruditapes_c30794 1.272 0.677 tetraspanin 3 5.038 6.408 n n n ruditapes_c30849 1.375 0.677 2.809 3.862 n n n ruditapes_c7176 -1.341 0.677 member ras oncogene family "/// 0007264 // small GTPase mediated signal transduction /// 0005524 // ATP binding /// 0006355 // regulation of transcription, DNA-dependent /// 0005794 // Golgi apparatus /// 0006886 // intracellular protein transport /// 0005886 // plasma membrane /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0006888 // ER to Golgi vesicle-mediated transport /// 0005783 // endoplasmic reticulum /// 0008134 // transcription factor binding" 4.907 3.658 n n n ruditapes_c12799 1.417 0.677 2.324 3.292 n n n ruditapes_c8759 1.456 0.677 1.983 2.886 n n n ruditapes2_c2402 -1.456 0.677 3.103 2.131 n n n ruditapes2_c3927 -1.476 0.677 serine proteases and ovochymase regions /// 0016020 // membrane /// 0016787 // hydrolase activity 2.897 1.963 n n n ruditapes_c15167 -1.535 0.677 ribokinase /// 0003824 // catalytic activity 2.434 1.585 n y n ruditapes_c23528 1.855 0.677 0.666 1.235 n y n ruditapes_c17977 1.874 0.677 0.639 1.198 n y n ruditapes_c16290 -1.649 0.677 alkaline phosphatase /// 0003824 // catalytic activity 1.845 1.119 n y n ruditapes_c39280 -1.853 0.677 1.287 0.694 n y n ruditapes_c27437 -1.873 0.677 1.247 0.666 n y n ruditapes_c10902 2.518 0.677 isoform cra_a 0.261 0.657 n y n ruditapes_c22793 2.548 0.677 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.254 0.647 n y n ruditapes_c8378 2.548 0.677 0.254 0.647 n y n ruditapes_s38505 2.698 0.677 0.22 0.593 n y n ruditapes_c14906 -1.946 0.677 1.133 0.582 n y n ruditapes2_c5375 2.811 0.677 collagen alpha-2 type i chain 0.199 0.561 n y n ruditapes_c19911 -1.986 0.677 pol-like protein /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0044424 // intracellular part 1.08 0.544 n y n ruditapes_c3203 3.148 0.677 glutaredoxin 2 0.155 0.488 n y n ruditapes_c27594 3.822 0.677 0.104 0.398 n y n ruditapes_c26243 4.497 0.677 0.077 0.348 n y n ruditapes_c19062 ? 0.677 0 0.174 n y n ruditapes_c2854 ? 0.677 AF339450_1hillarin [Hirudo medicinalis] 0 0.174 n y n ruditapes_c5052 ? 0.677 tandem repeat galectin /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 0 0.174 n y n ruditapes_c9597 ? 0.677 0 0.174 n y n ruditapes_c15350 ? 0.677 0 0.173 n y n ruditapes_c20855 ? 0.677 0 0.173 n y n ruditapes_c21454 ? 0.677 0 0.173 n y n ruditapes_c22479 ? 0.677 0 0.173 n y n ruditapes_s35737 ? 0.677 novel protein (zgc:100919) 0 0.173 n y n ruditapes_s37802 -4.448 0.677 ribosomal protein l17 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005829 // cytosol 0.356 0.08 n y n ruditapes_c26660 -5.559 0.677 0.306 0.055 n y n ruditapes_s37869 -6.671 0.677 tandem repeat galectin 0.277 0.042 n y n ruditapes_c12389 -8.895 0.677 0.246 0.028 n y n ruditapes_c24347 -8.895 0.677 0.246 0.028 n y n ruditapes_c19899 -? 0.677 0.174 0 n y n ruditapes_c23667 -? 0.677 0.174 0 n y n ruditapes_c27705 -? 0.677 0.174 0 n y n ruditapes_s35199 -? 0.677 0.174 0 n y n ruditapes_s33649 -? 0.677 0.173 0 n y n ruditapes_c25202 -1.133 0.678 26.199 23.121 n n n ruditapes_lrc38053 -1.183 0.678 nicotinamide nucleotide transhydrogenase /// 0055114 // oxidation reduction /// 0008750 // NAD(P)+ transhydrogenase (AB-specific) activity /// 0015992 // proton transport /// 0005488 // binding /// 0003957 // NAD(P)+ transhydrogenase (B-specific) activity /// 0009055 // electron carrier activity 14.324 12.103 n n n ruditapes2_c482 1.319 0.678 ubiquitin-conjugating enzyme e2i "/// 0016925 // protein sumoylation /// 0045202 // synapse /// 0007059 // chromosome segregation /// 0000795 // synaptonemal complex /// 0051091 // positive regulation of transcription factor activity /// 0007275 // multicellular organismal development /// 0033145 // positive regulation of steroid hormone receptor signaling pathway /// 0016605 // PML body /// 0051301 // cell division /// 0051246 // regulation of protein metabolic process /// 0010469 // regulation of receptor activity /// 0043161 // proteasomal ubiquitin-dependent protein catabolic process /// 0019789 // SUMO ligase activity /// 0008022 // protein C-terminus binding /// 0043398 // HLH domain binding /// 0045892 // negative regulation of transcription, DNA-dependent /// 0004842 // ubiquitin-protein ligase activity /// 0007067 // mitosis /// 0043425 // bHLH transcription factor binding /// 0016566 // specific transcriptional repressor activity /// 0030425 // dendrite /// 0044419 // interspecies interaction between organisms" 3.75 4.947 n n n ruditapes_c21770 -1.303 0.678 nicotinic acetylcholine receptor subunit type g /// 0009987 // cellular process 5.935 4.554 n n n ruditapes_lrc15661 1.407 0.678 2.416 3.4 n n n ruditapes_c7666 -1.444 0.678 3.207 2.221 n n n ruditapes_c9093 -1.588 0.678 2.107 1.327 n y n ruditapes_c4770 -1.594 0.678 sulfotransferase member 1 /// 0018958 // phenol metabolic process /// 0042403 // thyroid hormone metabolic process /// 0005829 // cytosol /// 0004062 // aryl sulfotransferase activity 2.076 1.302 n y n ruditapes_c18845 -1.65 0.678 1.826 1.107 n y n ruditapes_c14169 2.136 0.678 isoform a 0.413 0.883 n y n ruditapes_s38712 2.398 0.678 0.295 0.708 n y n ruditapes_c27288 4.047 0.678 0.093 0.378 n y n ruditapes_s39122 -2.224 0.678 0.837 0.377 n y n ruditapes_c15297 -2.224 0.678 0.836 0.376 n y n ruditapes_c8896 -2.78 0.678 0.578 0.208 n y n ruditapes_c14770 ? 0.678 0 0.173 n y n ruditapes_c14479 ? 0.678 0 0.172 n y n ruditapes_c16901 ? 0.678 0 0.172 n y n ruditapes_c2242 -3.336 0.678 0.46 0.138 n y n ruditapes_lrc16946 -3.892 0.678 calponin homolog 0.397 0.102 n y n ruditapes_c14852 -? 0.678 0.173 0 n y n ruditapes_c31531 -? 0.678 0.173 0 n y n ruditapes_c24790 -? 0.678 0.172 0 n y n ruditapes_c27958 -? 0.678 0.172 0 n y n ruditapes_c29599 -? 0.678 0.172 0 n y n ruditapes_c28084 -1.277 0.679 6.892 5.399 n n n ruditapes_c27842 -1.292 0.679 6.269 4.85 n n n ruditapes2_c1452 -1.304 0.679 5.864 4.496 n n n ruditapes2_c1877 -1.315 0.679 nadh dehydrogenase 1 alpha assembly factor 1 5.532 4.207 n n n ruditapes2_c2930 -1.351 0.679 4.611 3.414 n n n ruditapes_c35414 -1.371 0.679 4.219 3.078 n n n ruditapes_lrc32166 -1.397 0.679 3.797 2.718 n n n ruditapes_c10736 -1.401 0.679 diphthamide biosynthesis protein 2 3.714 2.65 n n n ruditapes_c22071 -1.43 0.679 predicted protein [Nematostella vectensis] 3.343 2.338 n n n ruditapes_c17998 -1.435 0.679 replication factor c (activator 1) 38kda /// 0044446 // intracellular organelle part /// 0016887 // ATPase activity /// 0005634 // nucleus /// 0005488 // binding /// 0006281 // DNA repair /// 0006260 // DNA replication 3.278 2.285 n n n ruditapes_c19968 -1.598 0.679 2.042 1.277 n y n ruditapes_lrc37313 1.874 0.679 0.632 1.184 n y n ruditapes2_c2407 -1.639 0.679 1.871 1.142 n y n ruditapes_c38248 -1.779 0.679 cytochrome c-1 "/// 0005811 // lipid particle /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0045153 // electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity /// 0020037 // heme binding /// 0005750 // mitochondrial respiratory chain complex III" 1.431 0.805 n y n ruditapes_c26482 -1.946 0.679 1.121 0.576 n y n ruditapes_c26218 -1.946 0.679 pogo transposable /// 0005634 // nucleus /// 0003676 // nucleic acid binding 1.119 0.575 n y n ruditapes_c10099 -2.471 0.679 0.69 0.279 n y n ruditapes_c15046 -2.669 0.679 0.61 0.229 n y n ruditapes_c24540 -2.859 0.679 0.554 0.194 n y n ruditapes_c15927 ? 0.679 0 0.172 n y n ruditapes_c20010 ? 0.679 0 0.172 n y n ruditapes_c29810 ? 0.679 0 0.172 n y n ruditapes_c30856 ? 0.679 0 0.172 n y n ruditapes_c10060 ? 0.679 complement component q subcomponent-like 4 0 0.171 n y n ruditapes_c14788 ? 0.679 0 0.171 n y n ruditapes_c2050 ? 0.679 0 0.171 n y n ruditapes_c21292 ? 0.679 0 0.171 n y n ruditapes_c24907 ? 0.679 mitogen-activated protein kinase kinase 7 0 0.171 n y n ruditapes_c27763 ? 0.679 0 0.171 n y n ruditapes_c3441 ? 0.679 0 0.171 n y n ruditapes_s38835 ? 0.679 0 0.171 n y n ruditapes_c5051 -3.706 0.679 0.411 0.111 n y n ruditapes_c11705 -5.559 0.679 0.301 0.054 n y n ruditapes_c7861 -5.559 0.679 0.301 0.054 n y n ruditapes_c21633 -6.671 0.679 0.273 0.041 n y n ruditapes2_lrc6973 -8.895 0.679 0.242 0.027 n y n ruditapes_c13998 -? 0.679 0.172 0 n y n ruditapes_c26646 -? 0.679 0.172 0 n y n ruditapes_c932 -? 0.679 0.172 0 n y n ruditapes_c12125 -? 0.679 0.171 0 n y n ruditapes_c15165 -? 0.679 galactose-specific c-type 0.171 0 n y n ruditapes_c16519 -? 0.679 0.171 0 n y n ruditapes_s40376 -? 0.679 0.171 0 n y n ruditapes_c11665 1.114 0.68 24.414 27.202 n n n ruditapes_c12708 1.23 0.68 6.698 8.242 n n n ruditapes_c23841 -1.304 0.68 5.831 4.473 n n n ruditapes2_c950 -1.315 0.68 sarcosine oxidase /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 5.479 4.165 n n n ruditapes_c28859 1.386 0.68 2.617 3.627 n n n ruditapes_c24591 -1.436 0.68 3.239 2.256 n n n ruditapes_lrc22012 -1.544 0.68 2.327 1.507 n y n ruditapes2_c1197 -1.57 0.68 calmodulin-like protein 2.181 1.389 n y n ruditapes_c22469 1.911 0.68 0.583 1.115 n y n ruditapes_c3621 -1.668 0.68 1.743 1.045 n y n ruditapes_c10550 -1.735 0.68 transmembrane protein 179 1.528 0.881 n y n ruditapes_c25412 -1.853 0.68 1.259 0.679 n y n ruditapes_c19741 -2.053 0.68 0.979 0.477 n y n ruditapes_c22139 -2.076 0.68 0.952 0.459 n y n ruditapes2_lrc6915 3.448 0.68 elastase 2 like /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0007596 // blood coagulation /// 0008233 // peptidase activity 0.125 0.433 n y n ruditapes_c29190 -2.224 0.68 0.829 0.373 n y n ruditapes_c30421 -2.224 0.68 0.829 0.373 n y n ruditapes2_lrc2787 -2.224 0.68 0.828 0.372 n y n ruditapes_c23058 -2.224 0.68 0.828 0.372 n y n ruditapes_c1732 -2.224 0.68 "secreted protein, putative [Ixodes scapularis]" 0.827 0.372 n y n ruditapes_c9899 -2.594 0.68 0.633 0.244 n y n ruditapes_c24766 ? 0.68 3-hydroxybutyrate type 1 /// 0005759 // mitochondrial matrix /// 0003858 // 3-hydroxybutyrate dehydrogenase activity 0 0.17 n y n ruditapes_c31223 -3.336 0.68 0.455 0.136 n y n ruditapes_c8419 -3.336 0.68 0.455 0.136 n y n ruditapes_s35947 -3.706 0.68 cytochrome c oxidase subunit viic 0.41 0.111 n y n ruditapes_c11935 -4.003 0.68 0.381 0.095 n y n ruditapes_c29120 -4.448 0.68 0.349 0.079 n y n ruditapes2_lrc3835 -? 0.68 0.17 0 n y n ruditapes_lrc14075 -1.048 0.681 60s acidic ribosomal protein p0 /// 0042254 // ribosome biogenesis /// 0005840 // ribosome 217.032 207.132 n n n ruditapes2_c830 -1.245 0.681 metallothionein /// 0046872 // metal ion binding 8.357 6.71 n n n ruditapes_c17424 -1.383 0.681 3.959 2.863 n n n ruditapes_c24122 1.499 0.681 1.644 2.464 n n n ruditapes_c21368 1.529 0.681 1.479 2.261 n y n ruditapes_c15462 -1.464 0.681 2.933 2.004 n n n ruditapes_c11967 -1.483 0.681 microrchidia 2a /// 0005524 // ATP binding /// 0008270 // zinc ion binding 2.763 1.863 n n n ruditapes_c10334 1.649 0.681 vacuolar protein sorting 8 homolog ( cerevisiae) 1.039 1.713 n y n ruditapes2_lrc3896 -1.537 0.681 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 2.359 1.535 n y n ruditapes_c11866 -1.537 0.681 ras suppressor protein 1 /// 0007265 // Ras protein signal transduction /// 0005515 // protein binding 2.353 1.531 n y n ruditapes_lrc36369 1.84 0.681 nadh dehydrogenase subunit 1 0.667 1.228 n y n ruditapes_c17757 1.855 0.681 friend leukemia virus integration 1 /// 0003677 // DNA binding /// 0009887 // organ morphogenesis 0.649 1.203 n y n ruditapes_lrc34886 1.949 0.681 0.544 1.059 n y n ruditapes_c20417 1.991 0.681 0.506 1.007 n y n ruditapes_c7993 -1.694 0.681 1.638 0.967 n y n ruditapes_c10597 -1.743 0.681 1.497 0.859 n y n ruditapes_c5371 2.338 0.681 peptidyl-prolyl cis-trans isomerase h 0.31 0.725 n y n ruditapes_c17800 -1.946 0.681 1.1 0.565 n y n ruditapes_c19644 -2.471 0.681 0.678 0.274 n y n ruditapes_c21635 -2.502 0.681 0.666 0.266 n y n ruditapes2_lrc5849 ? 0.681 0 0.169 n y n ruditapes_c16076 ? 0.681 0 0.169 n y n ruditapes_c24948 ? 0.681 0 0.169 n y n ruditapes_c27667 ? 0.681 0 0.169 n y n ruditapes_c31245 ? 0.681 0 0.169 n y n ruditapes_lrc34191 ? 0.681 mitochondrial atp synthase lipid binding protein precursor 0 0.169 n y n ruditapes_lrc35734 ? 0.681 toxin i 0 0.169 n y n ruditapes_c30374 -3.336 0.681 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.452 0.136 n y n ruditapes_c13586 -4.448 0.681 0.348 0.078 n y n ruditapes_c29130 -4.448 0.681 0.347 0.078 n y n ruditapes_s35196 -4.448 0.681 0.347 0.078 n y n ruditapes2_c2722 -5.559 0.681 0.299 0.054 n y n ruditapes_c13596 -? 0.681 0.169 0 n y n ruditapes_c18440 -? 0.681 0.169 0 n y n ruditapes_c23698 -? 0.681 0.169 0 n y n ruditapes_c7183 -? 0.681 sarcoplasmic calcium-binding protein 0.169 0 n y n ruditapes_s39526 -? 0.681 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.169 0 n y n ruditapes_c426 -1.129 0.682 beta-ig-h3 fasciclin 27.311 24.192 n n n ruditapes_lrc35466 1.211 0.682 7.803 9.448 n n n ruditapes_c18750 1.296 0.682 4.175 5.409 n n n ruditapes2_c374 1.394 0.682 kazal-type proteinase inhibitor 2.485 3.464 n n n ruditapes_lrc27490 1.431 0.682 2.12 3.033 n n n ruditapes_c26146 -1.378 0.682 4.003 2.905 n n n ruditapes_c10814 1.64 0.682 cathepsin l-like cysteine proteinase /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 1.053 1.727 n y n ruditapes_c2447 -1.527 0.682 2.413 1.581 n y n ruditapes_c25301 1.686 0.682 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0.933 1.573 n y n ruditapes_lrc37334 1.799 0.682 0.719 1.293 n y n ruditapes_c21069 -1.639 0.682 cytochrome c oxidase assembly protein cox11 1.822 1.112 n y n ruditapes_c8079 -1.723 0.682 cg11638-pa isoform 1 1.54 0.894 n y n ruditapes_lrc37418 -1.73 0.682 1.525 0.882 n y n ruditapes_c22789 -1.74 0.682 1.491 0.857 n y n ruditapes_c7655 -1.779 0.682 1.398 0.786 n y n ruditapes_c15972 2.923 0.682 0.176 0.514 n y n ruditapes_c8583 -2.224 0.682 0.816 0.367 n y n ruditapes2_c3133 -2.347 0.682 0.738 0.314 n y n ruditapes2_lrc5874 ? 0.682 0 0.168 n y n ruditapes_c15600 ? 0.682 0 0.168 n y n ruditapes_c24367 ? 0.682 isoform a 0 0.168 n y n ruditapes_c24640 ? 0.682 0 0.168 n y n ruditapes_c15348 ? 0.682 0 0.167 n y n ruditapes_c17985 ? 0.682 0 0.167 n y n ruditapes_c25979 ? 0.682 thioester-containing protein /// 0005576 // extracellular region 0 0.167 n y n ruditapes_c31035 ? 0.682 0 0.167 n y n ruditapes_c5035 ? 0.682 predicted protein [Nematostella vectensis] 0 0.167 n y n ruditapes_c21705 -3.336 0.682 tetratricopeptide repeat domain 25 0.45 0.135 n y n ruditapes_lrc8460 -3.336 0.682 ribosomal protein l18 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 0.449 0.135 n y n ruditapes_c12801 -3.706 0.682 0.402 0.108 n y n ruditapes_lrc35705 -8.895 0.682 predicted protein [Nematostella vectensis] 0.239 0.027 n y n ruditapes_c16204 -? 0.682 0.168 0 n y n ruditapes_c19889 -? 0.682 0.168 0 n y n ruditapes_c12066 -? 0.682 0.167 0 n y n ruditapes_c20591 -? 0.682 0.167 0 n y n ruditapes_c14452 1.205 0.683 8.176 9.848 n n n ruditapes_c12506 1.349 0.683 3.083 4.159 n n n ruditapes_c11559 1.349 0.683 3.071 4.142 n n n ruditapes_c24535 -1.317 0.683 5.305 4.028 n n n ruditapes_c23416 1.362 0.683 2.888 3.933 n n n ruditapes_c29147 -1.386 0.683 3.869 2.791 n n n ruditapes_c12532 -1.425 0.683 3.317 2.329 n n n ruditapes_c28476 -1.465 0.683 2.887 1.97 n n n ruditapes_c30313 1.649 0.683 1.023 1.686 n y n ruditapes_c12665 -1.623 0.683 1.883 1.16 n y n ruditapes_c29477 -1.769 0.683 nuclear factor kappa- subunit 1 /// 0010556 // regulation of macromolecule biosynthetic process /// 0031326 // regulation of cellular biosynthetic process /// 0034645 // cellular macromolecule biosynthetic process 1.413 0.799 n y n ruditapes_c9519 2.548 0.683 0.244 0.622 n y n ruditapes_c31703 -1.906 0.683 1.151 0.604 n y n ruditapes2_lrc4802 -1.906 0.683 calcium binding protein 1 1.145 0.601 n y n ruditapes_c13355 3.148 0.683 0.149 0.469 n y n ruditapes2_c2768 3.373 0.683 transthyretin-like protein precursor "/// 0016811 // hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0006144 // purine base metabolic process" 0.128 0.433 n y n ruditapes_c19437 4.047 0.683 lycerol kinase family member (dgk-1) "/// 0040013 // negative regulation of locomotion /// 0017048 // Rho GTPase binding /// 0007210 // serotonin receptor signaling pathway /// 0007212 // dopamine receptor signaling pathway /// 0004143 // diacylglycerol kinase activity /// 0032094 // response to food /// 0007271 // synaptic transmission, cholinergic /// 0046662 // regulation of oviposition" 0.09 0.365 n y n ruditapes_c16259 -2.224 0.683 0.808 0.364 n y n ruditapes_lrc36165 -2.471 0.683 0.67 0.271 n y n ruditapes2_lrc7355 -2.594 0.683 protein /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.621 0.24 n y n ruditapes_c8608 ? 0.683 0 0.167 n y n ruditapes_c16980 ? 0.683 flavin reductase 0 0.166 n y n ruditapes_c17789 -3.113 0.683 0.482 0.155 n y n ruditapes_c23044 -3.336 0.683 0.445 0.133 n y n ruditapes_c28422 -3.706 0.683 0.4 0.108 n y n ruditapes_c5117 -6.671 0.683 0.266 0.04 n y n ruditapes_c19542 -? 0.683 aldose reductase /// 0016491 // oxidoreductase activity 0.167 0 n y n ruditapes_c29832 -? 0.683 0.167 0 n y n ruditapes2_c869 -? 0.683 0.166 0 n y n ruditapes_c784 -1.148 0.684 myosin heavy chain /// 0005488 // binding 20.494 17.845 n n n ruditapes_c35806 -1.208 0.684 10.935 9.05 n n n ruditapes_c9799 1.273 0.684 4.784 6.089 n n n ruditapes_c20894 -1.271 0.684 6.923 5.448 n n n ruditapes_c20321 1.305 0.684 3.918 5.112 n n n ruditapes2_c1743 1.312 0.684 3.747 4.914 n n n ruditapes_c24411 -1.289 0.684 cystatin b 6.199 4.81 n n n ruditapes_c9935 -1.297 0.684 5.925 4.569 n n n ruditapes2_c83 -1.384 0.684 serine protease1 2 3.865 2.793 n n n ruditapes_c27882 -1.431 0.684 3.205 2.239 n n n ruditapes_c30708 -1.466 0.684 2.866 1.956 n n n ruditapes_c21091 -1.567 0.684 2.142 1.367 n y n ruditapes_c30109 2.248 0.684 0.339 0.763 n y n ruditapes_lrc33876 -1.853 0.684 cathepsin l /// 0008234 // cysteine-type peptidase activity 1.231 0.664 n y n ruditapes_c13589 2.548 0.684 0.242 0.616 n y n ruditapes_c28661 2.698 0.684 0.21 0.565 n y n ruditapes_c8717 -1.977 0.684 1.044 0.528 n y n ruditapes_c18674 -2.053 0.684 0.955 0.465 n y n ruditapes_c18924 -2.541 0.684 0.635 0.25 n y n ruditapes_c16234 -2.669 0.684 0.588 0.221 n y n ruditapes2_c2664 ? 0.684 0 0.166 n y n ruditapes_c11134 ? 0.684 0 0.166 n y n ruditapes_c16256 ? 0.684 0 0.166 n y n ruditapes_c16928 ? 0.684 b-cell cll lymphoma 10 0 0.166 n y n ruditapes_c23063 ? 0.684 laminin a family protein 0 0.166 n y n ruditapes_s38097 ? 0.684 0 0.166 n y n ruditapes2_c3059 ? 0.684 0 0.165 n y n ruditapes_c27658 ? 0.684 0 0.165 n y n ruditapes2_c2006 -3.892 0.684 0.381 0.098 n y n ruditapes_c35552 -4.448 0.684 chondroitin sulfate proteoglycan 3 /// 0005488 // binding /// 0009987 // cellular process 0.34 0.076 n y n ruditapes_c10722 -4.448 0.684 0.339 0.076 n y n ruditapes_c26701 -6.671 0.684 0.265 0.04 n y n ruditapes_c7348 -6.671 0.684 0.265 0.04 n y n ruditapes_c20423 -? 0.684 0.166 0 n y n ruditapes_c26309 -? 0.684 0.166 0 n y n ruditapes_lrc39392 -? 0.684 lysozyme /// 0003824 // catalytic activity 0.166 0 n y n ruditapes_lrc38309 -? 0.684 0.165 0 n y n ruditapes_c27569 -1.136 0.685 24.097 21.211 n n n ruditapes_c15030 -1.146 0.685 21.093 18.407 n n n ruditapes2_c2288 -1.206 0.685 11.17 9.265 n n n ruditapes_c16709 1.281 0.685 4.52 5.79 n n n ruditapes2_c620 -1.483 0.685 2.695 1.818 n n n ruditapes_c13982 -1.499 0.685 2.562 1.71 n n n ruditapes_c8147 -1.581 0.685 2.052 1.298 n y n ruditapes2_c1970 1.825 0.685 0.668 1.219 n y n ruditapes_c21036 -1.631 0.685 nipsnap1 protein /// 0005739 // mitochondrion 1.822 1.117 n y n ruditapes_c8117 -1.668 0.685 1.684 1.01 n y n ruditapes2_lrc5272 -1.89 0.685 ppia protein 1.154 0.61 n y n ruditapes_c9567 2.698 0.685 amiloride binding protein 1 /// 0008144 // drug binding /// 0003824 // catalytic activity 0.208 0.562 n y n ruditapes_c20017 -2.053 0.685 0.947 0.461 n y n ruditapes_c8722 -2.053 0.685 guanine nucleotide exchange factor /// 0005089 // Rho guanyl-nucleotide exchange factor activity /// 0035023 // regulation of Rho protein signal transduction /// 0016740 // transferase activity /// 0005622 // intracellular 0.947 0.461 n y n ruditapes2_lrc7604 3.597 0.685 f-type h+-transporting atpase subunit f /// 0005811 // lipid particle 0.111 0.401 n y n ruditapes_c11357 4.497 0.685 0.074 0.332 n y n ruditapes_lrc35085 5.846 0.685 caveolin 3 /// 0006810 // transport /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0060035 // notochord cell development /// 0005515 // protein binding /// 0043234 // protein complex /// 0006469 // negative regulation of protein kinase activity /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0045214 // sarcomere organization /// 0008016 // regulation of heart contraction /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0048523 // negative regulation of cellular process /// 0045121 // membrane raft /// 0042391 // regulation of membrane potential 0.048 0.279 n y n ruditapes_c18332 -2.965 0.685 0.505 0.17 n y n ruditapes_c24079 ? 0.685 0 0.165 n y n ruditapes2_c2146 ? 0.685 di-n-acetyl- isoform cra_c /// 0003824 // catalytic activity 0 0.164 n y n ruditapes_c30375 ? 0.685 0 0.164 n y n ruditapes_c10476 -3.336 0.685 0.441 0.132 n y n ruditapes2_lrc1560 -3.336 0.685 0.44 0.132 n y n ruditapes_c18806 -3.706 0.685 0.396 0.107 n y n ruditapes_c21908 -3.706 0.685 0.395 0.107 n y n ruditapes_c22335 -3.706 0.685 0.395 0.107 n y n ruditapes_c12365 -3.706 0.685 0.395 0.106 n y n ruditapes_s32535 -3.706 0.685 0.395 0.106 n y n ruditapes_c10944 -4.448 0.685 0.339 0.076 n y n ruditapes_lrc34160 -4.448 0.685 0.338 0.076 n y n ruditapes_c11996 -4.448 0.685 dermatopontin 2 0.337 0.076 n y n ruditapes_c5806 -6.671 0.685 ubiquitin-protein partial 0.263 0.039 n y n ruditapes_lrc34926 -6.671 0.685 0.263 0.039 n y n ruditapes_c10792 -8.895 0.685 0.234 0.026 n y n ruditapes_c17642 -? 0.685 0.165 0 n y n ruditapes_lrc31801 -? 0.685 0.165 0 n y n ruditapes_c27190 -1.267 0.686 6.986 5.514 n n n ruditapes_c1678 -1.301 0.686 5.709 4.388 n n n ruditapes_c8292 -1.33 0.686 4.894 3.68 n n n ruditapes2_c2996 1.434 0.686 2.037 2.92 n n n ruditapes2_c807 -1.38 0.686 clathrin coat assembly protein ap19 /// 0040007 // growth /// 0002119 // nematode larval development /// 0030131 // clathrin adaptor complex /// 0008021 // synaptic vesicle /// 0006886 // intracellular protein transport /// 0000003 // reproduction /// 0005515 // protein binding /// 0040011 // locomotion /// 0030130 // clathrin coat of trans-Golgi network vesicle /// 0008565 // protein transporter activity /// 0016183 // synaptic vesicle coating /// 0009792 // embryonic development ending in birth or egg hatching 3.881 2.814 n n n ruditapes_c27392 -1.39 0.686 3.729 2.683 n n n ruditapes_c21761 1.466 0.686 1.793 2.629 n n n ruditapes_c17216 -1.411 0.686 3.42 2.424 n n n ruditapes_lrc38209 1.614 0.686 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 1.101 1.777 n y n ruditapes_c4468 -1.492 0.686 hypothetical protein [Schistosoma mansoni] 2.601 1.743 n n n ruditapes_c11054 -1.578 0.686 2.053 1.301 n y n ruditapes_c24437 1.927 0.686 0.546 1.052 n y n ruditapes_c8335 1.949 0.686 0.527 1.026 n y n ruditapes2_c1124 -1.69 0.686 inhibitor of growth member 5 /// 0008285 // negative regulation of cell proliferation /// 0006473 // protein amino acid acetylation /// 0045926 // negative regulation of growth /// 0005515 // protein binding 1.598 0.945 n y n ruditapes_c14896 2.024 0.686 taf1 protein /// 0005488 // binding 0.465 0.941 n y n ruditapes_c20504 -1.705 0.686 1.558 0.914 n y n ruditapes_lrc33838 2.099 0.686 coiled-coil-helix-coiled-coil-helix domain containing 3 /// 0005739 // mitochondrion 0.414 0.868 n y n ruditapes_lrc38516 2.184 0.686 0.364 0.796 n y n ruditapes_c8664 -1.771 0.686 1.381 0.78 n y n ruditapes_lrc34620 -2.076 0.686 0.919 0.443 n y n ruditapes_c25152 3.373 0.686 0.126 0.425 n y n ruditapes_c30582 -2.541 0.686 0.626 0.246 n y n ruditapes_c15406 ? 0.686 0 0.164 n y n ruditapes2_lrc5206 ? 0.686 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0.163 n y n ruditapes_c10421 ? 0.686 hypothetical protein BRAFLDRAFT_118373 [Branchiostoma floridae] 0 0.163 n y n ruditapes_c16264 ? 0.686 0 0.163 n y n ruditapes2_c2199 -3.706 0.686 0.393 0.106 n y n ruditapes_c19991 -3.706 0.686 0.392 0.106 n y n ruditapes_c8012 -3.706 0.686 0.392 0.106 n y n ruditapes_c28915 -4.448 0.686 0.335 0.075 n y n ruditapes_c14031 -? 0.686 0.164 0 n y n ruditapes_c22868 -? 0.686 0.163 0 n y n ruditapes_lrc37373 -? 0.686 0.163 0 n y n ruditapes_lrc32298 -1.107 0.687 nascent polypeptide-associated complex subunit alpha /// 0003713 // transcription coactivator activity /// 0006350 // transcription /// 0005634 // nucleus /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0016787 // hydrolase activity /// 0017025 // TATA-binding protein binding 38.017 34.341 n n n ruditapes_c8058 1.182 0.687 9.874 11.669 n n n ruditapes_c2942 -1.23 0.687 calmodulin /// 0005516 // calmodulin binding /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005634 // nucleus /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0004721 // phosphoprotein phosphatase activity /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008270 // zinc ion binding /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005506 // iron ion binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding /// 0016301 // kinase activity 8.97 7.291 n n n ruditapes2_lrc5314 -1.278 0.687 6.445 5.041 n n n ruditapes2_lrc7506 -1.368 0.687 4.055 2.963 n n n ruditapes_c16691 -1.466 0.687 2.791 1.904 n n n ruditapes2_c2718 1.686 0.687 0.905 1.526 n y n ruditapes_c30007 1.754 0.687 0.772 1.353 n y n ruditapes_c966 -1.668 0.687 1.66 0.995 n y n ruditapes_c13033 -1.668 0.687 1.657 0.994 n y n ruditapes_lrc14353 -1.74 0.687 1.444 0.83 n y n ruditapes_c21602 -1.747 0.687 1.432 0.82 n y n ruditapes_c9516 -1.779 0.687 family with sequence similarity member a 1.35 0.759 n y n ruditapes_c16371 3.597 0.687 regulator of g-protein signalling 12 /// 0009987 // cellular process 0.11 0.394 n y n ruditapes2_c1247 4.497 0.687 tempt_aplca ame: full=temptin flags: precursor 0.072 0.326 n y n ruditapes_c29804 -2.383 0.687 0.694 0.291 n y n ruditapes_c9591 -2.859 0.687 0.522 0.183 n y n ruditapes_c31609 ? 0.687 0 0.163 n y n ruditapes_lrc38458 ? 0.687 0 0.163 n y n ruditapes2_c1672 ? 0.687 complement c1q-like protein 4 precursor 0 0.162 n y n ruditapes_c26291 -4.448 0.687 0.334 0.075 n y n ruditapes_c29785 -5.559 0.687 0.287 0.052 n y n ruditapes_c25542 -6.671 0.687 0.26 0.039 n y n ruditapes_c22945 -8.895 0.687 0.23 0.026 n y n ruditapes_c16493 -8.895 0.687 0.229 0.026 n y n ruditapes_c13898 -? 0.687 0.163 0 n y n ruditapes_c21087 -? 0.687 0.163 0 n y n ruditapes_c21858 -? 0.687 0.163 0 n y n ruditapes_c28369 -? 0.687 0.163 0 n y n ruditapes_c12844 -? 0.687 0.162 0 n y n ruditapes_c13615 -? 0.687 0.162 0 n y n ruditapes_c17506 -? 0.687 0.162 0 n y n ruditapes_c19071 -? 0.687 0.162 0 n y n ruditapes_c3023 -? 0.687 0.162 0 n y n ruditapes_c5832 -? 0.687 0.162 0 n y n ruditapes_s37522 -? 0.687 elegans protein confirmed by transcript evidence /// 0005515 // protein binding 0.162 0 n y n ruditapes_s39438 -? 0.687 0.162 0 n y n ruditapes_lrc11502 1.12 0.688 20.973 23.497 n n n ruditapes_c1257 1.147 0.688 cathepsin k /// 0008234 // cysteine-type peptidase activity /// 0005515 // protein binding 14.646 16.795 n n n ruditapes_c20219 -1.205 0.688 10.969 9.101 n n n ruditapes_c11590 1.331 0.688 3.271 4.355 n n n ruditapes_c1845 -1.355 0.688 4.279 3.159 n n n ruditapes2_c574 1.495 0.688 1.59 2.377 n n n ruditapes_c21655 -1.445 0.688 2.978 2.06 n n n ruditapes2_lrc3346 -1.474 0.688 2.705 1.836 n n n ruditapes_c10501 -1.573 0.688 2.044 1.3 n y n ruditapes_lrc35394 -1.581 0.688 2.009 1.27 n y n ruditapes_c31696 1.825 0.688 0.657 1.198 n y n ruditapes2_c2019 -1.656 0.688 cytochrome family subfamily polypeptide 1 "/// 0005488 // binding /// 0004497 // monooxygenase activity /// 0006631 // fatty acid metabolic process /// 0044464 // cell part /// 0016705 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen" 1.695 1.023 n y n ruditapes_c15144 2.099 0.688 hypothetical protein BRAFLDRAFT_94883 [Branchiostoma floridae] 0.407 0.855 n y n ruditapes_c8540 2.12 0.688 0.394 0.834 n y n ruditapes_lrc17898 -1.74 0.688 1.432 0.823 n y n ruditapes_c13792 2.248 0.688 0.331 0.745 n y n ruditapes_lrc39240 -2.001 0.688 40s ribosomal protein s8 /// 0044424 // intracellular part 0.986 0.493 n y n ruditapes2_c2605 2.998 0.688 sialic acid-binding lectin 0.16 0.48 n y n ruditapes2_lrc7307 3.597 0.688 0.109 0.393 n y n ruditapes_c29561 4.497 0.688 0.072 0.324 n y n ruditapes_lrc32155 -2.395 0.688 0.681 0.285 n y n ruditapes_c21939 -2.594 0.688 0.599 0.231 n y n ruditapes2_c1959 -2.891 0.688 tctex1d1 protein 0.513 0.177 n y n ruditapes_c17781 ? 0.688 0 0.162 n y n ruditapes_c24660 ? 0.688 0 0.162 n y n ruditapes2_lrc4142 ? 0.688 developmentally-regulated vdg3 0 0.161 n y n ruditapes_c16552 ? 0.688 0 0.161 n y n ruditapes_c24024 ? 0.688 0 0.161 n y n ruditapes_c25571 ? 0.688 baculoviral iap repeat-containing 3 /// 0014070 // response to organic cyclic substance /// 0007166 // cell surface receptor linked signal transduction /// 0001890 // placenta development /// 0001741 // XY body /// 0045471 // response to ethanol /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity /// 0051591 // response to cAMP /// 0010243 // response to organic nitrogen 0 0.161 n y n ruditapes_c28611 ? 0.688 0 0.161 n y n ruditapes_c30487 ? 0.688 0 0.161 n y n ruditapes_c21258 -3.706 0.688 0.388 0.105 n y n ruditapes_c9130 -3.706 0.688 0.387 0.105 n y n ruditapes_c24007 -? 0.688 0.161 0 n y n ruditapes_c16965 -1.197 0.689 11.771 9.835 n n n ruditapes_c13073 -1.233 0.689 8.66 7.023 n n n ruditapes2_c2044 1.298 0.689 apolipoprotein d /// 0005515 // protein binding /// 0005622 // intracellular 3.943 5.117 n n n ruditapes2_c1869 -1.28 0.689 frizzled homolog 9 /// 0016055 // Wnt receptor signaling pathway /// 0007405 // neuroblast proliferation /// 0042813 // Wnt receptor activity /// 0007611 // learning or memory 6.274 4.9 n n n ruditapes_c12274 1.376 0.689 2.597 3.573 n n n ruditapes_lrc32737 1.437 0.689 apextrin 1.978 2.842 n n n ruditapes_c9335 -1.445 0.689 2.95 2.041 n n n ruditapes_c23155 -1.472 0.689 2.708 1.839 n n n ruditapes_c11583 -1.593 0.689 1.932 1.212 n y n ruditapes_c24418 -1.701 0.689 1.539 0.905 n y n ruditapes_c22162 2.158 0.689 0.37 0.799 n y n ruditapes_c30048 -1.779 0.689 1.334 0.75 n y n ruditapes_c10778 -1.946 0.689 deoxyribonuclease i-like 3 /// 0004536 // deoxyribonuclease activity /// 0004519 // endonuclease activity /// 0005488 // binding /// 0009987 // cellular process 1.049 0.539 n y n ruditapes_c20001 2.923 0.689 2310004n24rik protein 0.168 0.491 n y n ruditapes_c17541 -2.541 0.689 0.614 0.241 n y n ruditapes_lrc35794 -2.594 0.689 calcium-binding ef-hand domain protein 0.594 0.229 n y n ruditapes_c11955 ? 0.689 0 0.16 n y n ruditapes_c18782 ? 0.689 0 0.16 n y n ruditapes_c23708 ? 0.689 0 0.16 n y n ruditapes_c23924 ? 0.689 GF14121 [Drosophila ananassae] 0 0.16 n y n ruditapes_c30537 ? 0.689 0 0.16 n y n ruditapes_c30837 ? 0.689 0 0.16 n y n ruditapes_c38578 ? 0.689 macrophage migration inhibitory factor 2 0 0.16 n y n ruditapes_c29611 -3.058 0.689 tyrosine kinase partial 0.473 0.155 n y n ruditapes_lrc33064 -4.448 0.689 0.329 0.074 n y n ruditapes_c25252 -5.559 0.689 0.283 0.051 n y n ruditapes_c15752 -6.671 0.689 leucine zipper containing transcription 0.256 0.038 n y n ruditapes_lrc36722 -6.671 0.689 ubiquinol-cytochrome c reductase hinge protein /// 0009060 // aerobic respiration /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain /// 0008121 // ubiquinol-cytochrome-c reductase activity 0.256 0.038 n y n ruditapes_lrc35951 -8.895 0.689 0.228 0.026 n y n ruditapes_c4200 -11.119 0.689 universal stress protein 0.211 0.019 n y n ruditapes_c15379 -? 0.689 0.16 0 n y n ruditapes_c15947 -? 0.689 0.16 0 n y n ruditapes_c17989 -? 0.689 0.16 0 n y n ruditapes_c21362 -? 0.689 0.16 0 n y n ruditapes_c25948 -? 0.689 0.16 0 n y n ruditapes_c29397 -? 0.689 0.16 0 n y n ruditapes_lrc37305 -? 0.689 0.16 0 n y n ruditapes_s36716 -? 0.689 0.16 0 n y n ruditapes_c26220 1.269 0.69 4.699 5.964 n n n ruditapes2_c38 -1.269 0.69 alpha-glucosidase 6.717 5.295 n n n ruditapes_lrc28583 1.315 0.69 60s ribosomal protein l23 /// 0005730 // nucleolus /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.526 4.639 n n n ruditapes_lrc9074 -1.379 0.69 3.773 2.736 n n n ruditapes_c22741 1.449 0.69 1.866 2.703 n n n ruditapes_c29542 -1.399 0.69 3.495 2.498 n n n ruditapes_c22529 -1.483 0.69 2.6 1.754 n n n ruditapes_c24690 1.754 0.69 0.752 1.319 n y n ruditapes_c25726 -1.705 0.69 1.516 0.889 n y n ruditapes_c9418 2.248 0.69 complement component q subcomponent-like 4 0.327 0.735 n y n ruditapes2_lrc3058 -1.791 0.69 1.298 0.724 n y n ruditapes_c18066 -1.873 0.69 1.145 0.611 n y n ruditapes_c18166 -2.053 0.69 0.913 0.445 n y n ruditapes_lrc39211 3.597 0.69 tandem repeat galectin 0.108 0.388 n y n ruditapes_c36871 5.396 0.69 proteasome ( macropain) beta 1 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 0.052 0.282 n y n ruditapes_c25657 -2.502 0.69 0.628 0.251 n y n ruditapes_c10695 ? 0.69 0 0.159 n y n ruditapes_c18612 ? 0.69 0 0.159 n y n ruditapes_lrc35814 ? 0.69 0 0.159 n y n ruditapes_c28158 -3.706 0.69 0.382 0.103 n y n ruditapes_c9876 -4.448 0.69 0.327 0.074 n y n ruditapes_c30801 -4.448 0.69 0.326 0.073 n y n ruditapes_lrc11986 -5.93 0.69 0.271 0.046 n y n ruditapes_c31325 -6.671 0.69 0.255 0.038 n y n ruditapes_c20293 -? 0.69 0.159 0 n y n ruditapes_c2750 -1.169 0.691 15.28 13.069 n n n ruditapes_c17105 -1.182 0.691 PREDICTED: hypothetical protein [Monodelphis domestica] 13.414 11.351 n n n ruditapes_c7148 1.217 0.691 6.958 8.464 n n n ruditapes_c14251 1.255 0.691 5.192 6.514 n n n ruditapes2_c5475 -1.274 0.691 connective tissue growth factor 6.442 5.056 n n n ruditapes2_c1300 -1.341 0.691 4.481 3.342 n n n ruditapes_c8053 -1.366 0.691 3.975 2.909 n n n ruditapes_c11466 -1.38 0.691 lipoic acid synthetase "/// 0005739 // mitochondrion /// 0016992 // lipoate synthase activity /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0009107 // lipoate biosynthetic process /// 0005506 // iron ion binding /// 0017140 // lipoic acid synthase activity" 3.731 2.703 n n n ruditapes_c8069 -1.534 0.691 2.218 1.446 n y n ruditapes_c31662 -1.588 0.691 1.931 1.216 n y n ruditapes_lrc36310 2.069 0.691 nadh dehydrogenase 1 alpha beta subcomplex 0.417 0.862 n y n ruditapes_c16245 -1.796 0.691 1.282 0.714 n y n ruditapes_c8433 -1.837 0.691 hemopoietic cell kinase /// 0040007 // growth /// 0002119 // nematode larval development /// 0008406 // gonad development /// 0005515 // protein binding /// 0040011 // locomotion /// 0040035 // hermaphrodite genitalia development /// 0004672 // protein kinase activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 1.2 0.653 n y n ruditapes_c13703 -2.1 0.691 thyrotropin-releasing hormone receptor 0.867 0.413 n y n ruditapes_lrc13461 3.597 0.691 0.107 0.385 n y n ruditapes2_lrc4236 -2.383 0.691 0.674 0.283 n y n ruditapes2_c1010 ? 0.691 0 0.158 n y n ruditapes2_c720 ? 0.691 complement component c6 0 0.158 n y n ruditapes_c13187 ? 0.691 0 0.158 n y n ruditapes_c23317 ? 0.691 membrane-bound transcription factor site 1 /// 0044237 // cellular metabolic process /// 0005634 // nucleus /// 0006629 // lipid metabolic process /// 0005795 // Golgi stack /// 0004252 // serine-type endopeptidase activity /// 0042990 // regulation of transcription factor import into nucleus 0 0.158 n y n ruditapes_c29107 ? 0.691 hypothetical protein NEMVEDRAFT_v1g222147 [Nematostella vectensis] 0 0.158 n y n ruditapes_c30315 ? 0.691 0 0.158 n y n ruditapes_lrc20590 ? 0.691 dopamine beta hydroxylase-like protein 0 0.158 n y n ruditapes_s35775 ? 0.691 ribosomal protein s26 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 0 0.158 n y n ruditapes2_lrc6290 ? 0.691 nadh dehydrogenase 1 alpha 5 0 0.157 n y n ruditapes_c21524 ? 0.691 0 0.157 n y n ruditapes_lrc16350 ? 0.691 0 0.157 n y n ruditapes_c21748 -4.448 0.691 0.324 0.073 n y n ruditapes_s40242 -6.671 0.691 0.252 0.038 n y n ruditapes_c11730 -? 0.691 0.158 0 n y n ruditapes_c19338 -? 0.691 0.158 0 n y n ruditapes_c27248 -? 0.691 0.158 0 n y n ruditapes_lrc36668 -? 0.691 histone h2a /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0000786 // nucleosome 0.158 0 n y n ruditapes_c15360 -? 0.691 0.157 0 n y n ruditapes_c24415 -? 0.691 0.157 0 n y n ruditapes2_c1094 -1.058 0.692 131.006 123.828 n n n ruditapes_c7325 1.163 0.692 11.772 13.686 n n n ruditapes_c12961 -1.21 0.692 10.21 8.436 n n n ruditapes_c11067 -1.273 0.692 6.46 5.074 n n n ruditapes2_c577 -1.284 0.692 subfamily member 13 /// 0006915 // apoptosis /// 0007283 // spermatogenesis 6.022 4.689 n n n ruditapes2_c1926 1.314 0.692 3.499 4.599 n n n ruditapes_c9146 -1.347 0.692 exosome component 4 /// 0000175 // 3'-5'-exoribonuclease activity /// 0005730 // nucleolus /// 0005515 // protein binding /// 0006364 // rRNA processing /// 0005737 // cytoplasm /// 0003723 // RNA binding /// 0009022 // tRNA nucleotidyltransferase activity /// 0000178 // exosome (RNase complex) 4.306 3.197 n n n ruditapes_c4548 -1.499 0.692 heat shock protein alpha class a member 1 /// 0005524 // ATP binding /// 0006986 // response to unfolded protein /// 0042470 // melanosome /// 0030235 // nitric-oxide synthase regulator activity /// 0045429 // positive regulation of nitric oxide biosynthetic process /// 0005829 // cytosol /// 0034619 // cellular chaperone-mediated protein complex assembly /// 0030911 // TPR domain binding /// 0070096 // mitochondrial outer membrane translocase complex assembly /// 0042026 // protein refolding /// 0045585 // positive regulation of cytotoxic T cell differentiation /// 0051082 // unfolded protein binding /// 0042803 // protein homodimerization activity 2.449 1.634 n n n ruditapes_c3610 -1.606 0.692 1.84 1.145 n y n ruditapes2_c3843 -1.668 0.692 calcium binding protein 1 1.604 0.961 n y n ruditapes_c13424 -1.69 0.692 1.541 0.912 n y n ruditapes_c16466 -1.831 0.692 1.207 0.659 n y n ruditapes_c27232 -1.977 0.692 0.983 0.497 n y n ruditapes2_c5478 -2.038 0.692 sarcoplasmic calcium-binding protein 0.919 0.451 n y n ruditapes_c26540 -2.224 0.692 0.764 0.344 n y n ruditapes_lrc35601 4.047 0.692 serine proteases and ovochymase regions /// 0016787 // hydrolase activity 0.085 0.343 n y n ruditapes_lrc39279 4.497 0.692 ribosomal protein s8 0.07 0.315 n y n ruditapes_lrc29541 -2.471 0.692 chromosome 6 open reading frame 130 0.63 0.255 n y n ruditapes2_c3116 ? 0.692 pr-5-like protein 0 0.157 n y n ruditapes_c11018 ? 0.692 0 0.157 n y n ruditapes_c16428 ? 0.692 0 0.157 n y n ruditapes_c16529 ? 0.692 kallmann syndrome 1 sequence /// 0005576 // extracellular region /// 0009987 // cellular process 0 0.157 n y n ruditapes_c24160 ? 0.692 0 0.157 n y n ruditapes_lrc7999 ? 0.692 0 0.157 n y n ruditapes_c16910 ? 0.692 allatostatin receptor 0 0.156 n y n ruditapes_c21464 ? 0.692 0 0.156 n y n ruditapes_s39423 ? 0.692 cathepsin l-like protease 0 0.156 n y n ruditapes_c18477 -4.448 0.692 0.322 0.072 n y n ruditapes_c3943 -4.448 0.692 0.322 0.072 n y n ruditapes_lrc37343 -4.448 0.692 0.322 0.072 n y n ruditapes_c14403 -5.559 0.692 0.278 0.05 n y n ruditapes_c24420 -6.671 0.692 0.251 0.038 n y n ruditapes_c14822 -? 0.692 0.157 0 n y n ruditapes_c20149 -? 0.692 0.157 0 n y n ruditapes_c20236 -? 0.692 0.157 0 n y n ruditapes_c20989 -? 0.692 0.157 0 n y n ruditapes_c2532 -? 0.692 antimicrobial peptide hydramacin 0.157 0 n y n ruditapes_c26268 -? 0.692 hypothetical protein BRAFLDRAFT_66631 [Branchiostoma floridae] 0.157 0 n y n ruditapes_lrc22099 -? 0.692 0.157 0 n y n ruditapes_c17306 1.271 0.693 4.573 5.813 n n n ruditapes_c28265 -1.341 0.693 4.39 3.273 n n n ruditapes_c11588 1.505 0.693 1.482 2.232 n y n ruditapes_c25478 1.559 0.693 1.24 1.933 n y n ruditapes_s39946 1.949 0.693 0.502 0.979 n y n ruditapes_c18867 2.069 0.693 0.411 0.851 n y n ruditapes_c17663 -1.946 0.693 1.019 0.524 n y n ruditapes_c16274 -1.99 0.693 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.962 0.483 n y n ruditapes_c23783 4.047 0.693 pol polyprotein 0.084 0.34 n y n ruditapes_c16153 ? 0.693 0 0.156 n y n ruditapes_c1927 ? 0.693 0 0.156 n y n ruditapes_c22691 ? 0.693 0 0.155 n y n ruditapes_lrc12668 ? 0.693 0 0.155 n y n ruditapes_c15203 -3.113 0.693 0.45 0.145 n y n ruditapes_c18174 -4.448 0.693 0.32 0.072 n y n ruditapes_c21636 -4.448 0.693 0.32 0.072 n y n ruditapes_s37787 -4.448 0.693 cytochrome c oxidase subunit via polypeptide 1 0.319 0.072 n y n ruditapes_c23956 -6.671 0.693 0.249 0.037 n y n ruditapes_c26513 -6.671 0.693 c-type lectin 0.249 0.037 n y n ruditapes2_c2892 -? 0.693 0.156 0 n y n ruditapes_c16891 -? 0.693 0.156 0 n y n ruditapes_c18883 -? 0.693 0.156 0 n y n ruditapes_c9648 -? 0.693 0.156 0 n y n ruditapes_lrc39070 -? 0.693 transport protein sec61 subunit gamma /// 0005789 // endoplasmic reticulum membrane /// 0006886 // intracellular protein transport /// 0016021 // integral to membrane /// 0008565 // protein transporter activity 0.156 0 n y n ruditapes_s36022 -? 0.693 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0.156 0 n y n ruditapes_c18469 -1.251 0.694 7.344 5.871 n n n ruditapes_c14843 -1.3 0.694 5.386 4.142 n n n ruditapes_c3399 -1.323 0.694 translocon-associated protein subunit gamma /// 0005515 // protein binding /// 0030176 // integral to endoplasmic reticulum membrane /// 0005048 // signal sequence binding /// 0006613 // cotranslational protein targeting to membrane /// 0005792 // microsome /// 0005784 // translocon complex /// 0004872 // receptor activity 4.789 3.621 n n n ruditapes_c11240 1.51 0.694 hypothetical protein TRIADDRAFT_61255 [Trichoplax adhaerens] 1.453 2.194 n y n ruditapes_c10026 1.574 0.694 oxidoreductase 1.175 1.849 n y n ruditapes_c22821 1.699 0.694 0.836 1.42 n y n ruditapes_c14665 -1.563 0.694 2.023 1.294 n y n ruditapes_c20809 -1.779 0.694 1.289 0.725 n y n ruditapes_c25199 -1.779 0.694 1.286 0.723 n y n ruditapes_c16868 -1.8 0.694 protein 1.249 0.694 n y n ruditapes_c19023 -1.946 0.694 1.013 0.521 n y n ruditapes2_c621 -2.038 0.694 0.902 0.443 n y n ruditapes_c22612 -2.78 0.694 0.518 0.186 n y n ruditapes_c6244 -2.78 0.694 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 0.518 0.186 n y n ruditapes2_c2282 ? 0.694 hypothetical protein BRAFLDRAFT_130779 [Branchiostoma floridae] 0 0.155 n y n ruditapes_c10646 ? 0.694 0 0.155 n y n ruditapes_c28979 ? 0.694 0 0.155 n y n ruditapes_c9883 ? 0.694 0 0.155 n y n ruditapes_c18736 ? 0.694 cathepsin s /// 0008233 // peptidase activity 0 0.154 n y n ruditapes_lrc28214 -4.448 0.694 0.317 0.071 n y n ruditapes_c24621 -6.671 0.694 0.247 0.037 n y n ruditapes_lrc33668 -8.895 0.694 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 0.219 0.025 n y n ruditapes_c31469 -11.119 0.694 0.204 0.018 n y n ruditapes2_c2257 -? 0.694 0.155 0 n y n ruditapes2_lrc7014 -? 0.694 0.155 0 n y n ruditapes_c13885 -? 0.694 0.155 0 n y n ruditapes_c17921 -? 0.694 0.155 0 n y n ruditapes_c19467 -? 0.694 0.155 0 n y n ruditapes_c23030 -? 0.694 0.155 0 n y n ruditapes_c6382 -? 0.694 0.155 0 n y n ruditapes_s37188 -? 0.694 0.155 0 n y n ruditapes_c22493 -? 0.694 0.154 0 n y n ruditapes_lrc31548 -1.176 0.695 ribosomal protein l4 /// 0044424 // intracellular part 13.916 11.837 n n n ruditapes2_c3727 -1.178 0.695 plasma kallikrein b1 precursor 13.538 11.491 n n n ruditapes_c837 -1.187 0.695 12.4 10.446 n n n ruditapes_c24151 1.291 0.695 3.969 5.123 n n n ruditapes_c23156 -1.328 0.695 4.618 3.476 n n n ruditapes_c14965 -1.351 0.695 4.155 3.075 n n n ruditapes_c12527 -1.483 0.695 2.511 1.694 n n n ruditapes_lrc32256 -1.561 0.695 actin /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0000281 // cytokinesis after mitosis /// 0005856 // cytoskeleton /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0009792 // embryonic development ending in birth or egg hatching 2.018 1.293 n y n ruditapes_c16546 -1.617 0.695 1.76 1.088 n y n ruditapes_c583 1.868 0.695 0.573 1.07 n y n ruditapes_c3130 2.024 0.695 0.436 0.882 n y n ruditapes_c12369 -1.764 0.695 1.317 0.746 n y n ruditapes_s39206 -1.779 0.695 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 1.278 0.719 n y n ruditapes_c24840 -1.819 0.695 1.201 0.66 n y n ruditapes_c29283 -1.853 0.695 1.138 0.614 n y n ruditapes_c7585 2.698 0.695 btb poz domain-containing protein /// 0016020 // membrane 0.194 0.524 n y n ruditapes_c11647 4.497 0.695 0.069 0.309 n y n ruditapes_c16784 -2.594 0.695 0.57 0.22 n y n ruditapes_c13212 ? 0.695 0 0.154 n y n ruditapes_c27336 ? 0.695 0 0.154 n y n ruditapes_c30130 ? 0.695 0 0.154 n y n ruditapes_c7559 ? 0.695 0 0.154 n y n ruditapes_c9794 ? 0.695 family protein 0 0.154 n y n ruditapes_lrc35974 ? 0.695 0 0.154 n y n ruditapes_s37379 ? 0.695 0 0.154 n y n ruditapes_c14989 -3.113 0.695 0.446 0.143 n y n ruditapes_c18119 -3.706 0.695 0.37 0.1 n y n ruditapes_c31319 -13.343 0.695 0.194 0.015 n y n ruditapes2_c690 -? 0.695 0.154 0 n y n ruditapes2_c2269 -? 0.695 arylsulfatase j /// 0004065 // arylsulfatase activity 0.153 0 n y n ruditapes_c22448 -1.216 0.696 9.421 7.746 n n n ruditapes_c11652 -1.23 0.696 8.399 6.825 n n n ruditapes_c11531 1.26 0.696 4.794 6.042 n n n ruditapes_c17122 -1.285 0.696 gm2 ganglioside activator 5.848 4.552 n n n ruditapes2_c843 1.33 0.696 3.122 4.151 n n n ruditapes_c7948 -1.303 0.696 5.273 4.048 n n n ruditapes_c29824 -1.363 0.696 3.897 2.859 n n n ruditapes2_c5242 -1.421 0.696 bcl2-like 1 /// 0051239 // regulation of multicellular organismal process /// 0014070 // response to organic cyclic substance /// 0060255 // regulation of macromolecule metabolic process /// 0006996 // organelle organization /// 0040007 // growth /// 0006952 // defense response /// 0008283 // cell proliferation /// 0005634 // nucleus /// 0043065 // positive regulation of apoptosis /// 0006916 // anti-apoptosis /// 0042802 // identical protein binding /// 0009725 // response to hormone stimulus /// 0051179 // localization /// 0044260 // cellular macromolecule metabolic process /// 0012505 // endomembrane system /// 0048468 // cell development /// 0009314 // response to radiation /// 0051704 // multi-organism process /// 0007276 // gamete generation /// 0030003 // cellular cation homeostasis /// 0009653 // anatomical structure morphogenesis /// 0050790 // regulation of catalytic activity /// 0030097 // hemopoiesis /// 0006955 // immune response /// 0042113 // B cell activation /// 0046983 // protein dimerization activity /// 0010038 // response to metal ion /// 0043393 // regulation of protein binding /// 0043279 // response to alkaloid /// 0032845 // negative regulation of homeostatic process /// 0031966 // mitochondrial membrane 3.078 2.166 n n n ruditapes2_c22 -1.435 0.696 2.939 2.048 n n n ruditapes_c9091 1.574 0.696 1.158 1.822 n y n ruditapes_c27045 -1.483 0.696 2.502 1.688 n n n ruditapes2_c3496 1.754 0.696 0.726 1.273 n y n ruditapes_c31213 -1.69 0.696 1.499 0.887 n y n ruditapes_c17516 -1.853 0.696 zgc:55448 protein 1.135 0.612 n y n ruditapes_c1586 -2.012 0.696 zinc carboxypeptidase a 1 0.918 0.456 n y n ruditapes_c25196 -2.224 0.696 0.744 0.334 n y n ruditapes_lrc38361 4.047 0.696 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0.082 0.333 n y n ruditapes2_c2470 5.846 0.696 0.044 0.259 n y n ruditapes_c3930 5.846 0.696 0.044 0.258 n y n ruditapes_s36464 -2.669 0.696 0.541 0.203 n y n ruditapes_c12789 ? 0.696 0 0.153 n y n ruditapes_c25390 ? 0.696 GK21346 [Drosophila willistoni] 0 0.153 n y n ruditapes_c26441 ? 0.696 protein 0 0.153 n y n ruditapes_c38238 ? 0.696 countin-like protein 0 0.153 n y n ruditapes_lrc34294 ? 0.696 0 0.153 n y n ruditapes_s39350 -3.336 0.696 ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003735 // structural constituent of ribosome 0.408 0.122 n y n ruditapes_c11538 -? 0.696 0.153 0 n y n ruditapes_c17698 -? 0.696 0.153 0 n y n ruditapes_c17771 -? 0.696 0.153 0 n y n ruditapes_c21352 -? 0.696 0.153 0 n y n ruditapes_c30356 -? 0.696 0.153 0 n y n ruditapes_lrc35091 -? 0.696 0.153 0 n y n ruditapes2_c981 1.095 0.697 30.419 33.314 n n n ruditapes2_c1395 -1.177 0.697 13.436 11.412 n n n ruditapes_c30754 -1.196 0.697 11.251 9.41 n n n ruditapes_c5196 1.213 0.697 6.914 8.388 n n n ruditapes_c14250 1.241 0.697 5.5 6.826 n n n ruditapes_c11712 -1.281 0.697 5.893 4.599 n n n ruditapes2_c1438 -1.3 0.697 nadh dehydrogenase 5.326 4.099 n n n ruditapes2_c2867 1.331 0.697 3.068 4.085 n n n ruditapes_c15937 -1.305 0.697 5.152 3.949 n n n ruditapes_c27981 -1.396 0.697 3.351 2.4 n n n ruditapes_c332 -1.578 0.697 1.9 1.204 n y n ruditapes_c7647 1.799 0.697 galactose-specific c-type 0.653 1.174 n y n ruditapes_c14491 -1.647 0.697 1.625 0.987 n y n ruditapes_c9630 -1.657 0.697 universal stress protein 1.587 0.958 n y n ruditapes2_lrc3076 -1.73 0.697 1.373 0.794 n y n ruditapes_c16307 -1.8 0.697 1.216 0.676 n y n ruditapes_c37712 -1.807 0.697 glutathione s-transferase mu /// 0016740 // transferase activity 1.204 0.667 n y n ruditapes2_c1096 -1.994 0.697 tnf superfamily ligand tl1a 0.934 0.468 n y n ruditapes2_lrc3822 -2.001 0.697 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0.928 0.464 n y n ruditapes_c16649 3.148 0.697 thiosulfate sulfurtransferase 0.135 0.426 n y n ruditapes_c27873 3.597 0.697 0.103 0.369 n y n ruditapes_c26510 -2.224 0.697 0.74 0.333 n y n ruditapes_c16035 -2.224 0.697 0.739 0.332 n y n ruditapes_c22987 -2.224 0.697 chromosome 14 open reading frame 143 0.736 0.331 n y n ruditapes_c10839 -2.426 0.697 0.629 0.259 n y n ruditapes_lrc35162 -2.426 0.697 ependymin related protein-1 precursor 0.629 0.259 n y n ruditapes_s36531 -2.78 0.697 26s protease regulatory subunit 6b /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0043234 // protein complex /// 0001824 // blastocyst development /// 0017111 // nucleoside-triphosphatase activity /// 0044424 // intracellular part 0.51 0.183 n y n ruditapes_c13675 ? 0.697 0 0.152 n y n ruditapes_c15311 ? 0.697 0 0.152 n y n ruditapes_c19651 ? 0.697 0 0.152 n y n ruditapes_c26504 ? 0.697 0 0.152 n y n ruditapes_c6782 ? 0.697 0 0.152 n y n ruditapes_c13090 ? 0.697 0 0.151 n y n ruditapes_c13441 ? 0.697 cadherin- isoform j "/// 0035262 // gonad morphogenesis /// 0030175 // filopodium /// 0048846 // axon extension involved in axon guidance /// 0005914 // spot adherens junction /// 0042078 // germ-line stem cell division /// 0043296 // apical junction complex /// 0010004 // gastrulation involving germ band extension /// 0035019 // somatic stem cell maintenance /// 0016339 // calcium-dependent cell-cell adhesion /// 0007413 // axonal fasciculation /// 0008258 // head involution /// 0030708 // germarium-derived female germ-line cyst encapsulation /// 0035160 // maintenance of epithelial integrity, open tracheal system /// 0030720 // oocyte localization during germarium-derived egg chamber formation /// 0005515 // protein binding /// 0007412 // axon target recognition /// 0016021 // integral to membrane /// 0031290 // retinal ganglion cell axon guidance /// 0007506 // gonadal mesoderm development /// 0007420 // brain development /// 0035147 // branch fusion, open tracheal system /// 0001748 // optic lobe placode development /// 0045186 // zonula adherens assembly /// 0007507 // heart development /// 0016318 // ommatidial rotation /// 0048103 // somatic stem cell division /// 0007280 // pole cell migration /// 0030031 // cell projection assembly /// 0007435 // salivary gland morphogenesis /// 0007156 // homophilic cell adhesion /// 0007298 // border follicle cell migration /// 0045176 // apical protein localization /// 0050774 // negative regulation of dendrite morphogenesis" 0 0.151 n y n ruditapes_c13805 ? 0.697 0 0.151 n y n ruditapes_c30485 ? 0.697 0 0.151 n y n ruditapes_c31011 ? 0.697 0 0.151 n y n ruditapes_c5787 ? 0.697 0 0.151 n y n ruditapes_lrc31287 ? 0.697 0 0.151 n y n ruditapes2_lrc6042 -3.336 0.697 0.406 0.122 n y n ruditapes_c11820 -6.671 0.697 0.242 0.036 n y n ruditapes_c8403 -6.671 0.697 0.242 0.036 n y n ruditapes_c14738 -? 0.697 0.152 0 n y n ruditapes_c18165 -? 0.697 0.152 0 n y n ruditapes_c5393 -1.057 0.698 131.488 124.416 n n n ruditapes2_c3262 -1.099 0.698 41.416 37.7 n n n ruditapes_c2594 -1.108 0.698 34.723 31.345 n n n ruditapes_c16375 -1.221 0.698 hydroxysteroid dehydrogenase like 2 8.947 7.329 n n n ruditapes_c35278 -1.222 0.698 8.877 7.266 n n n ruditapes_c31034 -1.282 0.698 5.83 4.547 n n n ruditapes_lrc17440 -1.31 0.698 4.963 3.787 n n n ruditapes_c11027 1.589 0.698 1.094 1.738 n y n ruditapes2_c2856 -1.483 0.698 2.461 1.66 n n n ruditapes_c9769 -1.526 0.698 2.168 1.421 n y n ruditapes_c1928 -1.534 0.698 2.119 1.382 n y n ruditapes2_c3097 -1.542 0.698 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 2.074 1.345 n y n ruditapes_c21169 -1.544 0.698 2.057 1.332 n y n ruditapes_c2553 -1.623 0.698 lipase esterase 1.697 1.046 n y n ruditapes_c11536 -1.711 0.698 1.418 0.829 n y n ruditapes_c21208 -1.807 0.698 gtp-binding protein /// 0000166 // nucleotide binding 1.198 0.663 n y n ruditapes_c11807 -1.876 0.698 1.081 0.576 n y n ruditapes_lrc38181 -1.906 0.698 nadh dehydrogenase iron-sulfur protein mitochondrial precursor /// 0022900 // electron transport chain /// 0005743 // mitochondrial inner membrane 1.039 0.545 n y n ruditapes_c30163 -2.001 0.698 0.92 0.46 n y n ruditapes_s36883 3.597 0.698 0.101 0.365 n y n ruditapes_c26983 -2.224 0.698 0.734 0.33 n y n ruditapes_c14212 -2.224 0.698 0.73 0.328 n y n ruditapes_c20830 -2.224 0.698 fc fragment of low affinity receptor for 0.73 0.328 n y n ruditapes2_c476 4.497 0.698 0.067 0.303 n y n ruditapes_c3581 -2.426 0.698 0.622 0.256 n y n ruditapes_c19825 ? 0.698 novel protein vertebrate interferon-induced protein 44 0 0.151 n y n ruditapes_c25432 ? 0.698 0 0.151 n y n ruditapes_c25806 ? 0.698 0 0.151 n y n ruditapes_c26031 ? 0.698 0 0.151 n y n ruditapes_c27982 ? 0.698 predicted protein [Nematostella vectensis] 0 0.151 n y n ruditapes_lrc39890 ? 0.698 glutathione s-transferase 0 0.151 n y n ruditapes2_lrc5287 -4.448 0.698 0.309 0.07 n y n ruditapes_c18395 -4.448 0.698 0.308 0.069 n y n ruditapes_lrc20503 -4.448 0.698 0.308 0.069 n y n ruditapes_c9604 -5.559 0.698 si:ch211- protein 0.266 0.048 n y n ruditapes_lrc16569 -6.671 0.698 tubulin beta chain /// 0005200 // structural constituent of cytoskeleton /// 0032501 // multicellular organismal process /// 0007163 // establishment or maintenance of cell polarity /// 0005525 // GTP binding /// 0005829 // cytosol /// 0005874 // microtubule /// 0000226 // microtubule cytoskeleton organization 0.241 0.036 n y n ruditapes_c14084 -6.671 0.698 0.24 0.036 n y n ruditapes_c13699 -? 0.698 0.151 0 n y n ruditapes_c16985 -? 0.698 0.151 0 n y n ruditapes_c23047 -? 0.698 0.151 0 n y n ruditapes_c6989 -? 0.698 c-type mbl-2 protein 0.151 0 n y n ruditapes_c11805 -? 0.698 0.15 0 n y n ruditapes_c12022 -? 0.698 0.15 0 n y n ruditapes_c21181 -? 0.698 0.15 0 n y n ruditapes_lrc39185 -1.116 0.699 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding 29.882 26.782 n n n ruditapes_c19997 1.16 0.699 11.585 13.437 n n n ruditapes_c10180 1.165 0.699 10.951 12.754 n n n ruditapes2_lrc4730 -1.174 0.699 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 13.748 11.714 n n n ruditapes_lrc10428 1.214 0.699 6.776 8.225 n n n ruditapes_c7166 1.213 0.699 lethal k08015 cg10228-pa 6.775 8.22 n n n ruditapes_c28866 -1.213 0.699 9.489 7.823 n n n ruditapes_c8315 1.295 0.699 3.738 4.84 n n n ruditapes_c22060 -1.287 0.699 5.635 4.377 n n n ruditapes_c22568 -1.306 0.699 5.063 3.875 n n n ruditapes_c13246 -1.329 0.699 4.481 3.372 n n n ruditapes_c16488 1.396 0.699 2.193 3.062 n n n ruditapes2_lrc4875 -1.378 0.699 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 3.564 2.586 n n n ruditapes_c23879 -1.386 0.699 3.454 2.491 n n n ruditapes_c24280 -1.39 0.699 3.404 2.449 n n n ruditapes_c9439 -1.483 0.699 c-type lectin 2.442 1.647 n n n ruditapes_c27357 -1.483 0.699 2.438 1.645 n n n ruditapes_c30550 -1.606 0.699 1.755 1.093 n y n ruditapes_c8307 -1.65 0.699 1.589 0.963 n y n ruditapes_c22095 -1.756 0.699 baculoviral iap repeat-containing 3 /// 0014070 // response to organic cyclic substance /// 0007166 // cell surface receptor linked signal transduction /// 0001890 // placenta development /// 0001741 // XY body /// 0045471 // response to ethanol /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity /// 0051591 // response to cAMP /// 0010243 // response to organic nitrogen 1.299 0.74 n y n ruditapes_c22435 2.248 0.699 0.308 0.693 n y n ruditapes_c5580 -1.853 0.699 1.112 0.6 n y n ruditapes_c11591 -1.906 0.699 1.027 0.539 n y n ruditapes_lrc6855 -1.906 0.699 1.027 0.539 n y n ruditapes_lrc35509 2.923 0.699 activating transcription factor 5 0.157 0.46 n y n ruditapes_s39626 2.923 0.699 0.157 0.458 n y n ruditapes2_lrc4838 -2.224 0.699 mitochondrial atp synthase f chain /// 0005811 // lipid particle 0.727 0.327 n y n ruditapes_c22369 -2.594 0.699 0.556 0.214 n y n ruditapes_c21301 -2.78 0.699 0.503 0.181 n y n ruditapes_c15378 -2.78 0.699 0.502 0.181 n y n ruditapes_c9460 -2.859 0.699 0.483 0.169 n y n ruditapes_c10497 ? 0.699 0 0.15 n y n ruditapes_c12240 ? 0.699 0 0.15 n y n ruditapes_c16096 ? 0.699 g patch domain containing 2 0 0.15 n y n ruditapes_c20673 ? 0.699 udp-gal:beta c beta - polypeptide 3 /// 0016740 // transferase activity /// 0044464 // cell part 0 0.15 n y n ruditapes_c22345 ? 0.699 0 0.15 n y n ruditapes_c30051 ? 0.699 0 0.15 n y n ruditapes_c8160 ? 0.699 CNP1 [Rana catesbeiana] 0 0.15 n y n ruditapes2_lrc3880 ? 0.699 0 0.149 n y n ruditapes_c28428 ? 0.699 0 0.149 n y n ruditapes_c28768 ? 0.699 0 0.149 n y n ruditapes_c8459 ? 0.699 0 0.149 n y n ruditapes_lrc32824 ? 0.699 selenium binding protein 1 /// 0015031 // protein transport /// 0005634 // nucleus /// 0016020 // membrane /// 0008430 // selenium binding /// 0005737 // cytoplasm 0 0.149 n y n ruditapes_c30349 -4.448 0.699 0.306 0.069 n y n ruditapes_lrc36216 -6.671 0.699 mitochondrial ubiquinol cytochrome c reductase complex 0.24 0.036 n y n ruditapes_lrc39078 -6.671 0.699 0.24 0.036 n y n ruditapes_c24099 -? 0.699 0.15 0 n y n ruditapes_c26636 -? 0.699 0.15 0 n y n ruditapes_c8144 -? 0.699 0.15 0 n y n ruditapes_c7553 1.188 0.7 serine threonine-protein 8.471 10.067 n n n ruditapes_c1692 1.213 0.7 6.806 8.253 n n n ruditapes2_c2729 -1.268 0.7 mgc83126 protein /// 0016020 // membrane 6.285 4.957 n n n ruditapes_c22589 1.338 0.7 2.912 3.896 n n n ruditapes2_c1140 -1.334 0.7 4.348 3.259 n n n ruditapes_c17391 -1.386 0.7 3.434 2.477 n n n ruditapes_c21860 -1.413 0.7 3.094 2.19 n n n ruditapes_c16664 -1.494 0.7 2.339 1.566 n n n ruditapes_c17695 -1.519 0.7 2.174 1.431 n y n ruditapes_lrc38429 -1.61 0.7 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.728 1.073 n y n ruditapes_c18364 -1.61 0.7 1.717 1.066 n y n ruditapes_c30104 -1.621 0.7 1.676 1.033 n y n ruditapes_c11001 -1.668 0.7 1.522 0.912 n y n ruditapes_c20669 -1.694 0.7 1.437 0.848 n y n ruditapes_c21427 -1.906 0.7 1.023 0.537 n y n ruditapes2_c6490 -2.085 0.7 hematopoietic stem progenitor cells /// 0048471 // perinuclear region of cytoplasm /// 0046872 // metal ion binding /// 0016020 // membrane /// 0005783 // endoplasmic reticulum /// 0051536 // iron-sulfur cluster binding 0.823 0.395 n y n ruditapes_c7107 -2.118 0.7 caveolin 1 /// 0006816 // calcium ion transport /// 0019905 // syntaxin binding /// 0048471 // perinuclear region of cytoplasm /// 0010332 // response to gamma radiation /// 0031410 // cytoplasmic vesicle /// 0005811 // lipid particle /// 0045768 // positive regulation of anti-apoptosis /// 0006874 // cellular calcium ion homeostasis /// 0045019 // negative regulation of nitric oxide biosynthetic process /// 0052547 // regulation of peptidase activity /// 0007595 // lactation /// 0043409 // negative regulation of MAPKKK cascade /// 0030857 // negative regulation of epithelial cell differentiation /// 0033484 // nitric oxide homeostasis /// 0045907 // positive regulation of vasoconstriction /// 0005198 // structural molecule activity /// 0005901 // caveola /// 0019900 // kinase binding /// 0051260 // protein homooligomerization /// 0005925 // focal adhesion /// 0042632 // cholesterol homeostasis /// 0005739 // mitochondrion /// 0042493 // response to drug /// 0019915 // lipid storage /// 0042524 // negative regulation of tyrosine phosphorylation of Stat5 protein /// 0007584 // response to nutrient /// 0009967 // positive regulation of signal transduction /// 0006641 // triglyceride metabolic process /// 0060035 // notochord cell development /// 0000299 // integral to membrane of membrane fraction /// 0042802 // identical protein binding /// 0001570 // vasculogenesis /// 0051384 // response to glucocorticoid stimulus /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0001666 // response to hypoxia /// 0005625 // soluble fraction /// 0001960 // negative regulation of cytokine-mediated signaling pathway /// 0007520 // myoblast fusion /// 0045056 // transcytosis /// 0050998 // nitric-oxide synthase binding /// 0008104 // protein localization /// 0016504 // peptidase activator activity /// 0033344 // cholesterol efflux /// 0045214 // sarcomere organization /// 0005829 // cytosol /// 0042383 // sarcolemma /// 0009986 // cell surface /// 0060056 // mammary gland involution /// 0005938 // cell cortex /// 0000188 // inactivation of MAPK activity /// 0006940 // regulation of smooth muscle contraction /// 0005887 // integral to plasma membrane /// 0042693 // muscle cell fate commitment /// 0019217 // regulation of fatty acid metabolic process /// 0001937 // negative regulation of endothelial cell proliferation /// 0009612 // response to mechanical stimulus /// 0043627 // response to estrogen stimulus /// 0009925 // basal plasma membrane /// 0051899 // membrane depolarization /// 0048554 // positive regulation of metalloenzyme activity /// 0045807 // positive regulation of endocytosis 0.8 0.378 n y n ruditapes_lrc35921 -2.224 0.7 0.722 0.325 n y n ruditapes_c20256 -2.669 0.7 0.527 0.197 n y n ruditapes_lrc24655 -2.965 0.7 0.458 0.154 n y n ruditapes_c21968 ? 0.7 0 0.149 n y n ruditapes_c23092 ? 0.7 0 0.149 n y n ruditapes_c23478 ? 0.7 0 0.149 n y n ruditapes_c28446 ? 0.7 0 0.149 n y n ruditapes_c8843 ? 0.7 0 0.149 n y n ruditapes_s37241 ? 0.7 kazal-like serine protease inhibitor epi10 0 0.149 n y n ruditapes_c12323 ? 0.7 0 0.148 n y n ruditapes_s36065 ? 0.7 tandem repeat galectin 0 0.148 n y n ruditapes_s37856 ? 0.7 0 0.148 n y n ruditapes2_c1322 -5.559 0.7 deleted in malignant brain tumors 1 0.262 0.047 n y n ruditapes_c4927 -6.671 0.7 high mobility group 1 protein /// 0008301 // DNA bending activity /// 0005634 // nucleus /// 0045638 // negative regulation of myeloid cell differentiation /// 0045578 // negative regulation of B cell differentiation 0.238 0.036 n y n ruditapes_c21536 -6.671 0.7 0.237 0.036 n y n ruditapes2_c2776 -? 0.7 sarcoplasmic calcium-binding protein 0.149 0 n y n ruditapes_c11023 -? 0.7 0.149 0 n y n ruditapes_c7707 -? 0.7 0.149 0 n y n ruditapes2_c4291 1.127 0.701 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 17.542 19.761 n n n ruditapes_c15430 -1.152 0.701 17.353 15.061 n n n ruditapes2_lrc4700 -1.163 0.701 iq motif containing with aaa domain /// 0005524 // ATP binding /// 0017111 // nucleoside-triphosphatase activity 15.312 13.165 n n n ruditapes_c13959 1.218 0.701 6.432 7.836 n n n ruditapes_c9613 1.264 0.701 4.53 5.726 n n n ruditapes_c12533 -1.299 0.701 fanconi complementation group l /// 0019941 // modification-dependent protein catabolic process /// 0005634 // nucleus /// 0005515 // protein binding /// 0006281 // DNA repair /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0016874 // ligase activity 5.197 4.002 n n n ruditapes_lrc12769 1.439 0.701 1.805 2.597 n n n ruditapes2_c1986 -1.412 0.701 para-nitrobenzyl esterase 3.068 2.173 n n n ruditapes_c16849 1.606 0.701 1.016 1.631 n y n ruditapes_c24228 -1.483 0.701 2.416 1.63 n n n ruditapes_c21071 1.664 0.701 0.872 1.45 n y n ruditapes_c14400 -1.557 0.701 1.956 1.257 n y n ruditapes_c15822 -1.612 0.701 1.706 1.058 n y n ruditapes_c4136 -1.69 0.701 1.446 0.855 n y n ruditapes_lrc37729 2.069 0.701 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.391 0.808 n y n ruditapes_c7850 -1.756 0.701 1.278 0.728 n y n ruditapes_s39873 -1.946 0.701 ribosomal protein l38-like protein 0.962 0.495 n y n ruditapes_c19605 2.923 0.701 0.155 0.453 n y n ruditapes_c21746 3.373 0.701 0.113 0.382 n y n ruditapes_c22960 -2.224 0.701 carboxypeptidase a6 /// 0008233 // peptidase activity 0.719 0.323 n y n ruditapes2_lrc5006 -2.224 0.701 0.717 0.322 n y n ruditapes2_c1013 ? 0.701 dynein light chain roadblock-type 2 /// 0005868 // cytoplasmic dynein complex /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 0 0.148 n y n ruditapes_c13219 ? 0.701 0 0.148 n y n ruditapes_c24290 ? 0.701 0 0.148 n y n ruditapes_c29902 ? 0.701 apolipoprotein a-i binding protein 0 0.148 n y n ruditapes_c5881 ? 0.701 0 0.148 n y n ruditapes_s38949 ? 0.701 isoform g /// 0000318 // protein-methionine-R-oxide reductase activity /// 0008270 // zinc ion binding 0 0.148 n y n ruditapes_s39955 ? 0.701 0 0.148 n y n ruditapes2_lrc4882 ? 0.701 atp binding 0 0.147 n y n ruditapes_c13625 ? 0.701 0 0.147 n y n ruditapes_c19766 ? 0.701 fc low affinity alpha polypeptide /// 0044425 // membrane part /// 0048518 // positive regulation of biological process 0 0.147 n y n ruditapes_c30225 ? 0.701 0 0.147 n y n ruditapes_lrc15846 -3.058 0.701 0.437 0.143 n y n ruditapes_c21660 -6.671 0.701 0.236 0.035 n y n ruditapes_c9552 -6.671 0.701 high-affinity dopamine transporter protein /// 0006836 // neurotransmitter transport /// 0005328 // neurotransmitter:sodium symporter activity /// 0005887 // integral to plasma membrane 0.236 0.035 n y n ruditapes_c18064 -6.671 0.701 guanylate cyclase 2e 0.235 0.035 n y n ruditapes_c5421 -6.671 0.701 0.235 0.035 n y n ruditapes2_lrc6607 -8.895 0.701 0.209 0.023 n y n ruditapes2_lrc4001 -? 0.701 0.148 0 n y n ruditapes_c22086 -? 0.701 0.148 0 n y n ruditapes_c25408 -? 0.701 0.148 0 n y n ruditapes2_c1133 1.24 0.702 5.355 6.638 n n n ruditapes2_c3699 -1.26 0.702 6.52 5.174 n n n ruditapes_c26877 1.281 0.702 4.017 5.146 n n n ruditapes_c16536 -1.376 0.702 flj27505 protein 3.529 2.566 n n n ruditapes_c3605 -1.422 0.702 2.938 2.067 n n n ruditapes_c18611 -1.468 0.702 2.501 1.704 n n n ruditapes_c17236 -1.516 0.702 2.163 1.426 n y n ruditapes_c18007 -1.537 0.702 2.048 1.333 n y n ruditapes_c31505 1.799 0.702 0.629 1.131 n y n ruditapes_lrc9732 -1.597 0.702 1.752 1.097 n y n ruditapes_c28563 -1.652 0.702 1.551 0.939 n y n ruditapes_lrc36348 2.158 0.702 0.34 0.734 n y n ruditapes_c28679 2.586 0.702 0.206 0.534 n y n ruditapes_c7687 3.597 0.702 giardia variant-specific surface protein 0.099 0.356 n y n ruditapes_c13550 -2.224 0.702 0.713 0.321 n y n ruditapes_c14525 -2.224 0.702 0.712 0.32 n y n ruditapes_c29229 -2.224 0.702 0.71 0.319 n y n ruditapes_c23637 -2.669 0.702 0.521 0.195 n y n ruditapes2_c3230 ? 0.702 0 0.147 n y n ruditapes_c15076 ? 0.702 0 0.147 n y n ruditapes_c19692 ? 0.702 0 0.147 n y n ruditapes2_c2317 ? 0.702 0 0.146 n y n ruditapes_c14734 ? 0.702 0 0.146 n y n ruditapes_c26527 ? 0.702 0 0.146 n y n ruditapes_c27231 ? 0.702 0 0.146 n y n ruditapes_c29009 ? 0.702 0 0.146 n y n ruditapes_c32097 ? 0.702 0 0.146 n y n ruditapes_c8399 ? 0.702 0 0.146 n y n ruditapes_lrc33451 ? 0.702 isoform cra_a 0 0.146 n y n ruditapes_c26846 -4.448 0.702 0.3 0.067 n y n ruditapes_c17545 -6.671 0.702 0.234 0.035 n y n ruditapes_c20706 -6.671 0.702 0.234 0.035 n y n ruditapes_c8000 -? 0.702 0.147 0 n y n ruditapes_c23320 -1.154 0.703 16.745 14.504 n n n ruditapes2_lrc4478 1.313 0.703 3.278 4.304 n n n ruditapes_c25745 1.327 0.703 3.032 4.022 n n n ruditapes_c27563 -1.322 0.703 4.517 3.418 n n n ruditapes_c10677 -1.34 0.703 4.147 3.095 n n n ruditapes_lrc18438 -1.349 0.703 3.952 2.929 n n n ruditapes_c4545 1.412 0.703 1.987 2.805 n n n ruditapes_c5195 -1.368 0.703 3.624 2.648 n n n ruditapes_c10682 -1.39 0.703 3.314 2.385 n n n ruditapes_c17814 1.461 0.703 1.618 2.365 n n n ruditapes_c17325 -1.415 0.703 3.002 2.121 n n n ruditapes2_c2592 1.555 0.703 1.17 1.819 n y n ruditapes2_lrc3302 -1.483 0.703 2.375 1.602 n n n ruditapes2_c2594 -1.483 0.703 toll-like receptor 2.374 1.601 n n n ruditapes_c4946 -1.588 0.703 1.775 1.118 n y n ruditapes_c8018 1.899 0.703 complement c1q-like protein 4 precursor 0.51 0.968 n y n ruditapes_c7988 1.949 0.703 0.467 0.91 n y n ruditapes_c11611 1.991 0.703 0.434 0.865 n y n ruditapes_c28741 -1.705 0.703 1.383 0.811 n y n ruditapes2_c6246 -1.715 0.703 1.352 0.788 n y n ruditapes_lrc33505 2.099 0.703 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 0.368 0.771 n y n ruditapes_c30278 -1.779 0.703 1.208 0.679 n y n ruditapes2_lrc3355 -1.84 0.703 1.1 0.598 n y n ruditapes_c30062 -1.853 0.703 1.077 0.581 n y n ruditapes2_c3222 -1.853 0.703 peripheral-type benzodiazepine receptor /// 0005739 // mitochondrion 1.075 0.58 n y n ruditapes_c11030 -2.107 0.703 eukaryotic translation initiation factor 4 isoform cra_c 0.793 0.376 n y n ruditapes_c1722 -2.426 0.703 heat shock protein 22 isoform 2 0.604 0.249 n y n ruditapes_c14609 ? 0.703 0 0.146 n y n ruditapes_c17573 ? 0.703 0 0.146 n y n ruditapes_c24473 ? 0.703 ankyrin repeat protein 0 0.146 n y n ruditapes_c28308 ? 0.703 betaine-homocysteine methyltransferase /// 0044238 // primary metabolic process /// 0008172 // S-methyltransferase activity /// 0044249 // cellular biosynthetic process /// 0005737 // cytoplasm 0 0.146 n y n ruditapes_c9205 ? 0.703 protein 0 0.146 n y n ruditapes_c9821 ? 0.703 0 0.146 n y n ruditapes_lrc31351 ? 0.703 0 0.146 n y n ruditapes_c13626 ? 0.703 0 0.145 n y n ruditapes_c22197 ? 0.703 0 0.145 n y n ruditapes_c22872 ? 0.703 0 0.145 n y n ruditapes_c31494 ? 0.703 0 0.145 n y n ruditapes_c498 ? 0.703 0 0.145 n y n ruditapes_lrc12899 ? 0.703 methyltransferase type 11 0 0.145 n y n ruditapes_s38959 ? 0.703 0 0.145 n y n ruditapes2_c5967 -3.336 0.703 0.389 0.117 n y n ruditapes_c15594 -4.448 0.703 0.299 0.067 n y n ruditapes_c20222 -4.448 0.703 0.298 0.067 n y n ruditapes_c24114 -6.671 0.703 0.232 0.035 n y n ruditapes_c8986 -6.671 0.703 0.232 0.035 n y n ruditapes_c17886 -6.671 0.703 0.231 0.035 n y n ruditapes_c22611 -? 0.703 0.146 0 n y n ruditapes_c13257 -? 0.703 predicted protein [Nematostella vectensis] 0.145 0 n y n ruditapes_c16653 -? 0.703 0.145 0 n y n ruditapes_c28939 -? 0.703 0.145 0 n y n ruditapes_s37941 -? 0.703 0.145 0 n y n ruditapes_c7097 1.129 0.704 proliferating cell nuclear antigen "/// 0005652 // nuclear lamina /// 0009617 // response to bacterium /// 0006297 // nucleotide-excision repair, DNA gap filling /// 0030337 // DNA polymerase processivity factor activity /// 0008283 // cell proliferation /// 0006287 // base-excision repair, gap-filling /// 0006886 // intracellular protein transport /// 0005663 // DNA replication factor C complex /// 0005654 // nucleoplasm /// 0003677 // DNA binding /// 0006275 // regulation of DNA replication /// 0000307 // cyclin-dependent protein kinase holoenzyme complex /// 0048015 // phosphoinositide-mediated signaling /// 0032405 // MutLalpha complex binding /// 0043626 // PCNA complex" 16.561 18.696 n n n ruditapes2_c2139 -1.136 0.704 gamma- - 21.1 18.575 n n n ruditapes_c9558 -1.212 0.704 9.265 7.645 n n n ruditapes_c12515 -1.264 0.704 6.286 4.973 n n n ruditapes2_c501 1.312 0.704 3.264 4.281 n n n ruditapes_c19662 1.394 0.704 2.137 2.978 n n n ruditapes_c11945 1.451 0.704 1.677 2.434 n n n ruditapes_c13031 -1.474 0.704 2.427 1.647 n n n ruditapes_c23252 -1.498 0.704 2.248 1.501 n n n ruditapes_c29016 -1.516 0.704 2.139 1.41 n y n ruditapes_c15563 -1.578 0.704 mitochondrial ribosomal protein s24 /// 0005840 // ribosome 1.807 1.145 n y n ruditapes_c29602 -1.819 0.704 1.128 0.62 n y n ruditapes_lrc32809 -1.837 0.704 ribosomal protein l6 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.097 0.597 n y n ruditapes2_c3421 -2.224 0.704 0.703 0.316 n y n ruditapes_c21321 4.047 0.704 0.078 0.314 n y n ruditapes2_lrc4019 -2.446 0.704 0.588 0.241 n y n ruditapes_c17392 ? 0.704 0 0.145 n y n ruditapes_c19064 ? 0.704 fibrillin 1 /// 0005488 // binding /// 0044421 // extracellular region part 0 0.145 n y n ruditapes_c18375 ? 0.704 0 0.144 n y n ruditapes_c21754 ? 0.704 thrombospondin 2 /// 0010926 // anatomical structure formation /// 0005488 // binding /// 0050789 // regulation of biological process /// 0009987 // cellular process 0 0.144 n y n ruditapes_c9815 ? 0.704 0 0.144 n y n ruditapes_lrc39025 ? 0.704 0 0.144 n y n ruditapes_c2354 -4.448 0.704 0.296 0.066 n y n ruditapes_lrc35713 -5.559 0.704 0.254 0.046 n y n ruditapes_c11297 -6.671 0.704 0.23 0.034 n y n ruditapes_c3836 -6.671 0.704 0.23 0.034 n y n ruditapes_c7193 -6.671 0.704 0.23 0.034 n y n ruditapes_c12609 -? 0.704 0.145 0 n y n ruditapes_c12606 1.121 0.705 18.418 20.652 n n n ruditapes_c21319 -1.138 0.705 20.37 17.9 n n n ruditapes_c2030 -1.212 0.705 citrate synthase /// 0005759 // mitochondrial matrix /// 0044262 // cellular carbohydrate metabolic process /// 0004108 // citrate (Si)-synthase activity /// 0005634 // nucleus /// 0006099 // tricarboxylic acid cycle /// 0008415 // acyltransferase activity 9.218 7.609 n n n ruditapes_c24169 -1.268 0.705 6.086 4.799 n n n ruditapes_lrc23059 1.349 0.705 2.651 3.576 n n n ruditapes_c15020 -1.32 0.705 4.498 3.407 n n n ruditapes_c16359 -1.334 0.705 4.188 3.139 n n n ruditapes_c2530 1.388 0.705 2.186 3.035 n n n ruditapes_c8499 -1.411 0.705 3.006 2.13 n n n ruditapes_c21390 1.529 0.705 1.256 1.92 n y n ruditapes_c21340 1.735 0.705 26s protease regulatory subunit 7 /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0008233 // peptidase activity /// 0044419 // interspecies interaction between organisms 0.71 1.232 n y n ruditapes_c18859 1.743 0.705 0.697 1.215 n y n ruditapes_c12903 -1.647 0.705 1.534 0.931 n y n ruditapes_c7608 -1.668 0.705 loc495955 protein 1.47 0.881 n y n ruditapes_c27320 -1.668 0.705 1.467 0.88 n y n ruditapes_c20896 -1.743 0.705 1.271 0.729 n y n ruditapes_c14458 -1.779 0.705 1.194 0.671 n y n ruditapes_c20924 -1.906 0.705 0.985 0.517 n y n ruditapes_s39010 -1.906 0.705 fatty acid binding protein 4 /// 0005737 // cytoplasm 0.983 0.516 n y n ruditapes_c14177 -2.224 0.705 0.696 0.313 n y n ruditapes_c18506 -2.594 0.705 0.534 0.206 n y n ruditapes_c28147 -2.669 0.705 b chain miniprotein mp-2 complex with streptavidin 0.51 0.191 n y n ruditapes_c24208 -2.965 0.705 0.441 0.149 n y n ruditapes_c13015 ? 0.705 0 0.143 n y n ruditapes_c16523 ? 0.705 zymogen granule membrane glycoprotein 2 0 0.143 n y n ruditapes_c18195 ? 0.705 0 0.143 n y n ruditapes_c18850 ? 0.705 0 0.143 n y n ruditapes_c19852 ? 0.705 0 0.143 n y n ruditapes_c20540 ? 0.705 0 0.143 n y n ruditapes_c5119 ? 0.705 0 0.143 n y n ruditapes_c8293 ? 0.705 patched family domain containing protein /// 0016020 // membrane /// 0016829 // lyase activity 0 0.143 n y n ruditapes_s34849 ? 0.705 0 0.143 n y n ruditapes2_c2375 -4.003 0.705 lectin precursor 0.321 0.08 n y n ruditapes_lrc39273 -6.671 0.705 0.229 0.034 n y n ruditapes_c8308 -? 0.705 isoform c 0.144 0 n y n ruditapes_lrc33777 -1.074 0.706 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 71.512 66.613 n n n ruditapes2_c277 -1.183 0.706 11.955 10.11 n n n ruditapes_lrc9294 -1.259 0.706 6.44 5.117 n n n ruditapes_c19361 1.297 0.706 3.516 4.56 n n n ruditapes_c23730 -1.278 0.706 5.656 4.425 n n n ruditapes_c18522 1.327 0.706 2.961 3.929 n n n ruditapes_c1358 1.338 0.706 peptidylprolyl isomerase -like 1 /// 0008380 // RNA splicing /// 0005681 // spliceosomal complex /// 0048042 // regulation of post-mating oviposition /// 0006397 // mRNA processing /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 2.772 3.71 n n n ruditapes_c21614 -1.385 0.706 3.297 2.38 n n n ruditapes_c17466 1.456 0.706 1.624 2.364 n n n ruditapes_c25901 -1.504 0.706 2.183 1.451 n y n ruditapes_c24928 -1.575 0.706 1.791 1.137 n y n ruditapes_lrc38793 -1.578 0.706 ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 1.78 1.128 n y n ruditapes2_lrc5666 1.799 0.706 0.611 1.099 n y n ruditapes_c19510 -1.644 0.706 1.534 0.933 n y n ruditapes_lrc36444 -1.697 0.706 1.373 0.809 n y n ruditapes_c15302 2.099 0.706 0.358 0.752 n y n ruditapes_c23811 -1.807 0.706 acyl- dehydrogenase /// 0003995 // acyl-CoA dehydrogenase activity /// 0006629 // lipid metabolic process 1.131 0.626 n y n ruditapes_c21983 -1.946 0.706 0.927 0.477 n y n ruditapes_c7355 2.923 0.706 0.15 0.438 n y n ruditapes2_c6422 2.998 0.706 ribosomal protein l13 /// 0005488 // binding /// 0005840 // ribosome /// 0006412 // translation /// 0005829 // cytosol 0.141 0.423 n y n ruditapes_c16208 3.148 0.706 0.127 0.398 n y n ruditapes_c29678 -2.224 0.706 0.694 0.312 n y n ruditapes_c11118 ? 0.706 negative elongation factor e 0 0.143 n y n ruditapes_c21030 ? 0.706 0 0.143 n y n ruditapes_c21960 ? 0.706 0 0.143 n y n ruditapes_c22062 ? 0.706 0 0.143 n y n ruditapes_lrc38499 ? 0.706 0 0.143 n y n ruditapes2_lrc4799 ? 0.706 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0 0.142 n y n ruditapes_c20940 ? 0.706 0 0.142 n y n ruditapes_c30352 ? 0.706 0 0.142 n y n ruditapes_c31021 ? 0.706 0 0.142 n y n ruditapes_c3213 ? 0.706 0 0.142 n y n ruditapes_lrc35574 -3.336 0.706 0.38 0.114 n y n ruditapes_lrc32659 -3.706 0.706 lethal neo18 0.342 0.092 n y n ruditapes_c8918 -4.448 0.706 bumetanide-sensitive na-k-cl cotransport /// 0006821 // chloride transport /// 0006814 // sodium ion transport /// 0016021 // integral to membrane /// 0015377 // cation:chloride symporter activity 0.292 0.066 n y n ruditapes_lrc29317 -4.448 0.706 0.292 0.066 n y n ruditapes_s39976 -6.671 0.706 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.228 0.034 n y n ruditapes_c25357 -? 0.706 0.143 0 n y n ruditapes_c3496 -1.091 0.707 46.255 42.41 n n n ruditapes_c12057 1.103 0.707 voltage-dependent anion channel 2 /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0006820 // anion transport /// 0005741 // mitochondrial outer membrane /// 0008308 // voltage-gated anion channel activity 24.635 27.163 n n n ruditapes_c27524 1.314 0.707 3.155 4.148 n n n ruditapes_c12474 -1.292 0.707 5.174 4.003 n n n ruditapes_c30611 -1.317 0.707 4.53 3.44 n n n ruditapes_c13753 -1.324 0.707 cg34127 cg34127-pa /// 0004091 // carboxylesterase activity /// 0005623 // cell /// 0005515 // protein binding /// 0006581 // acetylcholine catabolic process 4.343 3.28 n n n ruditapes_c8970 1.381 0.707 2.219 3.064 n n n ruditapes2_c1352 -1.352 0.707 3.81 2.819 n n n ruditapes_c22170 -1.375 0.707 3.42 2.487 n n n ruditapes_c14857 1.525 0.707 1.251 1.908 n y n ruditapes2_c1586 1.586 0.707 1.032 1.637 n y n ruditapes_lrc32855 1.591 0.707 histone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0001740 // Barr body /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0010171 // body morphogenesis /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape /// 0009792 // embryonic development ending in birth or egg hatching /// 0000786 // nucleosome 1.019 1.621 n y n ruditapes2_c3427 1.596 0.707 protein isoform 1 1.007 1.607 n y n ruditapes_c9341 -1.617 0.707 c-type lectin /// 0005488 // binding /// 0016020 // membrane /// 0050896 // response to stimulus /// 0006897 // endocytosis /// 0004872 // receptor activity 1.615 0.998 n y n ruditapes_c20147 -1.718 0.707 1.314 0.765 n y n ruditapes_s36089 2.099 0.707 ribosomal protein l11 /// 0030529 // ribonucleoprotein complex /// 0044446 // intracellular organelle part /// 0042254 // ribosome biogenesis /// 0043232 // intracellular non-membrane-bounded organelle /// 0005488 // binding /// 0006412 // translation /// 0005829 // cytosol 0.357 0.75 n y n ruditapes_c27147 -2.224 0.707 0.687 0.309 n y n ruditapes_c25572 -2.224 0.707 cysteine dioxygenase /// 0046439 // L-cysteine metabolic process /// 0017172 // cysteine dioxygenase activity /// 0005506 // iron ion binding 0.685 0.308 n y n ruditapes2_lrc5768 4.497 0.707 protein 0.063 0.284 n y n ruditapes_c17247 -2.594 0.707 0.523 0.202 n y n ruditapes2_c1975 -2.78 0.707 novel protein vertebrate gliacolin 0.473 0.17 n y n ruditapes_lrc25257 -2.965 0.707 0.433 0.146 n y n ruditapes_c18726 ? 0.707 0 0.142 n y n ruditapes_c12595 ? 0.707 0 0.141 n y n ruditapes_c13183 ? 0.707 0 0.141 n y n ruditapes_c24656 ? 0.707 0 0.141 n y n ruditapes_c26975 ? 0.707 0 0.141 n y n ruditapes_c30760 ? 0.707 0 0.141 n y n ruditapes_c3115 ? 0.707 0 0.141 n y n ruditapes_c22676 -4.448 0.707 0.291 0.065 n y n ruditapes_s38436 -4.448 0.707 0.291 0.065 n y n ruditapes_lrc32886 -6.671 0.707 0.226 0.034 n y n ruditapes2_c2933 -? 0.707 0.142 0 n y n ruditapes_c24705 -? 0.707 0.142 0 n y n ruditapes_c11858 -? 0.707 0.141 0 n y n ruditapes_c13559 -1.141 0.708 19.216 16.845 n n n ruditapes_c22116 -1.219 0.708 8.501 6.974 n n n ruditapes_c9458 -1.235 0.708 vacuolar protein sorting 41 isoform cra_b 7.432 6.016 n n n ruditapes_c24216 1.296 0.708 3.486 4.519 n n n ruditapes_c9446 -1.307 0.708 prohibitin 2 "/// 0006355 // regulation of transcription, DNA-dependent /// 0016481 // negative regulation of transcription /// 0005634 // nucleus /// 0005743 // mitochondrial inner membrane /// 0030331 // estrogen receptor binding /// 0007165 // signal transduction /// 0004872 // receptor activity /// 0016566 // specific transcriptional repressor activity" 4.742 3.629 n n n ruditapes2_c4537 -1.307 0.708 iron storage protein h-ferritin /// 0046872 // metal ion binding /// 0065007 // biological regulation /// 0005515 // protein binding 4.737 3.625 n n n ruditapes_c14153 1.349 0.708 2.584 3.486 n n n ruditapes_c17581 -1.439 0.708 2.653 1.844 n n n ruditapes2_c998 -1.441 0.708 2.633 1.828 n n n ruditapes_c12647 -1.578 0.708 1.761 1.116 n y n ruditapes_c25171 2.248 0.708 0.288 0.648 n y n ruditapes_c20958 -1.882 0.708 beta lysosomal /// 0044238 // primary metabolic process /// 0005488 // binding /// 0044260 // cellular macromolecule metabolic process /// 0004567 // beta-mannosidase activity /// 0044464 // cell part 1 0.531 n y n ruditapes_lrc21394 2.698 0.708 gastric intrinsic factor 0.178 0.481 n y n ruditapes_c20629 -2.022 0.708 0.837 0.414 n y n ruditapes_c19572 -2.224 0.708 0.682 0.307 n y n ruditapes_c20041 -2.224 0.708 0.682 0.307 n y n ruditapes_c16818 4.047 0.708 0.075 0.306 n y n ruditapes_c24833 4.497 0.708 0.063 0.283 n y n ruditapes_lrc34421 4.497 0.708 nadh dehydrogenase iron-sulfur protein mitochondrial precursor 0.063 0.282 n y n ruditapes_c3243 -2.471 0.708 calmodulin /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004687 // myosin light chain kinase activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0004721 // phosphoprotein phosphatase activity /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0008270 // zinc ion binding /// 0000287 // magnesium ion binding /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005506 // iron ion binding /// 0005509 // calcium ion binding /// 0018298 // protein-chromophore linkage /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 0.565 0.229 n y n ruditapes2_c1004 ? 0.708 deleted in malignant brain tumors 1 0 0.141 n y n ruditapes2_c2747 ? 0.708 0 0.141 n y n ruditapes_c14065 ? 0.708 pao retrotransposon peptidase family protein 0 0.141 n y n ruditapes_c14501 ? 0.708 0 0.141 n y n ruditapes_c16447 ? 0.708 arp2 3 complex 20 kd subunit "/// 0030674 // protein binding, bridging /// 0045010 // actin nucleation /// 0051015 // actin filament binding /// 0006911 // phagocytosis, engulfment /// 0005885 // Arp2/3 protein complex /// 0042995 // cell projection /// 0005737 // cytoplasm /// 0030041 // actin filament polymerization /// 0030866 // cortical actin cytoskeleton organization /// 0030031 // cell projection assembly /// 0008360 // regulation of cell shape" 0 0.141 n y n ruditapes_c6739 ? 0.708 tropomyosin [Venerupis philippinarum] 0 0.141 n y n ruditapes_lrc21617 ? 0.708 0 0.141 n y n ruditapes_lrc34373 ? 0.708 0 0.141 n y n ruditapes_c15695 ? 0.708 0 0.14 n y n ruditapes_c18018 ? 0.708 0 0.14 n y n ruditapes_c18567 ? 0.708 0 0.14 n y n ruditapes_c23596 ? 0.708 0 0.14 n y n ruditapes_c26911 ? 0.708 0 0.14 n y n ruditapes_c30433 ? 0.708 0 0.14 n y n ruditapes_lrc8691 ? 0.708 0 0.14 n y n ruditapes_c11015 -? 0.708 0.14 0 n y n ruditapes_c31899 -? 0.708 0.14 0 n y n ruditapes_c7160 -? 0.708 0.14 0 n y n ruditapes_c7864 -? 0.708 0.14 0 n y n ruditapes_c9500 -? 0.708 0.14 0 n y n ruditapes_c31969 1.278 0.709 3.903 4.987 n n n ruditapes2_lrc5549 1.349 0.709 kda midgut partial 2.569 3.466 n n n ruditapes_c11006 1.412 0.709 nuclear transport factor 2-like export factor 2 /// 0005622 // intracellular 1.912 2.699 n n n ruditapes_lrc24257 -1.385 0.709 3.238 2.338 n n n ruditapes_c3988 -1.404 0.709 2.984 2.124 n n n ruditapes_c9671 -1.411 0.709 hypothetical protein BRAFLDRAFT_127252 [Branchiostoma floridae] 2.923 2.071 n n n ruditapes_lrc34992 1.561 0.709 placenta-specific 8 1.103 1.722 n y n ruditapes_c11943 -1.512 0.709 2.09 1.382 n y n ruditapes_c903 -1.524 0.709 romo1_xentr ame: full=reactive oxygen species modulator 1 short=ros modulator 1 ame: full=protein mgr2 homolog /// 0034614 // cellular response to reactive oxygen species /// 0005739 // mitochondrion /// 0008284 // positive regulation of cell proliferation /// 0016020 // membrane /// 0001302 // replicative cell aging /// 0010670 // positive regulation of oxygen and reactive oxygen species metabolic process 2.021 1.327 n y n ruditapes_c7171 1.724 0.709 0.706 1.217 n y n ruditapes_c4290 -1.588 0.709 complement component c3 1.702 1.071 n y n ruditapes_lrc35435 -1.654 0.709 hypothetical protein [Schistosoma mansoni] 1.467 0.887 n y n ruditapes_c29170 -1.668 0.709 1.426 0.855 n y n ruditapes_c15779 -1.668 0.709 1.425 0.854 n y n ruditapes2_lrc4927 2.473 0.709 protein 0.219 0.543 n y n ruditapes_c14064 -1.906 0.709 0.957 0.502 n y n ruditapes_c24870 2.923 0.709 0.147 0.429 n y n ruditapes_c19520 2.923 0.709 0.146 0.428 n y n ruditapes_lrc33652 2.998 0.709 0.138 0.413 n y n ruditapes2_c1138 -2.085 0.709 v-crk sarcoma virus ct10 oncogene homolog "/// 0046330 // positive regulation of JNK cascade /// 0007520 // myoblast fusion /// 0046529 // imaginal disc fusion, thorax closure /// 0005070 // SH3/SH2 adaptor activity" 0.773 0.371 n y n ruditapes_c16180 3.597 0.709 protein 0.094 0.339 n y n ruditapes_c26871 3.597 0.709 0.094 0.339 n y n ruditapes_c17410 -2.594 0.709 0.516 0.199 n y n ruditapes_lrc34042 -2.859 0.709 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 0.451 0.158 n y n ruditapes_c13338 ? 0.709 aldolase /// 0003824 // catalytic activity /// 0008152 // metabolic process 0 0.139 n y n ruditapes_c21920 ? 0.709 hypothetical protein BRAFLDRAFT_67985 [Branchiostoma floridae] 0 0.139 n y n ruditapes_c27215 ? 0.709 0 0.139 n y n ruditapes_c31010 ? 0.709 0 0.139 n y n ruditapes_c7109 ? 0.709 nad(+) adp-ribosyltransferase-3-like protein 0 0.139 n y n ruditapes_c6274 -3.706 0.709 0.335 0.09 n y n ruditapes_c30200 -4.448 0.709 0.287 0.064 n y n ruditapes_c23089 -6.671 0.709 0.222 0.033 n y n ruditapes2_c178 -? 0.709 0.139 0 n y n ruditapes2_lrc7058 -? 0.709 0.139 0 n y n ruditapes_c16758 -? 0.709 0.139 0 n y n ruditapes2_c1723 1.101 0.71 25.006 27.528 n n n ruditapes_c23427 -1.136 0.71 20.099 17.685 n n n ruditapes_c13820 -1.172 0.71 sjchgc05453 protein /// 0005385 // zinc ion transmembrane transporter activity /// 0016020 // membrane /// 0006829 // zinc ion transport /// 0010043 // response to zinc ion 13.005 11.099 n n n ruditapes_c12539 1.18 0.71 8.56 10.104 n n n ruditapes_c2495 -1.192 0.71 cq098_human ame: full=uncharacterized protein c17orf98 10.611 8.901 n n n ruditapes_c7716 1.203 0.71 6.879 8.275 n n n ruditapes_lrc22140 1.209 0.71 6.504 7.863 n n n ruditapes_c7297 1.212 0.71 proteasome ( macropain) 26s atpase 2 /// 0019538 // protein metabolic process /// 0005515 // protein binding /// 0043234 // protein complex /// 0016787 // hydrolase activity /// 0009987 // cellular process /// 0044424 // intracellular part 6.345 7.693 n n n ruditapes_c11693 1.275 0.71 3.926 5.007 n n n ruditapes_c37404 -1.271 0.71 eukaryotic translation initiation factor 3 subunit 3 gamma /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0032403 // protein complex binding /// 0005829 // cytosol /// 0005792 // microsome 5.762 4.534 n n n ruditapes2_c3452 -1.275 0.71 5.619 4.407 n n n ruditapes_c13549 1.349 0.71 2.557 3.449 n n n ruditapes_c20634 -1.334 0.71 4.032 3.022 n n n ruditapes_c20209 1.382 0.71 2.157 2.982 n n n ruditapes2_lrc4117 -1.352 0.71 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.713 2.746 n n n ruditapes_c24743 1.413 0.71 1.884 2.663 n n n ruditapes_lrc33732 -1.375 0.71 ribosomal protein s18 /// 0007275 // multicellular organismal development /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006417 // regulation of translation 3.344 2.432 n n n ruditapes2_c555 1.702 0.71 glutathione transferase omega-1 "/// 0016782 // transferase activity, transferring sulfur-containing groups /// 0004364 // glutathione transferase activity /// 0045174 // glutathione dehydrogenase (ascorbate) activity /// 0004734 // pyrimidodiazepine synthase activity /// 0008152 // metabolic process /// 0005737 // cytoplasm" 0.742 1.262 n y n ruditapes_c25024 -1.598 0.71 1.652 1.033 n y n ruditapes_c27776 -1.609 0.71 1.614 1.003 n y n ruditapes_c25817 2.024 0.71 0.393 0.796 n y n ruditapes_lrc13544 2.024 0.71 0.393 0.796 n y n ruditapes2_c1583 2.024 0.71 0.391 0.791 n y n ruditapes_c11769 -1.756 0.71 1.201 0.684 n y n ruditapes_c15474 -1.831 0.71 1.061 0.579 n y n ruditapes_c22621 -2.541 0.71 0.531 0.209 n y n ruditapes_c10042 -2.594 0.71 0.512 0.197 n y n ruditapes_c21309 -2.965 0.71 0.426 0.144 n y n ruditapes_c21276 ? 0.71 0 0.139 n y n ruditapes_c23065 ? 0.71 0 0.139 n y n ruditapes_c26944 ? 0.71 0 0.139 n y n ruditapes_c30730 ? 0.71 0 0.139 n y n ruditapes_lrc36580 ? 0.71 0 0.139 n y n ruditapes_c10741 ? 0.71 0 0.138 n y n ruditapes_c2590 ? 0.71 0 0.138 n y n ruditapes_c30385 ? 0.71 0 0.138 n y n ruditapes_c17630 -? 0.71 0.139 0 n y n ruditapes_c26186 -? 0.71 0.138 0 n y n ruditapes_c28331 -? 0.71 0.138 0 n y n ruditapes_c21505 1.225 0.711 5.642 6.913 n n n ruditapes_c11750 1.279 0.711 u3 small nucleolar interacting protein 2 /// 0030532 // small nuclear ribonucleoprotein complex /// 0006364 // rRNA processing /// 0005732 // small nucleolar ribonucleoprotein complex 3.818 4.884 n n n ruditapes2_c1606 1.283 0.711 zinc finger 3.711 4.762 n n n ruditapes2_lrc2612 1.316 0.711 3.037 3.995 n n n ruditapes_c11907 -1.412 0.711 2.873 2.035 n n n ruditapes_c1969 -1.499 0.711 gm2 activator protein /// 0044238 // primary metabolic process /// 0044464 // cell part 2.137 1.425 n n n ruditapes_c3468 1.799 0.711 0.59 1.061 n y n ruditapes_c15332 -1.647 0.711 sjchgc05781 protein 1.467 0.89 n y n ruditapes_c9966 1.937 0.711 0.451 0.874 n y n ruditapes_c15920 -1.718 0.711 neuroligin 5 1.268 0.738 n y n ruditapes_c27005 -2.022 0.711 pol-like protein 0.818 0.404 n y n ruditapes2_c2802 3.148 0.711 0.123 0.386 n y n ruditapes_c5387 -2.224 0.711 0.669 0.301 n y n ruditapes_c21836 4.047 0.711 0.074 0.3 n y n ruditapes_c8159 4.047 0.711 0.074 0.3 n y n ruditapes_c7596 4.947 0.711 0.052 0.257 n y n ruditapes_c17005 -2.594 0.711 sulfotransferase member 1 /// 0008146 // sulfotransferase activity /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process 0.509 0.196 n y n ruditapes_c27386 -2.594 0.711 0.509 0.196 n y n ruditapes_c24091 -2.669 0.711 0.488 0.183 n y n ruditapes2_c1721 ? 0.711 nudix (nucleoside diphosphate linked moiety x)-type motif 2 0 0.137 n y n ruditapes2_c2700 ? 0.711 0 0.137 n y n ruditapes_c13307 ? 0.711 0 0.137 n y n ruditapes_c23813 ? 0.711 0 0.137 n y n ruditapes_c26295 ? 0.711 0 0.137 n y n ruditapes_c27280 ? 0.711 0 0.137 n y n ruditapes_c3759 ? 0.711 tandem repeat galectin /// 0005529 // sugar binding 0 0.137 n y n ruditapes2_c543 -3.177 0.711 ganglioside m2 activator-like protein 0.389 0.122 n y n ruditapes_c19645 -4.448 0.711 0.281 0.063 n y n ruditapes_c26374 -? 0.711 0.138 0 n y n ruditapes_c18223 -? 0.711 0.137 0 n y n ruditapes_c5516 -1.202 0.712 9.588 7.979 n n n ruditapes_c10829 -1.241 0.712 6.981 5.626 n n n ruditapes_c24172 1.326 0.712 2.854 3.785 n n n ruditapes_c12040 -1.314 0.712 4.402 3.35 n n n ruditapes_c13371 -1.338 0.712 3.889 2.906 n n n ruditapes_c30929 -1.402 0.712 2.94 2.097 n n n ruditapes_c23837 -1.427 0.712 2.69 1.885 n n n ruditapes_c11809 -1.547 0.712 probable l-proline 4-hydroxylase 1.854 1.198 n y n ruditapes_c28393 -1.588 0.712 1.663 1.047 n y n ruditapes_c26467 -1.623 0.712 1.534 0.945 n y n ruditapes_c27488 2.024 0.712 0.385 0.78 n y n ruditapes_s37637 -1.73 0.712 1.237 0.715 n y n ruditapes_c8264 -1.779 0.712 atp-binding sub-family g member 5 1.134 0.637 n y n ruditapes2_lrc5059 2.248 0.712 0.28 0.628 n y n ruditapes_lrc13746 2.398 0.712 0.234 0.561 n y n ruditapes_c9989 -1.906 0.712 chromosome 1 open reading frame 163 0.939 0.493 n y n ruditapes_c28262 -1.906 0.712 0.935 0.491 n y n ruditapes_c885 2.811 0.712 serine proteases and ovochymase regions /// 0003824 // catalytic activity 0.156 0.439 n y n ruditapes_lrc34341 -2.022 0.712 fau /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.811 0.401 n y n ruditapes2_lrc5588 3.148 0.712 protein /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.121 0.382 n y n ruditapes_c2279 4.047 0.712 0.073 0.297 n y n ruditapes2_c2964 -2.409 0.712 0.572 0.238 n y n ruditapes_c19548 -2.446 0.712 0.558 0.228 n y n ruditapes_c20168 -2.78 0.712 0.459 0.165 n y n ruditapes_c11905 ? 0.712 0 0.137 n y n ruditapes_c14273 ? 0.712 loc795887 protein 0 0.137 n y n ruditapes_c18185 ? 0.712 0 0.137 n y n ruditapes_lrc7561 ? 0.712 0 0.137 n y n ruditapes2_c5913 ? 0.712 0 0.136 n y n ruditapes_c12693 ? 0.712 0 0.136 n y n ruditapes_c12978 ? 0.712 0 0.136 n y n ruditapes_c15597 ? 0.712 0 0.136 n y n ruditapes_c23869 ? 0.712 0 0.136 n y n ruditapes_c31206 ? 0.712 0 0.136 n y n ruditapes_c31534 ? 0.712 0 0.136 n y n ruditapes_c5935 ? 0.712 0 0.136 n y n ruditapes_c8554 ? 0.712 0 0.136 n y n ruditapes_lrc30410 ? 0.712 0 0.136 n y n ruditapes_c15491 -3.706 0.712 0.328 0.089 n y n ruditapes_c20488 -? 0.712 0.136 0 n y n ruditapes_c10493 -1.189 0.713 nucleoside diphosphate kinase homolog 5 (ndk-h 5) (ndp kinase homolog 5) (nm23-h5) (testis-specific nm23 homolog) (inhibitor of p53-induced apoptosis-beta) (ipia-beta) /// 0009209 // pyrimidine ribonucleoside triphosphate biosynthetic process /// 0006916 // anti-apoptosis /// 0004550 // nucleoside diphosphate kinase activity /// 0007286 // spermatid development /// 0009116 // nucleoside metabolic process 10.698 8.999 n n n ruditapes_c15734 -1.199 0.713 9.772 8.153 n n n ruditapes2_c3010 -1.235 0.713 tho complex 5 7.195 5.824 n n n ruditapes_c29684 -1.272 0.713 5.576 4.382 n n n ruditapes2_c1069 -1.28 0.713 5.345 4.176 n n n ruditapes_c20339 -1.28 0.713 5.332 4.166 n n n ruditapes2_c2166 1.309 0.713 3.097 4.055 n n n ruditapes_c5235 1.349 0.713 2.497 3.369 n n n ruditapes_c9089 -1.324 0.713 4.178 3.156 n n n ruditapes_c28398 -1.483 0.713 2.217 1.495 n n n ruditapes_c17471 1.699 0.713 sc blase (phospholipid scramblase) family member (scrm-1) 0.728 1.237 n y n ruditapes_c24288 -1.631 0.713 1.501 0.921 n y n ruditapes_c18854 -1.647 0.713 lin-52 homolog /// 0005730 // nucleolus /// 0005737 // cytoplasm 1.45 0.88 n y n ruditapes2_lrc4512 2.099 0.713 galectin 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.342 0.718 n y n ruditapes_c25125 2.136 0.713 0.323 0.69 n y n ruditapes_c12013 -1.853 0.713 1.004 0.542 n y n ruditapes_c26342 2.923 0.713 0.142 0.415 n y n ruditapes_c27467 -2.224 0.713 0.657 0.296 n y n ruditapes2_lrc5624 -2.224 0.713 0.656 0.295 n y n ruditapes_c14978 -2.224 0.713 0.656 0.295 n y n ruditapes_c19445 -2.669 0.713 cytochrome p450 2j2 0.482 0.181 n y n ruditapes_lrc15547 -2.78 0.713 0.454 0.163 n y n ruditapes_lrc38610 ? 0.713 kallikrein plasma (fletcher factor) 1 0 0.136 n y n ruditapes_s37549 ? 0.713 nadh dehydrogenase 1 beta 18kda /// 0005743 // mitochondrial inner membrane 0 0.136 n y n ruditapes2_c881 ? 0.713 0 0.135 n y n ruditapes2_lrc3298 ? 0.713 cysteine and glycine-rich protein 1 /// 0005856 // cytoskeleton /// 0032501 // multicellular organismal process /// 0046872 // metal ion binding /// 0005515 // protein binding /// 0032502 // developmental process /// 0005737 // cytoplasm /// 0009987 // cellular process 0 0.135 n y n ruditapes_c22037 ? 0.713 0 0.135 n y n ruditapes_c27444 ? 0.713 0 0.135 n y n ruditapes_c7482 ? 0.713 0 0.135 n y n ruditapes_lrc36840 ? 0.713 0 0.135 n y n ruditapes_lrc34237 -3.336 0.713 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.362 0.108 n y n ruditapes2_c1884 -3.706 0.713 0.326 0.088 n y n ruditapes_lrc32174 -? 0.713 mgc64417 protein 0.135 0 n y n ruditapes2_c1049 1.072 0.714 44.304 47.504 n n n ruditapes_c26328 -1.11 0.714 29.661 26.718 n n n ruditapes2_c1801 -1.143 0.714 17.785 15.555 n n n ruditapes_c19392 -1.148 0.714 16.811 14.647 n n n ruditapes_c12809 -1.195 0.714 9.973 8.343 n n n ruditapes2_c1864 -1.207 0.714 8.959 7.42 n n n ruditapes2_c3047 1.277 0.714 rhamnospondin 1 /// 0005488 // binding 3.78 4.826 n n n ruditapes2_c2053 1.3 0.714 3.268 4.248 n n n ruditapes_c14288 1.373 0.714 2.2 3.021 n n n ruditapes_c30082 -1.425 0.714 2.665 1.871 n n n ruditapes_c9768 -1.464 0.714 2.322 1.585 n n n ruditapes_c18143 -1.466 0.714 2.322 1.584 n n n ruditapes_c8125 -1.531 0.714 chromosome 2 open reading frame 49 1.904 1.243 n y n ruditapes_c29074 -1.55 0.714 1.811 1.169 n y n ruditapes_c7905 1.863 0.714 transmembrane emp24 domain-containing protein 10 precursor "/// 0048199 // vesicle targeting, to, from or within Golgi /// 0005801 // cis-Golgi network /// 0005793 // ER-Golgi intermediate compartment /// 0015031 // protein transport /// 0045055 // regulated secretory pathway /// 0005515 // protein binding /// 0042589 // zymogen granule membrane /// 0042470 // melanosome /// 0016021 // integral to membrane /// 0005792 // microsome /// 0000139 // Golgi membrane" 0.505 0.94 n y n ruditapes_c27281 -1.687 0.714 1.318 0.781 n y n ruditapes_c19794 -1.694 0.714 1.306 0.771 n y n ruditapes_c19021 2.398 0.714 0.231 0.554 n y n ruditapes_c14557 2.698 0.714 0.17 0.458 n y n ruditapes2_c772 -2.224 0.714 0.653 0.294 n y n ruditapes_c15565 -2.224 0.714 0.653 0.294 n y n ruditapes_c23806 -2.224 0.714 0.651 0.293 n y n ruditapes_c20479 ? 0.714 transcription elongation factor b polypeptide 3 binding protein 1 0 0.135 n y n ruditapes_c28509 ? 0.714 0 0.135 n y n ruditapes2_c2306 ? 0.714 0 0.134 n y n ruditapes2_lrc5710 ? 0.714 0 0.134 n y n ruditapes_c17146 ? 0.714 0 0.134 n y n ruditapes_c23282 ? 0.714 0 0.134 n y n ruditapes_c15211 -4.448 0.714 0.275 0.062 n y n ruditapes2_c360 -11.119 0.714 0.177 0.016 n y n ruditapes_lrc32938 1.035 0.715 60s ribosomal protein l10a /// 0030529 // ribonucleoprotein complex /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0044238 // primary metabolic process /// 0000003 // reproduction /// 0005515 // protein binding /// 0010467 // gene expression /// 0034960 // cellular biopolymer metabolic process /// 0009792 // embryonic development ending in birth or egg hatching 152.008 157.372 n n n ruditapes2_c378 -1.088 0.715 45.803 42.087 n n n ruditapes2_c2436 -1.104 0.715 33.354 30.222 n n n ruditapes_c30671 -1.212 0.715 splicing factor 4 "/// 0005730 // nucleolus /// 0000398 // nuclear mRNA splicing, via spliceosome" 8.566 7.068 n n n ruditapes_c8845 1.295 0.715 3.346 4.334 n n n ruditapes_c24871 -1.291 0.715 peroxisomal -enoyl- isomerase /// 0005739 // mitochondrion /// 0000062 // acyl-CoA binding /// 0008152 // metabolic process /// 0016853 // isomerase activity 4.913 3.805 n n n ruditapes2_c1665 -1.321 0.715 4.169 3.155 n n n ruditapes_c20819 1.388 0.715 2.028 2.815 n n n ruditapes_lrc32722 -1.353 0.715 ribosomal protein l7 /// 0015934 // large ribosomal subunit /// 0030528 // transcription regulator activity /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.557 2.63 n n n ruditapes_c22391 1.426 0.715 solute carrier family 1 (glial high affinity glutamate transporter) member 3 /// 0006835 // dicarboxylic acid transport /// 0017153 // sodium:dicarboxylate symporter activity /// 0005886 // plasma membrane /// 0005313 // L-glutamate transmembrane transporter activity /// 0042995 // cell projection 1.718 2.45 n n n ruditapes_c6434 -1.435 0.715 2.552 1.779 n n n ruditapes_c26097 -1.441 0.715 2.504 1.737 n n n ruditapes_s37812 1.619 0.715 glutathione s-transferase c 0.886 1.434 n y n ruditapes_c23162 -1.509 0.715 2.018 1.338 n y n ruditapes_lrc37774 1.66 0.715 ribosomal protein s3 0.79 1.312 n y n ruditapes_c7276 -1.554 0.715 protein 1.773 1.141 n y n ruditapes2_c831 1.754 0.715 polcalcin jun o 2 0.631 1.106 n y n ruditapes_c21155 -1.668 0.715 1.37 0.821 n y n ruditapes_c8353 2.136 0.715 0.32 0.683 n y n ruditapes_c13646 -1.807 0.715 1.065 0.59 n y n ruditapes_c25850 2.361 0.715 0.239 0.563 n y n ruditapes_c4339 -1.873 0.715 0.959 0.512 n y n ruditapes_c28413 2.698 0.715 meiosis specific nuclear structure protein 0.169 0.457 n y n ruditapes2_lrc6250 3.597 0.715 glutathione s-transferase /// 0005515 // protein binding 0.09 0.324 n y n ruditapes_c11343 -2.224 0.715 sumo sentrin specific peptidase family member 8 /// 0008234 // cysteine-type peptidase activity /// 0005515 // protein binding 0.649 0.292 n y n ruditapes_c18258 4.047 0.715 0.072 0.292 n y n ruditapes_c12152 -2.669 0.715 0.473 0.177 n y n ruditapes_c21496 ? 0.715 0 0.134 n y n ruditapes_c6245 ? 0.715 0 0.134 n y n ruditapes_c11745 ? 0.715 mgc83537 protein /// 0003824 // catalytic activity 0 0.133 n y n ruditapes_c12767 ? 0.715 0 0.133 n y n ruditapes_c17427 ? 0.715 0 0.133 n y n ruditapes_c19970 ? 0.715 0 0.133 n y n ruditapes_c24110 ? 0.715 0 0.133 n y n ruditapes_c30609 ? 0.715 0 0.133 n y n ruditapes_c15060 -3.706 0.715 0.319 0.086 n y n ruditapes_c1950 -4.448 0.715 0.273 0.061 n y n ruditapes_c26912 -5.559 0.715 0.235 0.042 n y n ruditapes_c5783 -? 0.715 0.134 0 n y n ruditapes2_c2749 -? 0.715 0.133 0 n y n ruditapes_c9529 1.166 0.716 9.529 11.109 n n n ruditapes_c18523 1.178 0.716 8.421 9.919 n n n ruditapes_c13434 -1.221 0.716 7.857 6.436 n n n ruditapes2_lrc4807 1.26 0.716 4.157 5.24 n n n ruditapes2_c3204 1.373 0.716 mitochondrial ribosomal protein l9 /// 0005622 // intracellular 2.166 2.975 n n n ruditapes2_c3662 -1.573 0.716 calmodulin /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004687 // myosin light chain kinase activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0004721 // phosphoprotein phosphatase activity /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0008270 // zinc ion binding /// 0000287 // magnesium ion binding /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005506 // iron ion binding /// 0005509 // calcium ion binding /// 0018298 // protein-chromophore linkage /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 1.685 1.071 n y n ruditapes_c21713 -1.644 0.716 1.43 0.87 n y n ruditapes_c4728 2.024 0.716 0.375 0.759 n y n ruditapes_c10631 -1.906 0.716 0.909 0.477 n y n ruditapes_c23336 2.698 0.716 doublesex and mab-3 related transcription factor-like protein 0.167 0.452 n y n ruditapes_c2643 -2.001 0.716 0.808 0.404 n y n ruditapes2_c1458 -2.022 0.716 hypothetical protein BRAFLDRAFT_277105 [Branchiostoma floridae] 0.786 0.389 n y n ruditapes2_c1907 4.047 0.716 0.072 0.29 n y n ruditapes_c16920 ? 0.716 0 0.133 n y n ruditapes2_c5952 ? 0.716 0 0.132 n y n ruditapes_c14507 ? 0.716 0 0.132 n y n ruditapes_c8745 ? 0.716 0 0.132 n y n ruditapes2_c3467 -3.892 0.716 caveolin 1 /// 0044444 // cytoplasmic part /// 0005515 // protein binding /// 0048513 // organ development /// 0048878 // chemical homeostasis /// 0044459 // plasma membrane part /// 0009968 // negative regulation of signal transduction /// 0045121 // membrane raft /// 0007243 // protein kinase cascade 0.303 0.078 n y n ruditapes_c12761 -? 0.716 0.133 0 n y n ruditapes_c4165 -? 0.716 macrophage receptor with collagenous structure /// 0016020 // membrane /// 0007165 // signal transduction /// 0004872 // receptor activity 0.133 0 n y n ruditapes_c5871 -? 0.716 0.133 0 n y n ruditapes_s38719 -? 0.716 0.133 0 n y n ruditapes_c25791 -? 0.716 0.132 0 n y n ruditapes_c27999 -? 0.716 0.132 0 n y n ruditapes_c4577 -? 0.716 0.132 0 n y n ruditapes_c18322 -1.067 0.717 79.108 74.106 n n n ruditapes_c25842 1.163 0.717 9.721 11.31 n n n ruditapes2_c2036 -1.197 0.717 9.607 8.028 n n n ruditapes2_c1409 -1.219 0.717 7.937 6.511 n n n ruditapes_c24026 -1.223 0.717 7.693 6.29 n n n ruditapes2_c863 1.261 0.717 thioester-containing protein /// 0005576 // extracellular region 4.116 5.192 n n n ruditapes_c20480 1.331 0.717 2.672 3.558 n n n ruditapes_c7273 1.343 0.717 endo-beta- -glucanase /// 0003824 // catalytic activity 2.508 3.368 n n n ruditapes2_c1684 -1.324 0.717 4.037 3.05 n n n ruditapes2_c6227 -1.354 0.717 3.494 2.581 n n n ruditapes_c27568 -1.365 0.717 3.34 2.448 n n n ruditapes_c18757 -1.61 0.717 1.522 0.945 n y n ruditapes_c21135 1.979 0.717 0.401 0.794 n y n ruditapes2_lrc5075 2.024 0.717 0.371 0.752 n y n ruditapes_c19310 -1.73 0.717 1.193 0.69 n y n ruditapes2_lrc4097 2.158 0.717 cytochrome c oxidase subunit viic 0.304 0.656 n y n ruditapes_c12226 -2.224 0.717 0.639 0.287 n y n ruditapes_lrc36746 -2.965 0.717 ferritin /// 0005488 // binding 0.405 0.137 n y n ruditapes_c23968 -2.965 0.717 0.404 0.136 n y n ruditapes2_c1052 ? 0.717 0 0.132 n y n ruditapes2_c624 ? 0.717 0 0.131 n y n ruditapes_c15403 ? 0.717 0 0.131 n y n ruditapes_lrc16793 ? 0.717 0 0.131 n y n ruditapes_lrc33639 -3.706 0.717 0.316 0.085 n y n ruditapes_lrc32773 -6.671 0.717 0.21 0.032 n y n ruditapes_c30347 -8.895 0.717 0.185 0.021 n y n ruditapes2_c2500 -? 0.717 cysteine-rich secretory protein- 0.132 0 n y n ruditapes_c4184 -? 0.717 qvr_drops ame: full=protein quiver ame: full=protein sleepless flags: precursor 0.132 0 n y n ruditapes_lrc31893 -? 0.717 glutathione s-transferase pi-class 0.132 0 n y n ruditapes2_c3730 -? 0.717 sybindin-like family protein 0.131 0 n y n ruditapes_c16005 -? 0.717 0.131 0 n y n ruditapes_lrc28988 -? 0.717 0.131 0 n y n ruditapes_c13360 1.056 0.718 66.553 70.31 n n n ruditapes2_c2703 -1.207 0.718 8.697 7.206 n n n ruditapes_c8340 -1.227 0.718 7.434 6.061 n n n ruditapes_c8577 1.349 0.718 2.401 3.239 n n n ruditapes_c31431 1.359 0.718 polymerase iii (dna directed) polypeptide b /// 0046872 // metal ion binding /// 0016779 // nucleotidyltransferase activity 2.289 3.111 n n n ruditapes2_lrc7374 -1.355 0.718 3.454 2.549 n n n ruditapes_lrc19320 -1.483 0.718 2.131 1.437 n n n ruditapes_c23361 -1.483 0.718 2.126 1.434 n n n ruditapes_lrc20691 -1.483 0.718 2.126 1.434 n n n ruditapes_c37767 1.638 0.718 elongation factor 2 0.823 1.349 n y n ruditapes_lrc31524 1.764 0.718 0.606 1.069 n y n ruditapes2_c1887 -1.668 0.718 1.338 0.802 n y n ruditapes_c17705 -1.668 0.718 1.334 0.8 n y n ruditapes_c28602 -1.756 0.718 1.128 0.642 n y n ruditapes_c21719 -2.022 0.718 0.778 0.385 n y n ruditapes_c26794 -2.224 0.718 0.636 0.286 n y n ruditapes_c15880 -2.594 0.718 0.485 0.187 n y n ruditapes_c23532 -2.78 0.718 0.438 0.157 n y n ruditapes_s35455 -2.78 0.718 0.437 0.157 n y n ruditapes2_lrc4435 ? 0.718 member of ras oncogene family-like 4 0 0.131 n y n ruditapes_c23164 ? 0.718 0 0.131 n y n ruditapes2_lrc6709 ? 0.718 hypothetical protein BRAFLDRAFT_125501 [Branchiostoma floridae] 0 0.13 n y n ruditapes_c3357 ? 0.718 0 0.13 n y n ruditapes_c541 ? 0.718 0 0.13 n y n ruditapes_c8194 ? 0.718 serologically defined colon cancer antigen 1 0 0.13 n y n ruditapes_c24749 -3.336 0.718 chorion peroxidase 0.349 0.105 n y n ruditapes_c8975 -3.706 0.718 calcium binding egf domain containing protein 0.312 0.084 n y n ruditapes_c19447 -6.671 0.718 glutamate decarboxylase 1 0.208 0.031 n y n ruditapes_c23726 -? 0.718 0.13 0 n y n ruditapes_c24072 -? 0.718 hypothetical protein BRAFLDRAFT_86472 [Branchiostoma floridae] 0.13 0 n y n ruditapes_c9041 1.109 0.719 20.232 22.44 n n n ruditapes2_c1117 -1.169 0.719 12.579 10.761 n n n ruditapes_c7402 -1.261 0.719 5.765 4.572 n n n ruditapes2_c1477 1.282 0.719 3.535 4.53 n n n ruditapes_c19848 -1.264 0.719 5.643 4.464 n n n ruditapes_c1981 1.287 0.719 3.426 4.408 n n n ruditapes_c21929 1.286 0.719 3.421 4.401 n n n ruditapes_c21932 -1.283 0.719 4.998 3.894 n n n ruditapes_c35260 1.349 0.719 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 2.397 3.234 n n n ruditapes_s40252 -1.73 0.719 taf10 rna polymerase tata box binding protein -associated factor /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.18 0.682 n y n ruditapes_c15227 2.158 0.719 cd4-specific ankyrin repeat protein 0.3 0.648 n y n ruditapes_c23947 2.473 0.719 0.205 0.506 n y n ruditapes_c12869 -2.065 0.719 0.738 0.357 n y n ruditapes_s39443 3.597 0.719 0.088 0.316 n y n ruditapes2_lrc4733 -2.224 0.719 0.628 0.282 n y n ruditapes_c26774 ? 0.719 0 0.129 n y n ruditapes_c27241 ? 0.719 0 0.129 n y n ruditapes_c31336 ? 0.719 0 0.129 n y n ruditapes_c3237 ? 0.719 0 0.129 n y n ruditapes_c15226 -3.336 0.719 0.346 0.104 n y n ruditapes_c15943 -4.448 0.719 0.266 0.06 n y n ruditapes2_lrc3019 -? 0.719 cytochrome c oxidase subunit viic 0.129 0 n y n ruditapes_lrc32692 1.059 0.72 laminin receptor 1 /// 0005624 // membrane fraction /// 0043236 // laminin binding /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0004872 // receptor activity 60.042 63.603 n n n ruditapes_lrc10536 -1.114 0.72 26.452 23.744 n n n ruditapes_c9064 -1.13 0.72 20.619 18.252 n n n ruditapes_lrc38525 -1.132 0.72 19.836 17.523 n n n ruditapes_c16836 -1.259 0.72 5.811 4.616 n n n ruditapes_c16013 -1.277 0.72 5.152 4.033 n n n ruditapes_c14540 -1.38 0.72 3.045 2.206 n n n ruditapes_c31359 1.48 0.72 1.332 1.972 n n n ruditapes2_c524 1.538 0.72 1.091 1.678 n y n ruditapes_c15160 -1.461 0.72 fibropellin ia 2.256 1.544 n n n ruditapes_c23723 -1.466 0.72 2.224 1.518 n n n ruditapes_c11101 -1.506 0.72 1.955 1.298 n y n ruditapes_c17629 -1.597 0.72 selenoprotein 1 /// 0016491 // oxidoreductase activity /// 0005737 // cytoplasm 1.534 0.961 n y n ruditapes_c23542 -1.601 0.72 1.521 0.95 n y n ruditapes_c25816 -1.639 0.72 1.398 0.853 n y n ruditapes_c9095 1.911 0.72 0.443 0.847 n y n ruditapes_c27458 -1.705 0.72 1.222 0.717 n y n ruditapes_lrc36561 2.056 0.72 60s ribosomal protein l13 /// 0051726 // regulation of cell cycle /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.347 0.714 n y n ruditapes2_c3068 -1.736 0.72 transposase 1.157 0.666 n y n ruditapes2_lrc2825 -1.747 0.72 1.134 0.649 n y n ruditapes2_lrc5122 -1.927 0.72 0.863 0.448 n y n ruditapes2_c5563 2.848 0.72 cytochrome c oxidase subunit ii /// 0044464 // cell part 0.143 0.409 n y n ruditapes_c17420 -2.022 0.72 0.764 0.378 n y n ruditapes_c1870 -2.022 0.72 0.764 0.378 n y n ruditapes_c11378 3.148 0.72 0.114 0.36 n y n ruditapes_c19424 -2.076 0.72 0.724 0.349 n y n ruditapes_c26246 -2.224 0.72 0.624 0.28 n y n ruditapes_lrc33702 -2.78 0.72 0.432 0.155 n y n ruditapes_c7022 -2.965 0.72 0.396 0.134 n y n ruditapes_c23020 -2.965 0.72 0.394 0.133 n y n ruditapes2_lrc5052 ? 0.72 centrin3e-from-infraciliary lattice 0 0.129 n y n ruditapes_c10448 ? 0.72 alcohol dehydrogenase class-3 /// 0051775 // response to redox state /// 0044237 // cellular metabolic process /// 0005504 // fatty acid binding /// 0051903 // S-(hydroxymethyl)glutathione dehydrogenase activity /// 0044238 // primary metabolic process /// 0018467 // formaldehyde dehydrogenase activity /// 0005737 // cytoplasm /// 0008270 // zinc ion binding /// 0003008 // system process /// 0009055 // electron carrier activity 0 0.129 n y n ruditapes_c11558 ? 0.72 cg33099 cg33099-pa 0 0.129 n y n ruditapes_c15914 ? 0.72 0 0.129 n y n ruditapes_c24970 ? 0.72 0 0.129 n y n ruditapes_c25336 ? 0.72 0 0.129 n y n ruditapes_c8656 ? 0.72 complement component q subcomponent-like 4 0 0.129 n y n ruditapes_lrc9695 ? 0.72 cysteine protease inhibitor 0 0.129 n y n ruditapes2_lrc4145 ? 0.72 fad linked oxidase domain-containing protein 0 0.128 n y n ruditapes_c13088 ? 0.72 wd sterile alpha motif and u-box domain containing 1 /// 0000151 // ubiquitin ligase complex /// 0016567 // protein ubiquitination /// 0004842 // ubiquitin-protein ligase activity 0 0.128 n y n ruditapes_c26370 ? 0.72 0 0.128 n y n ruditapes_c30069 ? 0.72 0 0.128 n y n ruditapes_c33135 ? 0.72 mgc79752 protein 0 0.128 n y n ruditapes_c8748 -3.177 0.72 0.363 0.114 n y n ruditapes_lrc36011 -4.448 0.72 0.263 0.059 n y n ruditapes_c11759 -6.671 0.72 0.205 0.031 n y n ruditapes_c10890 -? 0.72 0.129 0 n y n ruditapes_c10875 -? 0.72 0.128 0 n y n ruditapes2_c2638 1.101 0.721 22.983 25.305 n n n ruditapes_c31151 -1.144 0.721 16.837 14.722 n n n ruditapes_c954 1.195 0.721 6.827 8.158 n n n ruditapes_c5835 -1.251 0.721 6.079 4.86 n n n ruditapes_c30688 -1.254 0.721 5.926 4.726 n n n ruditapes_lrc23887 -1.274 0.721 5.177 4.062 n n n ruditapes_lrc22505 -1.306 0.721 4.3 3.292 n n n ruditapes_c17954 -1.324 0.721 3.931 2.969 n n n ruditapes_c10821 1.4 0.721 1.834 2.568 n n n ruditapes_c21115 1.51 0.721 1.19 1.797 n y n ruditapes_c26225 -1.427 0.721 2.517 1.765 n n n ruditapes_c25833 -1.456 0.721 2.282 1.568 n n n ruditapes_c26621 -1.459 0.721 2.243 1.537 n n n ruditapes_c13825 1.587 0.721 scavenger receptor cysteine-rich protein 0.933 1.48 n y n ruditapes_c10377 -1.483 0.721 hypothetical protein TRIADDRAFT_61535 [Trichoplax adhaerens] 2.088 1.409 n n n ruditapes_c26531 -1.509 0.721 1.923 1.274 n y n ruditapes_c23989 -1.54 0.721 1.761 1.144 n y n ruditapes_c12425 -1.55 0.721 1.723 1.112 n y n ruditapes_c23091 -1.55 0.721 1.716 1.107 n y n ruditapes_c15279 -1.57 0.721 predicted protein [Nematostella vectensis] 1.632 1.04 n y n ruditapes2_c1790 -1.581 0.721 delta-like 4 protein 1.581 1 n y n ruditapes_c13728 -1.668 0.721 1.309 0.785 n y n ruditapes_c6732 -1.764 0.721 1.094 0.621 n y n ruditapes_c21222 -1.882 0.721 mitogen-activated protein kinase kinase kinase 7 interacting protein 3 /// 0005515 // protein binding 0.911 0.484 n y n ruditapes_c27391 -1.977 0.721 0.801 0.405 n y n ruditapes_c21143 3.597 0.721 0.086 0.311 n y n ruditapes_lrc19659 -2.224 0.721 glutathione s-transferase pi-class /// 0016740 // transferase activity 0.619 0.278 n y n ruditapes_lrc36604 -2.541 0.721 0.491 0.193 n y n ruditapes_c29878 ? 0.721 0 0.128 n y n ruditapes_c31601 ? 0.721 0 0.128 n y n ruditapes_c9263 ? 0.721 0 0.128 n y n ruditapes_lrc39442 ? 0.721 0 0.128 n y n ruditapes_c18584 ? 0.721 0 0.127 n y n ruditapes_c315 ? 0.721 0 0.127 n y n ruditapes_lrc37438 -3.336 0.721 atpase mitochondrial 0.34 0.102 n y n ruditapes_c26130 -3.706 0.721 0.307 0.083 n y n ruditapes_c28112 -4.448 0.721 0.262 0.059 n y n ruditapes_c13445 -? 0.721 0.128 0 n y n ruditapes_c8416 -? 0.721 0.128 0 n y n ruditapes_c19462 -1.115 0.722 25.375 22.748 n n n ruditapes2_lrc3501 1.139 0.722 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 12.652 14.412 n n n ruditapes_c6970 -1.262 0.722 5.573 4.416 n n n ruditapes_lrc36572 1.314 0.722 2.843 3.735 n n n ruditapes_c2539 -1.334 0.722 3.694 2.769 n n n ruditapes_lrc35500 -1.355 0.722 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 3.339 2.464 n n n ruditapes_c31546 -1.368 0.722 3.163 2.311 n n n ruditapes_c15577 1.439 0.722 1.546 2.225 n n n ruditapes_c2501 -1.421 0.722 apextrin 2.546 1.792 n n n ruditapes_c16354 1.66 0.722 0.755 1.254 n y n ruditapes_c16801 1.855 0.722 0.486 0.902 n y n ruditapes_c24446 -1.701 0.722 1.213 0.713 n y n ruditapes_c9972 -1.718 0.722 1.177 0.685 n y n ruditapes_c24090 -1.882 0.722 0.901 0.479 n y n ruditapes_lrc32766 -1.977 0.722 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.798 0.404 n y n ruditapes_c13074 -2.001 0.722 0.772 0.386 n y n ruditapes_c29991 -2.001 0.722 0.77 0.385 n y n ruditapes_c12643 -2.038 0.722 0.743 0.364 n y n ruditapes_c9124 -2.224 0.722 0.617 0.277 n y n ruditapes_lrc34504 4.047 0.722 hypothetical protein [Paramecium tetraurelia strain d4-2] 0.068 0.277 n y n ruditapes_c14461 -2.669 0.722 0.45 0.169 n y n ruditapes_c8663 -2.669 0.722 gtp-binding adp-ribosylation factor /// 0007264 // small GTPase mediated signal transduction /// 0005525 // GTP binding /// 0005622 // intracellular 0.45 0.169 n y n ruditapes_c12228 -2.78 0.722 caprin family member 2 /// 0005737 // cytoplasm /// 0040008 // regulation of growth 0.423 0.152 n y n ruditapes_c12346 ? 0.722 0 0.127 n y n ruditapes_c36351 ? 0.722 0 0.127 n y n ruditapes_lrc31706 ? 0.722 0 0.127 n y n ruditapes_c13680 ? 0.722 0 0.126 n y n ruditapes_c21081 ? 0.722 0 0.126 n y n ruditapes_c24035 ? 0.722 0 0.126 n y n ruditapes_s36552 ? 0.722 0 0.126 n y n ruditapes_c17273 -3.706 0.722 PREDICTED: hypothetical protein [Ciona intestinalis] 0.305 0.082 n y n ruditapes_c11856 -3.892 0.722 0.291 0.075 n y n ruditapes_c3675 -1.238 0.723 6.588 5.323 n n n ruditapes_c7786 -1.238 0.723 6.533 5.277 n n n ruditapes_c11678 -1.283 0.723 sh3-domain grb2-like endophilin b2 /// 0005515 // protein binding /// 0005737 // cytoplasm 4.842 3.774 n n n ruditapes_c9631 -1.361 0.723 myosin ixa /// 0005488 // binding /// 0044464 // cell part 3.242 2.382 n n n ruditapes_c17496 -1.361 0.723 3.229 2.373 n n n ruditapes_lrc34802 -1.423 0.723 2.51 1.763 n n n ruditapes_c20546 1.536 0.723 dph1 protein /// 0008283 // cell proliferation /// 0005515 // protein binding /// 0006412 // translation /// 0007049 // cell cycle /// 0044424 // intracellular part 1.075 1.652 n y n ruditapes_c6053 -1.443 0.723 2.334 1.617 n n n ruditapes_c4168 -1.498 0.723 1.968 1.314 n n n ruditapes_c15108 1.664 0.723 ubiquitin-like protein 0.742 1.234 n y n ruditapes_c8183 -1.529 0.723 1.795 1.174 n y n ruditapes2_c6830 -1.534 0.723 1.763 1.15 n y n ruditapes_c31031 1.749 0.723 0.601 1.052 n y n ruditapes_c13247 -1.588 0.723 1.534 0.966 n y n ruditapes_s39679 1.874 0.723 PREDICTED: similar to GA20453-PA [Nasonia vitripennis] 0.465 0.871 n y n ruditapes_c2587 -1.74 0.723 sparc cwcv and kazal-like domains proteoglycan 1 /// 0007275 // multicellular organismal development /// 0009987 // cellular process 1.119 0.643 n y n ruditapes2_c2023 2.158 0.723 0.29 0.626 n y n ruditapes_c2009 -1.843 0.723 hypothetical protein BRAFLDRAFT_117369 [Branchiostoma floridae] 0.947 0.514 n y n ruditapes_c24255 -1.882 0.723 0.892 0.474 n y n ruditapes_c21077 -2.224 0.723 0.612 0.275 n y n ruditapes_lrc24401 -2.224 0.723 0.612 0.275 n y n ruditapes_c12618 -2.446 0.723 0.514 0.21 n y n ruditapes_c20474 -2.965 0.723 0.387 0.131 n y n ruditapes2_lrc3664 -2.965 0.723 0.386 0.13 n y n ruditapes2_lrc3860 ? 0.723 wsc domain 0 0.126 n y n ruditapes_c14753 ? 0.723 0 0.126 n y n ruditapes_c17450 ? 0.723 0 0.126 n y n ruditapes_c27504 ? 0.723 loc560667 protein /// 0010181 // FMN binding /// 0016491 // oxidoreductase activity /// 0009055 // electron carrier activity /// 0005506 // iron ion binding 0 0.126 n y n ruditapes_c30916 ? 0.723 0 0.126 n y n ruditapes_c8641 ? 0.723 0 0.126 n y n ruditapes_c16395 ? 0.723 0 0.125 n y n ruditapes_c19858 ? 0.723 0 0.125 n y n ruditapes_c8474 ? 0.723 0 0.125 n y n ruditapes_s39719 -3.336 0.723 0.335 0.101 n y n ruditapes_c22970 -? 0.723 0.125 0 n y n ruditapes2_c110 1.055 0.724 67.113 70.788 n n n ruditapes_c10672 -1.253 0.724 5.814 4.638 n n n ruditapes_c8863 1.341 0.724 isoform c "/// 0007265 // Ras protein signal transduction /// 0046328 // regulation of JNK cascade /// 0003779 // actin binding /// 0005915 // zonula adherens /// 0005938 // cell cortex /// 0007394 // dorsal closure, elongation of leading edge cells /// 0016318 // ommatidial rotation /// 0007219 // Notch signaling pathway" 2.4 3.217 n n n ruditapes_c26077 -1.368 0.724 3.115 2.276 n n n ruditapes_c12398 1.455 0.724 1.423 2.071 n n n ruditapes_c25761 1.456 0.724 1.42 2.068 n n n ruditapes_c87 1.499 0.724 1.216 1.823 n n n ruditapes_c15895 1.574 0.724 0.946 1.488 n y n ruditapes_c20880 -1.54 0.724 translin-associated factor x /// 0032502 // developmental process /// 0005737 // cytoplasm /// 0031687 // A2A adenosine receptor binding 1.73 1.124 n y n ruditapes_c29216 -1.557 0.724 1.647 1.058 n y n ruditapes_lrc37779 1.758 0.724 0.584 1.027 n y n ruditapes_c17684 -1.588 0.724 1.528 0.962 n y n ruditapes_c741 1.799 0.724 salivary c-type lectin 0.534 0.96 n y n ruditapes2_c444 1.855 0.724 proline-rich transmembrane protein 1 0.478 0.886 n y n ruditapes_s39429 -1.819 0.724 0.972 0.534 n y n ruditapes_c16680 2.361 0.724 0.223 0.527 n y n ruditapes_c20848 3.597 0.724 0.084 0.303 n y n ruditapes_lrc33379 4.497 0.724 ependymin related protein-1 0.056 0.251 n y n ruditapes_lrc35348 -2.78 0.724 0.42 0.151 n y n ruditapes2_lrc4455 ? 0.724 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation /// 0009312 // oligosaccharide biosynthetic process /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity 0 0.125 n y n ruditapes_c1704 ? 0.724 0 0.124 n y n ruditapes2_c2860 -? 0.724 0.125 0 n y n ruditapes_c20979 -? 0.724 0.125 0 n y n ruditapes_c25957 -? 0.724 0.124 0 n y n ruditapes_c8962 -? 0.724 0.124 0 n y n ruditapes_c8592 1.068 0.725 45.176 48.264 n n n ruditapes_c8761 -1.203 0.725 8.6 7.151 n n n ruditapes_c29935 1.266 0.725 3.749 4.745 n n n ruditapes_c12359 -1.253 0.725 5.811 4.638 n n n ruditapes_c9185 1.317 0.725 2.712 3.571 n n n ruditapes2_lrc2442 1.385 0.725 1.918 2.656 n n n ruditapes_c26085 1.388 0.725 1.881 2.611 n n n ruditapes_c1269 -1.397 0.725 2.727 1.952 n n n ruditapes_c4009 -1.422 0.725 2.479 1.743 n n n ruditapes_c18229 -1.464 0.725 2.144 1.464 n n n ruditapes_c13659 -1.54 0.725 1.713 1.113 n y n ruditapes_c18825 -1.557 0.725 cd209e antigen 1.642 1.055 n y n ruditapes_c14304 -1.73 0.725 1.126 0.651 n y n ruditapes_c30319 2.586 0.725 0.174 0.45 n y n ruditapes2_lrc6098 2.698 0.725 ribosomal protein s20 /// 0030529 // ribonucleoprotein complex 0.157 0.423 n y n ruditapes_c12969 3.597 0.725 endonuclease reverse transcriptase 0.084 0.302 n y n ruditapes_c5413 4.497 0.725 0.055 0.249 n y n ruditapes_s37714 -2.594 0.725 atp synthase subunit mitochondrial 0.458 0.177 n y n ruditapes2_lrc6403 ? 0.725 glutathione s-transferase /// 0005515 // protein binding 0 0.124 n y n ruditapes_c17024 ? 0.725 cg14446 cg14446-pa 0 0.124 n y n ruditapes_c7708 ? 0.725 cytoglobin /// 0005488 // binding 0 0.124 n y n ruditapes_c21127 ? 0.725 0 0.123 n y n ruditapes_c28146 -3.336 0.725 0.331 0.099 n y n ruditapes2_c196 -3.558 0.725 type alpha isoform cra_b 0.31 0.087 n y n ruditapes_c13459 -3.706 0.725 hypothetical protein BRAFLDRAFT_97278 [Branchiostoma floridae] 0.298 0.08 n y n ruditapes_lrc8216 -4.448 0.725 0.254 0.057 n y n ruditapes_c16277 -6.671 0.725 0.198 0.03 n y n ruditapes_c12358 -6.671 0.725 isoform b 0.197 0.03 n y n ruditapes_c18783 -? 0.725 0.124 0 n y n ruditapes_c25146 -? 0.725 0.124 0 n y n ruditapes_c4556 -1.161 0.726 13.117 11.302 n n n ruditapes_c18996 -1.2 0.726 8.722 7.267 n n n ruditapes2_c3584 -1.24 0.726 myosin heavy chain /// 0005524 // ATP binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0051015 // actin filament binding /// 0005863 // striated muscle thick filament 6.343 5.116 n n n ruditapes_c16206 -1.255 0.726 5.688 4.533 n n n ruditapes_c23772 1.297 0.726 3.031 3.931 n n n ruditapes_c14217 -1.276 0.726 ef-hand calcium binding protein /// 0016020 // membrane 4.975 3.901 n n n ruditapes2_c4392 1.318 0.726 2.685 3.538 n n n ruditapes_lrc37254 -1.291 0.726 thymosin beta-12 4.532 3.51 n n n ruditapes_c17658 1.407 0.726 1.721 2.421 n n n ruditapes_c15698 -1.371 0.726 3.022 2.205 n n n ruditapes_c30119 1.709 0.726 protein (peptidyl-prolyl cis trans isomerase) nima- 4 /// 0005759 // mitochondrial matrix /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.646 1.105 n y n ruditapes2_c618 1.889 0.726 apaf1 interacting protein /// 0046872 // metal ion binding 0.442 0.834 n y n ruditapes2_lrc3206 1.911 0.726 calponin transgelin 0.424 0.81 n y n ruditapes_c13160 -1.644 0.726 1.32 0.803 n y n ruditapes_c23696 2.248 0.726 0.252 0.567 n y n ruditapes_lrc37526 -2.224 0.726 eukaryotic translation initiation factor subunit h /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0005792 // microsome 0.599 0.269 n y n ruditapes_c31576 6.296 0.726 0.032 0.2 n y n ruditapes_c17533 -2.669 0.726 0.438 0.164 n y n ruditapes_c9408 -2.78 0.726 0.411 0.148 n y n ruditapes2_c1055 -2.965 0.726 endonuclease-reverse transcriptase 0.378 0.127 n y n ruditapes_c13308 ? 0.726 calmodulin /// 0019861 // flagellum /// 0005509 // calcium ion binding 0 0.123 n y n ruditapes_c23537 ? 0.726 0 0.123 n y n ruditapes_c29946 ? 0.726 0 0.123 n y n ruditapes_c30369 ? 0.726 0 0.123 n y n ruditapes_lrc32881 ? 0.726 0 0.123 n y n ruditapes_c30887 -? 0.726 0.123 0 n y n ruditapes_lrc31197 -? 0.726 0.123 0 n y n ruditapes_c10702 -1.128 0.727 20.088 17.812 n n n ruditapes_c29829 -1.224 0.727 tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation epsilon polypeptide /// 0021766 // hippocampus development /// 0007242 // intracellular signaling cascade /// 0019904 // protein domain specific binding /// 0006605 // protein targeting /// 0005739 // mitochondrion /// 0001764 // neuron migration /// 0035308 // negative regulation of protein amino acid dephosphorylation /// 0004497 // monooxygenase activity /// 0042470 // melanosome /// 0008426 // protein kinase C inhibitor activity /// 0021987 // cerebral cortex development /// 0019899 // enzyme binding /// 0044419 // interspecies interaction between organisms 7.069 5.775 n n n ruditapes_c23872 1.237 0.727 4.587 5.672 n n n ruditapes2_lrc5682 1.273 0.727 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 3.534 4.497 n n n ruditapes_c8732 -1.329 0.727 stomatin -like 3 3.668 2.76 n n n ruditapes2_lrc4109 -1.334 0.727 basic transcription factor 3-like 4 3.556 2.665 n n n ruditapes_lrc38344 -1.334 0.727 nucleoside diphosphate kinase b /// 0048471 // perinuclear region of cytoplasm /// 0030819 // positive regulation of cAMP biosynthetic process /// 0042127 // regulation of cell proliferation /// 0009201 // ribonucleoside triphosphate biosynthetic process /// 0005739 // mitochondrion /// 0005515 // protein binding /// 0005882 // intermediate filament /// 0043581 // mycelium development /// 0002762 // negative regulation of myeloid leukocyte differentiation /// 0042995 // cell projection /// 0031252 // cell leading edge /// 0004550 // nucleoside diphosphate kinase activity /// 0006165 // nucleoside diphosphate phosphorylation 3.549 2.66 n n n ruditapes_c17969 -1.354 0.727 zgc:174890 protein /// 0005488 // binding 3.242 2.395 n n n ruditapes_c23765 1.421 0.727 ubiquitin carboxyl-terminal hydrolase 15 1.606 2.282 n n n ruditapes_c26847 -1.371 0.727 2.996 2.186 n n n ruditapes_c28055 -1.461 0.727 2.136 1.462 n n n ruditapes_c8017 -1.51 0.727 viral a-type inclusion protein 1.829 1.211 n y n ruditapes_c8164 1.686 0.727 cre- 0.679 1.145 n y n ruditapes_c31073 -1.606 0.727 1.424 0.887 n y n ruditapes_c14289 -1.623 0.727 sperm autoantigenic protein 17 1.377 0.849 n y n ruditapes_c3434 2.136 0.727 glutathione s-transferase 0.292 0.623 n y n ruditapes_c20531 2.698 0.727 0.154 0.416 n y n ruditapes2_c5736 -1.977 0.727 0.767 0.388 n y n ruditapes_c7488 -2.022 0.727 hypothetical protein BRAFLDRAFT_67698 [Branchiostoma floridae] 0.728 0.36 n y n ruditapes_c3356 -2.78 0.727 0.409 0.147 n y n ruditapes_c15281 -2.78 0.727 0.408 0.147 n y n ruditapes_c1990 ? 0.727 short-chain dehydrogenase 0 0.122 n y n ruditapes_c21802 ? 0.727 0 0.122 n y n ruditapes_c25827 ? 0.727 0 0.122 n y n ruditapes2_c390 ? 0.727 0 0.121 n y n ruditapes_c29627 ? 0.727 0 0.121 n y n ruditapes_s39390 ? 0.727 0 0.121 n y n ruditapes_c29835 -3.113 0.727 galactose soluble 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.354 0.114 n y n ruditapes2_lrc2267 -3.336 0.727 0.326 0.098 n y n ruditapes_c6162 -3.336 0.727 mitochondrial atpase 0.326 0.098 n y n ruditapes2_c173 -5.559 0.727 heat shock protein /// 0006950 // response to stress 0.215 0.039 n y n ruditapes2_c2893 -? 0.727 0.122 0 n y n ruditapes_s36845 -? 0.727 0.122 0 n y n ruditapes_c15513 -1.243 0.728 6.089 4.9 n n n ruditapes_c1660 1.284 0.728 3.26 4.185 n n n ruditapes_c20533 1.293 0.728 3.072 3.972 n n n ruditapes_c27544 -1.273 0.728 4.976 3.909 n n n ruditapes2_c130 -1.302 0.728 4.193 3.22 n n n ruditapes2_c3416 -1.309 0.728 proteasome subunit beta type-1-a /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 4.034 3.082 n n n ruditapes_c19148 1.37 0.728 2.009 2.751 n n n ruditapes_c24671 -1.368 0.728 3.018 2.205 n n n ruditapes_c34469 -1.39 0.728 2.746 1.976 n n n ruditapes2_c1947 -1.417 0.728 2.474 1.746 n n n ruditapes_c26449 1.649 0.728 0.742 1.224 n y n ruditapes_c20863 1.67 0.728 0.703 1.174 n y n ruditapes_c16897 1.674 0.728 methionine sulfoxide reductase 0.697 1.166 n y n ruditapes_lrc37234 1.743 0.728 0.587 1.022 n y n ruditapes_c28864 -1.588 0.728 1.479 0.931 n y n ruditapes_c2114 -1.779 0.728 1.005 0.565 n y n ruditapes_c5043 2.248 0.728 proteasome ( macropain) beta 3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 0.247 0.556 n y n ruditapes_c29015 -1.89 0.728 0.851 0.45 n y n ruditapes_c13694 -2.038 0.728 0.709 0.348 n y n ruditapes2_lrc3829 -2.085 0.728 calponin-like protein 0.67 0.322 n y n ruditapes_lrc35321 3.597 0.728 0.082 0.295 n y n ruditapes_c17020 -2.224 0.728 0.59 0.265 n y n ruditapes_c14541 -2.224 0.728 0.587 0.264 n y n ruditapes_c26985 -2.669 0.728 0.431 0.161 n y n ruditapes_c12970 -2.78 0.728 glycosyl-phosphatidylinositol-linked carbonic anhydrase /// 0004089 // carbonate dehydratase activity /// 0016021 // integral to membrane 0.406 0.146 n y n ruditapes_c18204 -2.78 0.728 0.406 0.146 n y n ruditapes_c14884 -2.78 0.728 0.405 0.146 n y n ruditapes_c19033 ? 0.728 0 0.121 n y n ruditapes_c29326 ? 0.728 0 0.121 n y n ruditapes_c39653 ? 0.728 0 0.121 n y n ruditapes_c9625 ? 0.728 0 0.121 n y n ruditapes2_c466 -3.336 0.728 0.324 0.097 n y n ruditapes2_lrc6079 -3.706 0.728 ubiquinol-cytochrome c complex iii subunit vii 0.291 0.079 n y n ruditapes_lrc15901 -3.706 0.728 0.291 0.079 n y n ruditapes_c5369 -6.671 0.728 0.193 0.029 n y n ruditapes_c24773 -? 0.728 0.121 0 n y n ruditapes_c31131 -? 0.728 0.121 0 n y n ruditapes_c7799 -1.171 0.729 11.434 9.765 n n n ruditapes2_c429 1.173 0.729 7.99 9.373 n n n ruditapes_c28597 -1.218 0.729 7.279 5.976 n n n ruditapes_c1509 -1.225 0.729 stearoyl- desaturase /// 0044425 // membrane part /// 0016491 // oxidoreductase activity /// 0005783 // endoplasmic reticulum /// 0008610 // lipid biosynthetic process 6.903 5.634 n n n ruditapes2_c2688 1.269 0.729 3.559 4.514 n n n ruditapes_c22670 -1.315 0.729 3.863 2.938 n n n ruditapes_lrc38720 -1.334 0.729 3.5 2.623 n n n ruditapes_lrc36097 -1.378 0.729 2.865 2.079 n n n ruditapes_c2146 1.574 0.729 0.913 1.437 n y n ruditapes_c13452 1.591 0.729 mandelate racemase muconate lactonizing protein /// 0003824 // catalytic activity /// 0008152 // metabolic process 0.866 1.377 n y n ruditapes_lrc8487 -1.498 0.729 "PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]" 1.875 1.252 n n n ruditapes_c3047 -1.529 0.729 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 1.718 1.124 n y n ruditapes_lrc14087 -1.535 0.729 1.683 1.096 n y n ruditapes_s35432 -1.668 0.729 nadh dehydrogenase 1 beta 8kda 1.232 0.739 n y n ruditapes2_c447 -1.73 0.729 serine proteinase 1.087 0.628 n y n ruditapes_c23919 -1.819 0.729 0.935 0.514 n y n ruditapes_c23082 2.698 0.729 0.152 0.411 n y n ruditapes_c30802 2.998 0.729 phosphatidylserine phosphatidylglycerophosphate c ardiolipin synthases and related enzyme /// 0003824 // catalytic activity 0.119 0.357 n y n ruditapes_lrc39002 -2.224 0.729 gm2 activator protein 0.586 0.263 n y n ruditapes_lrc35911 4.497 0.729 0.054 0.242 n y n ruditapes_c8527 4.947 0.729 endoplasmic reticulum aminopeptidase 1 /// 0005488 // binding /// 0043229 // intracellular organelle 0.046 0.226 n y n ruditapes2_c2760 -2.669 0.729 ets homologous factor "/// 0045893 // positive regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0030855 // epithelial cell differentiation /// 0008283 // cell proliferation /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0005515 // protein binding" 0.427 0.16 n y n ruditapes_c9494 -2.78 0.729 0.401 0.144 n y n ruditapes_c5264 -2.965 0.729 pe-pgrs family protein 0.37 0.125 n y n ruditapes2_c1102 ? 0.729 0 0.12 n y n ruditapes2_c2461 ? 0.729 0 0.12 n y n ruditapes_c12739 ? 0.729 0 0.12 n y n ruditapes_c14192 ? 0.729 leucine rich repeat containing 1 0 0.12 n y n ruditapes_c14442 ? 0.729 0 0.12 n y n ruditapes_c17133 ? 0.729 0 0.12 n y n ruditapes_c29970 ? 0.729 0 0.12 n y n ruditapes_c30770 -3.336 0.729 0.32 0.096 n y n ruditapes2_c2313 -3.706 0.729 0.287 0.078 n y n ruditapes2_lrc6162 -4.448 0.729 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.246 0.055 n y n ruditapes_c23862 -? 0.729 0.12 0 n y n ruditapes_s39929 -? 0.729 0.12 0 n y n ruditapes2_lrc4437 -1.059 0.73 60s ribosomal protein l9 /// 0044446 // intracellular organelle part /// 0043231 // intracellular membrane-bounded organelle /// 0005840 // ribosome 94.424 89.129 n n n ruditapes_c15089 -1.135 0.73 17.78 15.668 n n n ruditapes_c1252 -1.157 0.73 13.273 11.473 n n n ruditapes_c8903 -1.164 0.73 12.166 10.45 n n n ruditapes_c19560 -1.182 0.73 10.025 8.48 n n n ruditapes2_c2935 1.246 0.73 nadh dehydrogenase /// 0005739 // mitochondrion 4.143 5.163 n n n ruditapes2_c2639 -1.311 0.73 3.912 2.983 n n n ruditapes_lrc16077 -1.334 0.73 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 3.486 2.613 n n n ruditapes2_c5635 -1.334 0.73 s- glutathione dehydrogenase class iii alcohol dehydrogenase "/// 0006113 // fermentation /// 0008270 // zinc ion binding /// 0004024 // alcohol dehydrogenase activity, zinc-dependent" 3.47 2.601 n n n ruditapes_c8945 1.427 0.73 1.526 2.178 n n n ruditapes_lrc29865 -1.395 0.73 2.656 1.904 n n n ruditapes_c30111 -1.415 0.73 2.463 1.74 n n n ruditapes_c7358 -1.415 0.73 limulus factor c precursor 2.448 1.73 n n n ruditapes_c2109 -1.609 0.73 unknown [Chrysomela tremulae] 1.392 0.865 n y n ruditapes2_c918 -1.617 0.73 dynein light chain lc8-type 2 /// 0005929 // cilium /// 0030286 // dynein complex /// 0019861 // flagellum /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 1.36 0.841 n y n ruditapes_c22122 -1.625 0.73 1.332 0.82 n y n ruditapes_c18305 -1.644 0.73 1.281 0.779 n y n ruditapes_c2213 -1.796 0.73 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0.963 0.536 n y n ruditapes_c8612 -1.882 0.73 0.845 0.449 n y n ruditapes_c27742 -2.038 0.73 0.695 0.341 n y n ruditapes_lrc32957 -2.224 0.73 0.581 0.261 n y n ruditapes2_c910 -2.224 0.73 0.579 0.26 n y n ruditapes_c1432 -2.224 0.73 0.577 0.26 n y n ruditapes_c36368 4.947 0.73 0.045 0.223 n y n ruditapes_c16170 ? 0.73 fbp32ii precursor 0 0.12 n y n ruditapes_c11903 ? 0.73 0 0.119 n y n ruditapes_c12021 ? 0.73 arrestin domain-containing 0 0.119 n y n ruditapes_c15177 ? 0.73 0 0.119 n y n ruditapes_c23036 ? 0.73 protein 0 0.119 n y n ruditapes_lrc30982 ? 0.73 0 0.119 n y n ruditapes_lrc33673 ? 0.73 0 0.119 n y n ruditapes_c28097 -3.336 0.73 0.319 0.096 n y n ruditapes_c9274 -6.671 0.73 0.19 0.029 n y n ruditapes2_c5929 -? 0.73 0.119 0 n y n ruditapes_c29479 -? 0.73 0.119 0 n y n ruditapes_c16414 -1.189 0.731 9.356 7.868 n n n ruditapes_c28529 1.222 0.731 4.991 6.098 n n n ruditapes_c8278 1.243 0.731 4.246 5.276 n n n ruditapes_c2031 -1.273 0.731 actin-related protein 2 3 complex subunit 3 /// 0005200 // structural constituent of cytoskeleton /// 0030027 // lamellipodium /// 0003779 // actin binding /// 0005885 // Arp2/3 protein complex /// 0005737 // cytoplasm /// 0030833 // regulation of actin filament polymerization /// 0006928 // cell motion 4.852 3.812 n n n ruditapes_c19358 -1.284 0.731 4.56 3.552 n n n ruditapes_c8407 1.373 0.731 1.938 2.66 n n n ruditapes_c12039 -1.359 0.731 3.084 2.269 n n n ruditapes_c31714 -1.402 0.731 2.566 1.83 n n n ruditapes_c9965 -1.55 0.731 1.598 1.031 n y n ruditapes_c14190 -1.668 0.731 1.211 0.726 n y n ruditapes_lrc19352 -1.701 0.731 1.136 0.668 n y n ruditapes2_c674 -1.747 0.731 anaphase promoting complex subunit 13 /// 0019941 // modification-dependent protein catabolic process /// 0051301 // cell division /// 0005634 // nucleus /// 0007067 // mitosis 1.042 0.596 n y n ruditapes_c17435 -1.906 0.731 0.815 0.427 n y n ruditapes_lrc36635 -2.022 0.731 angiopoietin-like 2 0.702 0.347 n y n ruditapes_c7720 3.148 0.731 0.106 0.333 n y n ruditapes_c21844 -2.053 0.731 0.68 0.331 n y n ruditapes_c10989 3.597 0.731 0.08 0.287 n y n ruditapes_c23159 3.597 0.731 0.08 0.287 n y n ruditapes_c26401 3.597 0.731 0.08 0.287 n y n ruditapes_c7587 3.597 0.731 0.08 0.287 n y n ruditapes_c9854 3.597 0.731 protein /// 0031224 // intrinsic to membrane /// 0005515 // protein binding /// 0004888 // transmembrane receptor activity /// 0007165 // signal transduction /// 0045087 // innate immune response 0.08 0.287 n y n ruditapes_c25118 -2.224 0.731 0.572 0.257 n y n ruditapes_lrc37114 -2.594 0.731 0.439 0.169 n y n ruditapes_c11786 ? 0.731 0 0.119 n y n ruditapes_c11095 ? 0.731 spi1_craviserine protease inhibitor cvsi-1 precursor 0 0.118 n y n ruditapes_c20693 ? 0.731 0 0.118 n y n ruditapes_c23057 ? 0.731 0 0.118 n y n ruditapes_c24153 ? 0.731 0 0.118 n y n ruditapes_c28480 ? 0.731 0 0.118 n y n ruditapes_c5827 ? 0.731 0 0.118 n y n ruditapes_c9841 ? 0.731 0 0.118 n y n ruditapes_c38557 -3.336 0.731 alkaline phosphatase /// 0016020 // membrane /// 0016787 // hydrolase activity 0.317 0.095 n y n ruditapes_s38213 -3.336 0.731 hypothetical protein BRAFLDRAFT_117811 [Branchiostoma floridae] 0.317 0.095 n y n ruditapes_c16547 -3.706 0.731 0.283 0.076 n y n ruditapes_lrc37864 -5.559 0.731 0.209 0.038 n y n ruditapes_c15596 -? 0.731 0.118 0 n y n ruditapes_c16191 -1.149 0.732 tis11-like protein /// 0003676 // nucleic acid binding /// 0016246 // RNA interference 14.463 12.588 n n n ruditapes2_c2056 -1.215 0.732 7.305 6.01 n n n ruditapes2_c2693 -1.23 0.732 nadh-ubiquinone oxidoreductase 42 kda subunit 6.478 5.266 n n n ruditapes_s39486 -1.274 0.732 4.813 3.779 n n n ruditapes_c13815 -1.279 0.732 4.642 3.631 n n n ruditapes2_c2025 -1.334 0.732 hypothetical protein BRAFLDRAFT_118007 [Branchiostoma floridae] 3.42 2.564 n n n ruditapes_c15454 -1.35 0.732 3.165 2.344 n n n ruditapes_lrc33089 1.42 0.732 protein /// 0016787 // hydrolase activity 1.554 2.206 n n n ruditapes2_c619 -1.385 0.732 aldo keto reductase 2.728 1.97 n n n ruditapes_c6574 -1.506 0.732 1.782 1.183 n y n ruditapes_c29580 -1.51 0.732 1.763 1.167 n y n ruditapes_c15121 1.709 0.732 0.617 1.054 n y n ruditapes2_lrc3732 -1.65 0.732 1.244 0.754 n y n ruditapes_c22024 1.991 0.732 lysozyme 2 /// 0016787 // hydrolase activity 0.35 0.697 n y n ruditapes_c14521 2.024 0.732 cg11638-pa isoform 1 0.332 0.672 n y n ruditapes2_c5048 2.136 0.732 bcl2-like 2 /// 0032502 // developmental process /// 0005737 // cytoplasm /// 0009987 // cellular process 0.281 0.601 n y n ruditapes_c28183 -1.747 0.732 1.029 0.589 n y n ruditapes_c21325 -1.882 0.732 0.835 0.444 n y n ruditapes2_c1685 -2.022 0.732 0.699 0.346 n y n ruditapes_c19375 3.597 0.732 0.08 0.286 n y n ruditapes_c30675 3.597 0.732 0.079 0.286 n y n ruditapes_lrc18342 -2.224 0.732 0.571 0.257 n y n ruditapes_lrc34770 -2.594 0.732 f-type h+-transporting atpase subunit f /// 0005811 // lipid particle 0.437 0.169 n y n ruditapes_c11592 -2.594 0.732 0.436 0.168 n y n ruditapes_c17549 -2.669 0.732 heat shock protein 22 isoform 2 0.418 0.156 n y n ruditapes2_lrc4444 ? 0.732 0 0.118 n y n ruditapes_c19718 ? 0.732 0 0.118 n y n ruditapes_c16336 ? 0.732 heat shock 70kda protein 12a 0 0.117 n y n ruditapes_c20362 ? 0.732 0 0.117 n y n ruditapes_c21591 ? 0.732 0 0.117 n y n ruditapes_c23117 ? 0.732 0 0.117 n y n ruditapes_c24032 ? 0.732 0 0.117 n y n ruditapes_c26670 ? 0.732 0 0.117 n y n ruditapes_c8937 ? 0.732 0 0.117 n y n ruditapes_c9907 ? 0.732 0 0.117 n y n ruditapes_lrc35048 ? 0.732 0 0.117 n y n ruditapes_c12372 -3.706 0.732 0.281 0.076 n y n ruditapes_c28354 -4.448 0.732 0.24 0.054 n y n ruditapes_c27611 -6.671 0.732 0.188 0.028 n y n ruditapes_c27788 -? 0.732 thymine dioxygenase 0.118 0 n y n ruditapes_c30821 -? 0.732 0.117 0 n y n ruditapes_c7969 -? 0.732 c1q and tumor necrosis factor related protein 4 0.117 0 n y n ruditapes_lrc35279 -? 0.732 0.117 0 n y n ruditapes2_c364 -1.086 0.733 42.272 38.921 n n n ruditapes2_c509 -1.118 0.733 22.336 19.975 n n n ruditapes2_c530 1.11 0.733 17.994 19.968 n n n ruditapes_c17296 -1.17 0.733 11.176 9.551 n n n ruditapes2_c1472 1.237 0.733 4.364 5.396 n n n ruditapes2_c1536 1.312 0.733 cg10914 cg10914-pa 2.63 3.449 n n n ruditapes_c18016 1.349 0.733 2.148 2.898 n n n ruditapes_c232 -1.375 0.733 2.816 2.049 n n n ruditapes_lrc22961 -1.407 0.733 2.477 1.761 n n n ruditapes_c30158 1.513 0.733 1.082 1.636 n y n ruditapes_c27440 1.559 0.733 zgc:174637 protein 0.923 1.439 n y n ruditapes_c37221 1.686 0.733 lysozyme 2 "/// 0016798 // hydrolase activity, acting on glycosyl bonds" 0.646 1.09 n y n ruditapes_lrc16993 -1.575 0.733 1.465 0.93 n y n ruditapes_c2838 -1.606 0.733 1.362 0.848 n y n ruditapes_c16121 -1.617 0.733 1.328 0.821 n y n ruditapes_lrc34086 2.099 0.733 ribosomal protein l11 0.293 0.616 n y n ruditapes_c9495 -1.779 0.733 large neutral amino acids /// 0006810 // transport /// 0016020 // membrane 0.973 0.547 n y n ruditapes_c10516 -1.779 0.733 sjchgc02063 protein 0.968 0.544 n y n ruditapes2_c817 -2.001 0.733 0.707 0.353 n y n ruditapes_c1410 3.597 0.733 0.079 0.284 n y n ruditapes_c4788 3.597 0.733 0.079 0.284 n y n ruditapes2_c1028 -2.224 0.733 0.567 0.255 n y n ruditapes_c15813 -2.224 0.733 atp-binding sub-family g member 5 /// 0046982 // protein heterodimerization activity /// 0044464 // cell part 0.567 0.255 n y n ruditapes_c21893 -2.224 0.733 0.564 0.254 n y n ruditapes_c9317 -2.78 0.733 putative uromodulin [Mytilus galloprovincialis] 0.391 0.141 n y n ruditapes2_lrc5218 -2.78 0.733 hypothetical protein [Macrobrachium rosenbergii] 0.39 0.14 n y n ruditapes_c7043 -2.965 0.733 0.357 0.12 n y n ruditapes_c20144 ? 0.733 0 0.117 n y n ruditapes_c30616 ? 0.733 0 0.117 n y n ruditapes_lrc35147 ? 0.733 epdr1 protein 0 0.117 n y n ruditapes2_c2210 ? 0.733 17-beta-hydroxysteroid dehydrogenase 14 /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0 0.116 n y n ruditapes_c15733 ? 0.733 myosin xv /// 0005524 // ATP binding /// 0003774 // motor activity /// 0016459 // myosin complex 0 0.116 n y n ruditapes_c18822 ? 0.733 0 0.116 n y n ruditapes_c23011 ? 0.733 0 0.116 n y n ruditapes_c25038 ? 0.733 0 0.116 n y n ruditapes_c31298 ? 0.733 0 0.116 n y n ruditapes_c31517 ? 0.733 0 0.116 n y n ruditapes2_lrc4590 -4.448 0.733 predicted protein [Nematostella vectensis] 0.24 0.054 n y n ruditapes_lrc11246 -5.559 0.733 0.205 0.037 n y n ruditapes_c31888 -8.895 0.733 0.165 0.019 n y n ruditapes_c20502 -? 0.733 0.117 0 n y n ruditapes_c34325 -? 0.733 thioredoxin domain containing 9 /// 0045454 // cell redox homeostasis 0.116 0 n y n ruditapes_lrc35655 -1.096 0.734 60s acidic ribosomal protein p1 /// 0044444 // cytoplasmic part 33.661 30.716 n n n ruditapes_c14819 1.12 0.734 15.038 16.846 n n n ruditapes_c29916 1.168 0.734 8.169 9.541 n n n ruditapes_c9898 -1.214 0.734 7.247 5.967 n n n ruditapes_c24222 1.394 0.734 1.708 2.381 n n n ruditapes_c5589 1.453 0.734 1.329 1.932 n n n ruditapes_c7143 -1.483 0.734 1.889 1.274 n n n ruditapes_c31504 -1.61 0.734 1.34 0.832 n y n ruditapes_c24462 1.949 0.734 0.372 0.726 n y n ruditapes_s39342 -1.747 0.734 1.019 0.583 n y n ruditapes_c30100 -1.756 0.734 1.004 0.572 n y n ruditapes_c26402 -1.779 0.734 0.959 0.539 n y n ruditapes_s33728 -1.906 0.734 0.796 0.418 n y n ruditapes_c24396 -2.022 0.734 0.689 0.341 n y n ruditapes2_c966 3.148 0.734 mitogen-activated protein-binding protein-interacting protein /// 0044446 // intracellular organelle part /// 0005515 // protein binding /// 0031090 // organelle membrane /// 0005764 // lysosome /// 0000186 // activation of MAPKK activity /// 0005770 // late endosome 0.103 0.325 n y n ruditapes_lrc35660 3.597 0.734 osteoblast specific factor 0.078 0.28 n y n ruditapes_c24864 -2.224 0.734 0.562 0.253 n y n ruditapes_c12654 -2.224 0.734 0.56 0.252 n y n ruditapes_lrc34819 -2.965 0.734 ferritin /// 0006826 // iron ion transport /// 0016491 // oxidoreductase activity /// 0006879 // cellular iron ion homeostasis /// 0008199 // ferric iron binding 0.355 0.12 n y n ruditapes_c15823 ? 0.734 arp6 actin-related protein 6 homolog 0 0.116 n y n ruditapes_lrc31753 ? 0.734 0 0.116 n y n ruditapes2_c385 ? 0.734 c1q and tumor necrosis factor related protein 3 isoform 2 0 0.115 n y n ruditapes2_c4572 ? 0.734 developmentally-regulated vdg3 0 0.115 n y n ruditapes2_lrc5300 ? 0.734 calponin homolog /// 0005515 // protein binding 0 0.115 n y n ruditapes_c14859 ? 0.734 cathepsin l /// 0008234 // cysteine-type peptidase activity /// 0005515 // protein binding 0 0.115 n y n ruditapes_c29034 ? 0.734 0 0.115 n y n ruditapes_lrc32128 ? 0.734 inhibitor of apoptosis protein 0 0.115 n y n ruditapes_lrc40206 ? 0.734 0 0.115 n y n ruditapes_s39276 ? 0.734 enhancer of rudimentary homolog /// 0007049 // cell cycle /// 0006221 // pyrimidine nucleotide biosynthetic process /// 0006207 // 'de novo' pyrimidine base biosynthetic process 0 0.115 n y n ruditapes_lrc15452 -3.336 0.734 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 0.309 0.093 n y n ruditapes_c9245 -3.336 0.734 0.308 0.092 n y n ruditapes2_lrc4232 -3.706 0.734 0.276 0.075 n y n ruditapes_c12522 -4.448 0.734 0.236 0.053 n y n ruditapes2_c6828 -6.671 0.734 mannose c type 2 0.184 0.028 n y n ruditapes_c8457 -6.671 0.734 perlucin-like protein isoform b 0.184 0.028 n y n ruditapes_lrc38783 -? 0.734 0.116 0 n y n ruditapes_c26678 -? 0.734 0.115 0 n y n ruditapes_c19805 1.122 0.735 14.595 16.373 n n n ruditapes_c22358 1.17 0.735 7.886 9.23 n n n ruditapes_c28169 -1.189 0.735 9.078 7.637 n n n ruditapes_c26364 1.205 0.735 5.574 6.718 n n n ruditapes_c4940 -1.213 0.735 myosin heavy chain /// 0005524 // ATP binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0003779 // actin binding /// 0005863 // striated muscle thick filament 7.3 6.019 n n n ruditapes_c2982 -1.234 0.735 6.175 5.006 n n n ruditapes_c16712 -1.245 0.735 5.659 4.544 n n n ruditapes_c3647 -1.256 0.735 5.245 4.176 n n n ruditapes2_c1966 -1.32 0.735 3.608 2.734 n n n ruditapes_c16563 -1.334 0.735 3.359 2.518 n n n ruditapes_c16879 -1.351 0.735 3.093 2.289 n n n ruditapes_c11578 1.413 0.735 1.558 2.202 n n n ruditapes_c30087 -1.38 0.735 2.707 1.961 n n n ruditapes_c18083 1.461 0.735 1.284 1.876 n n n ruditapes_lrc12879 1.553 0.735 glutaminyl-trna synthetase /// 0005488 // binding 0.928 1.442 n y n ruditapes_c29091 1.559 0.735 scavenger receptor cysteine-rich protein type 12 precursor /// 0009987 // cellular process 0.909 1.417 n y n ruditapes_c14477 1.599 0.735 0.805 1.286 n y n ruditapes_c27414 1.67 0.735 0.664 1.11 n y n ruditapes_c2370 1.699 0.735 fibropellin ib 0.617 1.049 n y n ruditapes2_c2595 1.855 0.735 0.44 0.815 n y n ruditapes_c28222 -1.668 0.735 1.168 0.7 n y n ruditapes2_lrc3678 1.991 0.735 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 0.343 0.684 n y n ruditapes2_c6529 -1.69 0.735 zygote arrest 1 1.124 0.665 n y n ruditapes_lrc38295 2.024 0.735 0.324 0.655 n y n ruditapes_c14096 -1.718 0.735 1.064 0.619 n y n ruditapes_c16228 2.248 0.735 0.235 0.527 n y n ruditapes2_c104 -1.831 0.735 musashi homolog 2 /// 0008266 // poly(U) RNA binding /// 0005844 // polysome /// 0005737 // cytoplasm 0.879 0.48 n y n ruditapes_c7632 2.548 0.735 0.168 0.427 n y n ruditapes2_c182 -1.946 0.735 0.75 0.385 n y n ruditapes_lrc33514 2.923 0.735 ependymin precursor 0.12 0.351 n y n ruditapes_lrc35697 -2.541 0.735 0.44 0.173 n y n ruditapes_c10510 ? 0.735 hypothetical protein BRAFLDRAFT_103567 [Branchiostoma floridae] 0 0.115 n y n ruditapes_c15134 ? 0.735 0 0.115 n y n ruditapes_lrc37914 ? 0.735 glutathione s-transferase /// 0005515 // protein binding 0 0.115 n y n ruditapes_s39919 ? 0.735 0 0.115 n y n ruditapes2_c6721 ? 0.735 0 0.114 n y n ruditapes_c10787 ? 0.735 0 0.114 n y n ruditapes_c12418 ? 0.735 ankyrin unc44 0 0.114 n y n ruditapes_c18415 ? 0.735 0 0.114 n y n ruditapes_c30816 ? 0.735 0 0.114 n y n ruditapes_lrc21919 ? 0.735 0 0.114 n y n ruditapes_c29078 -4.448 0.735 baculoviral iap repeat-containing 6 0.235 0.053 n y n ruditapes_c8600 -4.448 0.735 0.235 0.053 n y n ruditapes_lrc18963 -4.448 0.735 nadh dehydrogenase 0.235 0.053 n y n ruditapes_c1458 -? 0.735 0.114 0 n y n ruditapes_c24150 -? 0.735 0.114 0 n y n ruditapes_lrc26717 -? 0.735 0.114 0 n y n ruditapes_c31142 -1.14 0.736 15.653 13.726 n n n ruditapes_c17621 -1.152 0.736 13.535 11.754 n n n ruditapes_c21260 -1.268 0.736 4.822 3.803 n n n ruditapes_c4345 1.323 0.736 2.415 3.194 n n n ruditapes_c21539 -1.302 0.736 3.95 3.035 n n n ruditapes2_c1165 -1.347 0.736 3.129 2.323 n n n ruditapes2_c1769 1.499 0.736 septin 2 /// 0000166 // nucleotide binding /// 0005737 // cytoplasm /// 0007049 // cell cycle /// 0044430 // cytoskeletal part 1.101 1.65 n n n ruditapes_c21928 -1.534 0.736 1.601 1.044 n y n ruditapes2_lrc5487 1.709 0.736 nadh dehydrogenase 1 beta subcomplex 3 /// 0016491 // oxidoreductase activity 0.598 1.022 n y n ruditapes_c753 -1.54 0.736 1.569 1.019 n y n ruditapes_c10591 -1.551 0.736 phospholipase group iva ( calcium-dependent) /// 0030501 // positive regulation of bone mineralization /// 0043129 // surfactant homeostasis /// 0042588 // zymogen granule /// 0048471 // perinuclear region of cytoplasm /// 0031622 // positive regulation of fever /// 0031394 // positive regulation of prostaglandin biosynthetic process /// 0005624 // membrane fraction /// 0010226 // response to lithium ion /// 0008284 // positive regulation of cell proliferation /// 0005634 // nucleus /// 0001554 // luteolysis /// 0043065 // positive regulation of apoptosis /// 0051384 // response to glucocorticoid stimulus /// 0032496 // response to lipopolysaccharide /// 0047498 // calcium-dependent phospholipase A2 activity /// 0007568 // aging /// 0046697 // decidualization /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0009408 // response to heat /// 0033280 // response to vitamin D /// 0042542 // response to hydrogen peroxide /// 0005509 // calcium ion binding /// 0051597 // response to methylmercury /// 0004622 // lysophospholipase activity /// 0009395 // phospholipid catabolic process /// 0019369 // arachidonic acid metabolic process /// 0010243 // response to organic nitrogen /// 0031340 // positive regulation of vesicle fusion 1.53 0.986 n y n ruditapes_c3364 1.735 0.736 c1q and tumor necrosis factor related protein 3 isoform 2 0.565 0.979 n y n ruditapes_c9838 -1.561 0.736 commd1 protein /// 0042802 // identical protein binding 1.484 0.95 n y n ruditapes_c34357 -1.617 0.736 vitelline membrane outer layer protein 1 homolog precursor 1.303 0.806 n y n ruditapes_lrc32134 -1.654 0.736 glutathione s-transferase 1.202 0.727 n y n ruditapes2_lrc5911 -1.74 0.736 agrin precursor 1.014 0.582 n y n ruditapes_c29823 -1.779 0.736 rab5 protein 0.947 0.532 n y n ruditapes_c11000 -1.819 0.736 0.89 0.489 n y n ruditapes_c14984 2.698 0.736 0.144 0.389 n y n ruditapes2_lrc3154 -2.065 0.736 serum amyloid a /// 0005576 // extracellular region 0.646 0.313 n y n ruditapes_lrc20425 -2.224 0.736 0.555 0.249 n y n ruditapes_c16915 -2.224 0.736 0.554 0.249 n y n ruditapes_lrc13832 4.047 0.736 0.061 0.248 n y n ruditapes_lrc13927 4.497 0.736 0.051 0.228 n y n ruditapes2_lrc3935 -2.669 0.736 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0.404 0.152 n y n ruditapes_c13846 -2.78 0.736 0.382 0.137 n y n ruditapes_c23508 -2.78 0.736 0.381 0.137 n y n ruditapes_c31116 -2.78 0.736 0.38 0.137 n y n ruditapes_c12707 ? 0.736 0 0.114 n y n ruditapes_c18559 ? 0.736 0 0.114 n y n ruditapes_c20218 ? 0.736 0 0.114 n y n ruditapes_c23060 ? 0.736 0 0.114 n y n ruditapes_c23909 ? 0.736 0 0.114 n y n ruditapes_c430 ? 0.736 protein 0 0.114 n y n ruditapes_s35898 ? 0.736 0 0.114 n y n ruditapes_c18311 ? 0.736 keratin associated protein 10-7 /// 0009987 // cellular process 0 0.113 n y n ruditapes_c20119 ? 0.736 0 0.113 n y n ruditapes_c23984 ? 0.736 0 0.113 n y n ruditapes_c15848 -3.336 0.736 0.304 0.091 n y n ruditapes_c23066 -3.336 0.736 0.304 0.091 n y n ruditapes_c29111 -4.448 0.736 0.234 0.053 n y n ruditapes_c24610 -? 0.736 0.113 0 n y n ruditapes_c11839 -1.128 0.737 18.458 16.356 n n n ruditapes2_c1334 -1.177 0.737 hepatopancreas kazal-type proteinase inhibitor 10.056 8.546 n n n ruditapes_c27359 1.27 0.737 3.335 4.234 n n n ruditapes_lrc27500 -1.39 0.737 2.565 1.846 n n n ruditapes_c26668 1.619 0.737 0.752 1.217 n y n ruditapes_c20409 1.686 0.737 0.626 1.056 n y n ruditapes_c1742 -1.57 0.737 1.438 0.916 n y n ruditapes_c17455 -1.575 0.737 presenilin 2 /// 0007059 // chromosome segregation /// 0007242 // intracellular signaling cascade /// 0005789 // endoplasmic reticulum membrane /// 0000776 // kinetochore /// 0005515 // protein binding /// 0043085 // positive regulation of catalytic activity /// 0042987 // amyloid precursor protein catabolic process /// 0007220 // Notch receptor processing /// 0008233 // peptidase activity /// 0006509 // membrane protein ectodomain proteolysis /// 0005887 // integral to plasma membrane /// 0000139 // Golgi membrane /// 0005639 // integral to nuclear inner membrane /// 0016485 // protein processing /// 0008219 // cell death 1.427 0.906 n y n ruditapes_c11534 -1.668 0.737 origin recognition complex subunit 3 protein 1.153 0.691 n y n ruditapes_c5911 2.136 0.737 0.269 0.575 n y n ruditapes_lrc35638 2.158 0.737 astacin-like squid metalloprotease type iii /// 0003824 // catalytic activity 0.261 0.563 n y n ruditapes_c7353 -1.756 0.737 hypothetical protein BRAFLDRAFT_97410 [Branchiostoma floridae] 0.978 0.557 n y n ruditapes_lrc9000 -1.779 0.737 0.937 0.527 n y n ruditapes_c19236 3.597 0.737 0.076 0.274 n y n ruditapes_s39671 -2.224 0.737 0.55 0.247 n y n ruditapes_c13536 4.047 0.737 conserved hypothetical protein [Ixodes scapularis] 0.061 0.247 n y n ruditapes_c24485 -2.224 0.737 0.547 0.246 n y n ruditapes_c29870 -2.224 0.737 0.547 0.246 n y n ruditapes_lrc15608 -2.541 0.737 0.432 0.17 n y n ruditapes_c8343 -2.594 0.737 0.418 0.161 n y n ruditapes_c11920 ? 0.737 0 0.113 n y n ruditapes_c21992 ? 0.737 0 0.113 n y n ruditapes_c26297 ? 0.737 0 0.113 n y n ruditapes_c20670 ? 0.737 0 0.112 n y n ruditapes_c24538 ? 0.737 0 0.112 n y n ruditapes_c8391 ? 0.737 0 0.112 n y n ruditapes_c9082 ? 0.737 sidekick homolog 2 0 0.112 n y n ruditapes_lrc33603 -4.448 0.737 plasma kallikrein precursor (plasma prekallikrein) (fletcher factor) 0.231 0.052 n y n ruditapes_c11358 -? 0.737 0.113 0 n y n ruditapes_c23014 -? 0.737 0.113 0 n y n ruditapes_c7610 -? 0.737 0.113 0 n y n ruditapes_s37474 -? 0.737 0.113 0 n y n ruditapes_c31444 1.047 0.738 77.884 81.574 n n n ruditapes_c1038 1.082 0.738 29.477 31.895 n n n ruditapes_c4043 -1.14 0.738 15.421 13.522 n n n ruditapes2_c1137 -1.18 0.738 9.636 8.166 n n n ruditapes_c15133 1.185 0.738 death associated protein 3 /// 0044446 // intracellular organelle part /// 0008624 // induction of apoptosis by extracellular signals /// 0005739 // mitochondrion /// 0016020 // membrane /// 0005515 // protein binding /// 0005840 // ribosome 6.61 7.833 n n n ruditapes_c10521 1.202 0.738 5.646 6.784 n n n ruditapes_c35669 -1.263 0.738 4.904 3.884 n n n ruditapes_c17135 -1.319 0.738 3.532 2.678 n n n ruditapes_lrc14800 1.369 0.738 1.869 2.558 n n n ruditapes_c2888 -1.334 0.738 3.269 2.45 n n n ruditapes_c13713 -1.361 0.738 2.885 2.12 n n n ruditapes_c8914 -1.39 0.738 fch domain only 2 2.54 1.827 n n n ruditapes_c10972 -1.395 0.738 2.494 1.788 n n n ruditapes_c14653 -1.483 0.738 1.826 1.232 n n n ruditapes_c23326 -1.483 0.738 1.823 1.229 n n n ruditapes_lrc19565 1.619 0.738 0.746 1.208 n y n ruditapes_c15918 -1.499 0.738 1.748 1.167 n n n ruditapes_c11765 -1.499 0.738 1.738 1.16 n n n ruditapes_c27795 1.758 0.738 0.525 0.922 n y n ruditapes_c22089 1.863 0.738 0.423 0.788 n y n ruditapes_c20980 -1.668 0.738 1.145 0.686 n y n ruditapes_c17384 -1.701 0.738 1.077 0.633 n y n ruditapes_c13821 -1.747 0.738 0.983 0.563 n y n ruditapes_c22284 -1.779 0.738 0.935 0.526 n y n ruditapes_c4593 2.248 0.738 0.23 0.516 n y n ruditapes_s38433 2.473 0.738 0.177 0.437 n y n ruditapes_c28571 -2.224 0.738 0.546 0.245 n y n ruditapes_lrc39498 -2.224 0.738 0.542 0.244 n y n ruditapes_c27811 4.047 0.738 hypothetical protein CHLREDRAFT_193324 [Chlamydomonas reinhardtii] 0.06 0.244 n y n ruditapes_s36699 -2.965 0.738 0.344 0.116 n y n ruditapes2_c1625 ? 0.738 fibronectin-binding protein /// 0044464 // cell part 0 0.112 n y n ruditapes2_c6671 ? 0.738 hemagglutinin amebocyte aggregation factor precursor 0 0.112 n y n ruditapes_c15062 ? 0.738 0 0.112 n y n ruditapes_c24493 ? 0.738 0 0.112 n y n ruditapes_c4537 ? 0.738 methyltransferase type 11 0 0.112 n y n ruditapes_c5439 ? 0.738 PREDICTED: similar to conserved hypothetical protein [Nasonia vitripennis] 0 0.112 n y n ruditapes_c6154 ? 0.738 zona pellucida c 0 0.112 n y n ruditapes_lrc18866 ? 0.738 0 0.112 n y n ruditapes_s33680 ? 0.738 0 0.112 n y n ruditapes_lrc28965 -3.706 0.738 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 0.269 0.072 n y n ruditapes_c15329 -4.448 0.738 0.23 0.052 n y n ruditapes_c17482 -? 0.738 0.112 0 n y n ruditapes_c5433 -? 0.738 0.112 0 n y n ruditapes_c6623 -? 0.738 0.112 0 n y n ruditapes_lrc35156 -? 0.738 0.112 0 n y n ruditapes_c25453 -? 0.738 0.111 0 n y n ruditapes_c28943 -? 0.738 0.111 0 n y n ruditapes_lrc14622 1.103 0.739 19.334 21.322 n n n ruditapes_c1395 1.122 0.739 14.198 15.923 n n n ruditapes_c13351 -1.156 0.739 12.481 10.796 n n n ruditapes_c28655 -1.164 0.739 11.424 9.815 n n n ruditapes_c30289 -1.253 0.739 f-box and leucine-rich repeat protein 13 5.218 4.165 n n n ruditapes2_c1611 -1.328 0.739 bud31 homolog /// 0007275 // multicellular organismal development /// 0005634 // nucleus /// 0008270 // zinc ion binding 3.347 2.52 n n n ruditapes_c22088 1.487 0.739 1.12 1.666 n n n ruditapes_c3216 -1.456 0.739 1.981 1.36 n n n ruditapes_lrc8736 -1.464 0.739 1.918 1.309 n n n ruditapes_c2860 -1.483 0.739 1.808 1.22 n n n ruditapes_c12873 -1.509 0.739 coiled-coil-helix-coiled-coil-helix domain containing 7 1.679 1.113 n y n ruditapes_c11574 1.799 0.739 c8orf41 protein 0.476 0.856 n y n ruditapes_c1882 2.248 0.739 0.227 0.511 n y n ruditapes_lrc18885 2.248 0.739 dynein light chain 2 /// 0030286 // dynein complex /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0005829 // cytosol /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 0.227 0.511 n y n ruditapes_c29862 -1.853 0.739 0.827 0.446 n y n ruditapes_c35600 -1.853 0.739 thyroid hormone receptor interactor 3 /// 0005488 // binding 0.823 0.444 n y n ruditapes2_c617 2.923 0.739 0.116 0.34 n y n ruditapes_c17610 -2.001 0.739 0.675 0.337 n y n ruditapes2_lrc2766 3.597 0.739 0.075 0.271 n y n ruditapes_c30047 -2.224 0.739 0.539 0.242 n y n ruditapes_c9512 -2.78 0.739 0.374 0.134 n y n ruditapes2_lrc6934 ? 0.739 ubiquinol-cytochrome c complex iii subunit vii 0 0.111 n y n ruditapes_c22155 ? 0.739 0 0.111 n y n ruditapes_c27468 ? 0.739 0 0.111 n y n ruditapes_s40258 ? 0.739 0 0.111 n y n ruditapes2_lrc3403 -4.448 0.739 0.229 0.051 n y n ruditapes_lrc24225 -? 0.739 0.111 0 n y n ruditapes_c4466 -1.177 0.74 9.769 8.297 n n n ruditapes_c29478 -1.24 0.74 5.646 4.552 n n n ruditapes_c8169 -1.31 0.74 transposase 3.64 2.779 n n n ruditapes_c10796 1.424 0.74 1.432 2.039 n n n ruditapes2_c5061 1.449 0.74 beta-ig-h3 fasciclin 1.288 1.866 n n n ruditapes_c6927 1.505 0.74 1.05 1.581 n y n ruditapes2_c1936 -1.529 0.74 1.565 1.024 n y n ruditapes_c10469 -1.55 0.74 lin-7 homolog c /// 0019717 // synaptosome /// 0006886 // intracellular protein transport /// 0045211 // postsynaptic membrane /// 0007269 // neurotransmitter secretion /// 0016323 // basolateral plasma membrane /// 0007043 // cell-cell junction assembly /// 0030165 // PDZ domain binding /// 0005923 // tight junction /// 0006887 // exocytosis 1.482 0.956 n y n ruditapes_lrc18354 -1.565 0.74 1.432 0.915 n y n ruditapes_c31637 -1.831 0.74 0.843 0.46 n y n ruditapes2_c2039 -1.921 0.74 0.741 0.386 n y n ruditapes_lrc35762 -2.594 0.74 ependymin related protein-1 0.408 0.157 n y n ruditapes_lrc15772 ? 0.74 0 0.111 n y n ruditapes_c16195 ? 0.74 0 0.11 n y n ruditapes_c17940 ? 0.74 adp-ribosylation factor-like 15 0 0.11 n y n ruditapes_c17960 ? 0.74 0 0.11 n y n ruditapes_c18046 ? 0.74 hat dimerisation 0 0.11 n y n ruditapes_c21252 ? 0.74 0 0.11 n y n ruditapes_c24129 ? 0.74 0 0.11 n y n ruditapes_c25278 ? 0.74 0 0.11 n y n ruditapes_c28185 ? 0.74 0 0.11 n y n ruditapes_c31491 ? 0.74 0 0.11 n y n ruditapes_c7264 ? 0.74 0 0.11 n y n ruditapes_c7380 ? 0.74 chitinase 0 0.11 n y n ruditapes_lrc39445 ? 0.74 0 0.11 n y n ruditapes_s35224 ? 0.74 beta- precursor 0 0.11 n y n ruditapes_s40281 -4.448 0.74 0.226 0.051 n y n ruditapes2_c756 -? 0.74 non-smc element mms21 homolog 0.111 0 n y n ruditapes2_c74 -1.108 0.741 25.116 22.668 n n n ruditapes2_c2264 -1.155 0.741 transcriptional adaptor 2 /// 0044238 // primary metabolic process /// 0005488 // binding /// 0034960 // cellular biopolymer metabolic process 12.401 10.733 n n n ruditapes_c25347 -1.184 0.741 9.061 7.656 n n n ruditapes_c9632 -1.189 0.741 ras-like gene family member a /// 0007266 // Rho protein signal transduction /// 0005856 // cytoskeleton /// 0007160 // cell-matrix adhesion /// 0005634 // nucleus /// 0030154 // cell differentiation /// 0005886 // plasma membrane /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043149 // stress fiber formation /// 0004871 // signal transducer activity /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005737 // cytoplasm /// 0000287 // magnesium ion binding /// 0043524 // negative regulation of neuron apoptosis /// 0000902 // cell morphogenesis /// 0042346 // positive regulation of NF-kappaB import into nucleus /// 0007519 // skeletal muscle tissue development 8.611 7.24 n n n ruditapes_c13411 -1.334 0.741 3.204 2.401 n n n ruditapes_c25356 -1.415 0.741 2.251 1.591 n n n ruditapes_c9939 1.529 0.741 0.959 1.466 n y n ruditapes_c9138 1.606 0.741 brain chitinase and chia 0.756 1.214 n y n ruditapes2_c1118 1.63 0.741 riken cdna isoform cra_a 0.704 1.148 n y n ruditapes_c20711 -1.544 0.741 1.493 0.967 n y n ruditapes_c22977 -1.601 0.741 mgc107931 protein 1.293 0.807 n y n ruditapes2_c1810 1.849 0.741 wd repeat domain 92 /// 0005524 // ATP binding /// 0006915 // apoptosis /// 0005737 // cytoplasm /// 0004812 // aminoacyl-tRNA ligase activity /// 0006418 // tRNA aminoacylation for protein translation 0.422 0.781 n y n ruditapes_c5384 -1.711 0.741 1.028 0.601 n y n ruditapes_c9647 -1.779 0.741 bet1 homolog 0.908 0.51 n y n ruditapes_c7307 -1.837 0.741 0.83 0.452 n y n ruditapes2_lrc3247 2.548 0.741 serine proteinase 0.16 0.408 n y n ruditapes_c5284 -1.946 0.741 0.714 0.367 n y n ruditapes_c29162 -2.053 0.741 0.627 0.305 n y n ruditapes_c18208 -2.224 0.741 0.533 0.24 n y n ruditapes_c55 -2.224 0.741 0.533 0.24 n y n ruditapes_c8482 -2.224 0.741 isoform c /// 0043229 // intracellular organelle 0.533 0.24 n y n ruditapes_c14597 -2.965 0.741 0.337 0.114 n y n ruditapes_c9740 -2.965 0.741 0.337 0.114 n y n ruditapes2_c2882 ? 0.741 hypothetical protein BRAFLDRAFT_84721 [Branchiostoma floridae] 0 0.109 n y n ruditapes_c17472 ? 0.741 0 0.109 n y n ruditapes_c19267 ? 0.741 0 0.109 n y n ruditapes_c22166 ? 0.741 0 0.109 n y n ruditapes_c28874 ? 0.741 0 0.109 n y n ruditapes_c6089 ? 0.741 cytochrome c oxidase subunit mitochondrial 0 0.109 n y n ruditapes_lrc38654 ? 0.741 0 0.109 n y n ruditapes2_c851 -3.336 0.741 perlucin 8 0.293 0.088 n y n ruditapes_c11355 -3.336 0.741 0.291 0.087 n y n ruditapes_c23824 -3.336 0.741 0.291 0.087 n y n ruditapes_c17272 -4.448 0.741 0.224 0.05 n y n ruditapes_c28289 -4.448 0.741 0.224 0.05 n y n ruditapes_c27410 -? 0.741 0.11 0 n y n ruditapes_c16065 -? 0.741 0.109 0 n y n ruditapes_c16986 -? 0.741 0.109 0 n y n ruditapes_c29378 -? 0.741 0.109 0 n y n ruditapes2_c2918 1.115 0.742 15.418 17.187 n n n ruditapes_c10588 -1.166 0.742 10.885 9.337 n n n ruditapes2_c4021 1.176 0.742 7.007 8.243 n n n ruditapes_c16082 -1.204 0.742 7.443 6.184 n n n ruditapes_c21955 -1.206 0.742 7.295 6.05 n n n ruditapes2_c547 -1.295 0.742 calmodulin 2 /// 0005509 // calcium ion binding 3.893 3.006 n n n ruditapes_c30895 -1.32 0.742 3.417 2.59 n n n ruditapes_c17854 1.392 0.742 1.62 2.255 n n n ruditapes_c21488 1.433 0.742 1.352 1.937 n n n ruditapes_c10210 1.499 0.742 1.057 1.585 n n n ruditapes_c7490 -1.456 0.742 1.928 1.325 n n n ruditapes_c28235 1.574 0.742 0.823 1.296 n y n ruditapes2_c1585 -1.516 0.742 hemagglutinin amebocyte aggregation factor precursor 1.596 1.052 n y n ruditapes_c31164 1.724 0.742 0.549 0.947 n y n ruditapes_c3777 -1.617 0.742 cq098_human ame: full=uncharacterized protein c17orf98 1.237 0.765 n y n ruditapes2_lrc3163 -1.668 0.742 1.106 0.663 n y n ruditapes_c13403 2.024 0.742 0.307 0.621 n y n ruditapes_s38653 -1.853 0.742 galactoside- 3 0.802 0.433 n y n ruditapes_c15085 -2.038 0.742 0.635 0.312 n y n ruditapes_c14750 -2.224 0.742 0.528 0.237 n y n ruditapes_c6973 -2.224 0.742 copine viii 0.526 0.237 n y n ruditapes_c6556 4.497 0.742 0.048 0.217 n y n ruditapes2_c338 -2.965 0.742 PREDICTED: similar to GA21374-PA [Strongylocentrotus purpuratus] 0.333 0.112 n y n ruditapes_c29148 ? 0.742 complement component c3 0 0.109 n y n ruditapes_c37616 ? 0.742 hypothetical protein BRAFLDRAFT_74660 [Branchiostoma floridae] 0 0.109 n y n ruditapes_c17489 ? 0.742 solute carrier family 5 (sodium glucose cotransporter) member 1 /// 0016324 // apical plasma membrane /// 0006814 // sodium ion transport /// 0031402 // sodium ion binding /// 0001656 // metanephros development /// 0005412 // glucose:sodium symporter activity /// 0005515 // protein binding /// 0005903 // brush border /// 0005887 // integral to plasma membrane /// 0015758 // glucose transport /// 0050892 // intestinal absorption 0 0.108 n y n ruditapes_c18551 ? 0.742 0 0.108 n y n ruditapes_c19222 ? 0.742 0 0.108 n y n ruditapes_c28815 ? 0.742 cathepsin c 0 0.108 n y n ruditapes_c28848 ? 0.742 0 0.108 n y n ruditapes_c29581 ? 0.742 0 0.108 n y n ruditapes_c30788 ? 0.742 0 0.108 n y n ruditapes_c5744 ? 0.742 0 0.108 n y n ruditapes_c7772 ? 0.742 0 0.108 n y n ruditapes_c9619 ? 0.742 0 0.108 n y n ruditapes_lrc32706 ? 0.742 ca2+ sensor 0 0.108 n y n ruditapes_c5805 -3.336 0.742 0.29 0.087 n y n ruditapes_c30367 -3.336 0.742 0.289 0.087 n y n ruditapes_c15244 -? 0.742 0.109 0 n y n ruditapes2_lrc3362 -? 0.742 0.108 0 n y n ruditapes_c22142 -? 0.742 protein 0.108 0 n y n ruditapes_s38696 -? 0.742 0.108 0 n y n ruditapes_lrc10088 -1.123 0.743 mitochondrial atp synthase lipid binding protein precursor "/// 0015992 // proton transport /// 0015078 // hydrogen ion transmembrane transporter activity /// 0045263 // proton-transporting ATP synthase complex, coupling factor F(o)" 19.067 16.978 n n n ruditapes_c8730 -1.135 0.743 15.925 14.03 n n n ruditapes_c17822 -1.149 0.743 13.147 11.439 n n n ruditapes_c24706 -1.193 0.743 8.145 6.827 n n n ruditapes_c28092 1.25 0.743 3.661 4.577 n n n ruditapes_c25247 -1.259 0.743 4.819 3.827 n n n ruditapes_c20887 -1.328 0.743 3.233 2.435 n n n ruditapes_c31264 1.374 0.743 1.757 2.414 n n n ruditapes2_c3186 1.619 0.743 component of the counting factor complex 0.718 1.163 n y n ruditapes2_c5033 1.709 0.743 phosphonoacetaldehyde hydrolase /// 0003824 // catalytic activity /// 0008152 // metabolic process 0.566 0.967 n y n ruditapes_c29220 -1.588 0.743 1.31 0.825 n y n ruditapes2_c2425 1.911 0.743 0.371 0.708 n y n ruditapes2_c2078 -1.69 0.743 1.05 0.621 n y n ruditapes_c19934 -1.819 0.743 0.838 0.46 n y n ruditapes_lrc32318 -2.038 0.743 0.63 0.309 n y n ruditapes_c28753 3.597 0.743 0.073 0.262 n y n ruditapes_c30991 -2.224 0.743 0.522 0.235 n y n ruditapes_lrc33376 -2.224 0.743 0.521 0.234 n y n ruditapes_c7774 4.947 0.743 0.041 0.201 n y n ruditapes_c10320 -2.594 0.743 0.398 0.154 n y n ruditapes2_c6213 ? 0.743 hypothetical protein BRAFLDRAFT_231170 [Branchiostoma floridae] 0 0.108 n y n ruditapes_c13909 ? 0.743 0 0.108 n y n ruditapes_c16448 ? 0.743 0 0.108 n y n ruditapes_c23461 ? 0.743 0 0.108 n y n ruditapes_c23897 ? 0.743 0 0.108 n y n ruditapes_c26612 ? 0.743 0 0.108 n y n ruditapes_c27914 ? 0.743 0 0.108 n y n ruditapes2_lrc5374 ? 0.743 signal transduction protein with efhand domain 0 0.107 n y n ruditapes_c12175 ? 0.743 0 0.107 n y n ruditapes_c14953 ? 0.743 0 0.107 n y n ruditapes_c17893 ? 0.743 0 0.107 n y n ruditapes_c19180 ? 0.743 0 0.107 n y n ruditapes_c19279 ? 0.743 0 0.107 n y n ruditapes_c21419 ? 0.743 0 0.107 n y n ruditapes_c22778 ? 0.743 0 0.107 n y n ruditapes_lrc34066 ? 0.743 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 0 0.107 n y n ruditapes_c23134 -3.336 0.743 0.287 0.086 n y n ruditapes_lrc26843 -6.671 0.743 prp1_medtr ame: full=repetitive proline-rich cell wall protein 1 flags: precursor 0.172 0.026 n y n ruditapes_c17426 -6.671 0.743 0.171 0.026 n y n ruditapes_c27032 -? 0.743 0.107 0 n y n ruditapes_c27558 -? 0.743 0.107 0 n y n ruditapes_c4670 -? 0.743 0.107 0 n y n ruditapes2_c4295 1.148 0.744 eukaryotic translation initiation factor subunit 2 36kda /// 0044444 // cytoplasmic part /// 0005488 // binding 9.456 10.858 n n n ruditapes_c17168 -1.192 0.744 8.14 6.828 n n n ruditapes_c22682 -1.232 0.744 5.824 4.727 n n n ruditapes_c19348 -1.235 0.744 5.678 4.596 n n n ruditapes_c14453 1.249 0.744 3.652 4.562 n n n ruditapes_c7383 1.252 0.744 3.55 4.444 n n n ruditapes_c31597 1.266 0.744 3.236 4.096 n n n ruditapes_c15253 1.277 0.744 3.006 3.838 n n n ruditapes_c18856 -1.282 0.744 4.13 3.222 n n n ruditapes_c16881 1.349 0.744 pol polyprotein 1.967 2.653 n n n ruditapes_c25731 1.372 0.744 1.755 2.407 n n n ruditapes_c22178 -1.341 0.744 3.017 2.249 n n n ruditapes_c19585 1.392 0.744 1.598 2.224 n n n ruditapes_lrc35848 -1.379 0.744 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 2.54 1.842 n n n ruditapes_c24130 -1.575 0.744 1.344 0.853 n y n ruditapes2_c2173 1.799 0.744 0.459 0.826 n y n ruditapes_c15269 -1.603 0.744 1.254 0.782 n y n ruditapes_c28429 -1.668 0.744 1.091 0.654 n y n ruditapes_c12714 -1.807 0.744 0.846 0.468 n y n ruditapes_lrc21631 -1.819 0.744 0.83 0.456 n y n ruditapes_lrc10998 -1.906 0.744 0.735 0.386 n y n ruditapes2_c967 -2.224 0.744 0.517 0.233 n y n ruditapes2_c442 5.846 0.744 col protein 0.031 0.181 n y n ruditapes_c13585 -2.78 0.744 0.357 0.128 n y n ruditapes_c8410 -2.78 0.744 0.357 0.128 n y n ruditapes_c17912 -2.965 0.744 0.327 0.11 n y n ruditapes_c21336 -2.965 0.744 src family kinase "/// 0007395 // dorsal closure, spreading of leading edge cells /// 0004713 // protein tyrosine kinase activity /// 0007476 // imaginal disc-derived wing morphogenesis /// 0007424 // open tracheal system development /// 0005912 // adherens junction /// 0018108 // peptidyl-tyrosine phosphorylation /// 0050896 // response to stimulus /// 0042059 // negative regulation of epidermal growth factor receptor signaling pathway /// 0046529 // imaginal disc fusion, thorax closure /// 0048749 // compound eye development /// 0007435 // salivary gland morphogenesis /// 0007243 // protein kinase cascade" 0.327 0.11 n y n ruditapes2_c2311 ? 0.744 0 0.107 n y n ruditapes_c15719 ? 0.744 0 0.107 n y n ruditapes_c25010 ? 0.744 0 0.107 n y n ruditapes_c29032 ? 0.744 0 0.107 n y n ruditapes_c30941 ? 0.744 0 0.107 n y n ruditapes_lrc34168 ? 0.744 tempt_aplca ame: full=temptin flags: precursor 0 0.107 n y n ruditapes2_c1402 ? 0.744 dynein light chain cytoplasmic /// 0007290 // spermatid nucleus elongation /// 0007476 // imaginal disc-derived wing morphogenesis /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005875 // microtubule associated complex /// 0005886 // plasma membrane /// 0007291 // sperm individualization /// 0017111 // nucleoside-triphosphatase activity /// 0005829 // cytosol /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity 0 0.106 n y n ruditapes_c13803 ? 0.744 0 0.106 n y n ruditapes_c18536 ? 0.744 0 0.106 n y n ruditapes_c20437 ? 0.744 0 0.106 n y n ruditapes_c21606 ? 0.744 hypothetical protein BGP_5273 [Beggiatoa sp. PS] 0 0.106 n y n ruditapes_c23491 ? 0.744 0 0.106 n y n ruditapes_c28984 ? 0.744 0 0.106 n y n ruditapes_c9812 ? 0.744 0 0.106 n y n ruditapes_c38064 -3.336 0.744 0.285 0.086 n y n ruditapes_c15473 -3.336 0.744 0.285 0.085 n y n ruditapes_c16430 -3.336 0.744 0.285 0.085 n y n ruditapes_c5840 -4.448 0.744 0.219 0.049 n y n ruditapes_c29711 -6.671 0.744 0.171 0.026 n y n ruditapes_c14193 -? 0.744 0.107 0 n y n ruditapes_c28050 -? 0.744 0.107 0 n y n ruditapes_c29286 -? 0.744 0.107 0 n y n ruditapes_c6710 -? 0.744 0.107 0 n y n ruditapes_lrc30605 -? 0.744 0.107 0 n y n ruditapes_c27310 -? 0.744 0.106 0 n y n ruditapes2_lrc4396 1.13 0.745 ribosomal protein l7a /// 0042254 // ribosome biogenesis /// 0005840 // ribosome 11.958 13.514 n n n ruditapes_c26400 1.17 0.745 7.296 8.539 n n n ruditapes_c5336 -1.184 0.745 8.787 7.423 n n n ruditapes_c21506 1.255 0.745 3.461 4.343 n n n ruditapes_c26789 -1.271 0.745 4.401 3.463 n n n ruditapes_lrc35015 1.37 0.745 40s ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development 1.751 2.399 n n n ruditapes2_c4059 -1.372 0.745 2.596 1.893 n n n ruditapes_c23276 -1.379 0.745 2.519 1.827 n n n ruditapes_c26707 -1.435 0.745 2.029 1.414 n n n ruditapes_c21430 -1.483 0.745 1.727 1.165 n n n ruditapes_c8297 1.63 0.745 PREDICTED: hypothetical protein [Homo sapiens] 0.683 1.114 n y n ruditapes_c4686 1.635 0.745 0.672 1.098 n y n ruditapes_lrc9903 1.709 0.745 0.557 0.951 n y n ruditapes_c27707 -1.631 0.745 1.169 0.717 n y n ruditapes_c31526 -1.647 0.745 sulfotransferase member 1 /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0016740 // transferase activity /// 0044424 // intracellular part 1.128 0.685 n y n ruditapes2_lrc4929 2.069 0.745 0.28 0.58 n y n ruditapes_c9227 -1.779 0.745 0.883 0.496 n y n ruditapes2_c1612 2.698 0.745 0.135 0.363 n y n ruditapes_c22206 -1.946 0.745 0.688 0.354 n y n ruditapes_c20006 -1.977 0.745 phosphodiesterase 12 0.663 0.335 n y n ruditapes_c5076 3.148 0.745 0.094 0.296 n y n ruditapes_c5368 3.148 0.745 0.094 0.296 n y n ruditapes_lrc32958 3.597 0.745 0.072 0.258 n y n ruditapes_c12193 -2.224 0.745 0.516 0.232 n y n ruditapes_c31440 -2.78 0.745 0.356 0.128 n y n ruditapes_c33308 -2.78 0.745 transforming growth beta-induced /// 0005576 // extracellular region /// 0009987 // cellular process 0.356 0.128 n y n ruditapes2_c1728 -2.78 0.745 galactose-specific c-type 0.355 0.128 n y n ruditapes_c11626 ? 0.745 0 0.106 n y n ruditapes_c14847 ? 0.745 0 0.106 n y n ruditapes_c18543 ? 0.745 0 0.106 n y n ruditapes_c21382 ? 0.745 von willebrand factor type egf and pentraxin domain containing 1 0 0.106 n y n ruditapes_c25507 ? 0.745 0 0.106 n y n ruditapes_c7869 ? 0.745 asialoglycoprotein receptor 1 /// 0031668 // cellular response to extracellular stimulus /// 0016020 // membrane /// 0042803 // protein homodimerization activity 0 0.106 n y n ruditapes_lrc34748 ? 0.745 angiopoietin-like 2 /// 0005576 // extracellular region 0 0.106 n y n ruditapes_lrc35591 ? 0.745 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0 0.106 n y n ruditapes_lrc38497 ? 0.745 0 0.106 n y n ruditapes_c12628 ? 0.745 0 0.105 n y n ruditapes_c18863 ? 0.745 0 0.105 n y n ruditapes_c2980 ? 0.745 galaxin protein 0 0.105 n y n ruditapes_c10293 -3.336 0.745 sushi domain containing 2 /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0005737 // cytoplasm 0.283 0.085 n y n ruditapes_c14196 -3.336 0.745 0.283 0.085 n y n ruditapes_c22364 -3.336 0.745 0.283 0.085 n y n ruditapes_lrc17986 -6.671 0.745 0.169 0.025 n y n ruditapes_lrc38952 -6.671 0.745 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0.169 0.025 n y n ruditapes2_lrc4380 -? 0.745 0.106 0 n y n ruditapes_c15788 -? 0.745 hypothetical protein BRAFLDRAFT_74498 [Branchiostoma floridae] 0.106 0 n y n ruditapes_c21202 -? 0.745 0.106 0 n y n ruditapes_c31040 -? 0.745 0.106 0 n y n ruditapes_lrc32041 -? 0.745 0.105 0 n y n ruditapes_c14247 -1.171 0.746 9.898 8.451 n n n ruditapes_c10815 -1.223 0.746 6.147 5.028 n n n ruditapes_c26407 1.304 0.746 2.494 3.253 n n n ruditapes_c30690 -1.294 0.746 3.796 2.933 n n n ruditapes_c21225 -1.3 0.746 3.688 2.837 n n n ruditapes_c26666 -1.319 0.746 3.321 2.518 n n n ruditapes_c12426 1.37 0.746 1.75 2.397 n n n ruditapes_c16407 1.594 0.746 0.752 1.199 n y n ruditapes_c21720 -1.575 0.746 1.325 0.841 n y n ruditapes_c27749 -1.631 0.746 1.165 0.715 n y n ruditapes_c17560 -1.701 0.746 1.007 0.592 n y n ruditapes_c23100 -1.701 0.746 1.007 0.592 n y n ruditapes_c911 -1.715 0.746 18w 0.979 0.571 n y n ruditapes2_c5418 -1.779 0.746 bcl-2 protein 0.872 0.49 n y n ruditapes_lrc34898 -1.779 0.746 mitochondrial 50s ribosomal protein 0.872 0.49 n y n ruditapes_c24762 2.473 0.746 0.166 0.411 n y n ruditapes_s39986 2.698 0.746 0.133 0.359 n y n ruditapes_c17039 -2.038 0.746 0.613 0.301 n y n ruditapes_c14498 -2.224 0.746 0.511 0.23 n y n ruditapes_c21500 -2.224 0.746 0.511 0.23 n y n ruditapes_c7417 -2.669 0.746 0.372 0.14 n y n ruditapes_s37089 -2.965 0.746 cyclophilin a 0.322 0.109 n y n ruditapes2_c475 ? 0.746 0 0.105 n y n ruditapes_c11977 ? 0.746 0 0.105 n y n ruditapes_c14849 ? 0.746 0 0.105 n y n ruditapes_c17373 ? 0.746 0 0.105 n y n ruditapes_c18539 ? 0.746 0 0.105 n y n ruditapes_c18882 ? 0.746 0 0.105 n y n ruditapes_c22410 ? 0.746 0 0.105 n y n ruditapes_c23229 ? 0.746 0 0.105 n y n ruditapes_c30580 ? 0.746 0 0.105 n y n ruditapes_c6337 ? 0.746 0 0.105 n y n ruditapes_lrc17775 ? 0.746 0 0.105 n y n ruditapes_lrc32981 ? 0.746 predicted protein [Nematostella vectensis] 0 0.105 n y n ruditapes_s35494 ? 0.746 0 0.105 n y n ruditapes2_lrc6669 -3.336 0.746 chromosome 4 open reading frame 34 /// 0005515 // protein binding 0.281 0.084 n y n ruditapes_s34454 -4.448 0.746 0.215 0.048 n y n ruditapes_c24691 -6.671 0.746 0.167 0.025 n y n ruditapes_c2836 -6.671 0.746 0.167 0.025 n y n ruditapes_c122 -? 0.746 isoform b 0.105 0 n y n ruditapes_c25738 -? 0.746 0.105 0 n y n ruditapes_lrc34697 -? 0.746 0.105 0 n y n ruditapes_c21515 -? 0.746 0.104 0 n y n ruditapes_c27772 -? 0.746 0.104 0 n y n ruditapes_c28388 -? 0.746 0.104 0 n y n ruditapes_c5540 1.157 0.747 8.304 9.607 n n n ruditapes_c11005 1.167 0.747 7.434 8.672 n n n ruditapes2_c576 -1.19 0.747 8.126 6.828 n n n ruditapes2_c1474 1.251 0.747 small nuclear ribonucleoprotein e /// 0000245 // spliceosome assembly /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 3.521 4.404 n n n ruditapes_c6472 1.277 0.747 2.93 3.743 n n n ruditapes_c1424 1.308 0.747 2.415 3.16 n n n ruditapes_c28175 1.349 0.747 1.918 2.587 n n n ruditapes_s39975 1.413 0.747 1.42 2.007 n n n ruditapes_c9474 -1.359 0.747 2.698 1.986 n n n ruditapes_c19114 1.447 0.747 1.234 1.785 n n n ruditapes_lrc8555 1.456 0.747 glutathione s-transferase pi-class /// 0004364 // glutathione transferase activity /// 0008152 // metabolic process 1.19 1.732 n n n ruditapes2_c855 1.518 0.747 protein 0.945 1.435 n y n ruditapes_c16942 -1.498 0.747 chromosome 6 open reading frame 27 1.623 1.083 n n n ruditapes_lrc36100 1.754 0.747 muscle positioning family member (mup-4) /// 0007275 // multicellular organismal development /// 0040007 // growth /// 0005488 // binding /// 0016020 // membrane 0.492 0.862 n y n ruditapes2_lrc3170 1.799 0.747 0.447 0.805 n y n ruditapes_c13086 -1.853 0.747 0.772 0.416 n y n ruditapes2_lrc4778 3.148 0.747 0.093 0.292 n y n ruditapes_c17173 -2.224 0.747 0.507 0.228 n y n ruditapes_c10016 -2.224 0.747 0.505 0.227 n y n ruditapes_c22712 -2.78 0.747 0.349 0.125 n y n ruditapes_s37317 -2.965 0.747 galactoside- 3 /// 0005488 // binding /// 0044424 // intracellular part 0.321 0.108 n y n ruditapes2_c870 -2.965 0.747 0.32 0.108 n y n ruditapes_s39969 -2.965 0.747 unnamed protein product [Tetraodon nigroviridis] 0.32 0.108 n y n ruditapes2_c1507 ? 0.747 matrilin 3b 0 0.104 n y n ruditapes_c1961 ? 0.747 0 0.104 n y n ruditapes_c25065 ? 0.747 0 0.104 n y n ruditapes_c30975 ? 0.747 0 0.104 n y n ruditapes_c4599 ? 0.747 0 0.104 n y n ruditapes_c7139 -3.336 0.747 0.279 0.084 n y n ruditapes_lrc35986 -4.448 0.747 stanniocalcin-like protein 0.214 0.048 n y n ruditapes_c12446 -6.671 0.747 0.167 0.025 n y n ruditapes_c10835 -? 0.747 tripartite motif-containing 24 0.104 0 n y n ruditapes_c24759 -? 0.747 0.104 0 n y n ruditapes_c25404 -? 0.747 0.104 0 n y n ruditapes_c26226 -? 0.747 0.104 0 n y n ruditapes2_lrc5099 -1.062 0.748 tyb_aplca ame: full=thymosin beta ame: full=beta-thymosin 74.797 70.43 n n n ruditapes_c28663 -1.163 0.748 10.708 9.207 n n n ruditapes_lrc39731 1.21 0.748 4.831 5.845 n n n ruditapes2_c3182 -1.254 0.748 mitochondrial nadh:ubiquinone oxidoreductase esss 4.831 3.853 n n n ruditapes_c28816 -1.322 0.748 3.204 2.424 n n n ruditapes_c11949 -1.326 0.748 3.137 2.366 n n n ruditapes_c25696 1.374 0.748 1.684 2.313 n n n ruditapes_c30271 -1.382 0.748 2.423 1.753 n n n ruditapes_c16343 -1.403 0.748 2.23 1.59 n n n ruditapes_c3898 -1.404 0.748 2.223 1.583 n n n ruditapes_c10292 -1.472 0.748 1.737 1.179 n n n ruditapes2_c1412 1.614 0.748 0.696 1.123 n y n ruditapes_lrc6843 -1.499 0.748 1.6 1.068 n n n ruditapes_c31535 -1.598 0.748 1.232 0.771 n y n ruditapes_c12382 2.024 0.748 nadh dehydrogenase subunit 1 /// 0044464 // cell part 0.294 0.595 n y n ruditapes_c17779 -1.694 0.748 1.004 0.593 n y n ruditapes_lrc36704 2.473 0.748 ring-box 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0006281 // DNA repair /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0019005 // SCF ubiquitin ligase complex /// 0008270 // zinc ion binding /// 0005680 // anaphase-promoting complex /// 0004842 // ubiquitin-protein ligase activity /// 0008190 // eukaryotic initiation factor 4E binding /// 0030891 // VCB complex 0.164 0.404 n y n ruditapes2_lrc5142 -2.78 0.748 calcium-binding ef-hand domain protein 0.347 0.125 n y n ruditapes2_c6866 -2.78 0.748 cornifelin homolog a 0.346 0.124 n y n ruditapes_s38533 -2.965 0.748 0.318 0.107 n y n ruditapes_c15054 ? 0.748 0 0.104 n y n ruditapes_c7857 ? 0.748 angiopoietin-like 1 /// 0001525 // angiogenesis 0 0.104 n y n ruditapes_c18695 ? 0.748 0 0.103 n y n ruditapes_c22406 ? 0.748 0 0.103 n y n ruditapes_c28363 ? 0.748 0 0.103 n y n ruditapes_lrc14588 ? 0.748 0 0.103 n y n ruditapes_lrc29705 ? 0.748 0 0.103 n y n ruditapes_lrc32311 ? 0.748 0 0.103 n y n ruditapes2_c495 -3.706 0.748 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0003824 // catalytic activity 0.249 0.067 n y n ruditapes_c26405 -4.448 0.748 0.211 0.048 n y n ruditapes_c17171 -? 0.748 0.103 0 n y n ruditapes_c21393 -? 0.748 0.103 0 n y n ruditapes_c22288 -? 0.748 0.103 0 n y n ruditapes_c24397 -? 0.748 0.103 0 n y n ruditapes_c24539 -? 0.748 0.103 0 n y n ruditapes_c31284 -? 0.748 0.103 0 n y n ruditapes_c31832 -? 0.748 0.103 0 n y n ruditapes_c2509 -1.153 0.749 11.941 10.352 n n n ruditapes_c8514 -1.166 0.749 10.264 8.802 n n n ruditapes_c9679 -1.184 0.749 8.514 7.192 n n n ruditapes2_c2041 1.217 0.749 4.483 5.457 n n n ruditapes_c17726 1.295 0.749 2.583 3.344 n n n ruditapes2_lrc4774 1.335 0.749 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 2.035 2.717 n n n ruditapes_c7576 1.433 0.749 1.276 1.829 n n n ruditapes_c23915 1.453 0.749 nitric oxide synthase-like protein 1.187 1.725 n n n ruditapes_c17542 -1.512 0.749 1.527 1.01 n y n ruditapes_c749 -1.601 0.749 coiled-coil-helix-coiled-coil-helix domain containing 4 1.209 0.755 n y n ruditapes_c11913 -1.631 0.749 1.131 0.694 n y n ruditapes_c24488 2.248 0.749 0.211 0.474 n y n ruditapes_lrc29003 2.248 0.749 initiation factor 5a /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity 0.211 0.474 n y n ruditapes_c16072 2.398 0.749 0.175 0.421 n y n ruditapes_c24798 -1.882 0.749 fucu homolog 0.727 0.387 n y n ruditapes_c11427 -1.946 0.749 0.668 0.343 n y n ruditapes_c30138 -2.224 0.749 0.499 0.225 n y n ruditapes_c19850 -2.224 0.749 adp-ribosylation factor 0.498 0.224 n y n ruditapes_lrc32133 -2.224 0.749 0.496 0.223 n y n ruditapes_s40190 -2.224 0.749 ribosomal protein rpl35a 0.496 0.223 n y n ruditapes2_c1994 ? 0.749 0 0.103 n y n ruditapes_c22397 ? 0.749 0 0.103 n y n ruditapes_c24581 ? 0.749 0 0.103 n y n ruditapes_c25684 ? 0.749 cytochrome p450 cyp18a1 /// 0046872 // metal ion binding /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0 0.103 n y n ruditapes_c28577 ? 0.749 0 0.103 n y n ruditapes_lrc28700 ? 0.749 0 0.103 n y n ruditapes2_lrc3697 ? 0.749 keratin associated protein 19-3 0 0.102 n y n ruditapes_c15897 ? 0.749 0 0.102 n y n ruditapes_c21313 ? 0.749 0 0.102 n y n ruditapes_c22150 ? 0.749 0 0.102 n y n ruditapes_c22579 ? 0.749 0 0.102 n y n ruditapes_c23965 ? 0.749 0 0.102 n y n ruditapes_c5462 ? 0.749 0 0.102 n y n ruditapes_lrc31947 ? 0.749 0 0.102 n y n ruditapes2_c3347 -3.336 0.749 phage lysozyme 0.275 0.082 n y n ruditapes_c25953 -4.448 0.749 0.211 0.047 n y n ruditapes_c23798 -4.448 0.749 0.21 0.047 n y n ruditapes_c16806 -6.671 0.749 0.164 0.025 n y n ruditapes_c27993 -? 0.749 0.103 0 n y n ruditapes_lrc11172 -? 0.749 0.103 0 n y n ruditapes_c26233 -? 0.749 0.102 0 n y n ruditapes_c27150 -? 0.749 0.102 0 n y n ruditapes_c11692 1.127 0.75 12.057 13.588 n n n ruditapes2_c1182 1.139 0.75 10.196 11.611 n n n ruditapes2_c2026 1.187 0.75 5.858 6.954 n n n ruditapes_lrc38312 -1.21 0.75 6.61 5.461 n n n ruditapes_c15135 -1.256 0.75 4.642 3.696 n n n ruditapes_c16734 -1.275 0.75 4.119 3.231 n n n ruditapes_c8864 1.33 0.75 2.08 2.766 n n n ruditapes_c9061 -1.302 0.75 3.494 2.683 n n n ruditapes_c9649 -1.31 0.75 3.365 2.569 n n n ruditapes2_c914 -1.31 0.75 3.344 2.552 n n n ruditapes_c27334 1.349 0.75 1.88 2.536 n n n ruditapes_c30004 1.349 0.75 1.871 2.524 n n n ruditapes_lrc25458 -1.368 0.75 2.536 1.853 n n n ruditapes_c21831 -1.415 0.75 2.089 1.476 n n n ruditapes_c4769 -1.425 0.75 2.018 1.416 n n n ruditapes2_c1885 1.602 0.75 cytochrome oxidase subunit i /// 0006091 // generation of precursor metabolites and energy /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0016020 // membrane /// 0016491 // oxidoreductase activity /// 0005506 // iron ion binding 0.708 1.134 n y n ruditapes_lrc35746 1.606 0.75 ribosomal protein l8 /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part 0.702 1.127 n y n ruditapes_c21954 -1.506 0.75 1.543 1.024 n y n ruditapes_c28033 -1.557 0.75 1.342 0.862 n y n ruditapes_c10494 1.799 0.75 rho gtpase activating protein 15 /// 0005515 // protein binding /// 0030675 // Rac GTPase activator activity /// 0005622 // intracellular /// 0008360 // regulation of cell shape 0.436 0.784 n y n ruditapes_c7206 -1.69 0.75 sialic acid binding lectin 0.994 0.588 n y n ruditapes_c16067 -1.718 0.75 0.944 0.549 n y n ruditapes_c625 -1.722 0.75 0.935 0.543 n y n ruditapes_c18688 -1.819 0.75 defective isoform b /// 0045449 // regulation of transcription /// 0043565 // sequence-specific DNA binding 0.793 0.436 n y n ruditapes_c11602 2.548 0.75 amidohydrolase 2 0.148 0.377 n y n ruditapes_c14121 -1.977 0.75 metabotropic gaba-b receptor subtype 1 cg15274-pa 0.638 0.323 n y n ruditapes_c27764 3.597 0.75 0.069 0.247 n y n ruditapes2_c1321 3.597 0.75 0.068 0.246 n y n ruditapes_c34524 3.597 0.75 0.068 0.246 n y n ruditapes_c16941 -2.965 0.75 0.312 0.105 n y n ruditapes_c17444 -2.965 0.75 0.311 0.105 n y n ruditapes_c11742 ? 0.75 complement component q subcomponent-like 2 0 0.102 n y n ruditapes_c19748 ? 0.75 0 0.102 n y n ruditapes_c22428 ? 0.75 iq motif containing gtpase activating protein 2 /// 0005516 // calmodulin binding /// 0005099 // Ras GTPase activator activity /// 0015629 // actin cytoskeleton /// 0003779 // actin binding /// 0005095 // GTPase inhibitor activity /// 0051056 // regulation of small GTPase mediated signal transduction 0 0.102 n y n ruditapes_c25435 ? 0.75 0 0.102 n y n ruditapes_c28104 ? 0.75 0 0.102 n y n ruditapes_c9371 ? 0.75 0 0.102 n y n ruditapes_s37699 ? 0.75 0 0.102 n y n ruditapes2_c1019 ? 0.75 0 0.101 n y n ruditapes_c22325 ? 0.75 0 0.101 n y n ruditapes_c7956 ? 0.75 0 0.101 n y n ruditapes_lrc32016 ? 0.75 0 0.101 n y n ruditapes_c7032 -3.336 0.75 0.271 0.081 n y n ruditapes_lrc34742 -6.671 0.75 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.162 0.024 n y n ruditapes_lrc37081 -6.671 0.75 calponin-like protein 0.162 0.024 n y n ruditapes_c26270 -? 0.75 0.102 0 n y n ruditapes_c28639 -? 0.75 0.102 0 n y n ruditapes2_lrc3633 -? 0.75 0.101 0 n y n ruditapes_c15097 -? 0.75 0.101 0 n y n ruditapes_c30026 -? 0.75 0.101 0 n y n ruditapes_c12750 -1.068 0.751 59.244 55.454 n n n ruditapes_c8078 -1.114 0.751 20.849 18.719 n n n ruditapes2_c875 -1.136 0.751 14.766 12.999 n n n ruditapes_c8077 -1.15 0.751 12.205 10.611 n n n ruditapes_c2784 -1.17 0.751 9.708 8.299 n n n ruditapes_c6572 1.192 0.751 5.529 6.59 n n n ruditapes_c22879 1.199 0.751 5.206 6.243 n n n ruditapes_lrc7347 -1.202 0.751 7.079 5.891 n n n ruditapes2_lrc6833 1.221 0.751 4.317 5.27 n n n ruditapes2_c3996 1.232 0.751 3.929 4.84 n n n ruditapes_c30768 -1.254 0.751 4.71 3.757 n n n ruditapes2_lrc5263 -1.279 0.751 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 3.969 3.103 n n n ruditapes_c33463 -1.3 0.751 3.544 2.727 n n n ruditapes_c31140 -1.306 0.751 3.388 2.593 n n n ruditapes_c29183 -1.39 0.751 2.296 1.652 n n n ruditapes_c2689 -1.442 0.751 chromosome 17 open reading frame 37 1.882 1.305 n n n ruditapes_c29100 1.638 0.751 0.637 1.043 n y n ruditapes_s38531 -1.57 0.751 1.285 0.819 n y n ruditapes_c20319 -1.578 0.751 nicotinic acetylcholine receptor subunit type g 1.265 0.802 n y n ruditapes_c23203 -1.617 0.751 1.151 0.712 n y n ruditapes2_c490 -1.747 0.751 antileukoproteinase precursor 0.888 0.508 n y n ruditapes_c16959 2.398 0.751 0.172 0.414 n y n ruditapes_c14548 3.148 0.751 0.089 0.281 n y n ruditapes_c18379 3.597 0.751 0.068 0.245 n y n ruditapes_lrc34206 -2.224 0.751 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.491 0.221 n y n ruditapes_c8190 -2.965 0.751 0.31 0.105 n y n ruditapes_c16368 ? 0.751 0 0.101 n y n ruditapes_c16826 ? 0.751 0 0.101 n y n ruditapes_c28633 ? 0.751 calmodulin /// 0005488 // binding 0 0.101 n y n ruditapes_c28975 ? 0.751 0 0.101 n y n ruditapes_c30134 ? 0.751 0 0.101 n y n ruditapes_c30542 ? 0.751 0 0.101 n y n ruditapes_c7447 ? 0.751 tpr repeat-containing protein 0 0.101 n y n ruditapes_lrc32486 ? 0.751 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation 0 0.101 n y n ruditapes_c21397 ? 0.751 0 0.1 n y n ruditapes_lrc39503 -3.336 0.751 0.27 0.081 n y n ruditapes_lrc32888 -? 0.751 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0.101 0 n y n ruditapes_s36292 -? 0.751 0.101 0 n y n ruditapes_c10802 -? 0.751 0.1 0 n y n ruditapes_c23832 -? 0.751 0.1 0 n y n ruditapes_c21269 1.069 0.752 36.017 38.491 n n n ruditapes_c3423 1.193 0.752 5.446 6.497 n n n ruditapes_c4854 -1.281 0.752 3.886 3.034 n n n ruditapes_s38292 1.321 0.752 ribosomal protein l38 2.145 2.834 n n n ruditapes2_c894 -1.329 0.752 2.985 2.246 n n n ruditapes_c22745 1.405 0.752 1.404 1.973 n n n ruditapes_c13300 -1.361 0.752 c1q and tumor necrosis factor related protein 3 2.568 1.886 n n n ruditapes_c27586 -1.382 0.752 2.346 1.697 n n n ruditapes_c17408 1.499 0.752 0.969 1.452 n n n ruditapes_c19 1.73 0.752 glutathione s-transferase 0.501 0.866 n y n ruditapes2_c1657 -1.668 0.752 1.022 0.613 n y n ruditapes_c22427 -1.668 0.752 1.021 0.612 n y n ruditapes_lrc33359 -1.747 0.752 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.877 0.502 n y n ruditapes_c11613 -1.747 0.752 0.875 0.501 n y n ruditapes2_c95 -1.779 0.752 domain protein jellyroll fold domain protein 0.83 0.467 n y n ruditapes_c12572 2.473 0.752 0.158 0.39 n y n ruditapes_c7162 2.473 0.752 0.157 0.39 n y n ruditapes_c12325 2.548 0.752 tetraspanin 86d 0.146 0.371 n y n ruditapes_c29297 2.923 0.752 ino80 complex subunit c 0.105 0.307 n y n ruditapes_c10202 3.148 0.752 PREDICTED: hypothetical protein [Hydra magnipapillata] 0.089 0.28 n y n ruditapes_c21575 -2.965 0.752 0.308 0.104 n y n ruditapes_c661 -2.965 0.752 ubiquitin-like 5 /// 0019941 // modification-dependent protein catabolic process /// 0005737 // cytoplasm /// 0006464 // protein modification process 0.306 0.103 n y n ruditapes2_lrc5838 ? 0.752 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 0 0.1 n y n ruditapes_c11863 ? 0.752 0 0.1 n y n ruditapes_c19369 ? 0.752 0 0.1 n y n ruditapes_c27050 ? 0.752 0 0.1 n y n ruditapes_c28236 ? 0.752 0 0.1 n y n ruditapes_c4476 ? 0.752 angiopoietin 2 /// 0005576 // extracellular region /// 0050789 // regulation of biological process /// 0005515 // protein binding /// 0032502 // developmental process /// 0009987 // cellular process 0 0.1 n y n ruditapes_s34164 ? 0.752 0 0.1 n y n ruditapes_c24042 ? 0.752 0 0.099 n y n ruditapes_c24761 -4.448 0.752 0.206 0.046 n y n ruditapes_lrc18147 -6.671 0.752 0.16 0.024 n y n ruditapes_c25588 -? 0.752 0.1 0 n y n ruditapes_c26931 -? 0.752 0.1 0 n y n ruditapes_c28566 -? 0.752 0.1 0 n y n ruditapes_c9231 -? 0.752 0.1 0 n y n ruditapes_c11036 -1.139 0.753 ribonucleotide reductase m2 polypeptide /// 0051259 // protein oligomerization /// 0055114 // oxidation reduction /// 0009263 // deoxyribonucleotide biosynthetic process /// 0005515 // protein binding /// 0009186 // deoxyribonucleoside diphosphate metabolic process /// 0005829 // cytosol /// 0005506 // iron ion binding /// 0004748 // ribonucleoside-diphosphate reductase activity /// 0006260 // DNA replication 13.936 12.237 n n n ruditapes_c12755 -1.146 0.753 12.643 11.03 n n n ruditapes_c12520 1.21 0.753 4.64 5.616 n n n ruditapes_c12651 -1.227 0.753 5.599 4.563 n n n ruditapes_c28968 -1.356 0.753 2.616 1.929 n n n ruditapes_c14044 -1.425 0.753 1.957 1.373 n n n ruditapes_c30863 -1.506 0.753 1.5 0.996 n y n ruditapes2_lrc5606 1.799 0.753 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 0.426 0.766 n y n ruditapes_c22690 -1.639 0.753 1.08 0.659 n y n ruditapes_c22212 -1.819 0.753 dystonin isoform 2 /// 0007409 // axonogenesis /// 0005178 // integrin binding /// 0008090 // retrograde axon cargo transport /// 0007229 // integrin-mediated signaling pathway /// 0031110 // regulation of microtubule polymerization or depolymerization /// 0031122 // cytoplasmic microtubule organization /// 0015630 // microtubule cytoskeleton /// 0015629 // actin cytoskeleton /// 0051015 // actin filament binding /// 0030036 // actin cytoskeleton organization /// 0008022 // protein C-terminus binding /// 0016023 // cytoplasmic membrane-bounded vesicle /// 0008017 // microtubule binding /// 0005604 // basement membrane /// 0030056 // hemidesmosome /// 0045104 // intermediate filament cytoskeleton organization 0.776 0.426 n y n ruditapes2_lrc4093 -1.873 0.753 0.713 0.381 n y n ruditapes_c17662 -2.224 0.753 0.482 0.217 n y n ruditapes_c19558 -2.224 0.753 0.482 0.217 n y n ruditapes_c22454 -2.224 0.753 0.481 0.216 n y n ruditapes_c10087 -2.471 0.753 0.397 0.161 n y n ruditapes2_lrc5955 -2.594 0.753 tandem repeat galectin 0.369 0.142 n y n ruditapes_c18759 -2.965 0.753 0.305 0.103 n y n ruditapes2_c1844 ? 0.753 0 0.099 n y n ruditapes2_c430 ? 0.753 0 0.099 n y n ruditapes_c28642 ? 0.753 0 0.099 n y n ruditapes_c29173 ? 0.753 short-chain dehydrogenase reductase sdr /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0 0.099 n y n ruditapes_s38339 ? 0.753 0 0.099 n y n ruditapes_c4711 -3.113 0.753 histone deacetylase complex subunit sap18 /// 0016580 // Sin3 complex /// 0003714 // transcription corepressor activity /// 0000122 // negative regulation of transcription from RNA polymerase II promoter 0.286 0.092 n y n ruditapes_c15536 -4.448 0.753 0.203 0.046 n y n ruditapes_c22640 -4.448 0.753 0.202 0.046 n y n ruditapes2_c588 -6.671 0.753 0.158 0.024 n y n ruditapes_c11890 -? 0.753 0.099 0 n y n ruditapes_c15576 -? 0.753 0.099 0 n y n ruditapes_c15602 -? 0.753 0.099 0 n y n ruditapes_c21594 -? 0.753 0.099 0 n y n ruditapes_c22810 -? 0.753 0.099 0 n y n ruditapes_c30488 -? 0.753 0.099 0 n y n ruditapes_c31900 1.03 0.754 150.148 154.585 n n n ruditapes_c11436 -1.122 0.754 17.607 15.687 n n n ruditapes_c12558 -1.172 0.754 9.195 7.846 n n n ruditapes_c3240 -1.209 0.754 6.464 5.348 n n n ruditapes_c2843 -1.213 0.754 6.265 5.165 n n n ruditapes_c1130 -1.243 0.754 4.924 3.961 n n n ruditapes_c4303 -1.249 0.754 4.729 3.786 n n n ruditapes2_c3046 1.282 0.754 translation elongation 2.655 3.405 n n n ruditapes_c8318 1.3 0.754 2.377 3.091 n n n ruditapes_c29451 -1.35 0.754 2.65 1.963 n n n ruditapes_c10969 -1.452 0.754 1.776 1.223 n n n ruditapes2_c2499 1.574 0.754 0.748 1.177 n y n ruditapes_c24989 -1.483 0.754 protein 1.606 1.084 n n n ruditapes_c10984 1.735 0.754 activating signal cointegrator 1 complex subunit 3-like 1 isoform 2 /// 0005524 // ATP binding /// 0008026 // ATP-dependent helicase activity /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0005682 // U5 snRNP /// 0000354 // cis assembly of pre-catalytic spliceosome 0.486 0.844 n y n ruditapes_c6048 1.799 0.754 0.423 0.76 n y n ruditapes_c18276 -1.617 0.754 1.12 0.692 n y n ruditapes2_c3081 -1.652 0.754 1.042 0.631 n y n ruditapes_c19099 -1.747 0.754 0.863 0.494 n y n ruditapes_c22608 2.473 0.754 0.155 0.384 n y n ruditapes_lrc32546 2.698 0.754 c-type lectin 0.125 0.337 n y n ruditapes_c10634 -1.977 0.754 0.617 0.312 n y n ruditapes_c985 -2.001 0.754 sam domain and hd domain-containing protein 1 (dendritic cell-derived ifng-induced protein) (monocyte protein 5) (mop-5) /// 0005634 // nucleus 0.599 0.299 n y n ruditapes_c13046 -2.224 0.754 0.478 0.215 n y n ruditapes_c29351 -2.224 0.754 0.477 0.214 n y n ruditapes_c31129 -2.541 0.754 0.378 0.149 n y n ruditapes_c29005 -2.78 0.754 0.329 0.118 n y n ruditapes_c7418 -2.965 0.754 0.303 0.102 n y n ruditapes_s35527 -2.965 0.754 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.303 0.102 n y n ruditapes_c11981 ? 0.754 0 0.099 n y n ruditapes_c12076 ? 0.754 0 0.098 n y n ruditapes_c12699 ? 0.754 0 0.098 n y n ruditapes_c18487 ? 0.754 0 0.098 n y n ruditapes_c20369 ? 0.754 0 0.098 n y n ruditapes_lrc33412 ? 0.754 0 0.098 n y n ruditapes_c4324 -3.336 0.754 0.262 0.079 n y n ruditapes_c20407 -4.448 0.754 0.201 0.045 n y n ruditapes_c23222 -? 0.754 0.099 0 n y n ruditapes_c24338 -? 0.754 0.099 0 n y n ruditapes_c28932 -? 0.754 0.099 0 n y n ruditapes2_c2124 -? 0.754 0.098 0 n y n ruditapes2_c2292 -? 0.754 0.098 0 n y n ruditapes_c24572 -? 0.754 0.098 0 n y n ruditapes_c26718 -? 0.754 0.098 0 n y n ruditapes_c31652 -? 0.754 0.098 0 n y n ruditapes_s37118 -? 0.754 0.098 0 n y n ruditapes2_c1614 1.024 0.755 ribosomal protein l28 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 212.278 217.29 n n n ruditapes_c28631 1.072 0.755 paramyosin /// 0005576 // extracellular region /// 0003774 // motor activity /// 0005198 // structural molecule activity /// 0006941 // striated muscle contraction /// 0005863 // striated muscle thick filament 32.639 34.981 n n n ruditapes_c25466 -1.09 0.755 31.994 29.346 n n n ruditapes_c4662 1.118 0.755 13.232 14.792 n n n ruditapes_lrc9236 -1.159 0.755 10.65 9.191 n n n ruditapes_c17335 -1.227 0.755 5.545 4.519 n n n ruditapes_c23724 -1.259 0.755 4.375 3.475 n n n ruditapes_c24924 -1.284 0.755 3.74 2.912 n n n ruditapes_c29371 1.382 0.755 1.521 2.102 n n n ruditapes2_c2564 -1.379 0.755 reelin /// 0048265 // response to pain /// 0005488 // binding /// 0021511 // spinal cord patterning /// 0021800 // cerebral cortex tangential migration /// 0018108 // peptidyl-tyrosine phosphorylation /// 0001764 // neuron migration /// 0005615 // extracellular space /// 0042403 // thyroid hormone metabolic process /// 0007626 // locomotory behavior /// 0005737 // cytoplasm /// 0045860 // positive regulation of protein kinase activity /// 0005578 // proteinaceous extracellular matrix /// 0004712 // protein serine/threonine/tyrosine kinase activity /// 0010001 // glial cell differentiation /// 0007411 // axon guidance /// 0051057 // positive regulation of small GTPase mediated signal transduction /// 0030425 // dendrite 2.323 1.684 n n n ruditapes_c3359 1.486 0.755 hydroxysteroid (17-beta) dehydrogenase 8 /// 0005624 // membrane fraction /// 0004303 // estradiol 17-beta-dehydrogenase activity /// 0005488 // binding /// 0005886 // plasma membrane /// 0008210 // estrogen metabolic process /// 0005740 // mitochondrial envelope /// 0008209 // androgen metabolic process /// 0050327 // testosterone 17-beta-dehydrogenase activity 0.996 1.479 n n n ruditapes_c4427 1.664 0.755 0.574 0.955 n y n ruditapes_c15631 -1.525 0.755 adp-ribosylation factor-like 8a /// 0044446 // intracellular organelle part /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0032561 // guanyl ribonucleotide binding /// 0015631 // tubulin binding 1.407 0.923 n y n ruditapes_s35785 -1.547 0.755 chromosome 9 open reading frame 156 1.317 0.851 n y n ruditapes_c11737 1.754 0.755 thiolester containing protein ii isoform a 0.46 0.806 n y n ruditapes_c11237 -1.606 0.755 1.141 0.71 n y n ruditapes_c14009 -1.617 0.755 loc89944-prov protein /// 0005975 // carbohydrate metabolic process /// 0043169 // cation binding /// 0009341 // beta-galactosidase complex /// 0004565 // beta-galactosidase activity 1.112 0.687 n y n ruditapes2_c6355 -1.747 0.755 0.854 0.489 n y n ruditapes_c20557 -1.779 0.755 0.815 0.458 n y n ruditapes_c30744 -1.779 0.755 0.812 0.456 n y n ruditapes_c28899 -1.807 0.755 reverse transcriptase-like protein 0.775 0.429 n y n ruditapes_c34312 3.148 0.755 odd oz protein 0.087 0.274 n y n ruditapes_c14285 -2.224 0.755 serine threonine-protein partial 0.474 0.213 n y n ruditapes_c14883 -2.224 0.755 0.473 0.213 n y n ruditapes_c28748 -2.224 0.755 0.473 0.213 n y n ruditapes_c7525 -2.224 0.755 sialic acid binding lectin 0.472 0.212 n y n ruditapes_lrc36186 -2.224 0.755 0.472 0.212 n y n ruditapes_c29623 -2.594 0.755 0.361 0.139 n y n ruditapes_lrc28000 ? 0.755 0 0.098 n y n ruditapes2_lrc6549 ? 0.755 0 0.097 n y n ruditapes_c11242 ? 0.755 0 0.097 n y n ruditapes_c12340 ? 0.755 c-type lectin domain family 4 member e 0 0.097 n y n ruditapes_c1768 ? 0.755 0 0.097 n y n ruditapes_c29166 ? 0.755 0 0.097 n y n ruditapes_c31864 ? 0.755 0 0.097 n y n ruditapes_c21959 -3.113 0.755 0.283 0.091 n y n ruditapes_c12564 -3.336 0.755 0.261 0.078 n y n ruditapes_c25887 -4.448 0.755 0.2 0.045 n y n ruditapes_s33175 -4.448 0.755 0.2 0.045 n y n ruditapes_c27353 -4.448 0.755 0.199 0.045 n y n ruditapes_c25361 -? 0.755 0.097 0 n y n ruditapes_c5435 -? 0.755 ependymin related protein-1 precursor 0.097 0 n y n ruditapes_c9282 -1.174 0.756 8.862 7.547 n n n ruditapes_c16974 -1.245 0.756 4.777 3.836 n n n ruditapes_c23012 1.274 0.756 2.768 3.527 n n n ruditapes_lrc18619 -1.314 0.756 3.122 2.376 n n n ruditapes_c19682 -1.32 0.756 3.036 2.299 n n n ruditapes_c14088 -1.372 0.756 2.371 1.728 n n n ruditapes_c28153 -1.394 0.756 2.165 1.553 n n n ruditapes_c10390 -1.393 0.756 ets at 98b cg5583-pa "/// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus" 2.163 1.552 n n n ruditapes_c19165 -1.425 0.756 1.918 1.345 n n n ruditapes_c8967 -1.439 0.756 1.83 1.272 n n n ruditapes2_c1041 -1.441 0.756 tnf superfamily member 14 1.814 1.258 n n n ruditapes2_c2585 1.561 0.756 0.767 1.197 n y n ruditapes_lrc34725 1.799 0.756 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.414 0.744 n y n ruditapes_c29250 1.874 0.756 novel protein 0.357 0.668 n y n ruditapes2_c1981 -1.647 0.756 1.03 0.625 n y n ruditapes_c29410 1.949 0.756 0.309 0.603 n y n ruditapes_c29626 -1.74 0.756 0.86 0.494 n y n ruditapes_s39681 3.148 0.756 0.086 0.271 n y n ruditapes_c22948 -2.224 0.756 0.47 0.211 n y n ruditapes_c8628 4.497 0.756 0.043 0.194 n y n ruditapes_lrc39094 -2.594 0.756 mitochondrial atp synthase lipid binding protein precursor /// 0044425 // membrane part /// 0006810 // transport 0.359 0.139 n y n ruditapes_c21432 ? 0.756 0 0.097 n y n ruditapes_c24132 ? 0.756 0 0.097 n y n ruditapes_c30797 ? 0.756 0 0.097 n y n ruditapes_c5342 ? 0.756 0 0.097 n y n ruditapes_s40004 ? 0.756 DEC-3 [Lymnaea stagnalis] 0 0.097 n y n ruditapes_c28532 ? 0.756 terribly reduced optic isoform f 0 0.096 n y n ruditapes_c5875 ? 0.756 0 0.096 n y n ruditapes_c12547 -3.336 0.756 0.259 0.078 n y n ruditapes_c20874 -3.336 0.756 0.258 0.077 n y n ruditapes_c6508 -3.336 0.756 0.258 0.077 n y n ruditapes2_c316 -5.559 0.756 0.17 0.031 n y n ruditapes2_c467 -? 0.756 0.097 0 n y n ruditapes_c21406 -? 0.756 0.096 0 n y n ruditapes_s39161 -? 0.756 0.096 0 n y n ruditapes2_c2706 1.076 0.757 28.517 30.696 n n n ruditapes2_c1286 1.161 0.757 7.314 8.489 n n n ruditapes_c13546 -1.204 0.757 6.559 5.448 n n n ruditapes_c29446 1.237 0.757 3.584 4.432 n n n ruditapes_c10145 -1.244 0.757 4.774 3.836 n n n ruditapes2_lrc4857 -1.317 0.757 3.071 2.332 n n n ruditapes_c3800 -1.322 0.757 hypothetical protein BRAFLDRAFT_240135 [Branchiostoma floridae] 2.981 2.255 n n n ruditapes_c9246 -1.363 0.757 2.441 1.791 n n n ruditapes_c9006 1.427 0.757 1.232 1.757 n n n ruditapes_c22719 -1.43 0.757 1.871 1.309 n n n ruditapes_c17071 -1.47 0.757 1.635 1.112 n n n ruditapes_c12756 1.63 0.757 multidrug resistance protein family member (mrp-1) /// 0005524 // ATP binding /// 0015722 // canalicular bile acid transport /// 0014070 // response to organic cyclic substance /// 0008559 // xenobiotic-transporting ATPase activity /// 0015432 // bile acid-exporting ATPase activity /// 0032496 // response to lipopolysaccharide /// 0016323 // basolateral plasma membrane /// 0032355 // response to estradiol stimulus /// 0006855 // multidrug transport /// 0005887 // integral to plasma membrane /// 0010243 // response to organic nitrogen 0.62 1.01 n y n ruditapes_c16599 -1.54 0.757 1.328 0.862 n y n ruditapes_c21597 -1.54 0.757 1.325 0.861 n y n ruditapes_c12653 1.799 0.757 prion protein interacting protein /// 0005515 // protein binding /// 0044464 // cell part 0.412 0.741 n y n ruditapes_s38970 1.889 0.757 0.344 0.649 n y n ruditapes_c17935 1.949 0.757 0.309 0.602 n y n ruditapes2_lrc3289 1.979 0.757 atpase mitochondrial 0.293 0.58 n y n ruditapes_s38313 2.099 0.757 hdig domain protein 0.242 0.508 n y n ruditapes_c9485 2.099 0.757 0.242 0.507 n y n ruditapes_c20096 -1.89 0.757 0.674 0.357 n y n ruditapes_c23424 2.698 0.757 0.122 0.328 n y n ruditapes_c12390 3.148 0.757 0.086 0.269 n y n ruditapes_c30039 -2.224 0.757 0.466 0.21 n y n ruditapes2_lrc4070 ? 0.757 0 0.096 n y n ruditapes_c31132 ? 0.757 0 0.096 n y n ruditapes_c31443 ? 0.757 acidic chitinase precursor "/// 0005488 // binding /// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0005976 // polysaccharide metabolic process" 0 0.096 n y n ruditapes_lrc35144 ? 0.757 protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity 0 0.096 n y n ruditapes_c30600 -4.448 0.757 0.197 0.044 n y n ruditapes_s38838 -4.448 0.757 0.197 0.044 n y n ruditapes2_c2033 -? 0.757 0.096 0 n y n ruditapes_c17276 -? 0.757 0.096 0 n y n ruditapes_c22836 -? 0.757 0.096 0 n y n ruditapes_c23482 -? 0.757 0.096 0 n y n ruditapes_c26388 -? 0.757 0.096 0 n y n ruditapes_c21666 1.12 0.758 12.411 13.902 n n n ruditapes_c12807 1.164 0.758 7.045 8.198 n n n ruditapes_c16070 -1.173 0.758 8.77 7.475 n n n ruditapes2_lrc4461 -1.224 0.758 translationally controlled tumor protein 5.531 4.52 n n n ruditapes2_c2642 1.237 0.758 heat shock protein gp96 /// 0005524 // ATP binding /// 0048471 // perinuclear region of cytoplasm /// 0005789 // endoplasmic reticulum membrane /// 0006916 // anti-apoptosis /// 0050750 // low-density lipoprotein receptor binding /// 0001666 // response to hypoxia /// 0042470 // melanosome /// 0046790 // virion binding /// 0005829 // cytosol /// 0044459 // plasma membrane part /// 0003723 // RNA binding /// 0005792 // microsome /// 0005509 // calcium ion binding /// 0016529 // sarcoplasmic reticulum /// 0051082 // unfolded protein binding /// 0005788 // endoplasmic reticulum lumen /// 0006457 // protein folding 3.573 4.418 n n n ruditapes_lrc38994 -1.233 0.758 protein 5.167 4.192 n n n ruditapes_c10862 1.262 0.758 2.963 3.738 n n n ruditapes_c94 -1.261 0.758 4.224 3.351 n n n ruditapes_c27575 -1.275 0.758 3.853 3.022 n n n ruditapes_c12224 -1.293 0.758 3.449 2.668 n n n ruditapes_c22207 1.327 0.758 1.982 2.629 n n n ruditapes_c16233 -1.323 0.758 2.931 2.215 n n n ruditapes2_lrc5373 -1.352 0.758 kda midgut partial 2.551 1.887 n n n ruditapes_c17186 -1.368 0.758 leucine zipper-ef-hand-containing transmembrane protein mitochondrial precursor 2.365 1.728 n n n ruditapes_c8987 1.428 0.758 isocitrate dehydrogenase 1 /// 0044237 // cellular metabolic process /// 0016491 // oxidoreductase activity 1.207 1.725 n n n ruditapes_lrc32168 1.549 0.758 cyclophilin a /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.777 1.203 n y n ruditapes_c20928 1.606 0.758 acetyl-coenzyme a acyltransferase 1 /// 0016740 // transferase activity /// 0008152 // metabolic process 0.656 1.054 n y n ruditapes_c2820 1.686 0.758 0.527 0.889 n y n ruditapes_c27226 1.709 0.758 0.499 0.853 n y n ruditapes_c26162 -1.601 0.758 dynein heavy chain 1.124 0.702 n y n ruditapes_c9570 1.949 0.758 0.306 0.596 n y n ruditapes_c16670 1.949 0.758 dehydrogenase reductase (sdr family) member 10 "/// 0006629 // lipid metabolic process /// 0005737 // cytoplasm /// 0005506 // iron ion binding /// 0033764 // steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" 0.306 0.595 n y n ruditapes_lrc24939 -1.668 0.758 0.975 0.585 n y n ruditapes_c12497 -1.668 0.758 protein phosphatase regulatory subunit delta isoform /// 0004722 // protein serine/threonine phosphatase activity /// 0008195 // phosphatidate phosphatase activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0006470 // protein amino acid dephosphorylation /// 0000159 // protein phosphatase type 2A complex /// 0005829 // cytosol /// 0008601 // protein phosphatase type 2A regulator activity 0.973 0.584 n y n ruditapes2_lrc5537 2.024 0.758 0.27 0.547 n y n ruditapes_c31942 2.024 0.758 0.269 0.544 n y n ruditapes_c12908 2.099 0.758 0.241 0.505 n y n ruditapes_c30955 -1.73 0.758 0.859 0.497 n y n ruditapes_lrc11814 -1.747 0.758 0.839 0.48 n y n ruditapes_c23502 -1.756 0.758 hypothetical transporter 0.824 0.469 n y n ruditapes2_c3129 -1.779 0.758 sarcoplasmic calcium-binding protein 0.793 0.446 n y n ruditapes_c22343 -2.224 0.758 0.462 0.208 n y n ruditapes_c14909 -2.965 0.758 cub and sushi multiple domains 3 0.292 0.098 n y n ruditapes_c15716 ? 0.758 0 0.095 n y n ruditapes_c21512 ? 0.758 0 0.095 n y n ruditapes_c21872 ? 0.758 0 0.095 n y n ruditapes_c22624 ? 0.758 0 0.095 n y n ruditapes_c25794 ? 0.758 0 0.095 n y n ruditapes_c2902 ? 0.758 non-smc element mms21 homolog 0 0.095 n y n ruditapes_c30363 ? 0.758 0 0.095 n y n ruditapes_c30940 ? 0.758 0 0.095 n y n ruditapes_c19255 -3.336 0.758 0.253 0.076 n y n ruditapes_c19751 -3.336 0.758 0.253 0.076 n y n ruditapes_c28955 -? 0.758 0.095 0 n y n ruditapes_lrc20728 -? 0.758 0.095 0 n y n ruditapes2_c1120 1.076 0.759 28.204 30.357 n n n ruditapes_c24251 -1.179 0.759 dna replication licensing factor mcm5 /// 0043066 // negative regulation of apoptosis /// 0000785 // chromatin /// 0030174 // regulation of DNA replication initiation /// 0006268 // DNA unwinding during replication /// 0016887 // ATPase activity /// 0006350 // transcription /// 0000278 // mitotic cell cycle /// 0000166 // nucleotide binding /// 0042555 // MCM complex /// 0003682 // chromatin binding 8.203 6.957 n n n ruditapes2_c5845 -1.195 0.759 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 7.042 5.895 n n n ruditapes_c22423 1.241 0.759 3.424 4.25 n n n ruditapes_c21987 -1.261 0.759 4.171 3.308 n n n ruditapes_c2151 -1.345 0.759 2.609 1.94 n n n ruditapes_c19631 1.396 0.759 1.385 1.934 n n n ruditapes_c13600 -1.35 0.759 hypothetical protein BRAFLDRAFT_90877 [Branchiostoma floridae] 2.557 1.894 n n n ruditapes_c30351 1.408 0.759 glycoside hydrolase family 10 /// 0003824 // catalytic activity 1.311 1.845 n n n ruditapes_c10033 -1.38 0.759 2.238 1.621 n n n ruditapes2_lrc3695 1.449 0.759 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 1.108 1.606 n n n ruditapes_c24046 -1.404 0.759 2.023 1.44 n n n ruditapes_c14621 1.513 0.759 n-acylethanolamine-hydrolyzing acid amidase /// 0005737 // cytoplasm 0.87 1.316 n y n ruditapes_c8088 1.542 0.759 0.79 1.217 n y n ruditapes_c23259 1.619 0.759 gelsolin /// 0003779 // actin binding 0.625 1.011 n y n ruditapes_c7699 -1.529 0.759 1.348 0.882 n y n ruditapes_c9691 -1.547 0.759 1.281 0.828 n y n ruditapes_c25752 1.799 0.759 0.403 0.725 n y n ruditapes_c28646 -1.606 0.759 1.105 0.688 n y n ruditapes_c24137 -1.668 0.759 0.967 0.58 n y n ruditapes_c29792 -1.668 0.759 0.964 0.578 n y n ruditapes_lrc32879 -1.69 0.759 predicted protein [Nematostella vectensis] 0.925 0.547 n y n ruditapes_c17131 -2.78 0.759 0.317 0.114 n y n ruditapes2_c2756 ? 0.759 c1q and tumor necrosis factor related protein 3 0 0.094 n y n ruditapes2_lrc5260 ? 0.759 0 0.094 n y n ruditapes_c14878 ? 0.759 0 0.094 n y n ruditapes_c16085 ? 0.759 hemagglutinin amebocyte aggregation factor precursor 0 0.094 n y n ruditapes_c26556 ? 0.759 0 0.094 n y n ruditapes_c27157 ? 0.759 0 0.094 n y n ruditapes_c27601 ? 0.759 0 0.094 n y n ruditapes_c32205 ? 0.759 cysteine rich bmp regulator 2 (chordin like) 0 0.094 n y n ruditapes_c6476 ? 0.759 0 0.094 n y n ruditapes_lrc34505 ? 0.759 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum 0 0.094 n y n ruditapes_c17638 -3.336 0.759 PREDICTED: hypothetical protein [Danio rerio] 0.251 0.075 n y n ruditapes2_lrc2055 -? 0.759 0.094 0 n y n ruditapes_c23221 -? 0.759 wsc domain-containing protein /// 0005975 // carbohydrate metabolic process /// 0009987 // cellular process 0.094 0 n y n ruditapes_c24472 -? 0.759 0.094 0 n y n ruditapes_c25479 -? 0.759 0.094 0 n y n ruditapes_c26633 -? 0.759 0.094 0 n y n ruditapes_s38103 -? 0.759 0.094 0 n y n ruditapes_lrc6910 -1.102 0.76 24.13 21.906 n n n ruditapes_c12655 1.136 0.76 9.732 11.052 n n n ruditapes_c13039 -1.225 0.76 5.388 4.399 n n n ruditapes2_c3515 1.259 0.76 selenium binding protein 1 /// 0015031 // protein transport /// 0005634 // nucleus /// 0016020 // membrane /// 0008430 // selenium binding /// 0005737 // cytoplasm 2.953 3.718 n n n ruditapes_c6406 -1.251 0.76 4.425 3.538 n n n ruditapes_c9486 1.313 0.76 2.103 2.761 n n n ruditapes_lrc34830 1.401 0.76 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 1.34 1.878 n n n ruditapes2_c1061 -1.372 0.76 2.283 1.663 n n n ruditapes_c23822 -1.512 0.76 PREDICTED: similar to CG15010-PA [Strongylocentrotus purpuratus] 1.399 0.925 n y n ruditapes_c11472 -1.525 0.76 1.342 0.88 n y n ruditapes_c12377 -1.606 0.76 nucleoporin 214kda /// 0006611 // protein export from nucleus /// 0005215 // transporter activity /// 0005634 // nucleus /// 0005515 // protein binding /// 0005829 // cytosol 1.091 0.679 n y n ruditapes_lrc34430 1.979 0.76 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.286 0.566 n y n ruditapes_c27816 2.248 0.76 0.192 0.432 n y n ruditapes_c19394 -1.946 0.76 0.61 0.314 n y n ruditapes2_c2719 -2.001 0.76 0.569 0.284 n y n ruditapes_c28359 -2.224 0.76 0.455 0.205 n y n ruditapes_s40290 -2.224 0.76 0.453 0.204 n y n ruditapes_c5104 -2.669 0.76 0.333 0.125 n y n ruditapes_c11714 ? 0.76 0 0.093 n y n ruditapes_c7256 ? 0.76 loc100144955 protein 0 0.093 n y n ruditapes_lrc38828 -3.336 0.76 0.25 0.075 n y n ruditapes_c25714 -? 0.76 0.094 0 n y n ruditapes_c29412 -? 0.76 0.094 0 n y n ruditapes_s37478 -? 0.76 0.094 0 n y n ruditapes_c29394 -? 0.76 0.093 0 n y n ruditapes_c9092 -? 0.76 0.093 0 n y n ruditapes_c32323 -1.106 0.761 isocitrate dehydrogenase 2 (nadp+) mitochondrial /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0030145 // manganese ion binding /// 0006099 // tricarboxylic acid cycle /// 0004450 // isocitrate dehydrogenase (NADP+) activity /// 0006097 // glyoxylate cycle /// 0000287 // magnesium ion binding /// 0006102 // isocitrate metabolic process 21.758 19.664 n n n ruditapes2_c2114 1.106 0.761 15.363 16.987 n n n ruditapes_c12909 1.149 0.761 8.147 9.363 n n n ruditapes_c25789 -1.175 0.761 8.455 7.197 n n n ruditapes_c9492 -1.178 0.761 prefoldin subunit 2 /// 0016272 // prefoldin complex /// 0051082 // unfolded protein binding /// 0006457 // protein folding 8.12 6.89 n n n ruditapes_c13078 1.219 0.761 4.013 4.893 n n n ruditapes_c16115 -1.263 0.761 4.052 3.208 n n n ruditapes2_c2754 1.285 0.761 2.479 3.185 n n n ruditapes_c25217 -1.291 0.761 3.401 2.634 n n n ruditapes_c17354 1.553 0.761 c-type mbl-2 protein 0.749 1.164 n y n ruditapes_c16225 1.606 0.761 0.64 1.028 n y n ruditapes_c26461 1.799 0.761 prp4 pre-mrna processing factor 4 homolog /// 0008380 // RNA splicing /// 0005634 // nucleus /// 0006397 // mRNA processing 0.397 0.714 n y n ruditapes_c22835 -1.819 0.761 0.722 0.397 n y n ruditapes_c16752 -1.819 0.761 thiopurine s-methyltransferase /// 0044237 // cellular metabolic process /// 0008168 // methyltransferase activity /// 0044238 // primary metabolic process 0.719 0.395 n y n ruditapes_c22023 2.473 0.761 0.146 0.36 n y n ruditapes_c9943 -1.882 0.761 0.66 0.351 n y n ruditapes_c9296 -1.946 0.761 0.605 0.311 n y n ruditapes_c15232 -1.946 0.761 0.602 0.309 n y n ruditapes_c9526 -2.224 0.761 dynein light chain cytoplasmic /// 0030286 // dynein complex /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 0.449 0.202 n y n ruditapes_c7884 -2.541 0.761 0.353 0.139 n y n ruditapes_c21250 -2.965 0.761 0.285 0.096 n y n ruditapes2_c2817 ? 0.761 x-linked inhibitor of apoptosis 0 0.093 n y n ruditapes_c11149 ? 0.761 0 0.093 n y n ruditapes_c26228 ? 0.761 0 0.093 n y n ruditapes_c4131 ? 0.761 0 0.093 n y n ruditapes_c8711 ? 0.761 epididymal secretory protein e1 precursor 0 0.093 n y n ruditapes_c9538 ? 0.761 0 0.093 n y n ruditapes_c9808 ? 0.761 0 0.093 n y n ruditapes_c20682 ? 0.761 0 0.092 n y n ruditapes_c26104 ? 0.761 0 0.092 n y n ruditapes_c5289 ? 0.761 0 0.092 n y n ruditapes_c9528 ? 0.761 0 0.092 n y n ruditapes_s37327 ? 0.761 0 0.092 n y n ruditapes_lrc36405 -3.336 0.761 thioester-containing protein 0.248 0.074 n y n ruditapes_lrc35931 -3.336 0.761 cytochrome c oxidase subunit mitochondrial precursor 0.247 0.074 n y n ruditapes_lrc27016 -4.448 0.761 0.19 0.043 n y n ruditapes_c15081 -? 0.761 0.093 0 n y n ruditapes_c19989 -? 0.761 0.093 0 n y n ruditapes_c26812 -? 0.761 0.093 0 n y n ruditapes_lrc36687 -? 0.761 0.093 0 n y n ruditapes_c26817 -1.162 0.762 9.653 8.31 n n n ruditapes_c7592 -1.258 0.762 4.154 3.303 n n n ruditapes_c19830 -1.271 0.762 3.835 3.018 n n n ruditapes2_c105 -1.37 0.762 mitochondrial ribosomal protein l36 2.265 1.653 n n n ruditapes_c13756 1.574 0.762 0.694 1.092 n y n ruditapes_c21529 -1.557 0.762 1.209 0.777 n y n ruditapes_c9806 -1.57 0.762 calmodulin /// 0005516 // calmodulin binding /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0051592 // response to calcium ion /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0030425 // dendrite /// 0007052 // mitotic spindle organization 1.171 0.746 n y n ruditapes_s39491 1.799 0.762 0.394 0.709 n y n ruditapes2_c5528 -1.747 0.762 mitochondrial 50s ribosomal protein 0.808 0.463 n y n ruditapes_c16786 -1.779 0.762 0.762 0.428 n y n ruditapes2_lrc5747 2.248 0.762 metallothionein 0.188 0.424 n y n ruditapes_c14966 2.248 0.762 hypothetical protein BRAFLDRAFT_118619 [Branchiostoma floridae] 0.188 0.423 n y n ruditapes_c28449 -1.831 0.762 0.706 0.385 n y n ruditapes_c588 -1.894 0.762 0.642 0.339 n y n ruditapes_c19362 3.148 0.762 17-beta-hydroxysteroid dehydrogenase 14 /// 0055114 // oxidation reduction /// 0004303 // estradiol 17-beta-dehydrogenase activity /// 0005829 // cytosol /// 0006706 // steroid catabolic process /// 0005506 // iron ion binding /// 0047045 // testosterone 17-beta-dehydrogenase (NADP+) activity 0.082 0.257 n y n ruditapes2_c171 3.373 0.762 0.071 0.239 n y n ruditapes2_c3934 3.597 0.762 0.062 0.224 n y n ruditapes_c10906 -2.669 0.762 0.325 0.122 n y n ruditapes_c24081 ? 0.762 0 0.092 n y n ruditapes_c25141 ? 0.762 0 0.092 n y n ruditapes_c26474 ? 0.762 0 0.092 n y n ruditapes_c28698 ? 0.762 0 0.092 n y n ruditapes_c4156 ? 0.762 0 0.092 n y n ruditapes_c1045 ? 0.762 fc low affinity alpha polypeptide /// 0044425 // membrane part /// 0048518 // positive regulation of biological process 0 0.091 n y n ruditapes_c21131 ? 0.762 0 0.091 n y n ruditapes_lrc25632 ? 0.762 0 0.091 n y n ruditapes_c26012 -3.336 0.762 0.246 0.074 n y n ruditapes_c8203 -3.336 0.762 alanine-glyoxylate aminotransferase /// 0008483 // transaminase activity 0.245 0.073 n y n ruditapes_lrc39855 -3.336 0.762 0.245 0.073 n y n ruditapes2_c1034 -4.448 0.762 vitelline membrane outer layer 1 homolog 0.188 0.042 n y n ruditapes_c13752 -4.448 0.762 0.188 0.042 n y n ruditapes_c12068 -1.149 0.763 11.181 9.731 n n n ruditapes_c9072 -1.151 0.763 10.987 9.549 n n n ruditapes_c10386 1.174 0.763 6.059 7.111 n n n ruditapes_c7229 -1.179 0.763 7.949 6.744 n n n ruditapes_c613 -1.235 0.763 defender against cell death 1 /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0042493 // response to drug /// 0007584 // response to nutrient /// 0006916 // anti-apoptosis /// 0001824 // blastocyst development /// 0016021 // integral to membrane /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity 4.836 3.914 n n n ruditapes_c2656 -1.253 0.763 4.254 3.394 n n n ruditapes_c13399 -1.352 0.763 2.444 1.808 n n n ruditapes_c28011 -1.39 0.763 2.073 1.492 n n n ruditapes_c18767 -1.512 0.763 1.355 0.896 n y n ruditapes_c13508 1.709 0.763 0.478 0.817 n y n ruditapes_c8485 1.799 0.763 0.39 0.701 n y n ruditapes_c28314 -1.631 0.763 1.004 0.616 n y n ruditapes_c16882 -1.668 0.763 0.93 0.558 n y n ruditapes_c22490 -1.747 0.763 epididymal secretory protein e1 precursor 0.8 0.458 n y n ruditapes_c28958 -1.779 0.763 0.758 0.426 n y n ruditapes_c16351 -1.779 0.763 0.756 0.425 n y n ruditapes2_lrc5718 3.148 0.763 kallikrein plasma (fletcher factor) 1 /// 0003824 // catalytic activity /// 0009611 // response to wounding 0.081 0.255 n y n ruditapes_c10161 -2.224 0.763 axonemal dynein heavy chain 7 /// 0005524 // ATP binding /// 0005929 // cilium /// 0030286 // dynein complex /// 0007242 // intracellular signaling cascade /// 0019941 // modification-dependent protein catabolic process /// 0016887 // ATPase activity /// 0046872 // metal ion binding /// 0006801 // superoxide metabolic process /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 0.444 0.2 n y n ruditapes_c27396 -2.224 0.763 0.443 0.199 n y n ruditapes_c34461 -2.224 0.763 0.443 0.199 n y n ruditapes_s36008 -2.224 0.763 0.443 0.199 n y n ruditapes_c24385 4.047 0.763 0.049 0.198 n y n ruditapes2_c225 5.396 0.763 "PREDICTED: similar to somatostatin receptor, putative [Hydra magnipapillata]" 0.03 0.162 n y n ruditapes_lrc35773 -2.78 0.763 0.305 0.11 n y n ruditapes_c14573 ? 0.763 unknow protein 0 0.091 n y n ruditapes_c15422 ? 0.763 0 0.091 n y n ruditapes_c21407 ? 0.763 0 0.091 n y n ruditapes_c27100 ? 0.763 0 0.091 n y n ruditapes_c27911 ? 0.763 0 0.091 n y n ruditapes_c9003 ? 0.763 apical endosomal glycoprotein 0 0.091 n y n ruditapes_lrc26991 ? 0.763 0 0.091 n y n ruditapes_lrc33456 ? 0.763 signal transduction protein with efhand domain 0 0.091 n y n ruditapes_s36294 -3.336 0.763 0.242 0.073 n y n ruditapes2_c2415 -? 0.763 cg15786 cg15786-pa 0.091 0 n y n ruditapes2_c2644 -? 0.763 0.091 0 n y n ruditapes_c19563 -? 0.763 0.091 0 n y n ruditapes_c19695 -? 0.763 0.091 0 n y n ruditapes2_c2329 -1.141 0.764 12.231 10.718 n n n ruditapes_c12451 1.183 0.764 5.432 6.427 n n n ruditapes_c30683 -1.183 0.764 7.57 6.401 n n n ruditapes_lrc13725 1.187 0.764 5.211 6.188 n n n ruditapes_c31944 -1.235 0.764 4.794 3.88 n n n ruditapes_c28540 1.247 0.764 3.108 3.876 n n n ruditapes_c4044 -1.261 0.764 cathepsin l 4.005 3.177 n n n ruditapes_c31037 1.301 0.764 2.178 2.833 n n n ruditapes_c16265 -1.281 0.764 3.517 2.745 n n n ruditapes_c10971 -1.304 0.764 iovo_chick ame: full=ovomucoid ame: full=allergen gal d i ame: allergen=gal d 1 flags: precursor 3.08 2.363 n n n ruditapes_c313 1.439 0.764 thioester-containing protein 1.099 1.582 n n n ruditapes_s38891 -1.404 0.764 1.942 1.383 n n n ruditapes_c20210 1.513 0.764 0.839 1.269 n y n ruditapes2_c899 -1.425 0.764 reverse transcriptase 1.789 1.255 n n n ruditapes_c14000 -1.452 0.764 1.632 1.124 n n n ruditapes_c13348 -1.575 0.764 1.14 0.724 n y n ruditapes_lrc29067 1.863 0.764 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 0.34 0.633 n y n ruditapes_c20808 -1.631 0.764 1.002 0.614 n y n ruditapes2_lrc5238 1.889 0.764 calcium binding protein 1 0.322 0.609 n y n ruditapes_c14894 -1.668 0.764 0.922 0.553 n y n ruditapes_c21022 -1.668 0.764 0.922 0.553 n y n ruditapes_c26276 -1.853 0.764 0.666 0.359 n y n ruditapes_c23973 -2.224 0.764 0.437 0.197 n y n ruditapes_c14765 ? 0.764 0 0.09 n y n ruditapes_c21370 ? 0.764 0 0.09 n y n ruditapes_c21656 ? 0.764 0 0.09 n y n ruditapes_c28294 ? 0.764 0 0.09 n y n ruditapes_c28838 ? 0.764 0 0.09 n y n ruditapes_c4174 ? 0.764 0 0.09 n y n ruditapes_s38904 ? 0.764 0 0.09 n y n ruditapes_lrc22487 -3.336 0.764 0.242 0.072 n y n ruditapes_c19916 -3.336 0.764 0.241 0.072 n y n ruditapes_c20389 -3.336 0.764 0.241 0.072 n y n ruditapes2_lrc5286 -? 0.764 0.09 0 n y n ruditapes_c18956 -? 0.764 0.09 0 n y n ruditapes_c20599 -? 0.764 0.09 0 n y n ruditapes_c27322 -? 0.764 0.09 0 n y n ruditapes_c8423 -? 0.764 0.09 0 n y n ruditapes_c16308 1.051 0.765 histone 1 /// 0040007 // growth /// 0002119 // nematode larval development /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0009792 // embryonic development ending in birth or egg hatching /// 0000786 // nucleosome 54.446 57.228 n n n ruditapes_lrc29022 1.156 0.765 7.233 8.358 n n n ruditapes_c10406 1.211 0.765 hypothetical protein BRAFLDRAFT_128123 [Branchiostoma floridae] 4.121 4.992 n n n ruditapes_c9576 -1.211 0.765 5.789 4.781 n n n ruditapes_c18060 -1.303 0.765 3.085 2.368 n n n ruditapes2_c2835 -1.358 0.765 lysosomal-associated protein transmembrane 4 alpha 2.341 1.725 n n n ruditapes_c21234 -1.395 0.765 partial optokinetic response b /// 0030140 // trans-Golgi network transport vesicle /// 0045494 // photoreceptor cell maintenance /// 0016021 // integral to membrane /// 0060041 // retina development in camera-type eye 1.987 1.425 n n n ruditapes_c10834 1.557 0.765 malic enzyme nadp(+)- cytosolic "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0044237 // cellular metabolic process /// 0046872 // metal ion binding /// 0005634 // nucleus /// 0004470 // malic enzyme activity" 0.717 1.117 n y n ruditapes_c29794 -1.483 0.765 1.458 0.984 n n n ruditapes_c11971 -1.547 0.765 1.215 0.785 n y n ruditapes_c35607 1.749 0.765 fatty acid binding protein 4 0.429 0.75 n y n ruditapes_c19656 1.799 0.765 0.385 0.693 n y n ruditapes_c27469 -1.588 0.765 1.09 0.686 n y n ruditapes_c30249 2.698 0.765 0.113 0.305 n y n ruditapes_c16071 -1.946 0.765 p21-activated kinase 0.582 0.299 n y n ruditapes_c23493 3.148 0.765 v-maf musculoaponeurotic fibrosarcoma oncogene homolog k "/// 0045893 // positive regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0046982 // protein heterodimerization activity /// 0005667 // transcription factor complex" 0.08 0.252 n y n ruditapes_c25934 -2.224 0.765 0.435 0.196 n y n ruditapes_c28286 -2.224 0.765 0.433 0.195 n y n ruditapes_c21648 -2.965 0.765 0.276 0.093 n y n ruditapes_c6198 -2.965 0.765 protein 0.274 0.093 n y n ruditapes_c7224 ? 0.765 gm2 activator protein /// 0044444 // cytoplasmic part /// 0046466 // membrane lipid catabolic process /// 0006665 // sphingolipid metabolic process /// 0008047 // enzyme activator activity /// 0050877 // neurological system process 0 0.09 n y n ruditapes2_c679 ? 0.765 0 0.089 n y n ruditapes2_lrc4547 ? 0.765 0 0.089 n y n ruditapes_c21839 ? 0.765 0 0.089 n y n ruditapes_c477 ? 0.765 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0.089 n y n ruditapes_s38268 ? 0.765 0 0.089 n y n ruditapes_c20266 -3.336 0.765 0.239 0.072 n y n ruditapes_s39823 -4.448 0.765 ribosomal protein l8e 0.184 0.041 n y n ruditapes_c10193 -4.448 0.765 0.183 0.041 n y n ruditapes_s38900 -4.448 0.765 0.183 0.041 n y n ruditapes_c311 -6.671 0.765 0.143 0.021 n y n ruditapes_c23277 -? 0.765 0.09 0 n y n ruditapes_c25945 -? 0.765 0.09 0 n y n ruditapes_lrc33642 -? 0.765 methyltransferase type 11 0.089 0 n y n ruditapes_s38306 -? 0.765 developmentally-regulated vdg3 0.089 0 n y n ruditapes_s40474 -? 0.765 0.089 0 n y n ruditapes_c1779 1.084 0.766 22.136 24.005 n n n ruditapes_c1827 1.129 0.766 10.098 11.404 n n n ruditapes_c2383 1.167 0.766 chloroquine resistance marker protein 6.355 7.414 n n n ruditapes_lrc12867 1.17 0.766 cg15828- isoform b 6.1 7.137 n n n ruditapes_c7751 1.217 0.766 3.916 4.765 n n n ruditapes_c20354 -1.321 0.766 2.759 2.088 n n n ruditapes_c11179 -1.361 0.766 2.283 1.677 n n n ruditapes_c10716 -1.365 0.766 2.236 1.639 n n n ruditapes_c25692 1.453 0.766 1.022 1.484 n n n ruditapes_c14704 -1.404 0.766 selenoprotein h 1.902 1.354 n n n ruditapes_c17725 1.529 0.766 0.778 1.189 n y n ruditapes_c22429 -1.512 0.766 1.325 0.876 n y n ruditapes_c10131 -1.512 0.766 1.322 0.875 n y n ruditapes2_c3303 1.676 0.766 peptidoglycan-recognition protein s2 /// 0016787 // hydrolase activity 0.508 0.851 n y n ruditapes2_c2148 -1.639 0.766 0.962 0.587 n y n ruditapes_c25446 -1.668 0.766 0.909 0.545 n y n ruditapes_c22865 -1.668 0.766 0.906 0.543 n y n ruditapes_c13826 -1.819 0.766 0.689 0.379 n y n ruditapes_lrc32919 -1.946 0.766 0.58 0.298 n y n ruditapes_c22486 3.148 0.766 enoyl coenzyme a hydratase peroxisomal /// 0005739 // mitochondrion /// 0046872 // metal ion binding /// 0005515 // protein binding /// 0006631 // fatty acid metabolic process /// 0016853 // isomerase activity 0.079 0.249 n y n ruditapes_c1971 -2.053 0.766 0.509 0.248 n y n ruditapes_c14740 3.148 0.766 0.079 0.248 n y n ruditapes2_c2235 -2.224 0.766 0.43 0.193 n y n ruditapes_c30933 -2.669 0.766 ovary-specific c1q-like factor 0.315 0.118 n y n ruditapes_lrc36306 -2.669 0.766 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0007596 // blood coagulation /// 0016787 // hydrolase activity 0.314 0.118 n y n ruditapes_c10632 ? 0.766 novel carboxylesterase domain containing protein 0 0.089 n y n ruditapes_c24111 ? 0.766 0 0.089 n y n ruditapes_c25064 ? 0.766 0 0.089 n y n ruditapes_c7683 ? 0.766 low density lipoprotein receptor /// 0009987 // cellular process 0 0.089 n y n ruditapes_c8546 ? 0.766 0 0.089 n y n ruditapes_c9895 ? 0.766 0 0.089 n y n ruditapes_lrc30447 ? 0.766 0 0.089 n y n ruditapes2_c2924 ? 0.766 0 0.088 n y n ruditapes_c11993 ? 0.766 0 0.088 n y n ruditapes_c24974 ? 0.766 0 0.088 n y n ruditapes_c28617 ? 0.766 0 0.088 n y n ruditapes_s40014 -3.336 0.766 0.236 0.071 n y n ruditapes2_lrc6849 -4.448 0.766 calmodulin 2 /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0017022 // myosin binding /// 0032465 // regulation of cytokinesis 0.181 0.041 n y n ruditapes_c14545 -? 0.766 0.089 0 n y n ruditapes_c5962 -? 0.766 0.089 0 n y n ruditapes_c7285 -? 0.766 0.089 0 n y n ruditapes2_c2281 -? 0.766 0.088 0 n y n ruditapes_c16695 -1.091 0.767 28.656 26.274 n n n ruditapes_s36180 1.085 0.767 21.453 23.28 n n n ruditapes2_c1694 -1.14 0.767 12.052 10.568 n n n ruditapes2_c997 1.142 0.767 8.409 9.607 n n n ruditapes_c14259 1.15 0.767 7.688 8.839 n n n ruditapes_c7241 1.258 0.767 protein 2.811 3.536 n n n ruditapes_lrc38455 1.325 0.767 1.845 2.445 n n n ruditapes_c11171 1.329 0.767 myosin heavy chain /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0003779 // actin binding /// 0005863 // striated muscle thick filament 1.811 2.406 n n n ruditapes_c9636 1.349 0.767 1.623 2.19 n n n ruditapes_c23357 1.461 0.767 0.98 1.433 n n n ruditapes2_c2414 1.606 0.767 tenascin isoform e 0.608 0.977 n y n ruditapes_c15814 -1.483 0.767 1.435 0.968 n n n ruditapes_c23225 -1.509 0.767 1.322 0.876 n y n ruditapes_lrc15159 1.799 0.767 0.378 0.68 n y n ruditapes_c12795 1.799 0.767 0.376 0.675 n y n ruditapes2_lrc4247 -1.694 0.767 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 0.856 0.505 n y n ruditapes_c21206 2.248 0.767 0.18 0.405 n y n ruditapes_lrc37349 2.248 0.767 spink6 protein 0.179 0.404 n y n ruditapes2_c936 3.148 0.767 zinc- -containing protein /// 0046872 // metal ion binding 0.078 0.246 n y n ruditapes_c17724 3.148 0.767 0.078 0.246 n y n ruditapes_c237 3.148 0.767 heavy chain 1 /// 0001539 // ciliary or flagellar motility /// 0000166 // nucleotide binding /// 0005858 // axonemal dynein complex /// 0003777 // microtubule motor activity 0.078 0.246 n y n ruditapes_c12283 3.148 0.767 0.078 0.245 n y n ruditapes_c22093 3.148 0.767 0.078 0.245 n y n ruditapes_c10372 -2.224 0.767 0.428 0.192 n y n ruditapes_c13683 -2.224 0.767 aldo keto reductase 0.428 0.192 n y n ruditapes2_c1851 ? 0.767 0 0.088 n y n ruditapes2_c3388 ? 0.767 0 0.088 n y n ruditapes2_c5339 ? 0.767 isoform cra_b /// 0043231 // intracellular membrane-bounded organelle /// 0005488 // binding 0 0.088 n y n ruditapes_c14393 ? 0.767 0 0.088 n y n ruditapes_c14789 ? 0.767 0 0.088 n y n ruditapes_c20506 ? 0.767 0 0.088 n y n ruditapes_c28128 ? 0.767 0 0.088 n y n ruditapes_c28819 ? 0.767 0 0.088 n y n ruditapes_c29887 ? 0.767 0 0.088 n y n ruditapes_c3420 ? 0.767 0 0.088 n y n ruditapes_c7426 ? 0.767 0 0.088 n y n ruditapes_c18640 -3.336 0.767 0.235 0.071 n y n ruditapes_c20807 -4.448 0.767 transmembrane 9 superfamily protein member 4 /// 0016021 // integral to membrane 0.18 0.04 n y n ruditapes_c5856 -6.671 0.767 inhibitor of apoptosis protein 0.14 0.021 n y n ruditapes_c14911 -? 0.767 0.088 0 n y n ruditapes_c19013 -? 0.767 0.088 0 n y n ruditapes_c19014 -? 0.767 0.088 0 n y n ruditapes_c31760 -? 0.767 0.088 0 n y n ruditapes_s38434 -? 0.767 developmentally-regulated vdg3 0.088 0 n y n ruditapes_c4555 1.12 0.768 11.428 12.798 n n n ruditapes2_c170 1.127 0.768 calponin transgelin 10.337 11.645 n n n ruditapes_lrc32834 -1.19 0.768 6.789 5.704 n n n ruditapes_c28942 -1.194 0.768 6.552 5.487 n n n ruditapes_c17885 -1.213 0.768 5.534 4.562 n n n ruditapes_c18205 -1.257 0.768 3.957 3.148 n n n ruditapes_c21641 1.277 0.768 2.456 3.136 n n n ruditapes2_c1309 -1.261 0.768 3.879 3.077 n n n ruditapes_c9129 -1.271 0.768 3.614 2.844 n n n ruditapes_c17359 1.314 0.768 calcium calmodulin-dependent serine protein kinase membrane-associated guanylate kinase /// 0003700 // transcription factor activity /// 0042127 // regulation of cell proliferation /// 0005624 // membrane fraction /// 0009986 // cell surface /// 0007049 // cell cycle /// 0030165 // PDZ domain binding /// 0005887 // integral to plasma membrane /// 0007165 // signal transduction /// 0001558 // regulation of cell growth /// 0003702 // RNA polymerase II transcription factor activity /// 0004385 // guanylate kinase activity 1.937 2.547 n n n ruditapes_c4250 -1.302 0.768 2.989 2.295 n n n ruditapes_c25759 -1.304 0.768 nucleoside diphosphate kinase homolog 5 (ndk-h 5) (ndp kinase homolog 5) (nm23-h5) (testis-specific nm23 homolog) (inhibitor of p53-induced apoptosis-beta) (ipia-beta) /// 0009201 // ribonucleoside triphosphate biosynthetic process /// 0006916 // anti-apoptosis /// 0016740 // transferase activity /// 0007286 // spermatid development 2.984 2.289 n n n ruditapes_c10975 -1.31 0.768 2.878 2.197 n n n ruditapes_c31466 -1.352 0.768 2.332 1.725 n n n ruditapes_c21576 1.453 0.768 1.001 1.454 n n n ruditapes_c24842 -1.39 0.768 1.987 1.43 n n n ruditapes_c3225 -1.39 0.768 1.98 1.424 n n n ruditapes_c15122 -1.459 0.768 1.54 1.055 n n n ruditapes_c7758 1.574 0.768 protein 0.664 1.045 n y n ruditapes_c19172 1.649 0.768 0.534 0.88 n y n ruditapes_c5326 1.67 0.768 0.502 0.839 n y n ruditapes_c35938 -1.547 0.768 vitelline membrane outer layer 1 homolog 1.182 0.764 n y n ruditapes_c4790 -1.668 0.768 0.894 0.536 n y n ruditapes_c28938 2.248 0.768 0.179 0.402 n y n ruditapes_c22470 2.473 0.768 protein /// 0048534 // hemopoietic or lymphoid organ development /// 0022008 // neurogenesis /// 0048477 // oogenesis /// 0050794 // regulation of cellular process /// 0009887 // organ morphogenesis 0.137 0.339 n y n ruditapes2_c269 -1.927 0.768 dynein light chain cytoplasmic "/// 0005929 // cilium /// 0005868 // cytoplasmic dynein complex /// 0019861 // flagellum /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 0.584 0.303 n y n ruditapes_c23647 3.148 0.768 ef hand family protein 0.077 0.243 n y n ruditapes_c26439 -2.224 0.768 0.421 0.19 n y n ruditapes_c9154 4.497 0.768 b chain streptavidin-cyclo- k- ph i222 complex 0.039 0.175 n y n ruditapes2_c2156 ? 0.768 0 0.087 n y n ruditapes_c16004 ? 0.768 0 0.087 n y n ruditapes_c21018 ? 0.768 0 0.087 n y n ruditapes_c22590 ? 0.768 0 0.087 n y n ruditapes_s35019 ? 0.768 0 0.087 n y n ruditapes_c10921 -3.336 0.768 0.232 0.07 n y n ruditapes_c5496 -3.336 0.768 0.232 0.07 n y n ruditapes_c19763 -4.448 0.768 0.179 0.04 n y n ruditapes_c6467 -4.448 0.768 0.179 0.04 n y n ruditapes_c31058 -4.448 0.768 0.178 0.04 n y n ruditapes2_lrc6075 -? 0.768 0.087 0 n y n ruditapes_c12580 -? 0.768 0.087 0 n y n ruditapes_c148 -? 0.768 c-type lectin a /// 0005488 // binding 0.087 0 n y n ruditapes_c22281 -? 0.768 0.087 0 n y n ruditapes_c29389 -? 0.768 thaumatin-like protein 0.087 0 n y n ruditapes_lrc14394 -? 0.768 0.087 0 n y n ruditapes_lrc18819 -? 0.768 thrombospondin 1 0.087 0 n y n ruditapes_lrc30509 -? 0.768 0.087 0 n y n ruditapes2_lrc5194 -1.051 0.769 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 94.59 89.981 n n n ruditapes_c15747 -1.3 0.769 cytosolic phosphoenolpyruvate carboxykinase 1 /// 0004611 // phosphoenolpyruvate carboxykinase activity /// 0006094 // gluconeogenesis /// 0032561 // guanyl ribonucleotide binding /// 0044424 // intracellular part /// 0046327 // glycerol biosynthetic process from pyruvate 3.023 2.326 n n n ruditapes_c17364 -1.306 0.769 2.921 2.236 n n n ruditapes_c17402 -1.311 0.769 2.827 2.156 n n n ruditapes_c5556 1.349 0.769 ribosomal protein l7a 1.585 2.139 n n n ruditapes_c24165 1.413 0.769 1.172 1.657 n n n ruditapes2_c2926 1.439 0.769 1.054 1.516 n n n ruditapes_lrc34049 -1.384 0.769 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity /// 0016787 // hydrolase activity 2.007 1.451 n n n ruditapes_c30499 -1.39 0.769 1.957 1.408 n n n ruditapes_c19924 -1.54 0.769 1.198 0.778 n y n ruditapes_lrc9687 -1.701 0.769 0.828 0.487 n y n ruditapes_c19740 -1.711 0.769 isoform a 0.814 0.476 n y n ruditapes_c25324 -1.779 0.769 0.72 0.405 n y n ruditapes_lrc36770 3.148 0.769 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 0.077 0.242 n y n ruditapes_c25036 -2.224 0.769 0.42 0.189 n y n ruditapes_c26045 -2.224 0.769 tata element modulatory factor 1 0.419 0.188 n y n ruditapes_c30250 ? 0.769 hypothetical protein BRAFLDRAFT_96564 [Branchiostoma floridae] 0 0.087 n y n ruditapes_c19665 ? 0.769 0 0.086 n y n ruditapes_c22656 ? 0.769 0 0.086 n y n ruditapes_c22860 ? 0.769 0 0.086 n y n ruditapes_c23078 ? 0.769 0 0.086 n y n ruditapes_c26634 ? 0.769 0 0.086 n y n ruditapes_c9445 ? 0.769 leucine-rich repeat-containing g protein-coupled receptor 4 0 0.086 n y n ruditapes_lrc13745 ? 0.769 cytosolic malate dehydrogenase "/// 0044262 // cellular carbohydrate metabolic process /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0006091 // generation of precursor metabolites and energy /// 0044248 // cellular catabolic process /// 0005829 // cytosol /// 0016615 // malate dehydrogenase activity" 0 0.086 n y n ruditapes_c12304 -3.336 0.769 0.231 0.069 n y n ruditapes_c14762 -3.336 0.769 0.231 0.069 n y n ruditapes_c20851 -3.336 0.769 0.231 0.069 n y n ruditapes_c23175 -3.336 0.769 0.231 0.069 n y n ruditapes_c7289 -3.336 0.769 0.231 0.069 n y n ruditapes2_c4213 -4.448 0.769 0.176 0.04 n y n ruditapes_c39751 -? 0.769 0.087 0 n y n ruditapes_c12883 -? 0.769 0.086 0 n y n ruditapes_c16875 -? 0.769 0.086 0 n y n ruditapes_c20351 -? 0.769 0.086 0 n y n ruditapes_c24899 -? 0.769 0.086 0 n y n ruditapes_c26095 -? 0.769 0.086 0 n y n ruditapes_s38067 -? 0.769 tandem repeat galectin 0.086 0 n y n ruditapes_c32878 -1.105 0.77 20.777 18.803 n n n ruditapes_c27219 -1.142 0.77 11.6 10.161 n n n ruditapes_s40431 -1.179 0.77 beta 2 /// 0005515 // protein binding /// 0009987 // cellular process 7.436 6.306 n n n ruditapes2_c346 -1.181 0.77 growth hormone inducible transmembrane protein /// 0016021 // integral to membrane 7.293 6.173 n n n ruditapes_c2568 -1.21 0.77 5.534 4.572 n n n ruditapes_c4006 -1.232 0.77 4.664 3.787 n n n ruditapes2_lrc4423 -1.253 0.77 3.996 3.188 n n n ruditapes_c3190 1.283 0.77 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 2.314 2.969 n n n ruditapes2_c2724 -1.273 0.77 3.504 2.752 n n n ruditapes_c9096 1.306 0.77 n-acetylneuraminate pyruvate lyase 2.001 2.614 n n n ruditapes_c13032 -1.326 0.77 2.592 1.954 n n n ruditapes_c3751 -1.454 0.77 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 1.534 1.055 n n n ruditapes_c19232 -1.483 0.77 1.392 0.939 n n n ruditapes_c16950 1.799 0.77 0.368 0.662 n y n ruditapes_c13145 -1.779 0.77 hypothetical protein BRAFLDRAFT_87343 [Branchiostoma floridae] 0.713 0.401 n y n ruditapes_c20564 -1.946 0.77 0.559 0.287 n y n ruditapes2_c2364 -1.977 0.77 0.537 0.272 n y n ruditapes_lrc30836 -2.001 0.77 fatty acid binding protein adipocyte /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 0.523 0.261 n y n ruditapes_c10903 3.148 0.77 0.076 0.24 n y n ruditapes_lrc20614 3.148 0.77 0.076 0.239 n y n ruditapes_c27040 3.597 0.77 pancreatic lipase /// 0032501 // multicellular organismal process /// 0016787 // hydrolase activity 0.058 0.207 n y n ruditapes_lrc35100 -2.224 0.77 0.416 0.187 n y n ruditapes_c19867 -2.224 0.77 0.414 0.186 n y n ruditapes_c2578 ? 0.77 0 0.086 n y n ruditapes_c28001 ? 0.77 0 0.086 n y n ruditapes_c4810 ? 0.77 0 0.086 n y n ruditapes_c8305 ? 0.77 0 0.086 n y n ruditapes_lrc32778 ? 0.77 0 0.086 n y n ruditapes_c14266 ? 0.77 hypothetical protein BRAFLDRAFT_118184 [Branchiostoma floridae] 0 0.085 n y n ruditapes_c27716 ? 0.77 0 0.085 n y n ruditapes_c18209 -3.336 0.77 0.229 0.069 n y n ruditapes_c27900 -3.336 0.77 0.229 0.069 n y n ruditapes_lrc37609 -3.336 0.77 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 0.229 0.069 n y n ruditapes_c15885 -3.336 0.77 0.228 0.068 n y n ruditapes_s38898 -4.448 0.77 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.176 0.04 n y n ruditapes_c14998 -? 0.77 0.086 0 n y n ruditapes_c15394 -? 0.77 0.086 0 n y n ruditapes_c20421 -? 0.77 0.086 0 n y n ruditapes_c8870 -? 0.77 0.086 0 n y n ruditapes_lrc38811 -? 0.77 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.086 0 n y n ruditapes_c10819 -? 0.77 0.085 0 n y n ruditapes_s35672 -? 0.77 0.085 0 n y n ruditapes_c12437 -1.144 0.771 11.123 9.721 n n n ruditapes_c30358 -1.264 0.771 3.702 2.93 n n n ruditapes_c1336 -1.273 0.771 ubiquitin specific protease 39 and snrnp assembly factor /// 0006511 // ubiquitin-dependent protein catabolic process /// 0000245 // spliceosome assembly /// 0004221 // ubiquitin thiolesterase activity /// 0005634 // nucleus /// 0005515 // protein binding /// 0008270 // zinc ion binding 3.477 2.73 n n n ruditapes_c20721 1.328 0.771 1.747 2.319 n n n ruditapes_c14286 -1.301 0.771 2.95 2.268 n n n ruditapes_c30186 -1.304 0.771 thioester-containing protein 2.893 2.219 n n n ruditapes_c22848 1.369 0.771 1.414 1.935 n n n ruditapes2_c2302 1.39 0.771 cat eye syndrome chromosome candidate 5 homolog 1.278 1.777 n n n ruditapes2_c436 1.408 0.771 universal stress protein 1.179 1.66 n n n ruditapes_c1301 -1.385 0.771 ganglioside gm2 activator precursor 1.967 1.42 n n n ruditapes_c10853 -1.386 0.771 1.963 1.417 n n n ruditapes_c27867 1.536 0.771 rna pseudouridylate synthase domain containing 1 0.726 1.115 n y n ruditapes_c13289 -1.512 0.771 1.266 0.837 n y n ruditapes_s38911 1.709 0.771 0.447 0.764 n y n ruditapes_c6138 -1.575 0.771 1.065 0.676 n y n ruditapes_c21244 -1.588 0.771 1.031 0.649 n y n ruditapes_c31218 -1.601 0.771 titin 1.008 0.629 n y n ruditapes_s32952 1.911 0.771 0.292 0.557 n y n ruditapes_c12269 -1.668 0.771 0.863 0.518 n y n ruditapes_c2032 -1.711 0.771 hypothetical protein BRAFLDRAFT_117676 [Branchiostoma floridae] 0.799 0.467 n y n ruditapes_lrc33526 -1.779 0.771 0.707 0.397 n y n ruditapes_lrc33710 2.473 0.771 s- glutathione dehydrogenase class iii alcohol dehydrogenase "/// 0006113 // fermentation /// 0008270 // zinc ion binding /// 0004024 // alcohol dehydrogenase activity, zinc-dependent" 0.134 0.332 n y n ruditapes_s37444 -1.946 0.771 0.555 0.285 n y n ruditapes_c7361 3.148 0.771 0.075 0.237 n y n ruditapes_s36718 3.148 0.771 0.075 0.237 n y n ruditapes_c5226 3.597 0.771 0.057 0.206 n y n ruditapes2_c1726 ? 0.771 0 0.085 n y n ruditapes2_c4550 ? 0.771 mitogen-activated protein-binding protein-interacting protein /// 0005515 // protein binding /// 0031902 // late endosome membrane /// 0000186 // activation of MAPKK activity /// 0005765 // lysosomal membrane 0 0.085 n y n ruditapes_c12156 ? 0.771 0 0.085 n y n ruditapes_c13225 ? 0.771 0 0.085 n y n ruditapes_c14712 ? 0.771 0 0.085 n y n ruditapes_c27335 ? 0.771 0 0.085 n y n ruditapes_c29293 ? 0.771 0 0.085 n y n ruditapes_c17148 -3.336 0.771 0.227 0.068 n y n ruditapes_c17158 -3.336 0.771 0.226 0.068 n y n ruditapes_c12614 -4.448 0.771 0.174 0.039 n y n ruditapes_s37207 -4.448 0.771 wsc domain protein 0.174 0.039 n y n ruditapes_lrc33169 -6.671 0.771 chymotrypsinogen 2 /// 0016787 // hydrolase activity 0.135 0.02 n y n ruditapes_c12986 -? 0.771 0.085 0 n y n ruditapes_c18446 -? 0.771 0.085 0 n y n ruditapes_c18497 -? 0.771 0.085 0 n y n ruditapes_c18900 -? 0.771 0.085 0 n y n ruditapes_c21387 -? 0.771 0.085 0 n y n ruditapes_s34464 -? 0.771 0.085 0 n y n ruditapes_s35971 -? 0.771 0.085 0 n y n ruditapes_c24553 -? 0.771 0.084 0 n y n ruditapes_s38638 -? 0.771 sarcoplasmic calcium-binding protein 0.084 0 n y n ruditapes2_c1313 -1.124 0.772 14.589 12.977 n n n ruditapes_c11115 -1.168 0.772 8.285 7.095 n n n ruditapes_c19504 -1.191 0.772 6.483 5.444 n n n ruditapes2_lrc3836 1.23 0.772 mitochondrial ubiquinol cytochrome c reductase complex 3.321 4.086 n n n ruditapes_c15106 1.299 0.772 2.042 2.653 n n n ruditapes2_c1201 -1.295 0.772 3.016 2.329 n n n ruditapes_c24334 1.349 0.772 1.546 2.086 n n n ruditapes2_c2293 -1.32 0.772 2.645 2.004 n n n ruditapes_c3565 1.39 0.772 PREDICTED: similar to AGAP007507-PA [Tribolium castaneum] 1.267 1.761 n n n ruditapes_c4207 -1.344 0.772 2.341 1.743 n n n ruditapes_c18479 -1.354 0.772 2.237 1.653 n n n ruditapes_lrc19885 -1.39 0.772 1.913 1.376 n n n ruditapes_c24463 -1.415 0.772 1.732 1.224 n n n ruditapes_c20708 -1.459 0.772 1.48 1.014 n n n ruditapes_c8045 -1.466 0.772 1.454 0.992 n n n ruditapes_c8314 -1.509 0.772 1.263 0.837 n y n ruditapes_c21057 -1.557 0.772 1.114 0.716 n y n ruditapes2_c2682 1.743 0.772 universal stress protein 0.406 0.708 n y n ruditapes2_lrc3790 -1.57 0.772 1.079 0.687 n y n ruditapes_c30424 1.799 0.772 0.362 0.651 n y n ruditapes_c28762 1.863 0.772 0.317 0.591 n y n ruditapes_c4269 -1.73 0.772 0.766 0.443 n y n ruditapes_lrc25598 -1.882 0.772 0.597 0.317 n y n ruditapes_lrc31748 -1.906 0.772 calmodulin /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0030425 // dendrite /// 0007052 // mitotic spindle organization 0.575 0.302 n y n ruditapes2_c3901 2.698 0.772 cytochrome c oxidase subunit ii /// 0044464 // cell part 0.106 0.286 n y n ruditapes_c24699 -1.946 0.772 0.547 0.281 n y n ruditapes_c23920 -2.224 0.772 0.409 0.184 n y n ruditapes2_lrc5071 ? 0.772 0 0.084 n y n ruditapes_c10775 ? 0.772 0 0.084 n y n ruditapes_c14701 ? 0.772 0 0.084 n y n ruditapes_c35809 ? 0.772 sarcoplasmic calcium-binding protein 0 0.084 n y n ruditapes_c6034 ? 0.772 protein kinase c /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0 0.084 n y n ruditapes_lrc37209 ? 0.772 wsc domain containing protein 0 0.084 n y n ruditapes_c18732 -3.336 0.772 0.225 0.067 n y n ruditapes_lrc33955 -4.448 0.772 hypothetical protein TRIADDRAFT_21490 [Trichoplax adhaerens] 0.173 0.039 n y n ruditapes_c21177 -4.448 0.772 0.172 0.039 n y n ruditapes_c9574 -4.448 0.772 0.172 0.039 n y n ruditapes2_c2037 -? 0.772 0.084 0 n y n ruditapes_c14745 -? 0.772 0.084 0 n y n ruditapes_c15607 -? 0.772 0.084 0 n y n ruditapes_c25608 -? 0.772 0.084 0 n y n ruditapes_c5968 -? 0.772 "PREDICTED: similar to otoferlin, partial [Hydra magnipapillata]" 0.084 0 n y n ruditapes_c7619 -? 0.772 0.084 0 n y n ruditapes_c9404 -? 0.772 0.084 0 n y n ruditapes2_c1902 1.079 0.773 23.2 25.038 n n n ruditapes_c20962 -1.154 0.773 9.626 8.344 n n n ruditapes_c470 -1.174 0.773 7.628 6.497 n n n ruditapes_c4420 1.178 0.773 5.298 6.24 n n n ruditapes_c10013 1.185 0.773 4.895 5.8 n n n ruditapes_c26074 1.212 0.773 3.818 4.629 n n n ruditapes_c25625 1.293 0.773 eukaryotic translation initiation factor 5 /// 0006446 // regulation of translational initiation /// 0005488 // binding /// 0003924 // GTPase activity /// 0005737 // cytoplasm 2.105 2.721 n n n ruditapes_c19616 1.328 0.773 1.728 2.294 n n n ruditapes2_c2831 1.392 0.773 1.245 1.733 n n n ruditapes_c16104 1.424 0.773 bcl2-associated athanogene 4 /// 0005634 // nucleus /// 0006915 // apoptosis /// 0005737 // cytoplasm /// 0051291 // protein heterooligomerization 1.084 1.543 n n n ruditapes_c24795 -1.38 0.773 1.967 1.425 n n n ruditapes_c8598 -1.394 0.773 lactase-phlorizin hydrolase "/// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds /// 0016020 // membrane" 1.856 1.331 n n n ruditapes2_c209 -1.439 0.773 PREDICTED: hypothetical protein [Hydra magnipapillata] 1.57 1.091 n n n ruditapes_s37731 1.709 0.773 0.437 0.746 n y n ruditapes2_lrc3483 -1.623 0.773 0.935 0.576 n y n ruditapes_c27666 1.949 0.773 0.268 0.521 n y n ruditapes_c21342 2.248 0.773 hypothetical protein BRAFLDRAFT_117369 [Branchiostoma floridae] 0.171 0.385 n y n ruditapes2_c207 -1.831 0.773 0.636 0.347 n y n ruditapes_c15777 2.698 0.773 tyrosine-protein kinase drl 0.105 0.283 n y n ruditapes_lrc36514 -1.946 0.773 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0005739 // mitochondrion /// 0016020 // membrane /// 0009987 // cellular process 0.543 0.279 n y n ruditapes2_c2968 -1.977 0.773 eukaryotic translation initiation factor 2 alpha kinase 4 /// 0006446 // regulation of translational initiation /// 0005488 // binding /// 0033554 // cellular response to stress /// 0007154 // cell communication /// 0016740 // transferase activity 0.521 0.264 n y n ruditapes_c16883 -2.022 0.773 0.495 0.245 n y n ruditapes_c8773 3.597 0.773 protein 0.056 0.203 n y n ruditapes_c5272 -2.224 0.773 0.405 0.182 n y n ruditapes_lrc12464 -2.224 0.773 0.405 0.182 n y n ruditapes_c18230 -2.224 0.773 heat shock 70kda protein 12a 0.404 0.182 n y n ruditapes_s39866 ? 0.773 0 0.084 n y n ruditapes_c13062 ? 0.773 0 0.083 n y n ruditapes_c17311 ? 0.773 high incidence of males (increased x chromosome loss) family member (him-4) /// 0005488 // binding /// 0009987 // cellular process 0 0.083 n y n ruditapes_c26170 ? 0.773 0 0.083 n y n ruditapes_lrc28729 ? 0.773 0 0.083 n y n ruditapes_c5891 -3.336 0.773 0.223 0.067 n y n ruditapes_c9379 -3.336 0.773 0.223 0.067 n y n ruditapes_c26598 -3.336 0.773 0.222 0.067 n y n ruditapes_s37644 -? 0.773 fkbp-type peptidyl-prolyl /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.084 0 n y n ruditapes_c10803 -? 0.773 0.083 0 n y n ruditapes_c18684 -? 0.773 0.083 0 n y n ruditapes_c20723 -? 0.773 0.083 0 n y n ruditapes_c21123 -? 0.773 0.083 0 n y n ruditapes_c21399 -? 0.773 0.083 0 n y n ruditapes_c24422 -? 0.773 0.083 0 n y n ruditapes_c2897 -? 0.773 zygote arrest 1 0.083 0 n y n ruditapes_c8798 -? 0.773 0.083 0 n y n ruditapes_lrc32632 -? 0.773 0.083 0 n y n ruditapes_s36813 -? 0.773 0.083 0 n y n ruditapes_c1679 -1.108 0.774 18.763 16.931 n n n ruditapes_c1579 -1.12 0.774 15.413 13.764 n n n ruditapes_c12800 1.155 0.774 6.761 7.81 n n n ruditapes_c17132 -1.189 0.774 6.467 5.437 n n n ruditapes_c11329 1.203 0.774 4.113 4.949 n n n ruditapes_c13554 -1.208 0.774 5.429 4.493 n n n ruditapes_c20837 -1.224 0.774 4.769 3.896 n n n ruditapes_c17763 -1.231 0.774 4.538 3.686 n n n ruditapes_c19712 -1.259 0.774 3.701 2.939 n n n ruditapes_c5373 1.33 0.774 1.68 2.234 n n n ruditapes_c20653 1.376 0.774 1.331 1.83 n n n ruditapes_c23135 1.478 0.774 0.863 1.275 n n n ruditapes_lrc33445 -1.423 0.774 h+ transporting f1 atp synthase epsilon subunit "/// 0000275 // mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism" 1.645 1.156 n n n ruditapes_c20476 -1.435 0.774 1.575 1.098 n n n ruditapes_c26321 -1.483 0.774 1.346 0.908 n n n ruditapes_c8755 1.686 0.774 0.461 0.777 n y n ruditapes_c31274 -1.57 0.774 1.051 0.669 n y n ruditapes_c25195 1.799 0.774 tetratricopeptide repeat domain 38 0.352 0.634 n y n ruditapes_c24491 -1.631 0.774 0.909 0.558 n y n ruditapes_c11537 -1.73 0.774 0.748 0.432 n y n ruditapes_c30619 2.248 0.774 solute carrier family 5 (sodium glucose cotransporter) member 12 0.17 0.382 n y n ruditapes_c23605 2.248 0.774 0.169 0.381 n y n ruditapes_c23290 -1.946 0.774 0.537 0.276 n y n ruditapes_c8317 -2.038 0.774 0.482 0.236 n y n ruditapes_c9860 -2.224 0.774 arylacetamide deacetylase-like 1 /// 0016020 // membrane /// 0006470 // protein amino acid dephosphorylation /// 0042301 // phosphate binding /// 0017171 // serine hydrolase activity /// 0006805 // xenobiotic metabolic process 0.4 0.18 n y n ruditapes2_c2379 ? 0.774 0 0.083 n y n ruditapes_c12395 ? 0.774 0 0.083 n y n ruditapes_c15223 ? 0.774 sarcoplasmic calcium-binding protein 0 0.083 n y n ruditapes_c20769 ? 0.774 0 0.083 n y n ruditapes_c21338 ? 0.774 0 0.083 n y n ruditapes2_c2696 ? 0.774 0 0.082 n y n ruditapes2_c3437 ? 0.774 fc low affinity alpha polypeptide /// 0044425 // membrane part /// 0048518 // positive regulation of biological process 0 0.082 n y n ruditapes_c13492 ? 0.774 0 0.082 n y n ruditapes_c13579 ? 0.774 0 0.082 n y n ruditapes_c15606 ? 0.774 0 0.082 n y n ruditapes_c20901 ? 0.774 0 0.082 n y n ruditapes_c27017 ? 0.774 0 0.082 n y n ruditapes_c27909 ? 0.774 amp-dependent synthetase and ligase /// 0003824 // catalytic activity 0 0.082 n y n ruditapes_c29006 ? 0.774 0 0.082 n y n ruditapes_c29386 ? 0.774 0 0.082 n y n ruditapes_c29533 ? 0.774 0 0.082 n y n ruditapes_c31452 ? 0.774 0 0.082 n y n ruditapes_lrc10275 ? 0.774 0 0.082 n y n ruditapes_c12008 -3.336 0.774 0.221 0.066 n y n ruditapes_c13540 -3.336 0.774 0.22 0.066 n y n ruditapes_c7088 -4.448 0.774 sulfatase modifying factor 2 /// 0005488 // binding 0.169 0.038 n y n ruditapes_c31423 -6.671 0.774 0.132 0.02 n y n ruditapes_lrc36921 -6.671 0.774 inhibitor of apoptosis protein 1 0.132 0.02 n y n ruditapes_c4715 -? 0.774 0.083 0 n y n ruditapes_c16930 -? 0.774 0.082 0 n y n ruditapes_c19266 -? 0.774 0.082 0 n y n ruditapes_c29122 -? 0.774 0.082 0 n y n ruditapes_c334 -? 0.774 0.082 0 n y n ruditapes_c38404 -? 0.774 0.082 0 n y n ruditapes_c8382 -? 0.774 0.082 0 n y n ruditapes_s34189 -? 0.774 0.082 0 n y n ruditapes_s40440 -? 0.774 0.082 0 n y n ruditapes_c3970 1.136 0.775 8.563 9.727 n n n ruditapes2_c2367 1.151 0.775 7.048 8.111 n n n ruditapes_lrc32676 -1.158 0.775 metallothionein /// 0046872 // metal ion binding 9.005 7.778 n n n ruditapes2_c1156 1.166 0.775 5.917 6.898 n n n ruditapes_c29321 1.168 0.775 5.763 6.732 n n n ruditapes_c10710 -1.184 0.775 6.788 5.734 n n n ruditapes_c13241 1.226 0.775 phosphoenolpyruvate carboxykinase /// 0004611 // phosphoenolpyruvate carboxykinase activity /// 0017076 // purine nucleotide binding 3.327 4.08 n n n ruditapes_c27073 -1.227 0.775 4.649 3.789 n n n ruditapes_c1801 -1.25 0.775 3.915 3.133 n n n ruditapes_c24819 -1.256 0.775 3.749 2.986 n n n ruditapes_c8747 -1.263 0.775 3.578 2.833 n n n ruditapes_c26397 -1.284 0.775 3.132 2.439 n n n ruditapes_c3128 1.392 0.775 1.228 1.709 n n n ruditapes_c26753 -1.368 0.775 2.036 1.488 n n n ruditapes_c18524 -1.379 0.775 1.939 1.407 n n n ruditapes_c20699 -1.435 0.775 protein /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0043687 // post-translational protein modification /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0000166 // nucleotide binding /// 0016740 // transferase activity /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 1.565 1.091 n n n ruditapes2_c5962 -1.439 0.775 gm2 ganglioside activator protein /// 0032428 // beta-N-acetylgalactosaminidase activity /// 0005739 // mitochondrion /// 0006689 // ganglioside catabolic process /// 0019915 // lipid storage /// 0005889 // hydrogen:potassium-exchanging ATPase complex /// 0016004 // phospholipase activator activity /// 0051345 // positive regulation of hydrolase activity /// 0005764 // lysosome /// 0009898 // internal side of plasma membrane /// 0009313 // oligosaccharide catabolic process /// 0045179 // apical cortex /// 0050885 // neuromuscular process controlling balance /// 0007611 // learning or memory /// 0006869 // lipid transport /// 0005319 // lipid transporter activity /// 0006944 // membrane fusion 1.548 1.076 n n n ruditapes_c15700 -1.483 0.775 dep domain containing 1b 1.33 0.897 n n n ruditapes2_c2709 -1.529 0.775 1.161 0.759 n y n ruditapes_c11304 -1.565 0.775 1.058 0.676 n y n ruditapes_c24694 -1.631 0.775 0.905 0.555 n y n ruditapes2_lrc3525 -1.668 0.775 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.835 0.501 n y n ruditapes_lrc9383 -1.711 0.775 0.767 0.448 n y n ruditapes_c24366 2.248 0.775 ik down-regulator of hla ii /// 0003700 // transcription factor activity /// 0005721 // centromeric heterochromatin /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0030900 // forebrain development /// 0016481 // negative regulation of transcription /// 0005634 // nucleus /// 0048732 // gland development /// 0040018 // positive regulation of multicellular organism growth /// 0005515 // protein binding /// 0007267 // cell-cell signaling /// 0005625 // soluble fraction /// 0005615 // extracellular space /// 0016564 // transcription repressor activity /// 0008270 // zinc ion binding /// 0030097 // hemopoiesis /// 0006955 // immune response 0.167 0.377 n y n ruditapes2_c3029 -1.853 0.775 autotransporter-associated beta strand repeat protein 0.608 0.328 n y n ruditapes_s39031 -1.906 0.775 0.563 0.295 n y n ruditapes_c17303 2.698 0.775 0.103 0.279 n y n ruditapes_c21621 -1.946 0.775 0.536 0.275 n y n ruditapes_s36519 -2.224 0.775 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 0.395 0.178 n y n ruditapes2_lrc6774 -2.669 0.775 glutathione s-transferase 0.292 0.109 n y n ruditapes2_c3344 ? 0.775 0 0.082 n y n ruditapes2_lrc4179 ? 0.775 0 0.082 n y n ruditapes_c16144 ? 0.775 0 0.082 n y n ruditapes_c22644 ? 0.775 0 0.082 n y n ruditapes_lrc33571 ? 0.775 0 0.082 n y n ruditapes_s33035 ? 0.775 0 0.082 n y n ruditapes_c13662 ? 0.775 0 0.081 n y n ruditapes_c28782 ? 0.775 0 0.081 n y n ruditapes_c1952 -3.336 0.775 0.219 0.066 n y n ruditapes_c15145 -4.448 0.775 0.168 0.038 n y n ruditapes_c5309 -4.448 0.775 0.168 0.038 n y n ruditapes2_c5202 -4.448 0.775 predicted protein [Aspergillus terreus NIH2624] 0.167 0.038 n y n ruditapes_c26673 -4.448 0.775 0.167 0.038 n y n ruditapes_lrc18600 -4.448 0.775 eukaryotic translation initiation factor 5a-1 /// 0045948 // positive regulation of translational initiation /// 0006611 // protein export from nucleus /// 0047485 // protein N-terminus binding /// 0008283 // cell proliferation /// 0019079 // viral genome replication /// 0006406 // mRNA export from nucleus /// 0005643 // nuclear pore /// 0017070 // U6 snRNA binding /// 0006917 // induction of apoptosis /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0008612 // peptidyl-lysine modification to hypusine /// 0005642 // annulate lamellae 0.167 0.038 n y n ruditapes_lrc25865 -4.448 0.775 developmentally-regulated vdg3 0.167 0.038 n y n ruditapes2_lrc6853 -? 0.775 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.082 0 n y n ruditapes_c12187 -? 0.775 0.082 0 n y n ruditapes_c15270 -? 0.775 0.082 0 n y n ruditapes_c18855 -? 0.775 0.082 0 n y n ruditapes_c22546 -? 0.775 lectin c-type domain protein 0.082 0 n y n ruditapes_c25703 -? 0.775 0.082 0 n y n ruditapes_c2625 -? 0.775 glutathione s-transferase /// 0005515 // protein binding 0.082 0 n y n ruditapes_c2857 -? 0.775 0.082 0 n y n ruditapes_s36975 -? 0.775 atpase mitochondrial 0.082 0 n y n ruditapes_c19544 -? 0.775 0.081 0 n y n ruditapes_c925 -? 0.775 0.081 0 n y n ruditapes2_lrc7009 1.134 0.776 40s ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development 8.637 9.797 n n n ruditapes2_c1590 1.134 0.776 myeloid lymphoid or mixed-lineage leukemia (trithorax drosophila) translocated 4 /// 0007267 // cell-cell signaling /// 0005911 // cell-cell junction /// 0008022 // protein C-terminus binding /// 0007155 // cell adhesion /// 0007165 // signal transduction 8.608 9.764 n n n ruditapes_c17692 -1.171 0.776 7.655 6.537 n n n ruditapes_c14445 1.254 0.776 2.655 3.33 n n n ruditapes_c21132 1.256 0.776 fumarylacetoacetate hydrolase domain containing 1 /// 0046872 // metal ion binding /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0005743 // mitochondrial inner membrane 2.629 3.303 n n n ruditapes_c26325 -1.259 0.776 3.62 2.874 n n n ruditapes_lrc19129 -1.382 0.776 1.901 1.375 n n n ruditapes_c24533 1.508 0.776 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0.764 1.152 n y n ruditapes_c14106 1.619 0.776 0.539 0.872 n y n ruditapes_c18513 -1.588 0.776 0.992 0.624 n y n ruditapes_c24376 1.889 0.776 0.291 0.549 n y n ruditapes_c12670 -1.631 0.776 0.894 0.548 n y n ruditapes_c24185 -1.668 0.776 0.832 0.499 n y n ruditapes_c3814 -1.668 0.776 0.832 0.499 n y n ruditapes_c11452 -1.711 0.776 0.761 0.445 n y n ruditapes_c20402 2.248 0.776 0.167 0.375 n y n ruditapes2_c2143 2.473 0.776 dysferlin interacting protein 1 0.127 0.315 n y n ruditapes_c2052 2.548 0.776 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0.119 0.303 n y n ruditapes_c11837 -1.946 0.776 0.531 0.273 n y n ruditapes_c11109 -1.977 0.776 0.51 0.258 n y n ruditapes_s37036 -2.224 0.776 epididymal secretory protein e1 precursor /// 0006869 // lipid transport /// 0044424 // intracellular part 0.393 0.177 n y n ruditapes_c20016 -2.224 0.776 0.392 0.176 n y n ruditapes2_c2040 ? 0.776 calmodulin /// 0005982 // starch metabolic process /// 0009909 // regulation of flower development /// 0005634 // nucleus /// 0005515 // protein binding /// 0005509 // calcium ion binding /// 0009612 // response to mechanical stimulus 0 0.081 n y n ruditapes_c18985 ? 0.776 0 0.081 n y n ruditapes_c19900 ? 0.776 0 0.081 n y n ruditapes_c29853 ? 0.776 0 0.081 n y n ruditapes_c31840 ? 0.776 0 0.081 n y n ruditapes_c3486 ? 0.776 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 0 0.081 n y n ruditapes_c9602 -3.336 0.776 0.216 0.065 n y n ruditapes_c25828 -4.448 0.776 0.167 0.037 n y n ruditapes_c7407 -4.448 0.776 0.167 0.037 n y n ruditapes_c14077 -4.448 0.776 0.166 0.037 n y n ruditapes_c21538 -4.448 0.776 0.166 0.037 n y n ruditapes_c26241 -4.448 0.776 0.166 0.037 n y n ruditapes_lrc23189 -4.448 0.776 0.166 0.037 n y n ruditapes_s36532 -4.448 0.776 0.166 0.037 n y n ruditapes2_c4365 -6.671 0.776 sarcoplasmic calcium-binding protein 0.129 0.019 n y n ruditapes2_c4034 -? 0.776 hypothetical protein BRAFLDRAFT_63343 [Branchiostoma floridae] 0.081 0 n y n ruditapes_c10650 -? 0.776 0.081 0 n y n ruditapes_c11331 -? 0.776 0.081 0 n y n ruditapes_c12036 -? 0.776 0.081 0 n y n ruditapes_c13379 -? 0.776 0.081 0 n y n ruditapes_c22554 -? 0.776 0.081 0 n y n ruditapes_c24117 -? 0.776 0.081 0 n y n ruditapes_c9022 -? 0.776 0.081 0 n y n ruditapes_c9318 -? 0.776 0.081 0 n y n ruditapes_lrc32891 -? 0.776 0.081 0 n y n ruditapes_lrc39656 -? 0.776 0.081 0 n y n ruditapes_s40208 -? 0.776 0.081 0 n y n ruditapes_c12766 1.123 0.777 10.1 11.338 n n n ruditapes_c29117 -1.14 0.777 11.104 9.738 n n n ruditapes_c32 -1.172 0.777 nadh dehydrogenase fe-s protein 7 "/// 0055114 // oxidation reduction /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0005506 // iron ion binding" 7.479 6.381 n n n ruditapes_c20249 -1.194 0.777 6.047 5.066 n n n ruditapes_c2859 1.24 0.777 2.943 3.65 n n n ruditapes_c32013 1.244 0.777 2.843 3.536 n n n ruditapes_c8688 1.249 0.777 enhancer of rudimentary homolog /// 0005730 // nucleolus /// 0005515 // protein binding /// 0006213 // pyrimidine nucleoside metabolic process /// 0005737 // cytoplasm /// 0007049 // cell cycle 2.745 3.429 n n n ruditapes_c18419 -1.275 0.777 3.253 2.551 n n n ruditapes_c13366 -1.278 0.777 3.185 2.492 n n n ruditapes_c22517 1.377 0.777 mgc69144 protein 1.292 1.779 n n n ruditapes_c7192 -1.422 0.777 c-type lectin /// 0005488 // binding 1.61 1.132 n n n ruditapes_c10351 -1.445 0.777 1.477 1.022 n n n ruditapes_c28632 -1.483 0.777 1.315 0.887 n n n ruditapes_lrc34977 -1.506 0.777 1.218 0.809 n y n ruditapes2_c5485 -1.601 0.777 eukaryotic translation initiation factor 3 subunit 3 gamma /// 0032403 // protein complex binding /// 0043234 // protein complex /// 0006412 // translation /// 0005829 // cytosol /// 0005792 // microsome 0.953 0.596 n y n ruditapes_s38831 1.949 0.777 toxin i 0.258 0.503 n y n ruditapes_s36036 -1.779 0.777 cytochrome c oxidase subunit viic 0.667 0.375 n y n ruditapes_c19551 -1.853 0.777 coagulation factor 2 /// 0030194 // positive regulation of blood coagulation /// 0051209 // release of sequestered calcium ion into cytosol /// 0005576 // extracellular region /// 0007166 // cell surface receptor linked signal transduction /// 0042730 // fibrinolysis /// 0032967 // positive regulation of collagen biosynthetic process /// 0005886 // plasma membrane /// 0032502 // developmental process /// 0070053 // thrombospondin receptor activity /// 0004252 // serine-type endopeptidase activity /// 0005102 // receptor binding 0.594 0.321 n y n ruditapes_lrc35176 -1.853 0.777 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.594 0.32 n y n ruditapes_c4564 -1.977 0.777 0.502 0.254 n y n ruditapes_c8381 -2.224 0.777 cd209 antigen /// 0005529 // sugar binding 0.391 0.176 n y n ruditapes_lrc38820 -2.224 0.777 member of ras oncogene family-like 4 0.389 0.175 n y n ruditapes_c14051 -2.669 0.777 0.286 0.107 n y n ruditapes_c25974 -2.965 0.777 pol-like protein 0.248 0.084 n y n ruditapes_c236 -2.965 0.777 type alpha 1 0.247 0.083 n y n ruditapes2_c1720 ? 0.777 0 0.081 n y n ruditapes_c19762 ? 0.777 0 0.081 n y n ruditapes_c21228 ? 0.777 0 0.081 n y n ruditapes_c22188 ? 0.777 0 0.081 n y n ruditapes_c25387 ? 0.777 0 0.081 n y n ruditapes_c31134 ? 0.777 0 0.081 n y n ruditapes2_c1771 ? 0.777 vitelline membrane outer layer 1 homolog 0 0.08 n y n ruditapes2_lrc3192 ? 0.777 0 0.08 n y n ruditapes_c10308 ? 0.777 0 0.08 n y n ruditapes_c1060 ? 0.777 0 0.08 n y n ruditapes_c14535 ? 0.777 0 0.08 n y n ruditapes_c29337 ? 0.777 0 0.08 n y n ruditapes_c6179 ? 0.777 0 0.08 n y n ruditapes_c876 ? 0.777 0 0.08 n y n ruditapes_lrc33075 ? 0.777 predicted protein [Physcomitrella patens subsp. patens] 0 0.08 n y n ruditapes_lrc36088 ? 0.777 heat shock protein 90 0 0.08 n y n ruditapes_lrc38018 ? 0.777 0 0.08 n y n ruditapes_c13788 -4.448 0.777 0.165 0.037 n y n ruditapes_c18052 -4.448 0.777 0.165 0.037 n y n ruditapes_c20247 -4.448 0.777 0.165 0.037 n y n ruditapes_c20638 -4.448 0.777 0.165 0.037 n y n ruditapes_c14628 -4.448 0.777 0.164 0.037 n y n ruditapes_lrc33704 -4.448 0.777 0.164 0.037 n y n ruditapes_lrc39708 -4.448 0.777 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0051082 // unfolded protein binding /// 0006457 // protein folding 0.164 0.037 n y n ruditapes_c18893 -? 0.777 0.081 0 n y n ruditapes_c21334 -? 0.777 0.081 0 n y n ruditapes_c23384 -? 0.777 0.081 0 n y n ruditapes_lrc37423 -? 0.777 0.081 0 n y n ruditapes_s38377 -? 0.777 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.081 0 n y n ruditapes_c15621 -? 0.777 0.08 0 n y n ruditapes_c18553 -? 0.777 0.08 0 n y n ruditapes_c18958 -? 0.777 0.08 0 n y n ruditapes_c21519 -? 0.777 0.08 0 n y n ruditapes_c25437 -? 0.777 0.08 0 n y n ruditapes_c25889 -? 0.777 0.08 0 n y n ruditapes_lrc35844 -? 0.777 galectin 3 0.08 0 n y n ruditapes_lrc39091 -? 0.777 0.08 0 n y n ruditapes_c8606 1.181 0.778 4.866 5.749 n n n ruditapes_c1495 -1.181 0.778 eukaryotic translation elongation factor 2 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0040007 // growth /// 0002119 // nematode larval development /// 0042221 // response to chemical stimulus /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0040035 // hermaphrodite genitalia development /// 0009792 // embryonic development ending in birth or egg hatching 6.761 5.723 n n n ruditapes_c16672 1.215 0.778 3.539 4.301 n n n ruditapes_c2126 -1.219 0.778 4.79 3.929 n n n ruditapes_c10780 -1.234 0.778 4.271 3.461 n n n ruditapes_c15729 -1.275 0.778 3.21 2.517 n n n ruditapes_c26266 1.384 0.778 hypothetical protein BRAFLDRAFT_94947 [Branchiostoma floridae] 1.234 1.707 n n n ruditapes_c18492 -1.345 0.778 2.216 1.648 n n n ruditapes_c20835 -1.374 0.778 carbonic anhydrase 2 1.936 1.41 n n n ruditapes_c16131 1.557 0.778 ring finger protein 2 0.637 0.991 n y n ruditapes2_lrc3798 1.686 0.778 0.441 0.743 n y n ruditapes_c11138 -1.639 0.778 0.865 0.528 n y n ruditapes2_c789 -1.718 0.778 peptidylprolyl isomerase c /// 0042277 // peptide binding 0.736 0.428 n y n ruditapes_c31392 -1.73 0.778 tripartite motif-containing 33 0.723 0.418 n y n ruditapes_c25179 2.136 0.778 macrophage migration inhibitory factor 2 0.19 0.405 n y n ruditapes2_lrc5758 -1.747 0.778 0.697 0.399 n y n ruditapes_c22065 2.248 0.778 0.163 0.367 n y n ruditapes_c17715 2.248 0.778 0.163 0.365 n y n ruditapes_c28205 -1.946 0.778 0.519 0.267 n y n ruditapes_c31740 -2.224 0.778 0.388 0.174 n y n ruditapes2_c2187 -2.224 0.778 fc fragment of low affinity receptor for /// 0048518 // positive regulation of biological process /// 0016020 // membrane 0.387 0.174 n y n ruditapes_c14930 -2.224 0.778 0.386 0.174 n y n ruditapes_c5694 -2.224 0.778 0.385 0.173 n y n ruditapes_lrc23074 -2.224 0.778 0.385 0.173 n y n ruditapes2_c1254 ? 0.778 0 0.08 n y n ruditapes_c11838 ? 0.778 0 0.08 n y n ruditapes_c12921 ? 0.778 0 0.08 n y n ruditapes_c19734 ? 0.778 0 0.08 n y n ruditapes_c19798 ? 0.778 0 0.08 n y n ruditapes_c20299 ? 0.778 0 0.08 n y n ruditapes_c24932 ? 0.778 predicted protein [Nematostella vectensis] 0 0.08 n y n ruditapes_lrc38071 ? 0.778 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 0 0.08 n y n ruditapes_s33217 ? 0.778 0 0.08 n y n ruditapes_s35531 ? 0.778 developmentally-regulated vdg3 0 0.08 n y n ruditapes2_c2731 ? 0.778 0 0.079 n y n ruditapes2_c4087 ? 0.778 metal-binding protein 0 0.079 n y n ruditapes2_lrc6291 ? 0.778 0 0.079 n y n ruditapes_c21150 ? 0.778 0 0.079 n y n ruditapes_c24094 ? 0.778 apolipoprotein b 0 0.079 n y n ruditapes_c35821 ? 0.778 countin-like protein 0 0.079 n y n ruditapes_lrc26903 ? 0.778 0 0.079 n y n ruditapes_s39608 -3.336 0.778 fkbp-type peptidyl-prolyl 0.213 0.064 n y n ruditapes_c32576 -3.336 0.778 0.212 0.064 n y n ruditapes_c18029 -4.448 0.778 0.163 0.037 n y n ruditapes_c23680 -4.448 0.778 0.163 0.037 n y n ruditapes_c17305 -? 0.778 0.08 0 n y n ruditapes_c17735 -? 0.778 0.08 0 n y n ruditapes_c19693 -? 0.778 0.08 0 n y n ruditapes_c19851 -? 0.778 0.08 0 n y n ruditapes_c20151 -? 0.778 0.08 0 n y n ruditapes_c3794 -? 0.778 0.08 0 n y n ruditapes_c8531 -? 0.778 0.08 0 n y n ruditapes_c8662 -? 0.778 0.08 0 n y n ruditapes_s40107 -? 0.778 0.08 0 n y n ruditapes_c11528 -? 0.778 0.079 0 n y n ruditapes_c18288 -? 0.778 0.079 0 n y n ruditapes_c21552 -? 0.778 0.079 0 n y n ruditapes_c21762 -? 0.778 0.079 0 n y n ruditapes_c24578 -? 0.778 0.079 0 n y n ruditapes_c8405 -? 0.778 0.079 0 n y n ruditapes_c8590 -? 0.778 0.079 0 n y n ruditapes_c9186 -? 0.778 0.079 0 n y n ruditapes_c9466 -? 0.778 0.079 0 n y n ruditapes_s35944 -? 0.778 0.079 0 n y n ruditapes_s39384 -? 0.778 0.079 0 n y n ruditapes_c13026 1.097 0.779 unnamed protein product [Tetraodon nigroviridis] 15.281 16.758 n n n ruditapes2_c4881 1.154 0.779 cell death-regulatory protein grim19 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 6.543 7.548 n n n ruditapes2_c2840 -1.179 0.779 6.902 5.855 n n n ruditapes_lrc30925 1.187 0.779 mitochondrial atp synthase lipid binding protein "/// 0000276 // mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) /// 0015986 // ATP synthesis coupled proton transport /// 0016021 // integral to membrane /// 0008289 // lipid binding /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 4.52 5.367 n n n ruditapes_c21379 1.212 0.779 3.633 4.402 n n n ruditapes_c15743 -1.271 0.779 predicted protein [Nematostella vectensis] 3.294 2.592 n n n ruditapes_c31126 1.316 0.779 serine threonine kinase 11 interacting protein 1.747 2.299 n n n ruditapes_c18077 -1.292 0.779 2.881 2.23 n n n ruditapes_c21101 1.33 0.779 1.601 2.129 n n n ruditapes_c10241 -1.398 0.779 1.743 1.247 n n n ruditapes_lrc9515 1.478 0.779 0.826 1.22 n n n ruditapes_c12953 1.542 0.779 0.663 1.022 n y n ruditapes2_lrc4991 -1.442 0.779 1.47 1.019 n n n ruditapes_c9249 1.574 0.779 0.6 0.944 n y n ruditapes_c23652 -1.483 0.779 1.287 0.868 n n n ruditapes_c2882 -1.506 0.779 isoform b "/// 0005975 // carbohydrate metabolic process /// 0016798 // hydrolase activity, acting on glycosyl bonds" 1.198 0.796 n y n ruditapes_c26322 -1.631 0.779 0.875 0.537 n y n ruditapes_c4382 -1.694 0.779 0.762 0.45 n y n ruditapes_c8107 2.024 0.779 0.222 0.45 n y n ruditapes_lrc36251 2.024 0.779 ribosomal protein s8 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022627 // cytosolic small ribosomal subunit 0.222 0.45 n y n ruditapes_lrc36882 2.099 0.779 0.199 0.417 n y n ruditapes_lrc18287 2.248 0.779 guanine nucleotide-binding protein subunit beta-2-like 1 /// 0019903 // protein phosphatase binding /// 0005886 // plasma membrane /// 0006281 // DNA repair /// 0043025 // cell soma /// 0005737 // cytoplasm /// 0005102 // receptor binding /// 0003908 // methylated-DNA-[protein]-cysteine S-methyltransferase activity /// 0016301 // kinase activity /// 0004872 // receptor activity 0.162 0.364 n y n ruditapes_c17350 -2.224 0.779 0.384 0.172 n y n ruditapes_c12962 ? 0.779 dendritic cell-derived ubiquitin-like protein /// 0006464 // protein modification process 0 0.079 n y n ruditapes_c15632 ? 0.779 wd repeat domain 49 0 0.079 n y n ruditapes_c23640 ? 0.779 0 0.079 n y n ruditapes_c3415 ? 0.779 0 0.079 n y n ruditapes_lrc18933 ? 0.779 baculoviral iap repeat-containing 3 /// 0014070 // response to organic cyclic substance /// 0007166 // cell surface receptor linked signal transduction /// 0001741 // XY body /// 0046872 // metal ion binding /// 0045471 // response to ethanol /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0005737 // cytoplasm /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity /// 0051591 // response to cAMP /// 0010243 // response to organic nitrogen 0 0.079 n y n ruditapes_lrc35137 ? 0.779 0 0.079 n y n ruditapes_c10724 ? 0.779 0 0.078 n y n ruditapes_c12878 ? 0.779 0 0.078 n y n ruditapes_c19315 ? 0.779 0 0.078 n y n ruditapes_c26010 ? 0.779 0 0.078 n y n ruditapes_c5058 ? 0.779 galactoside- 3 /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 0 0.078 n y n ruditapes_lrc7158 ? 0.779 hypothetical protein PE36_03526 [Moritella sp. PE36] 0 0.078 n y n ruditapes_c27267 -4.448 0.779 5 -nucleotidase 2 -cyclic phosphodiesterase-like hydrolase /// 0016787 // hydrolase activity 0.161 0.036 n y n ruditapes2_c1405 -6.671 0.779 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0003824 // catalytic activity 0.126 0.019 n y n ruditapes_c10479 -? 0.779 0.079 0 n y n ruditapes_c12026 -? 0.779 0.079 0 n y n ruditapes_c20261 -? 0.779 0.079 0 n y n ruditapes_c21905 -? 0.779 0.079 0 n y n ruditapes_c22998 -? 0.779 0.079 0 n y n ruditapes_c25298 -? 0.779 0.079 0 n y n ruditapes_c26472 -? 0.779 0.079 0 n y n ruditapes_c34503 -? 0.779 beta- precursor 0.079 0 n y n ruditapes_c9235 -? 0.779 0.079 0 n y n ruditapes_lrc25569 -? 0.779 proteasome maturation protein 0.079 0 n y n ruditapes_lrc37008 -? 0.779 atp h+ mitochondrial f0 subunit g /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.079 0 n y n ruditapes_lrc37536 -? 0.779 0.079 0 n y n ruditapes_s40261 -? 0.779 0.079 0 n y n ruditapes2_c2993 -? 0.779 0.078 0 n y n ruditapes_c12235 -? 0.779 0.078 0 n y n ruditapes_c20944 -? 0.779 0.078 0 n y n ruditapes_c21780 -? 0.779 0.078 0 n y n ruditapes2_lrc4494 -1.043 0.78 60s ribosomal protein l10a /// 0044444 // cytoplasmic part /// 0009987 // cellular process 125.557 120.353 n n n ruditapes2_c2116 -1.151 0.78 9.359 8.132 n n n ruditapes_c5381 -1.157 0.78 8.723 7.541 n n n ruditapes_c3385 1.21 0.78 3.671 4.439 n n n ruditapes2_c908 -1.213 0.78 4.966 4.094 n n n ruditapes_c29609 -1.271 0.78 3.236 2.547 n n n ruditapes_c24487 -1.322 0.78 2.418 1.828 n n n ruditapes_c10858 1.382 0.78 1.217 1.682 n n n ruditapes_c16991 -1.346 0.78 2.157 1.602 n n n ruditapes2_c6175 -1.355 0.78 2.06 1.52 n n n ruditapes_c22277 1.413 0.78 1.065 1.506 n n n ruditapes_c23246 1.518 0.78 0.71 1.078 n y n ruditapes2_c763 1.606 0.78 0.537 0.862 n y n ruditapes_c21259 -1.512 0.78 c1q and tumor necrosis factor related protein 3 1.162 0.769 n y n ruditapes_lrc38543 1.949 0.78 transport protein sec61 subunit beta "/// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation /// 0008565 // protein transporter activity /// 0005784 // translocon complex" 0.252 0.491 n y n ruditapes_c27195 -1.668 0.78 0.799 0.479 n y n ruditapes_c10966 2.099 0.78 0.197 0.413 n y n ruditapes_c14025 -1.73 0.78 0.71 0.411 n y n ruditapes_c20677 2.248 0.78 0.16 0.359 n y n ruditapes_c9605 2.698 0.78 0.099 0.267 n y n ruditapes_c9911 3.148 0.78 0.069 0.218 n y n ruditapes_c12077 -2.224 0.78 0.378 0.17 n y n ruditapes2_lrc5956 ? 0.78 DEC-3 [Lymnaea stagnalis] 0 0.078 n y n ruditapes_c14036 ? 0.78 0 0.078 n y n ruditapes_c18024 ? 0.78 0 0.078 n y n ruditapes_c18501 ? 0.78 0 0.078 n y n ruditapes_c24517 ? 0.78 0 0.078 n y n ruditapes_c25769 ? 0.78 sex peptide receptor 0 0.078 n y n ruditapes_c26661 ? 0.78 0 0.078 n y n ruditapes_c26679 ? 0.78 0 0.078 n y n ruditapes_c29025 ? 0.78 0 0.078 n y n ruditapes_c31147 ? 0.78 cd209 protein /// 0005488 // binding 0 0.078 n y n ruditapes_lrc18455 ? 0.78 0 0.078 n y n ruditapes_s37579 ? 0.78 protein kinase c 0 0.078 n y n ruditapes_s40372 ? 0.78 0 0.078 n y n ruditapes_c12493 -4.448 0.78 galactoside- 9 0.16 0.036 n y n ruditapes_s37697 -4.448 0.78 predicted protein [Physcomitrella patens subsp. patens] 0.16 0.036 n y n ruditapes_c19246 -4.448 0.78 0.159 0.036 n y n ruditapes_c22310 -4.448 0.78 0.159 0.036 n y n ruditapes_c4891 -4.448 0.78 0.159 0.036 n y n ruditapes_c12027 -? 0.78 0.078 0 n y n ruditapes_c13080 -? 0.78 0.078 0 n y n ruditapes_c17745 -? 0.78 0.078 0 n y n ruditapes_c18267 -? 0.78 0.078 0 n y n ruditapes_c21351 -? 0.78 0.078 0 n y n ruditapes_c22430 -? 0.78 0.078 0 n y n ruditapes_c22922 -? 0.78 0.078 0 n y n ruditapes_c27442 -? 0.78 0.078 0 n y n ruditapes_c9362 -? 0.78 0.078 0 n y n ruditapes_lrc32031 -1.148 0.781 cytoplasmic actin 9.579 8.341 n n n ruditapes_c17361 -1.168 0.781 7.561 6.474 n n n ruditapes_c22908 -1.172 0.781 7.263 6.196 n n n ruditapes2_lrc3304 -1.179 0.781 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 6.718 5.696 n n n ruditapes_lrc26816 -1.186 0.781 set translocation (myeloid leukemia-associated) /// 0048471 // perinuclear region of cytoplasm /// 0004864 // phosphoprotein phosphatase inhibitor activity /// 0006337 // nucleosome disassembly /// 0005634 // nucleus /// 0006334 // nucleosome assembly /// 0035067 // negative regulation of histone acetylation /// 0005783 // endoplasmic reticulum /// 0008601 // protein phosphatase type 2A regulator activity /// 0006260 // DNA replication /// 0006913 // nucleocytoplasmic transport /// 0042393 // histone binding 6.287 5.301 n n n ruditapes_c17451 1.245 0.781 2.724 3.393 n n n ruditapes_c23873 1.251 0.781 2.611 3.266 n n n ruditapes2_c262 1.283 0.781 complement component q subcomponent-like 1 2.093 2.685 n n n ruditapes_c20037 1.299 0.781 1.892 2.458 n n n ruditapes_c10305 -1.293 0.781 morn repeat containing 5 2.82 2.181 n n n ruditapes_c28254 -1.304 0.781 2.654 2.036 n n n ruditapes_c26075 1.461 0.781 0.867 1.267 n n n ruditapes_c3171 1.606 0.781 0.535 0.859 n y n ruditapes_c29441 -1.483 0.781 1.259 0.849 n n n ruditapes_c2091 -1.54 0.781 1.072 0.696 n y n ruditapes_c28409 -1.57 0.781 aminoadipate aminotransferase /// 0016740 // transferase activity 0.992 0.632 n y n ruditapes_c28456 1.799 0.781 0.332 0.596 n y n ruditapes_c28049 -1.701 0.781 hydroxylamine reductase 0.743 0.437 n y n ruditapes_c29769 -1.747 0.781 glutamate decarboxylase 1 ( 67kda) 0.682 0.39 n y n ruditapes_lrc34210 -1.853 0.781 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.576 0.311 n y n ruditapes_c13408 2.698 0.781 0.098 0.263 n y n ruditapes2_c459 -2.224 0.781 eukaryotic translation initiation factor 1a "/// 0007224 // smoothened signaling pathway /// 0016282 // eukaryotic 43S preinitiation complex /// 0006413 // translational initiation /// 0006911 // phagocytosis, engulfment /// 0000022 // mitotic spindle elongation /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0003723 // RNA binding" 0.376 0.169 n y n ruditapes_c30617 -2.224 0.781 0.376 0.169 n y n ruditapes_c13178 -2.224 0.781 0.375 0.168 n y n ruditapes_s36418 ? 0.781 nucleoside diphosphate kinase "/// 0008285 // negative regulation of cell proliferation /// 0005524 // ATP binding /// 0006355 // regulation of transcription, DNA-dependent /// 0048471 // perinuclear region of cytoplasm /// 0003700 // transcription factor activity /// 0043066 // negative regulation of apoptosis /// 0030819 // positive regulation of cAMP biosynthetic process /// 0030027 // lamellipodium /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0045618 // positive regulation of keratinocyte differentiation /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0050679 // positive regulation of epithelial cell proliferation /// 0006183 // GTP biosynthetic process /// 0005882 // intermediate filament /// 0001726 // ruffle /// 0006241 // CTP biosynthetic process /// 0002762 // negative regulation of myeloid leukocyte differentiation /// 0045682 // regulation of epidermis development /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006165 // nucleoside diphosphate phosphorylation /// 0006228 // UTP biosynthetic process /// 0045786 // negative regulation of cell cycle /// 0007155 // cell adhesion" 0 0.078 n y n ruditapes2_lrc5120 ? 0.781 0 0.077 n y n ruditapes_c16122 ? 0.781 n-acetylneuraminate lyase 0 0.077 n y n ruditapes_c16335 ? 0.781 predicted protein [Laccaria bicolor S238N-H82] 0 0.077 n y n ruditapes_c18680 ? 0.781 methyltransferase like 2 /// 0008168 // methyltransferase activity 0 0.077 n y n ruditapes_c20372 ? 0.781 hypothetical protein BRAFLDRAFT_74076 [Branchiostoma floridae] 0 0.077 n y n ruditapes_c8632 ? 0.781 0 0.077 n y n ruditapes_lrc20197 ? 0.781 ly-6 neurotoxin-related protein 0 0.077 n y n ruditapes_s32922 ? 0.781 0 0.077 n y n ruditapes_s35423 ? 0.781 0 0.077 n y n ruditapes_s36736 ? 0.781 ependymin related protein-1 precursor 0 0.077 n y n ruditapes_s37842 ? 0.781 26s proteasome regulatory subunit t3 /// 0009987 // cellular process /// 0044424 // intracellular part 0 0.077 n y n ruditapes_s39303 ? 0.781 signal transduction protein with efhand domain 0 0.077 n y n ruditapes_lrc31790 -3.336 0.781 0.208 0.062 n y n ruditapes_c20263 -3.336 0.781 hypothetical protein BRAFLDRAFT_86836 [Branchiostoma floridae] 0.206 0.062 n y n ruditapes_c21400 -4.448 0.781 0.159 0.036 n y n ruditapes_c8134 -4.448 0.781 0.159 0.036 n y n ruditapes_c13311 -? 0.781 0.078 0 n y n ruditapes_c14676 -? 0.781 0.078 0 n y n ruditapes_c11865 -? 0.781 0.077 0 n y n ruditapes_c11997 -? 0.781 0.077 0 n y n ruditapes_c18756 -? 0.781 0.077 0 n y n ruditapes_c19304 -? 0.781 0.077 0 n y n ruditapes_c21271 -? 0.781 0.077 0 n y n ruditapes_c21845 -? 0.781 0.077 0 n y n ruditapes_c30721 -? 0.781 0.077 0 n y n ruditapes_c7768 -? 0.781 0.077 0 n y n ruditapes_s36602 -? 0.781 0.077 0 n y n ruditapes_c38204 -1.165 0.782 7.796 6.693 n n n ruditapes2_c226 -1.178 0.782 clathrin light chain b /// 0044444 // cytoplasmic part /// 0016020 // membrane 6.734 5.715 n n n ruditapes_c4913 -1.184 0.782 6.384 5.393 n n n ruditapes_lrc35135 -1.184 0.782 6.349 5.364 n n n ruditapes_c795 1.191 0.782 4.248 5.06 n n n ruditapes_c23211 -1.202 0.782 5.349 4.45 n n n ruditapes_c9858 -1.213 0.782 heavy chain 8 /// 0015630 // microtubule cytoskeleton /// 0017111 // nucleoside-triphosphatase activity /// 0044430 // cytoskeletal part 4.876 4.02 n n n ruditapes_c10844 -1.239 0.782 u2 small nuclear rna auxiliary factor 2 "/// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0000398 // nuclear mRNA splicing, via spliceosome" 3.963 3.198 n n n ruditapes_c22722 -1.271 0.782 3.196 2.515 n n n ruditapes_c15731 1.396 0.782 1.124 1.57 n n n ruditapes_c28335 -1.354 0.782 2.049 1.514 n n n ruditapes_c7437 -1.412 0.782 ankyrin repeat and socs box-containing protein 13 /// 0005515 // protein binding 1.6 1.133 n n n ruditapes_c13272 -1.454 0.782 1.378 0.948 n n n ruditapes2_c2205 1.67 0.782 glutamine-oxaloacetic transaminase 0.444 0.741 n y n ruditapes_c23852 1.709 0.782 0.403 0.688 n y n ruditapes_lrc35817 1.889 0.782 ribosomal protein s8 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022627 // cytosolic small ribosomal subunit 0.274 0.518 n y n ruditapes2_c2519 1.911 0.782 0.264 0.505 n y n ruditapes_c4675 -1.652 0.782 0.811 0.491 n y n ruditapes_c20229 1.949 0.782 retinoic acid receptor responder (tazarotene induced) 3 0.246 0.48 n y n ruditapes_lrc38242 -1.668 0.782 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0042273 // ribosomal large subunit biogenesis 0.783 0.469 n y n ruditapes_c5474 -1.853 0.782 c-myc-binding protein (associate of myc 1) 0.567 0.306 n y n ruditapes_c514 3.148 0.782 0.068 0.214 n y n ruditapes_c30800 -2.224 0.782 0.372 0.167 n y n ruditapes_c14670 -2.224 0.782 0.371 0.167 n y n ruditapes_c24943 -2.965 0.782 0.235 0.079 n y n ruditapes2_c1418 ? 0.782 0 0.077 n y n ruditapes_c11700 ? 0.782 tripartite motif-containing 56 /// 0030027 // lamellipodium /// 0005078 // MAP-kinase scaffold activity /// 0046328 // regulation of JNK cascade /// 0005622 // intracellular 0 0.077 n y n ruditapes_c12335 ? 0.782 0 0.077 n y n ruditapes_c18441 ? 0.782 asialoglycoprotein receptor 2 /// 0065007 // biological regulation /// 0016020 // membrane /// 0005515 // protein binding /// 0009987 // cellular process /// 0004872 // receptor activity 0 0.077 n y n ruditapes_c19416 ? 0.782 0 0.077 n y n ruditapes_c19750 ? 0.782 0 0.077 n y n ruditapes_c28273 ? 0.782 0 0.077 n y n ruditapes_c30362 ? 0.782 0 0.077 n y n ruditapes_s37488 ? 0.782 protein 0 0.077 n y n ruditapes2_lrc5306 ? 0.782 tempt_aplca ame: full=temptin flags: precursor 0 0.076 n y n ruditapes_c12696 ? 0.782 0 0.076 n y n ruditapes_c19386 ? 0.782 0 0.076 n y n ruditapes_c19724 ? 0.782 subfamily c1a unassigned peptidase (c01 family) /// 0016787 // hydrolase activity 0 0.076 n y n ruditapes_c19975 ? 0.782 0 0.076 n y n ruditapes_c20371 ? 0.782 serine proteinase 0 0.076 n y n ruditapes_c20420 ? 0.782 cad88c cg3389-pa 0 0.076 n y n ruditapes_c21037 ? 0.782 predicted protein [Nematostella vectensis] 0 0.076 n y n ruditapes_c26231 ? 0.782 0 0.076 n y n ruditapes_c7483 ? 0.782 0 0.076 n y n ruditapes_c8883 ? 0.782 0 0.076 n y n ruditapes_s35770 ? 0.782 0 0.076 n y n ruditapes_lrc33104 -3.336 0.782 ribosomal protein l21 /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.204 0.061 n y n ruditapes_c13295 -4.448 0.782 0.158 0.035 n y n ruditapes_c14793 -4.448 0.782 0.158 0.035 n y n ruditapes_c11631 -4.448 0.782 0.157 0.035 n y n ruditapes_c22196 -4.448 0.782 0.157 0.035 n y n ruditapes_c30998 -4.448 0.782 fabgl protein 0.157 0.035 n y n ruditapes_lrc35532 -4.448 0.782 galactoside- 3 /// 0005488 // binding /// 0044424 // intracellular part 0.157 0.035 n y n ruditapes_c25964 -6.671 0.782 0.123 0.018 n y n ruditapes_c10025 -? 0.782 0.077 0 n y n ruditapes_c11336 -? 0.782 0.077 0 n y n ruditapes_c18186 -? 0.782 0.077 0 n y n ruditapes_c18793 -? 0.782 0.077 0 n y n ruditapes_c19203 -? 0.782 0.077 0 n y n ruditapes_c20500 -? 0.782 0.077 0 n y n ruditapes_c26178 -? 0.782 0.077 0 n y n ruditapes_c28775 -? 0.782 0.077 0 n y n ruditapes_c9661 -? 0.782 0.077 0 n y n ruditapes_c9929 -? 0.782 0.077 0 n y n ruditapes_lrc33672 -? 0.782 0.077 0 n y n ruditapes_s37843 -? 0.782 0.077 0 n y n ruditapes_c10267 -? 0.782 0.076 0 n y n ruditapes_c12328 -? 0.782 0.076 0 n y n ruditapes_c12890 -? 0.782 0.076 0 n y n ruditapes_c13922 -? 0.782 dicarbonyl l-xylulose reductase /// 0005975 // carbohydrate metabolic process /// 0044237 // cellular metabolic process /// 0016491 // oxidoreductase activity /// 0044464 // cell part 0.076 0 n y n ruditapes_c18270 -? 0.782 0.076 0 n y n ruditapes_c19274 -? 0.782 0.076 0 n y n ruditapes2_c762 1.127 0.783 8.88 10.012 n n n ruditapes2_lrc4746 -1.14 0.783 10.454 9.168 n n n ruditapes2_c1367 -1.15 0.783 9.143 7.947 n n n ruditapes_c10946 1.179 0.783 4.759 5.61 n n n ruditapes2_lrc4100 1.182 0.783 ribosomal protein l11 /// 0005811 // lipid particle /// 0030529 // ribonucleoprotein complex /// 0005515 // protein binding /// 0000022 // mitotic spindle elongation 4.637 5.481 n n n ruditapes_c27361 -1.184 0.783 6.3 5.322 n n n ruditapes_lrc35188 -1.207 0.783 protein /// 0008233 // peptidase activity 5.08 4.211 n n n ruditapes_c7354 -1.231 0.783 proteasome subunit beta type 3 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 4.164 3.382 n n n ruditapes_c14144 -1.234 0.783 4.072 3.3 n n n ruditapes2_c2421 1.282 0.783 achain crystal structure of the trimeric neck and carbohydrate recognition domain of r343v mutant of human surfactant protein d in complex with alpha 2.067 2.651 n n n ruditapes_c8219 1.325 0.783 1.591 2.109 n n n ruditapes_lrc38239 1.327 0.783 kazal-like serine protease inhibitor epi10 1.575 2.089 n n n ruditapes2_c334 -1.303 0.783 glutathione s-transferase pi /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005515 // protein binding /// 0032502 // developmental process 2.622 2.012 n n n ruditapes_c21704 -1.306 0.783 2.557 1.958 n n n ruditapes_c17113 1.349 0.783 chaperonin containing subunit 2 /// 0005832 // chaperonin-containing T-complex /// 0005730 // nucleolus /// 0005488 // binding 1.404 1.894 n n n ruditapes_lrc38077 1.424 0.783 40s ribosomal protein s3 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.983 1.4 n n n ruditapes_c27844 1.461 0.783 0.845 1.235 n n n ruditapes_c18072 1.472 0.783 0.811 1.194 n n n ruditapes_c28982 1.549 0.783 0.625 0.969 n y n ruditapes_c30035 -1.483 0.783 1.239 0.836 n n n ruditapes_s35555 1.686 0.783 0.421 0.711 n y n ruditapes_s39755 1.799 0.783 cytochrome c oxidase subunit via 0.326 0.586 n y n ruditapes_c25874 1.799 0.783 cg7382 cg7382-pa 0.324 0.583 n y n ruditapes_c12914 -1.694 0.783 0.733 0.433 n y n ruditapes_s39739 -2.224 0.783 0.369 0.166 n y n ruditapes_c19409 -2.224 0.783 0.368 0.165 n y n ruditapes_c16816 -2.669 0.783 0.269 0.101 n y n ruditapes_lrc35899 -2.669 0.783 0.269 0.101 n y n ruditapes_c27263 -2.965 0.783 0.232 0.078 n y n ruditapes2_c2939 ? 0.783 0 0.076 n y n ruditapes_c16128 ? 0.783 0 0.076 n y n ruditapes_c19388 ? 0.783 atp-binding sub-family c (cftr mrp) member 1 /// 0016887 // ATPase activity /// 0016020 // membrane 0 0.076 n y n ruditapes_c19422 ? 0.783 0 0.076 n y n ruditapes_c19784 ? 0.783 0 0.076 n y n ruditapes_c22181 ? 0.783 protein 0 0.076 n y n ruditapes_c25792 ? 0.783 loc795887 protein 0 0.076 n y n ruditapes_c26664 ? 0.783 0 0.076 n y n ruditapes_c2700 ? 0.783 0 0.076 n y n ruditapes_c27690 ? 0.783 peptidoglycan recognition 0 0.076 n y n ruditapes_c28349 ? 0.783 0 0.076 n y n ruditapes_c4396 ? 0.783 0 0.076 n y n ruditapes_lrc20468 ? 0.783 0 0.076 n y n ruditapes_lrc24650 ? 0.783 0 0.076 n y n ruditapes_s38951 ? 0.783 collectin sub-family member 12 /// 0016043 // cellular component organization /// 0005488 // binding /// 0050896 // response to stimulus /// 0004872 // receptor activity 0 0.076 n y n ruditapes_s39933 ? 0.783 0 0.076 n y n ruditapes_c895 -3.336 0.783 perlucin 4 0.203 0.061 n y n ruditapes_c17696 -4.448 0.783 0.156 0.035 n y n ruditapes_c18246 -4.448 0.783 0.156 0.035 n y n ruditapes_c39111 -4.448 0.783 0.156 0.035 n y n ruditapes_c4149 -4.448 0.783 0.156 0.035 n y n ruditapes_c5366 -4.448 0.783 0.156 0.035 n y n ruditapes_s39333 -4.448 0.783 protein 0.156 0.035 n y n ruditapes_c9065 -4.448 0.783 0.155 0.035 n y n ruditapes_c10343 -? 0.783 0.076 0 n y n ruditapes_c10758 -? 0.783 tenascin n /// 0005515 // protein binding /// 0016049 // cell growth /// 0007155 // cell adhesion /// 0044424 // intracellular part 0.076 0 n y n ruditapes_c13895 -? 0.783 0.076 0 n y n ruditapes_c18236 -? 0.783 0.076 0 n y n ruditapes_c19060 -? 0.783 0.076 0 n y n ruditapes_c30641 -? 0.783 0.076 0 n y n ruditapes_lrc27827 -? 0.783 60s ribosomal protein l7a /// 0030529 // ribonucleoprotein complex /// 0009987 // cellular process 0.076 0 n y n ruditapes_c17740 -1.106 0.784 17.919 16.199 n n n ruditapes2_c2304 1.118 0.784 10.069 11.261 n n n ruditapes_c1836 1.143 0.784 adhesion regulating molecule 1 /// 0044424 // intracellular part 7.154 8.175 n n n ruditapes_c31293 -1.172 0.784 7.067 6.029 n n n ruditapes2_c2808 -1.173 0.784 6.98 5.953 n n n ruditapes2_c1541 1.199 0.784 3.878 4.651 n n n ruditapes2_c2286 -1.201 0.784 apaf1 interacting protein 5.27 4.387 n n n ruditapes2_c1572 -1.213 0.784 4.763 3.927 n n n ruditapes_c23586 1.277 0.784 2.119 2.705 n n n ruditapes_s36715 -1.265 0.784 3.245 2.565 n n n ruditapes_c15236 -1.266 0.784 3.235 2.555 n n n ruditapes2_lrc5329 1.424 0.784 nadh dehydrogenase 1 beta 8kda 0.979 1.394 n n n ruditapes_c18408 -1.454 0.784 1.344 0.925 n n n ruditapes2_lrc5348 -1.459 0.784 unnamed protein product [Tetraodon nigroviridis] 1.322 0.906 n n n ruditapes_c17520 1.709 0.784 hypothetical protein BRAFLDRAFT_95815 [Branchiostoma floridae] 0.397 0.678 n y n ruditapes_c14168 1.799 0.784 0.322 0.578 n y n ruditapes_c11641 -1.946 0.784 0.491 0.252 n y n ruditapes_s36513 -2.224 0.784 0.367 0.165 n y n ruditapes_c1274 -2.224 0.784 fatty acid binding protein adipocyte /// 0032501 // multicellular organismal process /// 0045444 // fat cell differentiation /// 0050789 // regulation of biological process 0.365 0.164 n y n ruditapes_lrc36147 -2.224 0.784 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.364 0.164 n y n ruditapes_c14423 -2.224 0.784 0.364 0.163 n y n ruditapes2_lrc4190 ? 0.784 serine proteinase 0 0.075 n y n ruditapes_c11529 ? 0.784 0 0.075 n y n ruditapes_c12265 ? 0.784 spi1_craviserine protease inhibitor cvsi-1 precursor 0 0.075 n y n ruditapes_c12592 ? 0.784 0 0.075 n y n ruditapes_c14486 ? 0.784 0 0.075 n y n ruditapes_c17459 ? 0.784 hypothetical protein BRAFLDRAFT_74510 [Branchiostoma floridae] 0 0.075 n y n ruditapes_c18277 ? 0.784 0 0.075 n y n ruditapes_c19011 ? 0.784 0 0.075 n y n ruditapes_c19285 ? 0.784 0 0.075 n y n ruditapes_c20838 ? 0.784 fha-hit protein 0 0.075 n y n ruditapes_c20893 ? 0.784 0 0.075 n y n ruditapes_c21504 ? 0.784 0 0.075 n y n ruditapes_c24283 ? 0.784 0 0.075 n y n ruditapes_c24979 ? 0.784 nicotinic acetylcholine receptor alpha 1 subunit /// 0016020 // membrane 0 0.075 n y n ruditapes_c25296 ? 0.784 0 0.075 n y n ruditapes_c7808 ? 0.784 0 0.075 n y n ruditapes_c8155 ? 0.784 0 0.075 n y n ruditapes_c8412 ? 0.784 0 0.075 n y n ruditapes_lrc34501 ? 0.784 0 0.075 n y n ruditapes_lrc38802 ? 0.784 DEC-3 [Lymnaea stagnalis] 0 0.075 n y n ruditapes_s37788 ? 0.784 0 0.075 n y n ruditapes_s39023 ? 0.784 hypothetical protein BRAFLDRAFT_125701 [Branchiostoma floridae] 0 0.075 n y n ruditapes_c13346 -3.336 0.784 0.201 0.06 n y n ruditapes_c10713 -? 0.784 0.075 0 n y n ruditapes_c14739 -? 0.784 0.075 0 n y n ruditapes_c17330 -? 0.784 0.075 0 n y n ruditapes_c18430 -? 0.784 e74-like factor 3 "/// 0051016 // barbed-end actin filament capping /// 0006355 // regulation of transcription, DNA-dependent /// 0005200 // structural constituent of cytoskeleton /// 0006366 // transcription from RNA polymerase II promoter /// 0003700 // transcription factor activity /// 0005516 // calmodulin binding /// 0030855 // epithelial cell differentiation /// 0008091 // spectrin /// 0043565 // sequence-specific DNA binding /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0007182 // common-partner SMAD protein phosphorylation /// 0005886 // plasma membrane /// 0003779 // actin binding /// 0007184 // SMAD protein nuclear translocation /// 0030198 // extracellular matrix organization /// 0006954 // inflammatory response /// 0016564 // transcription repressor activity /// 0008544 // epidermis development /// 0060056 // mammary gland involution /// 0009790 // embryonic development" 0.075 0 n y n ruditapes_c24675 -? 0.784 0.075 0 n y n ruditapes_c5483 -? 0.784 0.075 0 n y n ruditapes_c7918 -? 0.784 0.075 0 n y n ruditapes_c29797 1.083 0.785 19.175 20.764 n n n ruditapes_c9153 -1.154 0.785 8.549 7.407 n n n ruditapes_c15842 -1.24 0.785 3.804 3.068 n n n ruditapes_c23650 1.288 0.785 1.944 2.503 n n n ruditapes_c30060 -1.334 0.785 2.165 1.622 n n n ruditapes_c20019 -1.356 0.785 1.969 1.452 n n n ruditapes_c14885 1.409 0.785 1.027 1.447 n n n ruditapes_c8454 1.574 0.785 0.566 0.892 n y n ruditapes_c13867 -1.466 0.785 hypothetical protein BRAFLDRAFT_80394 [Branchiostoma floridae] 1.281 0.874 n n n ruditapes_c13262 -1.483 0.785 1.22 0.823 n n n ruditapes_c1772 -1.483 0.785 acn9 homolog ( cerevisiae) 1.217 0.821 n n n ruditapes_c22555 -1.57 0.785 ohcu decarboxylase 0.949 0.604 n y n ruditapes_c29243 1.874 0.785 0.275 0.516 n y n ruditapes_c20568 -1.668 0.785 0.762 0.457 n y n ruditapes_c9183 2.099 0.785 0.187 0.393 n y n ruditapes_c32492 2.248 0.785 0.153 0.345 n y n ruditapes_c8787 2.248 0.785 0.153 0.344 n y n ruditapes_c27892 -1.853 0.785 0.553 0.298 n y n ruditapes_c24968 -2.224 0.785 0.363 0.163 n y n ruditapes_c22967 -2.224 0.785 0.362 0.163 n y n ruditapes2_c1177 -2.224 0.785 serum amyloid a /// 0005615 // extracellular space 0.36 0.162 n y n ruditapes_lrc32288 -2.965 0.785 serum amyloid a /// 0005515 // protein binding /// 0005615 // extracellular space /// 0008203 // cholesterol metabolic process 0.228 0.077 n y n ruditapes_c11922 ? 0.785 novel protein human megf11 protein 0 0.075 n y n ruditapes_c29957 ? 0.785 0 0.075 n y n ruditapes_c8561 ? 0.785 0 0.075 n y n ruditapes_c18163 ? 0.785 0 0.074 n y n ruditapes_c20668 ? 0.785 0 0.074 n y n ruditapes_c23530 ? 0.785 0 0.074 n y n ruditapes_c2751 ? 0.785 0 0.074 n y n ruditapes_c7230 ? 0.785 0 0.074 n y n ruditapes_s38165 ? 0.785 serine protease cfsp3 /// 0008236 // serine-type peptidase activity 0 0.074 n y n ruditapes_s39740 ? 0.785 nucleoside diphosphate kinase 0 0.074 n y n ruditapes_s40338 ? 0.785 hypothetical protein BRAFLDRAFT_231170 [Branchiostoma floridae] 0 0.074 n y n ruditapes_c10539 -4.448 0.785 0.153 0.034 n y n ruditapes2_lrc5985 -4.448 0.785 0.152 0.034 n y n ruditapes_c3277 -4.448 0.785 0.152 0.034 n y n ruditapes_c16145 -? 0.785 0.075 0 n y n ruditapes_c17796 -? 0.785 0.075 0 n y n ruditapes_c23379 -? 0.785 0.075 0 n y n ruditapes_c24428 -? 0.785 0.075 0 n y n ruditapes_c17702 -? 0.785 0.074 0 n y n ruditapes_c18117 -? 0.785 0.074 0 n y n ruditapes_c18400 -? 0.785 0.074 0 n y n ruditapes_c19521 -? 0.785 0.074 0 n y n ruditapes_lrc32320 -? 0.785 0.074 0 n y n ruditapes_c24274 1.167 0.786 5.303 6.186 n n n ruditapes_c24579 -1.187 0.786 5.966 5.027 n n n ruditapes_c30132 -1.197 0.786 5.369 4.484 n n n ruditapes_lrc39109 -1.265 0.786 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 3.187 2.52 n n n ruditapes_c9713 -1.285 0.786 2.821 2.195 n n n ruditapes_c25239 -1.302 0.786 2.548 1.957 n n n ruditapes_c16512 -1.308 0.786 2.466 1.885 n n n ruditapes_c7946 1.387 0.786 1.134 1.572 n n n ruditapes2_c883 1.424 0.786 0.957 1.362 n n n ruditapes_c15649 -1.374 0.786 1.798 1.309 n n n ruditapes_c20539 -1.57 0.786 0.945 0.602 n y n ruditapes_c18463 -1.57 0.786 0.943 0.601 n y n ruditapes_lrc38036 -1.57 0.786 0.941 0.6 n y n ruditapes_c27836 -1.617 0.786 0.843 0.521 n y n ruditapes_c11852 -1.668 0.786 xaa-pro aminopeptidase 0.754 0.452 n y n ruditapes_lrc9099 2.698 0.786 0.094 0.252 n y n ruditapes_c6615 -2.224 0.786 0.359 0.161 n y n ruditapes2_c62 -2.224 0.786 gastric intrinsic factor 0.358 0.161 n y n ruditapes_c25862 -2.224 0.786 0.358 0.161 n y n ruditapes_c39385 -2.224 0.786 odd oz protein 0.358 0.161 n y n ruditapes_c16661 -2.78 0.786 0.247 0.089 n y n ruditapes_lrc32681 -2.78 0.786 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.247 0.089 n y n ruditapes_c10667 ? 0.786 0 0.074 n y n ruditapes_c11456 ? 0.786 0 0.074 n y n ruditapes_c11883 ? 0.786 0 0.074 n y n ruditapes_c18871 ? 0.786 0 0.074 n y n ruditapes_c20508 ? 0.786 0 0.074 n y n ruditapes_c20514 ? 0.786 0 0.074 n y n ruditapes_c23446 ? 0.786 0 0.074 n y n ruditapes_c24604 ? 0.786 transposase 0 0.074 n y n ruditapes_c27821 ? 0.786 0 0.074 n y n ruditapes_c5205 ? 0.786 novel protein 0 0.074 n y n ruditapes_lrc33882 ? 0.786 signal transduction protein with efhand domain 0 0.074 n y n ruditapes_lrc38864 ? 0.786 nadh dehydrogenase 1 alpha 7 ( ) /// 0005739 // mitochondrion 0 0.074 n y n ruditapes_s35919 ? 0.786 0 0.074 n y n ruditapes_s36356 ? 0.786 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0.074 n y n ruditapes_s37987 ? 0.786 ferritin /// 0046914 // transition metal ion binding 0 0.074 n y n ruditapes_s38015 ? 0.786 0 0.074 n y n ruditapes_s39427 ? 0.786 0 0.074 n y n ruditapes_c11028 ? 0.786 0 0.073 n y n ruditapes_c13239 ? 0.786 0 0.073 n y n ruditapes_c22067 ? 0.786 0 0.073 n y n ruditapes_c24586 ? 0.786 0 0.073 n y n ruditapes_c6597 ? 0.786 0 0.073 n y n ruditapes_lrc11298 ? 0.786 0 0.073 n y n ruditapes_lrc34293 -3.336 0.786 0.197 0.059 n y n ruditapes2_lrc7254 -4.448 0.786 ganglioside m2 activator-like protein 0.152 0.034 n y n ruditapes2_lrc5086 -4.448 0.786 0.151 0.034 n y n ruditapes_c12979 -4.448 0.786 0.151 0.034 n y n ruditapes_c16778 -4.448 0.786 0.151 0.034 n y n ruditapes_c7412 -6.671 0.786 caprin family member 2 0.118 0.018 n y n ruditapes2_c3271 -? 0.786 0.074 0 n y n ruditapes_c12087 -? 0.786 transmembrane cell adhesion receptor mua-3 precursor 0.074 0 n y n ruditapes_c12293 -? 0.786 0.074 0 n y n ruditapes_c18571 -? 0.786 0.074 0 n y n ruditapes_c20282 -? 0.786 0.074 0 n y n ruditapes_c23399 -? 0.786 0.074 0 n y n ruditapes_c6729 -? 0.786 0.074 0 n y n ruditapes_c12287 -? 0.786 0.073 0 n y n ruditapes_c4185 -1.1 0.787 19.606 17.827 n n n ruditapes_c9634 1.111 0.787 10.97 12.192 n n n ruditapes_c5557 -1.121 0.787 13.566 12.107 n n n ruditapes_c22032 1.143 0.787 6.987 7.983 n n n ruditapes_c8174 -1.213 0.787 4.638 3.824 n n n ruditapes_c22759 -1.238 0.787 3.829 3.094 n n n ruditapes2_lrc4846 1.262 0.787 calcium-binding ef-hand domain protein 2.271 2.865 n n n ruditapes2_c2484 1.263 0.787 2.264 2.859 n n n ruditapes_c9250 1.29 0.787 1.889 2.437 n n n ruditapes_c3562 1.349 0.787 1.343 1.811 n n n ruditapes_c27961 -1.334 0.787 2.14 1.604 n n n ruditapes2_c2900 -1.334 0.787 2.131 1.597 n n n ruditapes_c26357 1.384 0.787 1.133 1.568 n n n ruditapes_c26547 -1.375 0.787 1.772 1.289 n n n ruditapes_lrc35654 -1.375 0.787 histone /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0001740 // Barr body /// 0006334 // nucleosome assembly /// 0003677 // DNA binding /// 0010171 // body morphogenesis /// 0007155 // cell adhesion /// 0008360 // regulation of cell shape /// 0009792 // embryonic development ending in birth or egg hatching /// 0000786 // nucleosome 1.772 1.289 n n n ruditapes_c12401 -1.375 0.787 polysaccharide lyase family 14 protein 1.765 1.284 n n n ruditapes_c10904 1.518 0.787 malate dehydrogenase /// 0044237 // cellular metabolic process /// 0016491 // oxidoreductase activity 0.666 1.01 n y n ruditapes2_c1387 1.553 0.787 0.589 0.915 n y n ruditapes_c24730 1.574 0.787 0.552 0.868 n y n ruditapes_lrc35200 1.799 0.787 nadh dehydrogenase 1 beta 18kda /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0016020 // membrane /// 0016491 // oxidoreductase activity 0.313 0.562 n y n ruditapes_c17721 -1.606 0.787 0.858 0.534 n y n ruditapes_c26867 1.949 0.787 0.236 0.459 n y n ruditapes_c16347 -1.668 0.787 protein 0.747 0.448 n y n ruditapes_c21329 -1.668 0.787 0.745 0.447 n y n ruditapes_c15183 2.024 0.787 0.207 0.419 n y n ruditapes_c18637 -1.779 0.787 0.608 0.341 n y n ruditapes_c10138 -1.837 0.787 0.552 0.301 n y n ruditapes_c7523 -2.224 0.787 low density lipo protein 12 /// 0016020 // membrane /// 0006897 // endocytosis 0.356 0.16 n y n ruditapes_c27919 -2.224 0.787 beta acid (includes glucosylceramidase) isoform cra_a /// 0005975 // carbohydrate metabolic process /// 0004348 // glucosylceramidase activity /// 0005515 // protein binding /// 0043169 // cation binding /// 0006665 // sphingolipid metabolic process /// 0007040 // lysosome organization /// 0005765 // lysosomal membrane 0.353 0.159 n y n ruditapes_c8944 -2.669 0.787 0.26 0.098 n y n ruditapes2_c2490 ? 0.787 0 0.073 n y n ruditapes_c17875 ? 0.787 0 0.073 n y n ruditapes_c18321 ? 0.787 0 0.073 n y n ruditapes_c18715 ? 0.787 0 0.073 n y n ruditapes_c19186 ? 0.787 0 0.073 n y n ruditapes_c19227 ? 0.787 0 0.073 n y n ruditapes_c20449 ? 0.787 0 0.073 n y n ruditapes_c20513 ? 0.787 0 0.073 n y n ruditapes_c21675 ? 0.787 0 0.073 n y n ruditapes_c23529 ? 0.787 loc549482 protein 0 0.073 n y n ruditapes_c25234 ? 0.787 0 0.073 n y n ruditapes_c28629 ? 0.787 0 0.073 n y n ruditapes_c31896 ? 0.787 0 0.073 n y n ruditapes_c9025 ? 0.787 fatty acid-binding brain 0 0.073 n y n ruditapes_lrc18630 ? 0.787 0 0.073 n y n ruditapes_lrc21378 ? 0.787 0 0.073 n y n ruditapes_lrc35340 ? 0.787 0 0.073 n y n ruditapes_lrc37053 ? 0.787 glutathione s-transferase /// 0005515 // protein binding 0 0.073 n y n ruditapes_s35739 ? 0.787 0 0.073 n y n ruditapes_c22716 -4.448 0.787 0.149 0.034 n y n ruditapes2_c1602 -? 0.787 0.073 0 n y n ruditapes_c11780 -? 0.787 0.073 0 n y n ruditapes_c12140 -? 0.787 0.073 0 n y n ruditapes_c24613 -? 0.787 0.073 0 n y n ruditapes_c31342 -? 0.787 peptide methionine sulfoxide reductase "/// 0016671 // oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor /// 0019538 // protein metabolic process" 0.073 0 n y n ruditapes2_lrc4496 -1.066 0.788 basic transcription factor 3-like 4 45.478 42.657 n n n ruditapes_c15742 1.107 0.788 11.751 13.007 n n n ruditapes2_c322 -1.155 0.788 myosin heavy chain /// 0005515 // protein binding 8.228 7.125 n n n ruditapes_c4651 1.169 0.788 5.013 5.861 n n n ruditapes2_c1442 -1.198 0.788 5.203 4.342 n n n ruditapes2_c2012 -1.206 0.788 neutral endopeptidase 4.875 4.043 n n n ruditapes_c12569 -1.222 0.788 4.267 3.491 n n n ruditapes_c23368 -1.244 0.788 3.588 2.883 n n n ruditapes_c30516 -1.255 0.788 3.347 2.666 n n n ruditapes_c10618 1.278 0.788 tryptophan-rich antigen (pv-fam-a) 2.016 2.576 n n n ruditapes2_c1109 -1.261 0.788 3.196 2.534 n n n ruditapes_lrc8140 -1.322 0.788 2.244 1.697 n n n ruditapes_c35698 -1.346 0.788 alkaline phosphatase /// 0046872 // metal ion binding /// 0005886 // plasma membrane /// 0051384 // response to glucocorticoid stimulus /// 0004035 // alkaline phosphatase activity /// 0046677 // response to antibiotic 1.996 1.483 n n n ruditapes_lrc38469 -1.39 0.788 ribosomal protein s19 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.653 1.189 n n n ruditapes_c11788 1.472 0.788 0.78 1.148 n n n ruditapes2_c2578 -1.529 0.788 1.026 0.671 n y n ruditapes_c6776 1.799 0.788 0.312 0.561 n y n ruditapes_c16641 1.874 0.788 dual oxidase 1 /// 0035264 // multicellular organism growth /// 0030878 // thyroid gland development /// 0016020 // membrane /// 0042403 // thyroid hormone metabolic process /// 0009615 // response to virus /// 0009566 // fertilization /// 0016174 // NAD(P)H oxidase activity /// 0048839 // inner ear development /// 0005509 // calcium ion binding /// 0051591 // response to cAMP /// 0019221 // cytokine-mediated signaling pathway /// 0048855 // adenohypophysis morphogenesis /// 0030282 // bone mineralization 0.266 0.498 n y n ruditapes_c12409 -1.639 0.788 0.791 0.483 n y n ruditapes_c30159 -1.73 0.788 0.659 0.381 n y n ruditapes_c26369 -1.747 0.788 0.634 0.363 n y n ruditapes_c24644 3.148 0.788 0.064 0.203 n y n ruditapes_c9507 3.148 0.788 protein 0.064 0.202 n y n ruditapes2_lrc6586 ? 0.788 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0 0.073 n y n ruditapes_c10749 ? 0.788 0 0.073 n y n ruditapes2_lrc6891 ? 0.788 lim domain and actin binding 1 0 0.072 n y n ruditapes_c10471 ? 0.788 0 0.072 n y n ruditapes_c11778 ? 0.788 0 0.072 n y n ruditapes_c12012 ? 0.788 0 0.072 n y n ruditapes_c12267 ? 0.788 0 0.072 n y n ruditapes_c18036 ? 0.788 0 0.072 n y n ruditapes_c18515 ? 0.788 retrotransposon ty3-gypsy subclass 0 0.072 n y n ruditapes_c19415 ? 0.788 0 0.072 n y n ruditapes_c20833 ? 0.788 0 0.072 n y n ruditapes_c20897 ? 0.788 0 0.072 n y n ruditapes_c21859 ? 0.788 0 0.072 n y n ruditapes_c25369 ? 0.788 mgc154819 protein "/// 0055114 // oxidation reduction /// 0051537 // 2 iron, 2 sulfur cluster binding /// 0016491 // oxidoreductase activity /// 0009055 // electron carrier activity" 0 0.072 n y n ruditapes_c29086 ? 0.788 0 0.072 n y n ruditapes_c7055 ? 0.788 0 0.072 n y n ruditapes_c8983 ? 0.788 0 0.072 n y n ruditapes_c9847 ? 0.788 hypothetical protein BRAFLDRAFT_124075 [Branchiostoma floridae] 0 0.072 n y n ruditapes_lrc19374 ? 0.788 0 0.072 n y n ruditapes_s39639 ? 0.788 0 0.072 n y n ruditapes_s39925 ? 0.788 0 0.072 n y n ruditapes_c22482 -4.448 0.788 g protein beta subunit-like /// 0032314 // regulation of Rac GTPase activity /// 0030838 // positive regulation of actin filament polymerization /// 0044424 // intracellular part /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation 0.149 0.033 n y n ruditapes_c29877 -4.448 0.788 0.148 0.033 n y n ruditapes_c21463 -? 0.788 0.073 0 n y n ruditapes_c26552 -? 0.788 0.073 0 n y n ruditapes_c17437 -? 0.788 0.072 0 n y n ruditapes_c24478 -? 0.788 0.072 0 n y n ruditapes_lrc39272 -? 0.788 0.072 0 n y n ruditapes_c30742 -1.128 0.789 11.642 10.317 n n n ruditapes_c2111 1.122 0.789 cytochrome c oxidase subunit iv 9.14 10.254 n n n ruditapes_c14143 -1.14 0.789 9.999 8.774 n n n ruditapes_c22757 -1.146 0.789 9.211 8.041 n n n ruditapes_c12404 1.147 0.789 sequestosome 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0006950 // response to stress /// 0019901 // protein kinase binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0046872 // metal ion binding /// 0030971 // receptor tyrosine kinase binding /// 0043130 // ubiquitin binding /// 0008104 // protein localization /// 0042169 // SH2 domain binding /// 0005829 // cytosol /// 0016197 // endosome transport /// 0043122 // regulation of I-kappaB kinase/NF-kappaB cascade 6.416 7.361 n n n ruditapes_c19993 1.178 0.789 4.521 5.328 n n n ruditapes_lrc28166 1.187 0.789 40s ribosomal protein s3 /// 0034961 // cellular biopolymer biosynthetic process /// 0044238 // primary metabolic process /// 0005488 // binding /// 0015935 // small ribosomal subunit /// 0010467 // gene expression /// 0042995 // cell projection /// 0005829 // cytosol /// 0050794 // regulation of cellular process 4.171 4.95 n n n ruditapes_c18744 1.19 0.789 4.024 4.79 n n n ruditapes_c18171 -1.209 0.789 4.689 3.878 n n n ruditapes_c10733 1.237 0.789 2.68 3.314 n n n ruditapes_c6386 1.294 0.789 1.811 2.344 n n n ruditapes_c22258 -1.275 0.789 2.887 2.264 n n n ruditapes_c31957 -1.282 0.789 2.792 2.178 n n n ruditapes_c13069 1.31 0.789 1.643 2.152 n n n ruditapes_lrc35083 -1.304 0.789 ribosomal protein l21 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation 2.446 1.877 n n n ruditapes_c14812 -1.368 0.789 1.777 1.298 n n n ruditapes_c29004 1.461 0.789 0.803 1.174 n n n ruditapes_c15382 1.472 0.789 riken cdna 4930404h21 gene 0.766 1.127 n n n ruditapes_c29225 -1.415 0.789 1.47 1.039 n n n ruditapes_s36738 -1.45 0.789 "PREDICTED: similar to hCG1784522, [Monodelphis domestica]" 1.307 0.901 n n n ruditapes_c36483 -1.483 0.789 1.167 0.787 n n n ruditapes_c12184 1.649 0.789 0.437 0.721 n y n ruditapes_c23126 -1.529 0.789 1.024 0.67 n y n ruditapes_s35998 -1.588 0.789 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 0.878 0.552 n y n ruditapes_c25952 -1.617 0.789 0.814 0.503 n y n ruditapes_lrc34334 1.949 0.789 ubiquinol-cytochrome c complex iii subunit /// 0005739 // mitochondrion /// 0016020 // membrane 0.231 0.45 n y n ruditapes_c16926 -1.747 0.789 u2 small nuclear ribonucleoprotein 0.632 0.361 n y n ruditapes_lrc38606 -1.819 0.789 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.561 0.308 n y n ruditapes_lrc12352 2.473 0.789 0.114 0.281 n y n ruditapes_c4812 2.698 0.789 0.091 0.245 n y n ruditapes_lrc36795 2.698 0.789 0.09 0.244 n y n ruditapes_c21962 -2.224 0.789 0.349 0.157 n y n ruditapes_c12502 4.047 0.789 0.039 0.157 n y n ruditapes_c8136 -2.965 0.789 odd oz protein 0.221 0.075 n y n ruditapes2_lrc4986 ? 0.789 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0 0.072 n y n ruditapes_c12965 ? 0.789 0 0.072 n y n ruditapes_c13387 ? 0.789 0 0.072 n y n ruditapes_c13989 ? 0.789 0 0.072 n y n ruditapes_c18473 ? 0.789 0 0.072 n y n ruditapes_c18894 ? 0.789 0 0.072 n y n ruditapes_c19411 ? 0.789 0 0.072 n y n ruditapes_c20124 ? 0.789 0 0.072 n y n ruditapes_c26255 ? 0.789 0 0.072 n y n ruditapes_c31389 ? 0.789 0 0.072 n y n ruditapes_c3401 ? 0.789 transcriptional adaptor 2 /// 0045449 // regulation of transcription /// 0000124 // SAGA complex /// 0005515 // protein binding /// 0007412 // axon target recognition /// 0005700 // polytene chromosome /// 0006338 // chromatin remodeling /// 0035066 // positive regulation of histone acetylation 0 0.072 n y n ruditapes_c4298 ? 0.789 peptidoglycan-recognition protein precursor 0 0.072 n y n ruditapes_lrc38192 ? 0.789 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 0 0.072 n y n ruditapes_c20604 ? 0.789 0 0.071 n y n ruditapes2_c3574 -3.336 0.789 cub and zona pellucida-like domains 1 0.192 0.058 n y n ruditapes_c24417 -3.336 0.789 protein 0.191 0.057 n y n ruditapes_lrc16955 -4.448 0.789 0.148 0.033 n y n ruditapes_c15702 -4.448 0.789 0.147 0.033 n y n ruditapes_c13193 -? 0.789 0.072 0 n y n ruditapes_lrc35313 -? 0.789 0.072 0 n y n ruditapes_c5475 -? 0.789 0.071 0 n y n ruditapes_c23130 -1.114 0.79 14.582 13.088 n n n ruditapes_c18602 1.14 0.79 6.958 7.934 n n n ruditapes_c12123 -1.189 0.79 5.626 4.733 n n n ruditapes2_c2126 1.241 0.79 2.586 3.209 n n n ruditapes2_c1676 1.274 0.79 2.023 2.577 n n n ruditapes2_c3410 -1.259 0.79 calmodulin /// 0005516 // calmodulin binding /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0030425 // dendrite /// 0007052 // mitotic spindle organization 3.192 2.534 n n n ruditapes_c15301 -1.267 0.79 3.007 2.373 n n n ruditapes2_c2583 -1.271 0.79 2.958 2.328 n n n ruditapes_c18191 1.325 0.79 1.481 1.963 n n n ruditapes_c23492 -1.308 0.79 2.372 1.813 n n n ruditapes_c9237 1.349 0.79 1.314 1.773 n n n ruditapes_c19025 -1.345 0.79 39s ribosomal protein mitochondrial precursor 1.978 1.471 n n n ruditapes_c26710 -1.346 0.79 1.951 1.45 n n n ruditapes2_c606 -1.423 0.79 hepatitis b virus x interacting protein /// 0019079 // viral genome replication /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0009615 // response to virus /// 0005829 // cytosol /// 0043154 // negative regulation of caspase activity 1.414 0.993 n n n ruditapes_c1524 -1.439 0.79 1.346 0.935 n n n ruditapes_lrc37775 -1.509 0.79 ccaat enhancer binding protein gamma 1.067 0.707 n y n ruditapes_c15069 1.67 0.79 0.411 0.687 n y n ruditapes_c9030 -1.73 0.79 0.644 0.372 n y n ruditapes_lrc35489 2.398 0.79 transgelin 2 0.122 0.292 n y n ruditapes2_lrc4340 2.473 0.79 cysteine protease inhibitor 0.111 0.276 n y n ruditapes2_c3716 2.698 0.79 0.09 0.242 n y n ruditapes_c3292 -2.001 0.79 hypotheticial protein 0.431 0.216 n y n ruditapes2_c595 -2.224 0.79 0.344 0.155 n y n ruditapes2_c2120 ? 0.79 0 0.071 n y n ruditapes_c10056 ? 0.79 0 0.071 n y n ruditapes_c11982 ? 0.79 0 0.071 n y n ruditapes_c12118 ? 0.79 0 0.071 n y n ruditapes_c12636 ? 0.79 0 0.071 n y n ruditapes_c17798 ? 0.79 coagulation factor x 0 0.071 n y n ruditapes_c17804 ? 0.79 0 0.071 n y n ruditapes_c17857 ? 0.79 0 0.071 n y n ruditapes_c18241 ? 0.79 0 0.071 n y n ruditapes_c18357 ? 0.79 0 0.071 n y n ruditapes_c19158 ? 0.79 0 0.071 n y n ruditapes_c19163 ? 0.79 0 0.071 n y n ruditapes_c19592 ? 0.79 0 0.071 n y n ruditapes_c21673 ? 0.79 8r-lipoxygenase-allene oxide synthase fusion protein 0 0.071 n y n ruditapes_c21742 ? 0.79 0 0.071 n y n ruditapes_c25535 ? 0.79 0 0.071 n y n ruditapes_c27064 ? 0.79 0 0.071 n y n ruditapes_c28447 ? 0.79 0 0.071 n y n ruditapes_c6792 ? 0.79 0 0.071 n y n ruditapes_c7877 ? 0.79 agap007489- partial 0 0.071 n y n ruditapes_c9645 ? 0.79 0 0.071 n y n ruditapes_lrc34278 ? 0.79 0 0.071 n y n ruditapes_lrc34959 ? 0.79 bdef_tactr ame: full=big defensin flags: precursor 0 0.071 n y n ruditapes_lrc38537 ? 0.79 0 0.071 n y n ruditapes_s35582 ? 0.79 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0 0.071 n y n ruditapes_s37606 ? 0.79 prostaglandin d synthase-like 0 0.071 n y n ruditapes_s37722 ? 0.79 0 0.071 n y n ruditapes_c28714 -4.448 0.79 0.146 0.033 n y n ruditapes_c11757 -? 0.79 0.071 0 n y n ruditapes_c16861 -? 0.79 0.071 0 n y n ruditapes_c28468 -? 0.79 0.071 0 n y n ruditapes_c850 -1.135 0.791 lmp7-like protein /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 10.364 9.128 n n n ruditapes_c19715 -1.148 0.791 8.734 7.605 n n n ruditapes_c10863 1.151 0.791 splicing arginine serine-rich 7 /// 0005488 // binding 5.982 6.887 n n n ruditapes2_c4764 -1.178 0.791 transport protein sec61 subunit beta "/// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation /// 0008565 // protein transporter activity /// 0005784 // translocon complex" 6.186 5.25 n n n ruditapes_c10270 -1.191 0.791 5.453 4.579 n n n ruditapes2_c2169 -1.275 0.791 2.854 2.238 n n n ruditapes_c16772 -1.291 0.791 2.585 2.002 n n n ruditapes_c8807 -1.323 0.791 2.169 1.639 n n n ruditapes_c684 -1.326 0.791 2.141 1.614 n n n ruditapes_lrc34901 1.417 0.791 0.943 1.336 n n n ruditapes_c21827 -1.374 0.791 1.717 1.25 n n n ruditapes_c4976 1.574 0.791 0.532 0.837 n y n ruditapes_c30638 -1.483 0.791 1.145 0.772 n n n ruditapes2_c1893 1.649 0.791 0.431 0.71 n y n ruditapes_c16605 1.709 0.791 0.368 0.629 n y n ruditapes_c13597 1.799 0.791 0.3 0.54 n y n ruditapes2_c2389 -1.617 0.791 0.805 0.498 n y n ruditapes_c17550 2.024 0.791 kiaa1688 protein 0.198 0.402 n y n ruditapes_c856 -1.747 0.791 0.617 0.353 n y n ruditapes_c18960 -1.906 0.791 0.485 0.255 n y n ruditapes2_lrc5382 -1.906 0.791 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0007596 // blood coagulation /// 0016787 // hydrolase activity 0.484 0.254 n y n ruditapes_c13618 ? 0.791 0 0.071 n y n ruditapes_c17199 ? 0.791 0 0.071 n y n ruditapes_c17828 ? 0.791 0 0.071 n y n ruditapes_c27290 ? 0.791 0 0.071 n y n ruditapes2_c1849 ? 0.791 0 0.07 n y n ruditapes_c11796 ? 0.791 0 0.07 n y n ruditapes_c12058 ? 0.791 0 0.07 n y n ruditapes_c12439 ? 0.791 0 0.07 n y n ruditapes_c16260 ? 0.791 0 0.07 n y n ruditapes_c18514 ? 0.791 0 0.07 n y n ruditapes_c18728 ? 0.791 0 0.07 n y n ruditapes_c18764 ? 0.791 0 0.07 n y n ruditapes_c18878 ? 0.791 0 0.07 n y n ruditapes_c18948 ? 0.791 0 0.07 n y n ruditapes_c19499 ? 0.791 0 0.07 n y n ruditapes_c23273 ? 0.791 0 0.07 n y n ruditapes_c25150 ? 0.791 0 0.07 n y n ruditapes_c31585 ? 0.791 0 0.07 n y n ruditapes_c484 ? 0.791 0 0.07 n y n ruditapes_c9923 ? 0.791 0 0.07 n y n ruditapes_lrc34704 ? 0.791 0 0.07 n y n ruditapes_lrc38519 ? 0.791 0 0.07 n y n ruditapes_c10216 -? 0.791 0.07 0 n y n ruditapes_lrc32633 -? 0.791 protein 0.07 0 n y n ruditapes_lrc39501 -? 0.791 0.07 0 n y n ruditapes_s36439 -? 0.791 nadh dehydrogenase 1 beta 12kda 0.07 0 n y n ruditapes_c9968 1.09 0.792 15.357 16.744 n n n ruditapes_c29892 -1.144 0.792 9.096 7.952 n n n ruditapes_c13136 1.159 0.792 5.484 6.354 n n n ruditapes_c7860 -1.186 0.792 5.629 4.747 n n n ruditapes_c8754 -1.219 0.792 4.201 3.445 n n n ruditapes_lrc32058 -1.297 0.792 metallothionein 2.463 1.899 n n n ruditapes_c17730 -1.305 0.792 tetraspanin isoform a 2.369 1.815 n n n ruditapes_c4638 -1.315 0.792 2.228 1.694 n n n ruditapes_c5456 -1.419 0.792 1.406 0.991 n n n ruditapes_c21494 1.649 0.792 0.427 0.704 n y n ruditapes_c9879 -1.57 0.792 hypothetical protein BRAFLDRAFT_103567 [Branchiostoma floridae] 0.893 0.569 n y n ruditapes2_c1443 1.889 0.792 nuclear lim interactor-interacting 0.25 0.473 n y n ruditapes_c13814 -1.819 0.792 0.543 0.298 n y n ruditapes2_lrc4565 -1.853 0.792 0.514 0.277 n y n ruditapes_c19199 -1.906 0.792 0.48 0.252 n y n ruditapes_c24162 -1.906 0.792 0.477 0.25 n y n ruditapes_c3815 -1.977 0.792 atpase mitochondrial 0.439 0.222 n y n ruditapes_c15347 3.148 0.792 hydroxysteroid (17-beta) dehydrogenase 6 homolog "/// 0031018 // endocrine pancreas development /// 0035118 // embryonic pectoral fin morphogenesis /// 0030855 // epithelial cell differentiation /// 0035050 // embryonic heart tube development /// 0031017 // exocrine pancreas development /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0001501 // skeletal system development /// 0004745 // retinol dehydrogenase activity /// 0042574 // retinal metabolic process /// 0008209 // androgen metabolic process /// 0033764 // steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" 0.062 0.195 n y n ruditapes_c10515 -2.224 0.792 0.337 0.152 n y n ruditapes_c11064 -2.965 0.792 toll-like receptor 13 0.215 0.072 n y n ruditapes_c8260 -2.965 0.792 0.214 0.072 n y n ruditapes_c9161 -2.965 0.792 0.213 0.072 n y n ruditapes_c11262 ? 0.792 0 0.07 n y n ruditapes_c15002 ? 0.792 0 0.07 n y n ruditapes_c17589 ? 0.792 0 0.07 n y n ruditapes_c19055 ? 0.792 0 0.07 n y n ruditapes_c23654 ? 0.792 neudesin precursor 0 0.07 n y n ruditapes_c25071 ? 0.792 0 0.07 n y n ruditapes_lrc18641 ? 0.792 0 0.07 n y n ruditapes2_c2618 ? 0.792 0 0.069 n y n ruditapes2_lrc5087 ? 0.792 0 0.069 n y n ruditapes_c10531 ? 0.792 0 0.069 n y n ruditapes_c27109 ? 0.792 0 0.069 n y n ruditapes_c4252 ? 0.792 0 0.069 n y n ruditapes_s37142 ? 0.792 0 0.069 n y n ruditapes2_c1110 -3.336 0.792 gastric intrinsic factor 0.185 0.056 n y n ruditapes_c13940 -4.448 0.792 0.142 0.032 n y n ruditapes2_c542 -? 0.792 protein /// 0005488 // binding 0.07 0 n y n ruditapes_lrc11916 -? 0.792 0.07 0 n y n ruditapes2_c594 -1.168 0.793 mitogen-activated protein kinase kinase 1-interacting protein 1 /// 0019209 // kinase activator activity /// 0005515 // protein binding /// 0000186 // activation of MAPKK activity /// 0005770 // late endosome 6.772 5.797 n n n ruditapes2_c6192 1.176 0.793 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 4.446 5.229 n n n ruditapes2_c928 -1.18 0.793 nuclear dna-binding protein "/// 0003714 // transcription corepressor activity /// 0016922 // ligand-dependent nuclear receptor binding /// 0017053 // transcriptional repressor complex /// 0006139 // nucleobase, nucleoside, nucleotide and nucleic acid metabolic process /// 0010467 // gene expression /// 0003677 // DNA binding /// 0034960 // cellular biopolymer metabolic process" 5.953 5.045 n n n ruditapes2_c5502 1.219 0.793 2.968 3.619 n n n ruditapes_c11950 -1.275 0.793 2.785 2.184 n n n ruditapes_c13000 1.304 0.793 1.625 2.119 n n n ruditapes_c13850 -1.293 0.793 2.497 1.931 n n n ruditapes_lrc30773 1.349 0.793 1.271 1.715 n n n ruditapes_c10931 -1.324 0.793 larp7 protein 2.112 1.595 n n n ruditapes_c1819 1.368 0.793 cathepsin b /// 0005739 // mitochondrion /// 0006508 // proteolysis /// 0005515 // protein binding /// 0005764 // lysosome /// 0042470 // melanosome /// 0050790 // regulation of catalytic activity /// 0004197 // cysteine-type endopeptidase activity 1.156 1.582 n n n ruditapes_c23877 -1.4 0.793 1.509 1.078 n n n ruditapes_c24544 1.478 0.793 0.722 1.066 n n n ruditapes2_c677 -1.423 0.793 1.373 0.965 n n n ruditapes_c13734 1.574 0.793 telomerase-associated protein 1 /// 0004437 // inositol or phosphatidylinositol phosphatase activity /// 0016043 // cellular component organization /// 0044238 // primary metabolic process /// 0005488 // binding /// 0043229 // intracellular organelle /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process /// 0034960 // cellular biopolymer metabolic process 0.523 0.823 n y n ruditapes_c30378 1.799 0.793 0.295 0.531 n y n ruditapes_c28454 1.799 0.793 0.294 0.529 n y n ruditapes_c19104 1.949 0.793 0.221 0.431 n y n ruditapes_c28036 2.248 0.793 0.142 0.319 n y n ruditapes_c4856 2.398 0.793 0.118 0.284 n y n ruditapes_c21491 2.698 0.793 PREDICTED: similar to ENSANGP00000014729 [Nasonia vitripennis] 0.088 0.236 n y n ruditapes_s36058 2.698 0.793 0.088 0.236 n y n ruditapes_s39901 -2.224 0.793 0.335 0.151 n y n ruditapes_c4734 -2.224 0.793 heat shock protein 0.334 0.15 n y n ruditapes2_c2129 ? 0.793 0 0.069 n y n ruditapes2_c2165 ? 0.793 0 0.069 n y n ruditapes_c12112 ? 0.793 0 0.069 n y n ruditapes_c12847 ? 0.793 0 0.069 n y n ruditapes_c14261 ? 0.793 0 0.069 n y n ruditapes_c15022 ? 0.793 0 0.069 n y n ruditapes_c16187 ? 0.793 0 0.069 n y n ruditapes_c16954 ? 0.793 fibropellin partial 0 0.069 n y n ruditapes_c1748 ? 0.793 unknown protein 9 [Haliotis diversicolor] 0 0.069 n y n ruditapes_c18261 ? 0.793 0 0.069 n y n ruditapes_c19675 ? 0.793 0 0.069 n y n ruditapes_c20438 ? 0.793 0 0.069 n y n ruditapes_c22717 ? 0.793 0 0.069 n y n ruditapes_c22846 ? 0.793 0 0.069 n y n ruditapes_c23648 ? 0.793 0 0.069 n y n ruditapes_c24883 ? 0.793 0 0.069 n y n ruditapes_c26941 ? 0.793 0 0.069 n y n ruditapes_c27592 ? 0.793 0 0.069 n y n ruditapes_c28487 ? 0.793 0 0.069 n y n ruditapes_c6255 ? 0.793 putative uromodulin [Mytilus galloprovincialis] 0 0.069 n y n ruditapes_lrc34818 ? 0.793 0 0.069 n y n ruditapes_lrc37796 ? 0.793 glutathione s-transferase 0 0.069 n y n ruditapes_c21745 -3.336 0.793 0.183 0.055 n y n ruditapes_c15939 -? 0.793 0.069 0 n y n ruditapes_c6672 -? 0.793 0.069 0 n y n ruditapes_c7492 -1.097 0.794 19.198 17.495 n n n ruditapes_c21530 1.092 0.794 14.669 16.014 n n n ruditapes_c5247 -1.143 0.794 cathepsin d /// 0009617 // response to bacterium /// 0004190 // aspartic-type endopeptidase activity /// 0006508 // proteolysis /// 0005764 // lysosome 9.081 7.947 n n n ruditapes_c29141 1.187 0.794 3.967 4.708 n n n ruditapes_c31205 -1.192 0.794 5.188 4.351 n n n ruditapes_c11859 -1.208 0.794 4.525 3.746 n n n ruditapes2_c224 -1.268 0.794 zinc finger protein 593 /// 0003676 // nucleic acid binding /// 0008270 // zinc ion binding /// 0005622 // intracellular 2.907 2.293 n n n ruditapes_c11781 -1.285 0.794 2.597 2.021 n n n ruditapes_c23935 1.349 0.794 1.252 1.689 n n n ruditapes_c17727 -1.334 0.794 sjchgc07766 protein 1.993 1.494 n n n ruditapes_c25908 -1.334 0.794 1.984 1.487 n n n ruditapes_c21977 -1.39 0.794 1.55 1.115 n n n ruditapes_c28355 -1.415 0.794 1.406 0.993 n n n ruditapes_c17307 -1.483 0.794 1.119 0.755 n n n ruditapes_c15310 -1.617 0.794 0.777 0.48 n y n ruditapes_c20841 1.949 0.794 0.22 0.428 n y n ruditapes_c3766 2.069 0.794 0.18 0.372 n y n ruditapes_c16785 2.099 0.794 0.171 0.36 n y n ruditapes_lrc38230 -1.73 0.794 0.617 0.357 n y n ruditapes_c29795 -1.853 0.794 0.506 0.273 n y n ruditapes_c15701 -1.906 0.794 0.472 0.247 n y n ruditapes_c16724 -1.906 0.794 0.471 0.247 n y n ruditapes2_lrc6031 -2.224 0.794 predicted protein [Nematostella vectensis] 0.332 0.149 n y n ruditapes_s36937 -2.224 0.794 0.332 0.149 n y n ruditapes_lrc38544 -2.224 0.794 0.331 0.149 n y n ruditapes_c19355 -2.224 0.794 0.33 0.148 n y n ruditapes_lrc18054 -2.224 0.794 0.33 0.148 n y n ruditapes_c18238 ? 0.794 0 0.068 n y n ruditapes_c18917 ? 0.794 0 0.068 n y n ruditapes_c21453 ? 0.794 0 0.068 n y n ruditapes_c21790 ? 0.794 0 0.068 n y n ruditapes_c22564 ? 0.794 0 0.068 n y n ruditapes_c25190 ? 0.794 0 0.068 n y n ruditapes_lrc32623 ? 0.794 metal-binding protein 0 0.068 n y n ruditapes2_c2004 -? 0.794 0.068 0 n y n ruditapes2_c455 -? 0.794 0.068 0 n y n ruditapes2_lrc3310 -? 0.794 0.068 0 n y n ruditapes2_lrc3383 -? 0.794 0.068 0 n y n ruditapes2_lrc6673 -? 0.794 mitochondrial cytochrome c oxidase subunit 6b /// 0005739 // mitochondrion 0.068 0 n y n ruditapes_c13503 -? 0.794 0.068 0 n y n ruditapes_c28868 -? 0.794 0.068 0 n y n ruditapes_c8800 -? 0.794 0.068 0 n y n ruditapes_lrc10289 -? 0.794 0.068 0 n y n ruditapes_lrc35993 -? 0.794 0.068 0 n y n ruditapes_c1360 -1.075 0.795 32.255 29.997 n n n ruditapes_c22800 1.101 0.795 12.02 13.238 n n n ruditapes_lrc36436 -1.135 0.795 beta-tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 9.955 8.77 n n n ruditapes_c26415 -1.17 0.795 6.445 5.507 n n n ruditapes_c17189 -1.216 0.795 dnase domain containing 3 /// 0016787 // hydrolase activity 4.175 3.433 n n n ruditapes_c20036 -1.218 0.795 4.107 3.373 n n n ruditapes_c6787 -1.22 0.795 4.051 3.32 n n n ruditapes_lrc33700 1.273 0.795 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 1.957 2.49 n n n ruditapes_c15056 -1.297 0.795 2.404 1.853 n n n ruditapes_c7065 -1.305 0.795 2.308 1.769 n n n ruditapes_c29937 1.349 0.795 1.251 1.687 n n n ruditapes_c18355 -1.316 0.795 2.16 1.641 n n n ruditapes_c8935 -1.334 0.795 1.976 1.481 n n n ruditapes_c13733 1.384 0.795 1.052 1.455 n n n ruditapes_lrc33554 -1.374 0.795 kda midgut partial 1.65 1.202 n n n ruditapes_c19263 -1.395 0.795 1.497 1.073 n n n ruditapes_lrc28875 1.484 0.795 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity 0.69 1.024 n n n ruditapes2_lrc4803 -1.415 0.795 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 1.391 0.983 n n n ruditapes_c7615 -1.512 0.795 1.008 0.666 n y n ruditapes_c22121 -1.668 0.795 0.688 0.412 n y n ruditapes_c5394 2.024 0.795 beta-ig-h3 fasciclin 0.191 0.386 n y n ruditapes_s35999 2.698 0.795 0.086 0.231 n y n ruditapes_c11360 3.148 0.795 0.06 0.189 n y n ruditapes2_lrc7040 -2.224 0.795 acyl carrier mitochondrial precursor 0.327 0.147 n y n ruditapes_c10203 ? 0.795 vitelline membrane outer layer 1 homolog 0 0.068 n y n ruditapes_c16329 ? 0.795 0 0.068 n y n ruditapes_c27766 ? 0.795 0 0.068 n y n ruditapes_s37456 ? 0.795 glutathione s-transferase 0 0.068 n y n ruditapes_c11517 ? 0.795 0 0.067 n y n ruditapes_c15152 ? 0.795 0 0.067 n y n ruditapes_c17287 ? 0.795 0 0.067 n y n ruditapes_c17543 ? 0.795 0 0.067 n y n ruditapes_c22973 ? 0.795 0 0.067 n y n ruditapes_c9715 ? 0.795 0 0.067 n y n ruditapes_lrc16433 ? 0.795 0 0.067 n y n ruditapes_c21909 -3.336 0.795 0.18 0.054 n y n ruditapes_c16494 -4.448 0.795 0.139 0.031 n y n ruditapes2_lrc4401 -? 0.795 keratin associated protein 19-3 0.068 0 n y n ruditapes2_c4105 1.011 0.796 60s acidic ribosomal protein p2 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0003735 // structural constituent of ribosome 417.314 421.954 n n n ruditapes2_c1277 1.128 0.796 7.753 8.747 n n n ruditapes_c30298 -1.139 0.796 9.365 8.222 n n n ruditapes2_c2312 -1.168 0.796 6.566 5.623 n n n ruditapes2_c1977 -1.193 0.796 5.057 4.239 n n n ruditapes_c15102 1.223 0.796 2.787 3.409 n n n ruditapes2_lrc5135 1.285 0.796 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.79 2.299 n n n ruditapes_c18356 1.384 0.796 1.037 1.434 n n n ruditapes_c22636 1.405 0.796 0.944 1.327 n n n ruditapes_lrc11940 1.424 0.796 0.865 1.232 n n n ruditapes_c27370 1.63 0.796 ga19517-pa 0.431 0.702 n y n ruditapes_c24592 -1.54 0.796 0.928 0.603 n y n ruditapes_c21405 2.698 0.796 0.085 0.229 n y n ruditapes_lrc34194 3.597 0.796 heat shock protein 22 isoform 1 0.045 0.162 n y n ruditapes_c22130 -2.224 0.796 0.326 0.146 n y n ruditapes_c24025 -2.224 0.796 0.325 0.146 n y n ruditapes_lrc33282 -2.224 0.796 predicted protein [Nematostella vectensis] 0.325 0.146 n y n ruditapes_c10995 -2.224 0.796 0.324 0.146 n y n ruditapes_lrc19914 -2.224 0.796 0.324 0.146 n y n ruditapes_lrc33306 -2.669 0.796 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity 0.238 0.089 n y n ruditapes_c106 ? 0.796 carbohydrate (chondroitin 6) sulfotransferase 3 /// 0008459 // chondroitin 6-sulfotransferase activity /// 0051272 // positive regulation of cell motion /// 0030206 // chondroitin sulfate biosynthetic process /// 0014012 // axon regeneration in the peripheral nervous system /// 0050698 // proteoglycan sulfotransferase activity 0 0.067 n y n ruditapes_c11548 ? 0.796 transmembrane protein 8 (five membrane-spanning domains) 0 0.067 n y n ruditapes_c12243 ? 0.796 0 0.067 n y n ruditapes_c17994 ? 0.796 0 0.067 n y n ruditapes_c23601 ? 0.796 dicarbonyl l-xylulose reductase /// 0006739 // NADP metabolic process /// 0051262 // protein tetramerization /// 0005902 // microvillus /// 0004090 // carbonyl reductase (NADPH) activity /// 0005903 // brush border /// 0043621 // protein self-association /// 0005997 // xylulose metabolic process 0 0.067 n y n ruditapes_c24375 ? 0.796 type alpha isoform cra_b 0 0.067 n y n ruditapes_lrc36288 ? 0.796 0 0.067 n y n ruditapes_s39578 ? 0.796 galactoside- 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0 0.067 n y n ruditapes_c10491 -3.336 0.796 0.178 0.053 n y n ruditapes_c11450 -? 0.796 0.067 0 n y n ruditapes_c15959 -? 0.796 0.067 0 n y n ruditapes_c5202 -1.051 0.797 death-associated protein 74.595 70.992 n n n ruditapes_c17566 -1.086 0.797 23.922 22.019 n n n ruditapes_c28739 1.117 0.797 9.117 10.185 n n n ruditapes_c18624 -1.18 0.797 peroxisomal trans-2-enoyl- reductase 5.708 4.836 n n n ruditapes_c9328 1.189 0.797 3.76 4.471 n n n ruditapes_c18633 1.196 0.797 3.541 4.234 n n n ruditapes_lrc14680 -1.235 0.797 3.522 2.851 n n n ruditapes_c8042 1.267 0.797 transmembrane protein 103 1.983 2.513 n n n ruditapes_c30733 1.349 0.797 1.221 1.648 n n n ruditapes2_c2005 -1.334 0.797 1.929 1.446 n n n ruditapes2_lrc3499 -1.349 0.797 1.801 1.335 n n n ruditapes_c23904 1.431 0.797 0.832 1.191 n n n ruditapes_lrc34781 -1.415 0.797 glutathione s-transferase /// 0004364 // glutathione transferase activity 1.368 0.967 n n n ruditapes_c8572 -1.43 0.797 angiopoietin-like 2 1.293 0.904 n n n ruditapes_c10211 -1.433 0.797 type alpha 2 1.275 0.89 n n n ruditapes_c1246 -1.457 0.797 ubiquitin-like 5 /// 0019941 // modification-dependent protein catabolic process /// 0005737 // cytoplasm /// 0006464 // protein modification process 1.179 0.809 n n n ruditapes_c3743 1.574 0.797 0.501 0.789 n y n ruditapes_c9107 -1.483 0.797 domain protein jellyroll fold domain protein 1.082 0.73 n n n ruditapes_lrc35841 1.799 0.797 0.284 0.511 n y n ruditapes_c706 2.248 0.797 0.136 0.307 n y n ruditapes2_c453 -1.831 0.797 0.507 0.277 n y n ruditapes_c22886 2.698 0.797 0.084 0.226 n y n ruditapes_s40223 2.698 0.797 0.084 0.226 n y n ruditapes_lrc33719 2.698 0.797 0.084 0.225 n y n ruditapes_lrc28022 3.597 0.797 0.045 0.161 n y n ruditapes_c23676 -2.224 0.797 0.321 0.144 n y n ruditapes_c10415 -2.669 0.797 0.236 0.088 n y n ruditapes2_c3492 ? 0.797 0 0.066 n y n ruditapes_c13873 ? 0.797 0 0.066 n y n ruditapes_c15794 ? 0.797 tao kinase 2 0 0.066 n y n ruditapes_c17249 ? 0.797 0 0.066 n y n ruditapes_c20756 ? 0.797 three prime repair exonuclease 1 0 0.066 n y n ruditapes_c26684 ? 0.797 0 0.066 n y n ruditapes_c7201 ? 0.797 0 0.066 n y n ruditapes_c8939 ? 0.797 0 0.066 n y n ruditapes_c8942 ? 0.797 0 0.066 n y n ruditapes2_c150 -? 0.797 proteinase inhibitor kazal 0.066 0 n y n ruditapes2_c2394 -? 0.797 0.066 0 n y n ruditapes_lrc34118 -? 0.797 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0.066 0 n y n ruditapes2_c3891 -1.064 0.798 44.032 41.376 n n n ruditapes2_lrc4773 -1.107 0.798 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 15.261 13.785 n n n ruditapes2_c2362 1.182 0.798 methyltransferase type 12 /// 0016740 // transferase activity 3.983 4.708 n n n ruditapes_lrc20076 -1.197 0.798 4.783 3.995 n n n ruditapes_c28116 -1.216 0.798 growth arrest-specific 8 /// 0008285 // negative regulation of cell proliferation /// 0005929 // cilium /// 0005794 // Golgi apparatus /// 0009434 // microtubule-based flagellum /// 0005515 // protein binding /// 0030317 // sperm motility /// 0005874 // microtubule 4.051 3.331 n n n ruditapes_c24062 -1.228 0.798 3.667 2.986 n n n ruditapes_c1110 -1.264 0.798 heat shock 70kd protein 12b 2.834 2.242 n n n ruditapes_c14551 -1.276 0.798 2.653 2.079 n n n ruditapes_c17821 1.349 0.798 1.211 1.634 n n n ruditapes_c13925 -1.314 0.798 2.117 1.611 n n n ruditapes2_c2672 -1.359 0.798 hypothetical protein BRAFLDRAFT_105615 [Branchiostoma floridae] 1.706 1.255 n n n ruditapes_c13003 -1.466 0.798 PREDICTED: hypothetical protein [Homo sapiens] 1.127 0.769 n n n ruditapes_c30704 -1.534 0.798 amp-dependent synthetase and ligase /// 0003824 // catalytic activity 0.921 0.6 n y n ruditapes_c16540 1.799 0.798 0.282 0.507 n y n ruditapes_c25944 -1.588 0.798 0.799 0.503 n y n ruditapes2_c3428 -1.747 0.798 0.574 0.328 n y n ruditapes_c11956 2.248 0.798 cation transport regulator homolog 2 ( coli) 0.135 0.304 n y n ruditapes_c13863 -1.819 0.798 hypothetical protein BRAFLDRAFT_80066 [Branchiostoma floridae] 0.511 0.281 n y n ruditapes_c11176 -1.819 0.798 0.51 0.28 n y n ruditapes2_c4752 2.473 0.798 0.104 0.257 n y n ruditapes_c18161 2.698 0.798 kazal-type serine protease inhibitor domain-containing protein 0.083 0.224 n y n ruditapes_c1371 2.698 0.798 0.083 0.223 n y n ruditapes2_lrc5740 ? 0.798 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0 0.066 n y n ruditapes_c15396 ? 0.798 0 0.066 n y n ruditapes_c16811 ? 0.798 0 0.066 n y n ruditapes_c11808 ? 0.798 0 0.065 n y n ruditapes_c12492 ? 0.798 0 0.065 n y n ruditapes_c16961 ? 0.798 0 0.065 n y n ruditapes_c19829 ? 0.798 0 0.065 n y n ruditapes_c6986 ? 0.798 mantle gene 6 0 0.065 n y n ruditapes_lrc17665 ? 0.798 0 0.065 n y n ruditapes_lrc39285 -4.448 0.798 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 0.134 0.03 n y n ruditapes_c24977 -? 0.798 0.066 0 n y n ruditapes_c7096 -? 0.798 zygote arrest 1 0.066 0 n y n ruditapes_c9336 -? 0.798 0.066 0 n y n ruditapes_c7802 -? 0.798 scavenger receptor cysteine-rich protein 0.065 0 n y n ruditapes_lrc33054 -? 0.798 protease inhibitor 0.065 0 n y n ruditapes2_c1461 1.106 0.799 10.596 11.723 n n n ruditapes_c1491 -1.185 0.799 5.311 4.481 n n n ruditapes_c9299 -1.213 0.799 kazal-type serine protease inhibitor domain containing protein 4.125 3.401 n n n ruditapes_c5989 -1.219 0.799 enoyl- mitochondrial /// 0005759 // mitochondrial matrix /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0005515 // protein binding /// 0006631 // fatty acid metabolic process /// 0004300 // enoyl-CoA hydratase activity 3.89 3.19 n n n ruditapes_c31208 -1.225 0.799 3.732 3.047 n n n ruditapes_c26823 1.254 0.799 2.138 2.68 n n n ruditapes_c21747 1.319 0.799 1.413 1.864 n n n ruditapes_c14407 -1.346 0.799 1.782 1.324 n n n ruditapes_c29517 -1.35 0.799 polyunsaturated fatty acid elongase 1.748 1.295 n n n ruditapes_c15312 -1.39 0.799 1.479 1.064 n n n ruditapes_c10411 1.478 0.799 0.678 1.002 n n n ruditapes_c15543 -1.404 0.799 1.399 0.996 n n n ruditapes_c12725 -1.445 0.799 mitochondrial ribosomal protein l12 "/// 0045893 // positive regulation of transcription, DNA-dependent /// 0005762 // mitochondrial large ribosomal subunit /// 0005515 // protein binding /// 0006390 // transcription from mitochondrial promoter /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome" 1.198 0.829 n n n ruditapes_lrc25145 1.799 0.799 0.279 0.502 n y n ruditapes_c28976 -1.631 0.799 0.719 0.441 n y n ruditapes_c5036 1.949 0.799 nephroblastoma overexpressed gene 0.21 0.408 n y n ruditapes_lrc32276 2.099 0.799 60s ribosomal protein l13a /// 0015934 // large ribosomal subunit /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.164 0.345 n y n ruditapes_c9453 -1.779 0.799 0.542 0.305 n y n ruditapes_c25985 -1.779 0.799 0.541 0.304 n y n ruditapes_c26858 -1.946 0.799 0.421 0.217 n y n ruditapes_s39258 -2.224 0.799 glutathione s-transferase /// 0005515 // protein binding 0.316 0.142 n y n ruditapes2_lrc3382 ? 0.799 0 0.065 n y n ruditapes_c10525 ? 0.799 0 0.065 n y n ruditapes_c13036 ? 0.799 nicotinic acetylcholine receptor /// 0044425 // membrane part /// 0045202 // synapse /// 0006810 // transport /// 0005886 // plasma membrane /// 0005230 // extracellular ligand-gated ion channel activity /// 0004872 // receptor activity 0 0.065 n y n ruditapes_c13242 ? 0.799 0 0.065 n y n ruditapes_c23961 ? 0.799 0 0.065 n y n ruditapes_c24343 ? 0.799 0 0.065 n y n ruditapes_c25644 ? 0.799 g protein-coupled receptor 133 /// 0007166 // cell surface receptor linked signal transduction /// 0016021 // integral to membrane /// 0004930 // G-protein coupled receptor activity 0 0.065 n y n ruditapes_c2709 ? 0.799 0 0.065 n y n ruditapes_c28213 ? 0.799 0 0.065 n y n ruditapes_c7688 ? 0.799 isoform cra_a /// 0004556 // alpha-amylase activity /// 0005615 // extracellular space /// 0043169 // cation binding /// 0008152 // metabolic process /// 0007586 // digestion 0 0.065 n y n ruditapes_lrc35804 ? 0.799 0 0.065 n y n ruditapes_c8792 -? 0.799 0.065 0 n y n ruditapes_lrc35666 -? 0.799 0.065 0 n y n ruditapes_lrc6869 -? 0.799 0.065 0 n y n ruditapes_c22185 -1.129 0.8 10.352 9.17 n n n ruditapes2_c131 -1.153 0.8 7.563 6.561 n n n ruditapes_c19036 1.18 0.8 3.989 4.706 n n n ruditapes2_c546 -1.191 0.8 4.971 4.175 n n n ruditapes2_c2780 -1.191 0.8 4.938 4.145 n n n ruditapes_c14961 1.211 0.8 2.981 3.609 n n n ruditapes_c21593 -1.249 0.8 3.101 2.483 n n n ruditapes2_c2462 -1.256 0.8 2.941 2.342 n n n ruditapes2_c2272 1.28 0.8 1.765 2.259 n n n ruditapes_c12540 1.299 0.8 1.569 2.038 n n n ruditapes_lrc34046 1.308 0.8 malate dehydrogenase nad /// 0044237 // cellular metabolic process /// 0016491 // oxidoreductase activity /// 0005737 // cytoplasm 1.491 1.95 n n n ruditapes_c15482 1.313 0.8 1.446 1.899 n n n ruditapes_c29956 1.349 0.8 1.18 1.592 n n n ruditapes_c17439 -1.328 0.8 cornifelin homolog a 1.931 1.454 n n n ruditapes_c9370 1.396 0.8 0.941 1.315 n n n ruditapes_c22801 -1.35 0.8 1.739 1.288 n n n ruditapes_c25917 1.445 0.8 0.765 1.105 n n n ruditapes_c13967 1.461 0.8 0.715 1.045 n n n ruditapes_c12925 1.499 0.8 0.622 0.932 n n n ruditapes_c21817 -1.439 0.8 1.219 0.847 n n n ruditapes_c27572 -1.529 0.8 0.913 0.597 n y n ruditapes_lrc19844 -1.588 0.8 0.786 0.495 n y n ruditapes_c17552 2.698 0.8 0.081 0.22 n y n ruditapes_c5318 2.698 0.8 0.081 0.22 n y n ruditapes_c20886 2.698 0.8 pericentriolar material 1 /// 0006366 // transcription from RNA polymerase II promoter /// 0003700 // transcription factor activity /// 0003714 // transcription corepressor activity /// 0008327 // methyl-CpG binding /// 0051297 // centrosome organization /// 0046872 // metal ion binding /// 0016481 // negative regulation of transcription /// 0000242 // pericentriolar material /// 0005634 // nucleus /// 0034451 // centriolar satellite /// 0031513 // nonmotile primary cilium /// 0042384 // cilium assembly 0.081 0.219 n y n ruditapes2_lrc3459 3.597 0.8 stromal cell derived factor 2-like protein 0.043 0.156 n y n ruditapes_c15630 -2.224 0.8 0.313 0.141 n y n ruditapes2_c727 -2.224 0.8 0.312 0.14 n y n ruditapes_c22767 -2.224 0.8 0.311 0.14 n y n ruditapes_c34549 -2.224 0.8 0.311 0.14 n y n ruditapes_c2969 -2.78 0.8 inhibitor of apoptosis protein 0.216 0.078 n y n ruditapes_c9891 -2.965 0.8 pol polyprotein 0.198 0.067 n y n ruditapes2_c2121 -2.965 0.8 hypothetical protein BRAFLDRAFT_97410 [Branchiostoma floridae] 0.197 0.066 n y n ruditapes2_c1780 ? 0.8 0 0.064 n y n ruditapes2_lrc4587 ? 0.8 predicted protein [Nematostella vectensis] 0 0.064 n y n ruditapes_c15139 ? 0.8 0 0.064 n y n ruditapes_c22192 ? 0.8 hect domain containing 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0046872 // metal ion binding /// 0016740 // transferase activity /// 0016567 // protein ubiquitination /// 0005622 // intracellular /// 0004842 // ubiquitin-protein ligase activity 0 0.064 n y n ruditapes_c23931 ? 0.8 0 0.064 n y n ruditapes_c24142 ? 0.8 0 0.064 n y n ruditapes_c26841 ? 0.8 0 0.064 n y n ruditapes_c28221 ? 0.8 0 0.064 n y n ruditapes_c5288 ? 0.8 0 0.064 n y n ruditapes_c15247 -? 0.8 0.064 0 n y n ruditapes_c1743 -? 0.8 0.064 0 n y n ruditapes_c26524 -? 0.8 0.064 0 n y n ruditapes_c28841 -? 0.8 0.064 0 n y n ruditapes_c1946 1.123 0.801 cathepsin l 7.944 8.924 n n n ruditapes_c22433 1.241 0.801 2.322 2.88 n n n ruditapes_c29977 1.274 0.801 1.812 2.308 n n n ruditapes_c1380 -1.291 0.801 2.332 1.806 n n n ruditapes_c8217 -1.31 0.801 3-oxoacyl-acyl-carrier-protein reductase /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 2.104 1.607 n n n ruditapes_c17874 1.387 0.801 0.971 1.346 n n n ruditapes_c22749 -1.404 0.801 1.358 0.967 n n n ruditapes_c29360 -1.483 0.801 1.037 0.699 n n n ruditapes_c27619 1.799 0.801 0.273 0.49 n y n ruditapes_lrc36596 -1.668 0.801 GI19909 [Drosophila mojavensis] 0.652 0.391 n y n ruditapes_c6495 2.024 0.801 nucleoredoxin 1 0.18 0.364 n y n ruditapes_c1382 -1.8 0.801 "PREDICTED: similar to somatostatin receptor, putative [Hydra magnipapillata]" 0.514 0.285 n y n ruditapes_lrc32646 2.473 0.801 zgc:136279 protein 0.1 0.248 n y n ruditapes_c32923 -1.946 0.801 galactoside- soluble isoform cra_a 0.417 0.214 n y n ruditapes_c9305 -1.977 0.801 0.4 0.202 n y n ruditapes_lrc38495 -2.224 0.801 0.31 0.14 n y n ruditapes_lrc34947 -2.224 0.801 mitochondrial cytochrome c oxidase subunit 5a 0.31 0.139 n y n ruditapes_lrc39159 -2.224 0.801 0.31 0.139 n y n ruditapes_c21607 -2.224 0.801 0.309 0.139 n y n ruditapes_c1731 4.047 0.801 0.034 0.139 n y n ruditapes_s39130 -2.224 0.801 0.308 0.138 n y n ruditapes2_c1481 -2.965 0.801 0.196 0.066 n y n ruditapes_c13849 ? 0.801 0 0.064 n y n ruditapes_c16760 ? 0.801 0 0.064 n y n ruditapes_c20077 ? 0.801 0 0.064 n y n ruditapes_c2418 ? 0.801 developmental protein /// 0030154 // cell differentiation /// 0048513 // organ development 0 0.064 n y n ruditapes_c24449 ? 0.801 0 0.064 n y n ruditapes_c24702 ? 0.801 0 0.064 n y n ruditapes_lrc13332 ? 0.801 protein 0 0.064 n y n ruditapes_c12203 ? 0.801 0 0.063 n y n ruditapes_c15184 ? 0.801 0 0.063 n y n ruditapes_lrc38546 ? 0.801 predicted protein [Nematostella vectensis] 0 0.063 n y n ruditapes_c16008 -? 0.801 0.064 0 n y n ruditapes_lrc32852 -? 0.801 0.063 0 n y n ruditapes_c19325 1.202 0.802 3.141 3.775 n n n ruditapes_c1431 -1.308 0.802 aldose 1-epimerase 2.1 1.606 n n n ruditapes2_c2483 -1.311 0.802 hccs-prov protein 2.071 1.579 n n n ruditapes_c10075 1.349 0.802 protein 1.156 1.559 n n n ruditapes_c28496 1.379 0.802 relish 0.995 1.372 n n n ruditapes_c8979 -1.348 0.802 1.728 1.282 n n n ruditapes2_c2131 -1.483 0.802 1.03 0.695 n n n ruditapes_s34448 -1.483 0.802 1.03 0.694 n n n ruditapes_c9402 -1.483 0.802 1.026 0.692 n n n ruditapes_c23927 1.649 0.802 0.386 0.637 n y n ruditapes_c4754 -1.522 0.802 0.916 0.602 n y n ruditapes_c17974 -1.588 0.802 0.77 0.485 n y n ruditapes_c10656 1.799 0.802 0.269 0.484 n y n ruditapes_c17089 -1.606 0.802 0.735 0.458 n y n ruditapes_c2912 2.024 0.802 0.178 0.361 n y n ruditapes_lrc34363 2.024 0.802 developmentally-regulated vdg3 0.178 0.36 n y n ruditapes_s38217 2.024 0.802 0.178 0.359 n y n ruditapes_lrc34516 -1.711 0.802 0.593 0.347 n y n ruditapes_c21750 -1.73 0.802 complement component c3 0.57 0.33 n y n ruditapes2_c3276 -1.906 0.802 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0.431 0.226 n y n ruditapes_c31708 -2.224 0.802 0.307 0.138 n y n ruditapes_c12154 -2.224 0.802 predicted protein [Nematostella vectensis] 0.306 0.137 n y n ruditapes_lrc37978 -2.965 0.802 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.194 0.065 n y n ruditapes_c21775 ? 0.802 0 0.063 n y n ruditapes_c33182 ? 0.802 0 0.063 n y n ruditapes_c36084 ? 0.802 vitelline membrane outer layer 1 homolog 0 0.063 n y n ruditapes_c4076 ? 0.802 carboxypeptidase m14 0 0.063 n y n ruditapes_c8820 ? 0.802 0 0.063 n y n ruditapes2_lrc4814 -? 0.802 0.063 0 n y n ruditapes_c22301 -? 0.802 0.063 0 n y n ruditapes_c8176 -? 0.802 0.063 0 n y n ruditapes_c9509 -? 0.802 0.063 0 n y n ruditapes2_c776 1.053 0.803 35.771 37.657 n n n ruditapes2_c1777 -1.066 0.803 39.401 36.965 n n n ruditapes2_lrc2795 -1.115 0.803 12.549 11.254 n n n ruditapes_c27863 -1.146 0.803 8.021 7.001 n n n ruditapes_c22887 -1.149 0.803 7.62 6.63 n n n ruditapes_c2013 -1.221 0.803 c-myc binding protein "/// 0006355 // regulation of transcription, DNA-dependent /// 0005739 // mitochondrion /// 0003713 // transcription coactivator activity /// 0005634 // nucleus /// 0007283 // spermatogenesis" 3.723 3.05 n n n ruditapes_c18790 -1.222 0.803 3.666 3.001 n n n ruditapes_c30023 1.265 0.803 1.906 2.41 n n n ruditapes_c3226 -1.253 0.803 2.911 2.323 n n n ruditapes_c8894 -1.305 0.803 sap30 binding protein /// 0006350 // transcription /// 0005634 // nucleus /// 0005515 // protein binding /// 0006917 // induction of apoptosis 2.123 1.627 n n n ruditapes_c28688 1.349 0.803 1.145 1.544 n n n ruditapes_c17572 1.387 0.803 0.955 1.324 n n n ruditapes_c30827 -1.344 0.803 1.738 1.293 n n n ruditapes_c24993 -1.39 0.803 1.42 1.022 n n n ruditapes_c16576 1.461 0.803 0.694 1.014 n n n ruditapes_c21763 -1.4 0.803 1.364 0.974 n n n ruditapes_c30417 -1.457 0.803 1.104 0.758 n n n ruditapes_c7119 -1.483 0.803 chromosome 7 open reading frame 23 1.018 0.686 n n n ruditapes_c18966 1.686 0.803 hypothetical protein BRAFLDRAFT_223479 [Branchiostoma floridae] 0.348 0.587 n y n ruditapes2_lrc4890 -1.529 0.803 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.884 0.578 n y n ruditapes_c18475 -1.529 0.803 inhibitor of growth "/// 0008285 // negative regulation of cell proliferation /// 0006473 // protein amino acid acetylation /// 0005634 // nucleus /// 0045926 // negative regulation of growth /// 0005515 // protein binding /// 0006915 // apoptosis /// 0007050 // cell cycle arrest /// 0008270 // zinc ion binding /// 0045892 // negative regulation of transcription, DNA-dependent" 0.884 0.578 n y n ruditapes_lrc34682 -1.529 0.803 ribosomal protein s6 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0006955 // immune response 0.884 0.578 n y n ruditapes_c25977 -1.617 0.803 0.712 0.44 n y n ruditapes_c30196 -1.617 0.803 loc100145015 protein 0.71 0.439 n y n ruditapes_c22164 -1.668 0.803 0.64 0.384 n y n ruditapes_c18549 -1.73 0.803 0.564 0.326 n y n ruditapes_c24041 -1.853 0.803 0.462 0.249 n y n ruditapes_c24237 -2.224 0.803 0.302 0.136 n y n ruditapes2_c2456 ? 0.803 0 0.062 n y n ruditapes_c14352 ? 0.803 0 0.062 n y n ruditapes_c25635 ? 0.803 0 0.062 n y n ruditapes_c25822 ? 0.803 0 0.062 n y n ruditapes_c28927 ? 0.803 0 0.062 n y n ruditapes_c31982 ? 0.803 0 0.062 n y n ruditapes_c38351 ? 0.803 protein 0 0.062 n y n ruditapes_c9819 ? 0.803 0 0.062 n y n ruditapes_lrc34084 ? 0.803 angiopoietin-like 2 /// 0005576 // extracellular region 0 0.062 n y n ruditapes_lrc35374 ? 0.803 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0.062 n y n ruditapes_s37651 ? 0.803 eukaryotic translation elongation factor 1 beta 2 /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 0 0.062 n y n ruditapes_s37818 ? 0.803 0 0.062 n y n ruditapes_c116 -3.336 0.803 perlucin 8 0.167 0.05 n y n ruditapes_c29393 -3.336 0.803 0.166 0.05 n y n ruditapes2_c4847 -? 0.803 0.062 0 n y n ruditapes_c9174 -? 0.803 0.062 0 n y n ruditapes_s37771 -? 0.803 0.062 0 n y n ruditapes_c14677 -1.145 0.804 7.994 6.981 n n n ruditapes_c17664 -1.154 0.804 7.14 6.19 n n n ruditapes_c24908 1.179 0.804 von willebrand factor type egf and pentraxin domain containing 1 3.878 4.573 n n n ruditapes_c18788 -1.204 0.804 enolase /// 0005811 // lipid particle /// 0006096 // glycolysis /// 0000287 // magnesium ion binding /// 0004634 // phosphopyruvate hydratase activity /// 0000015 // phosphopyruvate hydratase complex 4.216 3.502 n n n ruditapes_c3620 -1.22 0.804 3.664 3.002 n n n ruditapes_lrc15083 1.31 0.804 peptidyl-prolyl cis-trans isomerase 1.411 1.849 n n n ruditapes_c17888 1.323 0.804 1.314 1.738 n n n ruditapes_c13810 1.325 0.804 cg1105 cg1105-pa 1.285 1.703 n n n ruditapes_c21789 1.349 0.804 1.132 1.528 n n n ruditapes_lrc34627 -1.398 0.804 1.361 0.974 n n n ruditapes_lrc23515 1.619 0.804 0.411 0.665 n y n ruditapes_c7904 1.63 0.804 0.397 0.647 n y n ruditapes_c23655 1.649 0.804 0.377 0.622 n y n ruditapes2_c2323 -1.557 0.804 0.815 0.523 n y n ruditapes_c4845 -1.588 0.804 thymosin isoform 2 0.752 0.473 n y n ruditapes_c25855 -1.711 0.804 vacuolar protein sorting 26 homolog b /// 0044464 // cell part 0.579 0.339 n y n ruditapes2_lrc4447 2.099 0.804 serine proteases and ovochymase regions 0.156 0.327 n y n ruditapes_c29574 -1.779 0.804 0.511 0.287 n y n ruditapes_c15991 -1.906 0.804 0.425 0.223 n y n ruditapes_lrc8720 -1.906 0.804 0.422 0.222 n y n ruditapes_c15075 -2.224 0.804 PREDICTED: hypothetical protein [Hydra magnipapillata] 0.301 0.135 n y n ruditapes_c29825 -2.224 0.804 0.3 0.135 n y n ruditapes_lrc15456 -2.224 0.804 acyl carrier mitochondrial precursor /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 0.3 0.135 n y n ruditapes_c11442 -2.224 0.804 0.298 0.134 n y n ruditapes_c16757 ? 0.804 0 0.062 n y n ruditapes_c24606 ? 0.804 0 0.061 n y n ruditapes_c3690 ? 0.804 calmodulin /// 0005524 // ATP binding /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 0 0.061 n y n ruditapes_c17910 -4.448 0.804 0.127 0.029 n y n ruditapes_c22903 -4.448 0.804 0.127 0.029 n y n ruditapes2_lrc3885 -4.448 0.804 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.126 0.028 n y n ruditapes_c15331 -? 0.804 imap family member 9 0.062 0 n y n ruditapes_c7182 -? 0.804 0.062 0 n y n ruditapes_lrc26831 -? 0.804 0.062 0 n y n ruditapes_c5488 -? 0.804 0.061 0 n y n ruditapes_c11223 1.07 0.805 21.39 22.881 n n n ruditapes_c24573 -1.087 0.805 21.748 20.015 n n n ruditapes_lrc34787 1.08 0.805 nascent polypeptide-associated complex subunit alpha /// 0006412 // translation /// 0005854 // nascent polypeptide-associated complex /// 0016787 // hydrolase activity 16.5 17.828 n n n ruditapes_lrc34522 1.083 0.805 ribosomal protein l38 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 15.769 17.076 n n n ruditapes2_c2411 1.115 0.805 8.56 9.547 n n n ruditapes_c2026 -1.128 0.805 9.979 8.845 n n n ruditapes_c18346 1.126 0.805 mitochondrial malate dehydrogenase nad "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0044237 // cellular metabolic process /// 0044429 // mitochondrial part /// 0016615 // malate dehydrogenase activity" 7.347 8.271 n n n ruditapes_c7248 -1.168 0.805 coatomer protein subunit beta 1 "/// 0048205 // COPI coating of Golgi vesicle /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER /// 0005198 // structural molecule activity /// 0006886 // intracellular protein transport /// 0006891 // intra-Golgi vesicle-mediated transport /// 0005515 // protein binding /// 0005829 // cytosol /// 0030126 // COPI vesicle coat" 5.957 5.1 n n n ruditapes_c31200 1.199 0.805 3.152 3.78 n n n ruditapes_c30771 -1.199 0.805 myosin heavy chain /// 0044446 // intracellular organelle part /// 0043232 // intracellular non-membrane-bounded organelle 4.371 3.646 n n n ruditapes_c13324 1.237 0.805 2.29 2.831 n n n ruditapes_lrc14327 -1.264 0.805 2.642 2.089 n n n ruditapes_c16607 1.289 0.805 1.58 2.037 n n n ruditapes_lrc24453 -1.277 0.805 2.442 1.912 n n n ruditapes_c28141 -1.334 0.805 1.775 1.331 n n n ruditapes2_c2020 1.381 0.805 0.955 1.32 n n n ruditapes_c20395 -1.363 0.805 1.55 1.137 n n n ruditapes_c3723 1.433 0.805 0.765 1.097 n n n ruditapes_lrc33319 -1.377 0.805 1.466 1.065 n n n ruditapes_c17015 -1.423 0.805 1.217 0.855 n n n ruditapes2_lrc5864 -1.445 0.805 1.125 0.779 n n n ruditapes_c21024 1.574 0.805 0.461 0.726 n y n ruditapes_c18719 -1.483 0.805 0.994 0.671 n n n ruditapes2_c1581 -1.617 0.805 0.697 0.431 n y n ruditapes2_lrc6896 -1.668 0.805 0.627 0.376 n y n ruditapes2_c2821 2.024 0.805 0.174 0.351 n y n ruditapes_c22472 -1.73 0.805 0.551 0.319 n y n ruditapes_c13913 -1.946 0.805 agrin 0.4 0.206 n y n ruditapes_c10600 3.597 0.805 0.041 0.149 n y n ruditapes2_c3042 -2.224 0.805 0.298 0.134 n y n ruditapes_c24055 -2.224 0.805 0.297 0.134 n y n ruditapes_c18092 -2.224 0.805 0.297 0.133 n y n ruditapes_c13328 ? 0.805 0 0.061 n y n ruditapes_c13882 ? 0.805 niemann-pick type c1 domain-containing 0 0.061 n y n ruditapes_c16639 ? 0.805 0 0.061 n y n ruditapes_c24510 ? 0.805 0 0.061 n y n ruditapes_c30346 ? 0.805 0 0.061 n y n ruditapes_c6206 ? 0.805 0 0.061 n y n ruditapes_c7930 ? 0.805 0 0.061 n y n ruditapes_c8618 ? 0.805 novel protein 0 0.061 n y n ruditapes_lrc34020 ? 0.805 0 0.061 n y n ruditapes_lrc34714 ? 0.805 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0 0.061 n y n ruditapes_c6329 -3.336 0.805 0.162 0.049 n y n ruditapes2_c91 -4.448 0.805 0.125 0.028 n y n ruditapes2_lrc5767 -? 0.805 0.061 0 n y n ruditapes_c12494 -? 0.805 0.061 0 n y n ruditapes_c7583 -? 0.805 0.061 0 n y n ruditapes_lrc34182 1.04 0.806 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 57.333 59.599 n n n ruditapes_c17571 1.12 0.806 7.924 8.872 n n n ruditapes2_c205 -1.136 0.806 phospholipase b1 8.818 7.762 n n n ruditapes_c21478 1.131 0.806 6.724 7.607 n n n ruditapes_c11868 -1.183 0.806 isoform c 5.029 4.249 n n n ruditapes_c9221 -1.211 0.806 tpa_exp: replicase helicase endonuclease /// 0016787 // hydrolase activity 3.907 3.227 n n n ruditapes_c25006 -1.223 0.806 3.523 2.88 n n n ruditapes_c29402 -1.225 0.806 protein tyrosine receptor a isoform 1 /// 0043687 // post-translational protein modification /// 0005001 // transmembrane receptor protein tyrosine phosphatase activity /// 0005887 // integral to plasma membrane /// 0016311 // dephosphorylation 3.499 2.857 n n n ruditapes_c16996 -1.228 0.806 3.395 2.764 n n n ruditapes_c22718 1.249 0.806 2.05 2.561 n n n ruditapes_c24602 1.271 0.806 1.764 2.242 n n n ruditapes_c30146 1.279 0.806 1.672 2.139 n n n ruditapes_c9139 -1.305 0.806 2.054 1.574 n n n ruditapes_c16717 1.349 0.806 1.116 1.506 n n n ruditapes_c10721 1.377 0.806 0.965 1.329 n n n ruditapes_c9462 -1.348 0.806 1.657 1.229 n n n ruditapes_c24701 -1.483 0.806 0.99 0.668 n n n ruditapes_c13889 1.686 0.806 0.337 0.569 n y n ruditapes_c21714 1.799 0.806 tuftelin interacting protein 11 /// 0016607 // nuclear speck /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0009987 // cellular process /// 0005578 // proteinaceous extracellular matrix 0.259 0.466 n y n ruditapes_c7245 1.799 0.806 variable abnormal morphology family member (vab-10) 0.259 0.466 n y n ruditapes_c8452 -1.588 0.806 0.739 0.465 n y n ruditapes_lrc32723 -1.631 0.806 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.667 0.409 n y n ruditapes_s39496 2.024 0.806 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.171 0.346 n y n ruditapes_c21047 -1.73 0.806 0.55 0.318 n y n ruditapes_c12825 -1.906 0.806 0.417 0.219 n y n ruditapes_c22782 -2.224 0.806 0.293 0.132 n y n ruditapes_lrc38022 -2.224 0.806 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.292 0.131 n y n ruditapes_s39711 -2.224 0.806 0.292 0.131 n y n ruditapes_lrc39077 ? 0.806 0 0.061 n y n ruditapes_c27130 ? 0.806 0 0.06 n y n ruditapes_c28573 ? 0.806 0 0.06 n y n ruditapes_c645 ? 0.806 0 0.06 n y n ruditapes_c9359 ? 0.806 0 0.06 n y n ruditapes_c9390 ? 0.806 mannose c type 2 0 0.06 n y n ruditapes_lrc35251 -3.336 0.806 f-type h+-transporting atpase subunit f 0.161 0.048 n y n ruditapes_c28626 -? 0.806 0.061 0 n y n ruditapes_c1333 -? 0.806 0.06 0 n y n ruditapes_c10141 -1.117 0.807 11.658 10.438 n n n ruditapes_lrc14873 -1.134 0.807 8.931 7.875 n n n ruditapes2_c2505 1.13 0.807 fkbp-type peptidyl-prolyl /// 0044424 // intracellular part 6.686 7.558 n n n ruditapes_c22758 -1.144 0.807 7.846 6.859 n n n ruditapes_c18928 1.144 0.807 5.62 6.43 n n n ruditapes2_lrc7177 1.18 0.807 ribosomal protein l8e 3.674 4.337 n n n ruditapes_s34230 -1.181 0.807 5.054 4.278 n n n ruditapes_c11812 -1.205 0.807 4.087 3.393 n n n ruditapes_c16132 -1.209 0.807 3.929 3.251 n n n ruditapes2_lrc2902 -1.276 0.807 hypothetical protein VspiD_21970 [Verrucomicrobium spinosum DSM 4136] 2.401 1.882 n n n ruditapes_c10913 1.306 0.807 1.393 1.82 n n n ruditapes_c8700 -1.29 0.807 2.207 1.711 n n n ruditapes2_c2325 -1.334 0.807 1.747 1.309 n n n ruditapes_c16402 1.392 0.807 translocase of outer mitochondrial membrane 20 homolog /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0005742 // mitochondrial outer membrane translocase complex /// 0051082 // unfolded protein binding 0.898 1.25 n n n ruditapes_c19755 1.461 0.807 0.668 0.977 n n n ruditapes_c8766 -1.448 0.807 microsomal glutathione s-transferase 3 /// 0005624 // membrane fraction /// 0016740 // transferase activity /// 0010243 // response to organic nitrogen 1.088 0.751 n n n ruditapes_lrc37821 1.606 0.807 ribosomal protein sa /// 0005737 // cytoplasm 0.41 0.659 n y n ruditapes_c21438 1.619 0.807 0.396 0.641 n y n ruditapes2_c3066 -1.631 0.807 loc613274 protein 0.661 0.405 n y n ruditapes2_c1150 1.911 0.807 hypothetical protein TTHERM_00320180 [Tetrahymena thermophila] 0.206 0.394 n y n ruditapes_lrc19085 2.024 0.807 0.169 0.342 n y n ruditapes_c6010 -1.711 0.807 serum amyloid a 0.562 0.329 n y n ruditapes_c19239 -1.73 0.807 0.543 0.314 n y n ruditapes_c31049 -1.779 0.807 0.5 0.281 n y n ruditapes2_lrc4428 3.148 0.807 serine proteinase 0.053 0.167 n y n ruditapes_c26092 ? 0.807 type alpha 1 0 0.06 n y n ruditapes_c22752 -4.448 0.807 0.123 0.028 n y n ruditapes_c31237 -? 0.807 0.06 0 n y n ruditapes_lrc32744 -? 0.807 ly-6 neurotoxin-related protein 0.06 0 n y n ruditapes_lrc34570 -? 0.807 0.06 0 n y n ruditapes2_c2042 -? 0.807 0.059 0 n y n ruditapes2_c1861 -1.071 0.808 31.696 29.587 n n n ruditapes_c5218 1.069 0.808 ribosomal protein l5 /// 0030529 // ribonucleoprotein complex /// 0019843 // rRNA binding /// 0005737 // cytoplasm 21.47 22.943 n n n ruditapes2_c1794 -1.126 0.808 sterol regulatory element binding transcription factor 2 /// 0003700 // transcription factor activity /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0044444 // cytoplasmic part /// 0005634 // nucleus /// 0016020 // membrane /// 0005515 // protein binding /// 0003704 // specific RNA polymerase II transcription factor activity /// 0008610 // lipid biosynthetic process 10.007 8.886 n n n ruditapes_lrc17467 -1.271 0.808 tektin 4 /// 0005874 // microtubule /// 0000226 // microtubule cytoskeleton organization 2.469 1.943 n n n ruditapes_c11147 1.301 0.808 glycoside hydrolase family 10 /// 0003824 // catalytic activity 1.424 1.853 n n n ruditapes_c17126 -1.29 0.808 2.185 1.694 n n n ruditapes_c15479 -1.291 0.808 zinc dhhc-type containing 12 2.178 1.686 n n n ruditapes_c23214 1.349 0.808 1.093 1.475 n n n ruditapes2_c1856 -1.312 0.808 1.931 1.471 n n n ruditapes_c25499 1.349 0.808 1.085 1.464 n n n ruditapes_c7140 -1.39 0.808 1.35 0.972 n n n ruditapes_lrc10018 -1.445 0.808 1.096 0.758 n n n ruditapes2_c221 -1.483 0.808 zgc:136279 protein 0.965 0.651 n n n ruditapes_c22195 1.686 0.808 0.327 0.552 n y n ruditapes_c24793 -1.529 0.808 0.842 0.551 n y n ruditapes_c15674 2.024 0.808 0.167 0.338 n y n ruditapes_c14815 -1.73 0.808 0.535 0.309 n y n ruditapes_c26341 -1.73 0.808 0.535 0.309 n y n ruditapes2_lrc6265 2.248 0.808 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 0.122 0.274 n y n ruditapes_c5258 2.248 0.808 0.121 0.273 n y n ruditapes_c14451 -1.906 0.808 0.407 0.213 n y n ruditapes_c4288 2.698 0.808 0.075 0.202 n y n ruditapes_c7871 2.698 0.808 0.074 0.201 n y n ruditapes_c12845 3.148 0.808 0.053 0.166 n y n ruditapes_c559 3.148 0.808 0.053 0.165 n y n ruditapes_c31426 3.597 0.808 0.04 0.143 n y n ruditapes2_c1751 -2.224 0.808 0.286 0.129 n y n ruditapes_c17606 -2.224 0.808 0.286 0.129 n y n ruditapes2_c1378 ? 0.808 0 0.059 n y n ruditapes2_c2032 ? 0.808 wsc domain containing 1 0 0.059 n y n ruditapes_c20781 ? 0.808 0 0.059 n y n ruditapes_c26171 ? 0.808 0 0.059 n y n ruditapes_c8135 ? 0.808 0 0.059 n y n ruditapes_c9176 ? 0.808 0 0.059 n y n ruditapes_c16045 -? 0.808 0.059 0 n y n ruditapes_c16183 -? 0.808 0.059 0 n y n ruditapes_c18232 -? 0.808 0.059 0 n y n ruditapes_c19018 -? 0.808 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005737 // cytoplasm /// 0005997 // xylulose metabolic process" 0.059 0 n y n ruditapes_c24672 -? 0.808 0.059 0 n y n ruditapes_c8818 -? 0.808 0.059 0 n y n ruditapes_lrc31769 -? 0.808 0.059 0 n y n ruditapes_lrc33695 -? 0.808 0.059 0 n y n ruditapes_lrc34052 -? 0.808 sybindin-like family protein 0.059 0 n y n ruditapes_c16084 1.031 0.809 83.093 85.654 n n n ruditapes_c31768 1.036 0.809 66.23 68.586 n n n ruditapes_c12790 -1.098 0.809 16.127 14.681 n n n ruditapes_c10328 -1.181 0.809 4.986 4.221 n n n ruditapes_c24525 -1.218 0.809 3.578 2.938 n n n ruditapes_c11332 -1.218 0.809 3.557 2.921 n n n ruditapes2_c39 -1.219 0.809 calponin-like protein /// 0005515 // protein binding 3.531 2.897 n n n ruditapes_c16134 1.228 0.809 2.352 2.888 n n n ruditapes_c23294 1.247 0.809 alpha amylase "/// 0046872 // metal ion binding /// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0043169 // cation binding /// 0008152 // metabolic process" 2.038 2.541 n n n ruditapes_c4413 1.27 0.809 1.716 2.178 n n n ruditapes_c1657 1.274 0.809 calmodulin /// 0005488 // binding 1.677 2.136 n n n ruditapes_c12416 1.349 0.809 1.079 1.456 n n n ruditapes_c153 -1.39 0.809 protein 1.336 0.961 n n n ruditapes_c26336 -1.439 0.809 1.099 0.763 n n n ruditapes_c19493 -1.445 0.809 xl-incenp protein 1.077 0.745 n n n ruditapes_c18401 -1.45 0.809 1.061 0.732 n n n ruditapes_c19874 -1.461 0.809 1.017 0.696 n n n ruditapes_c8180 1.619 0.809 0.388 0.628 n y n ruditapes_lrc6923 -1.557 0.809 cytochrome c oxidase subunit viic 0.77 0.495 n y n ruditapes_c18215 2.024 0.809 0.165 0.335 n y n ruditapes_c12453 -1.73 0.809 0.531 0.307 n y n ruditapes_c8922 2.698 0.809 plexin a /// 0001569 // patterning of blood vessels /// 0048048 // embryonic eye morphogenesis /// 0044464 // cell part 0.074 0.2 n y n ruditapes_lrc34455 -2.224 0.809 0.284 0.128 n y n ruditapes_c18484 ? 0.809 0 0.059 n y n ruditapes_c7159 ? 0.809 0 0.059 n y n ruditapes_c7381 ? 0.809 0 0.059 n y n ruditapes_c10649 ? 0.809 condensin complex 0 0.058 n y n ruditapes_c16058 ? 0.809 0 0.058 n y n ruditapes_c25255 ? 0.809 pol protein 0 0.058 n y n ruditapes_c600 -3.336 0.809 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0.155 0.047 n y n ruditapes_c31736 -4.448 0.809 heat shock protein 22 isoform 2 0.12 0.027 n y n ruditapes_c17068 -4.448 0.809 0.119 0.027 n y n ruditapes_c3251 -? 0.809 metal-binding protein 0.059 0 n y n ruditapes2_c4358 -? 0.809 hypothetical protein ACLA_094050 [Aspergillus clavatus NRRL 1] 0.058 0 n y n ruditapes2_c4688 -? 0.809 kazal-type serine proteinase inhibitor 0.058 0 n y n ruditapes_c1098 -? 0.809 ly-6 neurotoxin-related protein 0.058 0 n y n ruditapes_c9135 -? 0.809 0.058 0 n y n ruditapes_c2904 1.054 0.81 cathepsin l /// 0016787 // hydrolase activity 31.864 33.583 n n n ruditapes2_c1413 -1.144 0.81 7.531 6.581 n n n ruditapes_c15146 -1.146 0.81 7.409 6.467 n n n ruditapes_c19581 -1.175 0.81 myc homolog 5.237 4.456 n n n ruditapes_c14161 1.237 0.81 2.174 2.688 n n n ruditapes2_c2390 -1.233 0.81 3.126 2.535 n n n ruditapes2_lrc4714 -1.297 0.81 large subunit ribosomal protein l7e /// 0030529 // ribonucleoprotein complex 2.065 1.592 n n n ruditapes2_c4751 1.369 0.81 peptidoglycan binding domain-containing protein "/// 0016798 // hydrolase activity, acting on glycosyl bonds" 0.966 1.322 n n n ruditapes_lrc14936 -1.346 0.81 1.601 1.189 n n n ruditapes_lrc35941 -1.38 0.81 lethal 06225 /// 0006811 // ion transport /// 0005743 // mitochondrial inner membrane /// 0045259 // proton-transporting ATP synthase complex 1.372 0.994 n n n ruditapes_s39802 -1.404 0.81 40s ribosomal protein s30 /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0000003 // reproduction /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.244 0.886 n n n ruditapes2_c718 -1.415 0.81 thioester-containing protein 1.195 0.844 n n n ruditapes_c28395 1.499 0.81 0.561 0.841 n n n ruditapes_c25383 -1.483 0.81 mipc synthase subunit 0.943 0.636 n n n ruditapes2_c934 1.619 0.81 0.383 0.62 n y n ruditapes_c16167 -1.617 0.81 0.661 0.409 n y n ruditapes_c11050 -1.668 0.81 0.594 0.356 n y n ruditapes_s37194 2.024 0.81 epididymal secretory protein e1 precursor /// 0009987 // cellular process /// 0006869 // lipid transport /// 0044424 // intracellular part 0.165 0.333 n y n ruditapes_c13855 -1.73 0.81 0.523 0.303 n y n ruditapes_lrc22172 2.248 0.81 0.118 0.266 n y n ruditapes_c9809 -1.819 0.81 0.452 0.249 n y n ruditapes_c4325 -1.906 0.81 0.399 0.21 n y n ruditapes_c31059 2.698 0.81 partial 0.073 0.198 n y n ruditapes_c19425 -2.224 0.81 0.28 0.126 n y n ruditapes2_c913 ? 0.81 0 0.058 n y n ruditapes_c15793 ? 0.81 0 0.058 n y n ruditapes_c15908 ? 0.81 0 0.058 n y n ruditapes_c20364 ? 0.81 0 0.058 n y n ruditapes_c23884 ? 0.81 0 0.058 n y n ruditapes_c26680 ? 0.81 0 0.058 n y n ruditapes_c27172 ? 0.81 0 0.058 n y n ruditapes_c28869 ? 0.81 0 0.058 n y n ruditapes_c29164 ? 0.81 0 0.058 n y n ruditapes_c2977 ? 0.81 deleted in malignant brain tumors 1 isoform a precursor /// 0031012 // extracellular matrix /// 0009888 // tissue development /// 0042221 // response to chemical stimulus /// 0030154 // cell differentiation /// 0048589 // developmental growth /// 0009611 // response to wounding /// 0044464 // cell part /// 0009653 // anatomical structure morphogenesis 0 0.058 n y n ruditapes_lrc25798 ? 0.81 0 0.058 n y n ruditapes_lrc32148 ? 0.81 angiopoietin-like 2 0 0.058 n y n ruditapes_lrc33209 ? 0.81 ribosomal protein l21 0 0.058 n y n ruditapes_lrc36386 ? 0.81 0 0.058 n y n ruditapes_c15209 -? 0.81 0.058 0 n y n ruditapes_c771 1.069 0.811 serine incorporator 1 /// 0005794 // Golgi apparatus /// 0040010 // positive regulation of growth rate /// 0005886 // plasma membrane /// 0005525 // GTP binding /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0005874 // microtubule /// 0018991 // oviposition /// 0007017 // microtubule-based process 20.397 21.804 n n n ruditapes2_c684 -1.094 0.811 17.379 15.891 n n n ruditapes_c4391 -1.112 0.811 12.241 11.009 n n n ruditapes_c12164 -1.126 0.811 sperm associated antigen 17 /// 0005515 // protein binding /// 0042995 // cell projection /// 0005622 // intracellular 9.779 8.688 n n n ruditapes_c18616 -1.126 0.811 9.727 8.641 n n n ruditapes_c10584 1.137 0.811 5.891 6.7 n n n ruditapes2_lrc5390 1.158 0.811 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 4.562 5.28 n n n ruditapes2_c1712 1.171 0.811 chromosome 1 open reading frame 194 3.939 4.611 n n n ruditapes_c28590 1.179 0.811 3.574 4.214 n n n ruditapes_c20751 1.237 0.811 2.138 2.644 n n n ruditapes_c29263 1.499 0.811 0.556 0.833 n n n ruditapes_c11112 1.606 0.811 0.395 0.635 n y n ruditapes_c21032 1.619 0.811 PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] 0.382 0.618 n y n ruditapes_lrc36507 1.799 0.811 methionine sulfoxide reductase b3 /// 0000318 // protein-methionine-R-oxide reductase activity /// 0005739 // mitochondrion /// 0005783 // endoplasmic reticulum /// 0008270 // zinc ion binding /// 0030091 // protein repair 0.246 0.443 n y n ruditapes_s36697 1.799 0.811 member of ras oncogene family-like 4 0.245 0.44 n y n ruditapes_c19189 -1.819 0.811 protein 0.444 0.244 n y n ruditapes_c21139 3.148 0.811 0.051 0.16 n y n ruditapes_c15353 ? 0.811 0 0.057 n y n ruditapes_c28075 ? 0.811 0 0.057 n y n ruditapes_c28148 ? 0.811 0 0.057 n y n ruditapes_c28883 ? 0.811 sulfotransferase phenol- member 1 0 0.057 n y n ruditapes_c30486 ? 0.811 0 0.057 n y n ruditapes2_c306 -4.448 0.811 0.118 0.026 n y n ruditapes_c8341 -4.448 0.811 0.117 0.026 n y n ruditapes_lrc38913 -4.448 0.811 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0003824 // catalytic activity /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis 0.117 0.026 n y n ruditapes_c29907 -? 0.811 0.057 0 n y n ruditapes_c6143 -? 0.811 dd186 upregulated upon bacterial challenge 0.057 0 n y n ruditapes_c9045 1.142 0.812 5.417 6.187 n n n ruditapes_c29189 1.193 0.812 3.068 3.661 n n n ruditapes_lrc26860 1.237 0.812 2.131 2.635 n n n ruditapes2_c1053 -1.231 0.812 adp-ribosylation factor 2 /// 0007264 // small GTPase mediated signal transduction /// 0016192 // vesicle-mediated transport /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0005525 // GTP binding /// 0005515 // protein binding 3.12 2.535 n n n ruditapes_c28309 -1.241 0.812 2.885 2.325 n n n ruditapes_c12032 1.296 0.812 1.402 1.817 n n n ruditapes_c7817 -1.286 0.812 sialic acid binding lectin /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 2.153 1.675 n n n ruditapes_c18021 -1.305 0.812 1.925 1.475 n n n ruditapes_lrc35429 -1.311 0.812 ribosomal protein s3 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 1.853 1.413 n n n ruditapes_c22769 -1.334 0.812 1.657 1.242 n n n ruditapes_c21731 1.413 0.812 glucose-1-phosphate adenylyltransferase 0.771 1.09 n n n ruditapes_c15603 1.478 0.812 mgc83521 protein 0.597 0.881 n n n ruditapes_c10939 -1.483 0.812 0.929 0.626 n n n ruditapes_c24431 -1.516 0.812 rna-binding protein 8a "/// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0000166 // nucleotide binding /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0051028 // mRNA transport /// 0005737 // cytoplasm /// 0000398 // nuclear mRNA splicing, via spliceosome" 0.837 0.552 n y n ruditapes_c11177 1.686 0.812 chondroitin sulfate proteoglycan 3 /// 0005488 // binding 0.316 0.533 n y n ruditapes_c9367 1.799 0.812 0.243 0.438 n y n ruditapes_c20246 -1.617 0.812 0.645 0.399 n y n ruditapes_c18848 -1.617 0.812 0.643 0.398 n y n ruditapes2_c930 1.911 0.812 0.194 0.371 n y n ruditapes_c16626 -1.906 0.812 0.388 0.204 n y n ruditapes_c13759 2.698 0.812 snf2-related domain-containing protein 0.071 0.193 n y n ruditapes_c24764 2.698 0.812 0.071 0.193 n y n ruditapes_c25568 -2.224 0.812 0.276 0.124 n y n ruditapes_c4327 -2.224 0.812 0.275 0.123 n y n ruditapes_c30864 ? 0.812 0 0.057 n y n ruditapes_c31595 ? 0.812 0 0.057 n y n ruditapes_c10799 ? 0.812 0 0.056 n y n ruditapes_c1506 ? 0.812 0 0.056 n y n ruditapes_c4161 ? 0.812 protein 0 0.056 n y n ruditapes2_c4371 -3.336 0.812 0.151 0.045 n y n ruditapes2_lrc6133 -? 0.812 kazal-type serine proteinase inhibitor 0.057 0 n y n ruditapes_c12536 -? 0.812 0.057 0 n y n ruditapes_c6184 -? 0.812 novel protein with a von willebrand factor type d domain 0.057 0 n y n ruditapes2_c562 -? 0.812 0.056 0 n y n ruditapes_lrc30782 -? 0.812 0.056 0 n y n ruditapes_c8298 -1.128 0.813 9.215 8.168 n n n ruditapes_lrc29434 1.166 0.813 4.042 4.713 n n n ruditapes_c15746 -1.202 0.813 hiv-1 induced protein hin- partial 3.902 3.247 n n n ruditapes_c15086 1.231 0.813 dumpy cg33196- partial 2.208 2.718 n n n ruditapes_c26209 -1.235 0.813 2.968 2.403 n n n ruditapes2_c2035 -1.265 0.813 2.415 1.909 n n n ruditapes_c30129 -1.297 0.813 1.991 1.535 n n n ruditapes2_c3628 -1.483 0.813 0.918 0.619 n n n ruditapes2_c3533 1.619 0.813 alcohol dehydrogenase /// 0044237 // cellular metabolic process /// 0003824 // catalytic activity /// 0005488 // binding 0.371 0.6 n y n ruditapes_c12762 1.686 0.813 0.312 0.527 n y n ruditapes_c9656 1.686 0.813 polyunsaturated fatty acid elongase 0.312 0.526 n y n ruditapes_c12188 -1.57 0.813 0.717 0.457 n y n ruditapes_c10367 1.799 0.813 lysosomal alpha-mannosidase /// 0003824 // catalytic activity 0.24 0.431 n y n ruditapes_c27058 2.024 0.813 0.159 0.321 n y n ruditapes_c20553 -1.711 0.813 udp-gal:beta c beta -galactosyltransferase i "/// 0016758 // transferase activity, transferring hexosyl groups" 0.524 0.306 n y n ruditapes_c24925 -1.779 0.813 0.466 0.262 n y n ruditapes_c26809 -2.224 0.813 novel protein vertebrate chondroitin sulfate proteoglycan family /// 0005634 // nucleus /// 0005737 // cytoplasm 0.273 0.123 n y n ruditapes2_c4945 ? 0.813 0 0.056 n y n ruditapes2_lrc3395 ? 0.813 bdef_tactr ame: full=big defensin flags: precursor /// 0050896 // response to stimulus 0 0.056 n y n ruditapes_c23800 ? 0.813 0 0.056 n y n ruditapes_c8575 ? 0.813 hypothetical transporter 0 0.056 n y n ruditapes_c36933 -4.448 0.813 fatty acid binding protein adipocyte 0.115 0.026 n y n ruditapes_lrc38315 -4.448 0.813 0.115 0.026 n y n ruditapes2_c2262 -? 0.813 0.056 0 n y n ruditapes_c24210 -? 0.813 0.056 0 n y n ruditapes_c28828 -? 0.813 tocopherol transfer 0.056 0 n y n ruditapes2_c310 -1.094 0.814 adenylate kinase "/// 0016772 // transferase activity, transferring phosphorus-containing groups" 16.845 15.4 n n n ruditapes_c32198 -1.141 0.814 7.542 6.609 n n n ruditapes_lrc18478 1.156 0.814 4.465 5.163 n n n ruditapes_c19939 1.166 0.814 3.998 4.66 n n n ruditapes_c10118 1.183 0.814 cop9 signalosome subunit 4 /// 0008180 // signalosome /// 0005515 // protein binding /// 0005737 // cytoplasm 3.362 3.975 n n n ruditapes_c2707 -1.239 0.814 2.865 2.313 n n n ruditapes_c14777 -1.253 0.814 eukaryotic translation initiation factor subunit 1 26kda /// 0044237 // cellular metabolic process /// 0050896 // response to stimulus /// 0044464 // cell part 2.596 2.071 n n n ruditapes2_c3673 -1.286 0.814 2.099 1.633 n n n ruditapes_c20867 -1.311 0.814 1.826 1.393 n n n ruditapes_c13251 -1.32 0.814 1.743 1.32 n n n ruditapes_c22415 1.387 0.814 0.852 1.182 n n n ruditapes_c17100 1.424 0.814 0.72 1.026 n n n ruditapes2_c2184 1.542 0.814 0.466 0.719 n y n ruditapes_c2610 1.557 0.814 dehydrogenase reductase (sdr family) member 10 /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0.446 0.694 n y n ruditapes_lrc34021 -1.459 0.814 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0.971 0.666 n n n ruditapes_c1385 1.799 0.814 cytochrome c oxidase subunit ii /// 0055114 // oxidation reduction /// 0046872 // metal ion binding /// 0016020 // membrane 0.238 0.427 n y n ruditapes_c25375 -1.617 0.814 0.635 0.393 n y n ruditapes_lrc34690 -1.617 0.814 nadh dehydrogenase iron-sulfur protein mitochondrial precursor 0.635 0.393 n y n ruditapes_c16611 2.248 0.814 0.114 0.257 n y n ruditapes_s36332 -1.853 0.814 0.409 0.221 n y n ruditapes_c11871 ? 0.814 0 0.056 n y n ruditapes_c14662 ? 0.814 0 0.056 n y n ruditapes_c16108 ? 0.814 0 0.056 n y n ruditapes_c2970 ? 0.814 hypothetical protein BRAFLDRAFT_110787 [Branchiostoma floridae] 0 0.056 n y n ruditapes2_c2346 ? 0.814 hypothetical protein BRAFLDRAFT_76550 [Branchiostoma floridae] 0 0.055 n y n ruditapes_c15714 ? 0.814 fibropellin ia /// 0005509 // calcium ion binding 0 0.055 n y n ruditapes_c17252 ? 0.814 complement c1q-like protein 2 0 0.055 n y n ruditapes_lrc32042 ? 0.814 0 0.055 n y n ruditapes_s37092 ? 0.814 0 0.055 n y n ruditapes_s39331 ? 0.814 0 0.055 n y n ruditapes_c4474 -4.448 0.814 protein /// 0005488 // binding 0.113 0.026 n y n ruditapes2_lrc4387 -4.448 0.814 0.113 0.025 n y n ruditapes_c19549 -? 0.814 0.055 0 n y n ruditapes_c25513 1.044 0.815 44.059 45.978 n n n ruditapes_lrc13844 1.124 0.815 6.709 7.542 n n n ruditapes_c123 -1.132 0.815 8.467 7.481 n n n ruditapes_c23760 -1.197 0.815 3.977 3.321 n n n ruditapes_c2442 -1.2 0.815 3.911 3.26 n n n ruditapes_c16412 1.306 0.815 1.282 1.675 n n n ruditapes_c9593 -1.291 0.815 2.024 1.568 n n n ruditapes_lrc34468 -1.3 0.815 kl-2 1-beta dynein heavy chain 1.923 1.479 n n n ruditapes_c15704 -1.311 0.815 1.808 1.378 n n n ruditapes_s33860 1.349 0.815 chitin deacetylase 3 1.014 1.368 n n n ruditapes_c20734 -1.363 0.815 1.404 1.03 n n n ruditapes2_c1998 -1.402 0.815 gm2 ganglioside activator protein /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0004563 // beta-N-acetylhexosaminidase activity /// 0006629 // lipid metabolic process /// 0051179 // localization /// 0044459 // plasma membrane part /// 0009987 // cellular process /// 0008047 // enzyme activator activity /// 0050877 // neurological system process 1.192 0.85 n n n ruditapes_c14612 1.606 0.815 dehydrogenase reductase sdr family member 4 /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0005488 // binding /// 0042574 // retinal metabolic process /// 0001758 // retinal dehydrogenase activity /// 0005777 // peroxisome 0.379 0.609 n y n ruditapes2_c1245 -1.483 0.815 0.898 0.606 n n n ruditapes_c26285 -1.483 0.815 ubiquitin specific peptidase 4 (proto-oncogene) /// 0019941 // modification-dependent protein catabolic process /// 0005634 // nucleus /// 0005515 // protein binding /// 0005764 // lysosome /// 0004843 // ubiquitin-specific protease activity /// 0004197 // cysteine-type endopeptidase activity 0.897 0.605 n n n ruditapes_c18274 1.619 0.815 0.364 0.589 n y n ruditapes_lrc9429 1.686 0.815 0.304 0.512 n y n ruditapes_c15866 1.709 0.815 0.288 0.492 n y n ruditapes_c10705 1.799 0.815 0.235 0.422 n y n ruditapes_c8404 -1.617 0.815 tyrosine aminotransferase /// 0030170 // pyridoxal phosphate binding /// 0009058 // biosynthetic process /// 0046872 // metal ion binding /// 0004838 // L-tyrosine:2-oxoglutarate aminotransferase activity /// 0030001 // metal ion transport /// 0009072 // aromatic amino acid family metabolic process /// 0016847 // 1-aminocyclopropane-1-carboxylate synthase activity 0.627 0.388 n y n ruditapes_s39674 2.024 0.815 0.156 0.315 n y n ruditapes_lrc27687 -1.853 0.815 0.406 0.219 n y n ruditapes_c10986 2.698 0.815 aldehyde dehydrogenase 9 member a1 /// 0055114 // oxidation reduction /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0042136 // neurotransmitter biosynthetic process /// 0019145 // aminobutyraldehyde dehydrogenase activity /// 0005737 // cytoplasm /// 0042445 // hormone metabolic process /// 0006081 // cellular aldehyde metabolic process /// 0004029 // aldehyde dehydrogenase (NAD) activity 0.07 0.188 n y n ruditapes_c4440 ? 0.815 0 0.055 n y n ruditapes_c639 ? 0.815 0 0.055 n y n ruditapes_c7373 ? 0.815 0 0.055 n y n ruditapes_c7815 ? 0.815 0 0.055 n y n ruditapes_c9595 ? 0.815 0 0.055 n y n ruditapes_c729 ? 0.815 0 0.054 n y n ruditapes2_c194 -3.336 0.815 0.146 0.044 n y n ruditapes_c11390 -4.448 0.815 0.113 0.025 n y n ruditapes2_c89 -4.448 0.815 plac8-like protein 1 0.112 0.025 n y n ruditapes_c5083 -4.448 0.815 0.112 0.025 n y n ruditapes_c18971 -? 0.815 0.055 0 n y n ruditapes_c30229 -? 0.815 0.055 0 n y n ruditapes_c8630 -? 0.815 col protein 0.055 0 n y n ruditapes_c18995 -1.04 0.816 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 105.358 101.305 n n n ruditapes_c15070 -1.084 0.816 20.59 18.996 n n n ruditapes_c3582 1.147 0.816 4.896 5.614 n n n ruditapes2_c2912 1.15 0.816 elegans protein confirmed by transcript evidence 4.658 5.359 n n n ruditapes_c9872 -1.163 0.816 5.619 4.833 n n n ruditapes_c20353 1.167 0.816 3.877 4.523 n n n ruditapes_c20190 -1.179 0.816 4.76 4.039 n n n ruditapes_c24259 1.188 0.816 3.11 3.693 n n n ruditapes2_c629 -1.228 0.816 3.043 2.477 n n n ruditapes_c29976 -1.271 0.816 2.263 1.781 n n n ruditapes_c28207 1.314 0.816 1.213 1.594 n n n ruditapes_c18754 1.402 0.816 sh3-domain grb2-like endophilin b1 /// 0042981 // regulation of apoptosis /// 0044444 // cytoplasmic part /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0043231 // intracellular membrane-bounded organelle /// 0005488 // binding 0.772 1.083 n n n ruditapes_c29055 1.418 0.816 PREDICTED: similar to polyprotein [Danio rerio] 0.724 1.026 n n n ruditapes_c12321 -1.39 0.816 1.232 0.886 n n n ruditapes_c11624 -1.522 0.816 0.788 0.518 n y n ruditapes_c13121 1.724 0.816 PREDICTED: hypothetical protein [Acyrthosiphon pisum] 0.275 0.474 n y n ruditapes_c10310 1.799 0.816 0.231 0.416 n y n ruditapes_lrc33902 -1.617 0.816 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.615 0.38 n y n ruditapes_lrc38367 -1.668 0.816 0.552 0.331 n y n ruditapes_c8660 -1.711 0.816 c1q and tumor necrosis factor related protein 3 0.509 0.297 n y n ruditapes_c3282 -1.73 0.816 a chain the adipocyte lipid-binding protein at angstroms resolution: crystal structures of the apoprotein and with bound saturated and unsaturated fatty acids 0.492 0.284 n y n ruditapes_c12350 -1.779 0.816 0.451 0.254 n y n ruditapes_s36860 -1.853 0.816 0.402 0.217 n y n ruditapes_c30660 -2.224 0.816 hypothetical protein NEMVEDRAFT_v1g221088 [Nematostella vectensis] 0.263 0.118 n y n ruditapes_c11523 -2.224 0.816 hypothetical protein BRAFLDRAFT_74510 [Branchiostoma floridae] 0.262 0.118 n y n ruditapes2_c2177 ? 0.816 0 0.054 n y n ruditapes_c19308 ? 0.816 0 0.054 n y n ruditapes_c23149 ? 0.816 0 0.054 n y n ruditapes_c23749 ? 0.816 0 0.054 n y n ruditapes_c24874 ? 0.816 0 0.054 n y n ruditapes_c28478 ? 0.816 0 0.054 n y n ruditapes_c28767 ? 0.816 0 0.054 n y n ruditapes_c31924 ? 0.816 aggrecan 1 /// 0031012 // extracellular matrix /// 0048731 // system development /// 0005488 // binding /// 0009987 // cellular process /// 0044424 // intracellular part 0 0.054 n y n ruditapes_c7633 ? 0.816 0 0.054 n y n ruditapes_lrc33355 ? 0.816 0 0.054 n y n ruditapes2_c974 -? 0.816 0.054 0 n y n ruditapes2_lrc4271 -? 0.816 developmentally-regulated vdg3 0.054 0 n y n ruditapes_c8934 -? 0.816 0.054 0 n y n ruditapes_lrc33574 -? 0.816 0.054 0 n y n ruditapes_c5071 -1.109 0.817 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 11.999 10.818 n n n ruditapes_lrc22528 1.152 0.817 4.571 5.264 n n n ruditapes_c17590 -1.16 0.817 5.76 4.968 n n n ruditapes2_lrc3610 -1.172 0.817 nadh dehydrogenase 1 alpha 13 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 5.022 4.286 n n n ruditapes_c11827 1.215 0.817 iduronate-2-sulfatase 2.387 2.901 n n n ruditapes2_lrc4465 -1.232 0.817 acyl carrier mitochondrial precursor /// 0005488 // binding /// 0008610 // lipid biosynthetic process 2.897 2.35 n n n ruditapes2_lrc3626 1.282 0.817 cytochrome c oxidase subunit va 1.452 1.862 n n n ruditapes_c2262 -1.287 0.817 glutathione s-transferase 2.02 1.569 n n n ruditapes_c2650 1.319 0.817 1.167 1.539 n n n ruditapes_lrc33944 -1.308 0.817 1.784 1.364 n n n ruditapes_c17896 -1.415 0.817 protein 1.109 0.784 n n n ruditapes_c21058 -1.415 0.817 1.105 0.781 n n n ruditapes_lrc34223 -1.43 0.817 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 1.051 0.735 n n n ruditapes2_c4272 1.709 0.817 0.282 0.482 n y n ruditapes2_c2095 -1.73 0.817 0.485 0.281 n y n ruditapes_c26562 2.248 0.817 0.11 0.248 n y n ruditapes_c9757 2.248 0.817 0.11 0.246 n y n ruditapes_c4490 -1.819 0.817 sarcoplasmic calcium binding protein 0.417 0.229 n y n ruditapes2_lrc4508 2.698 0.817 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.068 0.183 n y n ruditapes_lrc38707 -2.224 0.817 0.261 0.118 n y n ruditapes_c13135 -2.224 0.817 0.26 0.117 n y n ruditapes2_c502 ? 0.817 antimicrobial peptide hydramacin 0 0.054 n y n ruditapes_c16022 ? 0.817 0 0.054 n y n ruditapes_c31387 ? 0.817 0 0.054 n y n ruditapes2_c1339 ? 0.817 0 0.053 n y n ruditapes_c5994 ? 0.817 0 0.053 n y n ruditapes_lrc32571 ? 0.817 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 0 0.053 n y n ruditapes2_c415 -3.336 0.817 0.143 0.043 n y n ruditapes_c30354 -4.448 0.817 0.11 0.025 n y n ruditapes_lrc35890 -4.448 0.817 0.11 0.025 n y n ruditapes_c29757 -? 0.817 0.054 0 n y n ruditapes_c12500 -? 0.817 phospholipase group iva ( calcium-dependent) /// 0030501 // positive regulation of bone mineralization /// 0043129 // surfactant homeostasis /// 0042588 // zymogen granule /// 0048471 // perinuclear region of cytoplasm /// 0031622 // positive regulation of fever /// 0031394 // positive regulation of prostaglandin biosynthetic process /// 0005624 // membrane fraction /// 0010226 // response to lithium ion /// 0008284 // positive regulation of cell proliferation /// 0005634 // nucleus /// 0001554 // luteolysis /// 0043065 // positive regulation of apoptosis /// 0051384 // response to glucocorticoid stimulus /// 0032496 // response to lipopolysaccharide /// 0047498 // calcium-dependent phospholipase A2 activity /// 0007568 // aging /// 0046697 // decidualization /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0009408 // response to heat /// 0033280 // response to vitamin D /// 0042542 // response to hydrogen peroxide /// 0051597 // response to methylmercury /// 0006644 // phospholipid metabolic process /// 0019369 // arachidonic acid metabolic process /// 0010243 // response to organic nitrogen /// 0031340 // positive regulation of vesicle fusion 0.053 0 n y n ruditapes_c1770 -? 0.817 0.053 0 n y n ruditapes_c31852 -? 0.817 0.053 0 n y n ruditapes_c23702 1.059 0.818 25.512 27.005 n n n ruditapes_c29888 1.086 0.818 cytoplasmic dynein 1 heavy chain 1 /// 0003774 // motor activity /// 0015630 // microtubule cytoskeleton /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0009987 // cellular process /// 0044430 // cytoskeletal part 12.855 13.956 n n n ruditapes_c13454 -1.154 0.818 6.136 5.317 n n n ruditapes_c7024 -1.229 0.818 von willebrand factor c domain containing 2 /// 0048522 // positive regulation of cellular process /// 0005578 // proteinaceous extracellular matrix 2.966 2.414 n n n ruditapes_c4066 -1.239 0.818 2.716 2.192 n n n ruditapes_lrc33360 -1.266 0.818 2.27 1.794 n n n ruditapes_c25121 -1.293 0.818 1.937 1.498 n n n ruditapes_lrc25398 -1.318 0.818 1.681 1.276 n n n ruditapes_c17713 -1.334 0.818 1.549 1.161 n n n ruditapes_c449 -1.38 0.818 1.253 0.908 n n n ruditapes_c25099 1.478 0.818 glyoxylate reductase hydroxypyruvate reductase "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0005488 // binding /// 0008152 // metabolic process" 0.556 0.821 n n n ruditapes_c8465 1.499 0.818 0.514 0.77 n n n ruditapes_c20731 -1.439 0.818 1.004 0.698 n n n ruditapes_c18298 1.619 0.818 0.353 0.572 n y n ruditapes_c34793 1.686 0.818 0.294 0.497 n y n ruditapes_c20890 -1.529 0.818 0.753 0.493 n y n ruditapes2_lrc5181 1.799 0.818 0.226 0.407 n y n ruditapes_c3146 -1.606 0.818 0.623 0.388 n y n ruditapes_c23105 1.949 0.818 parkinson disease protein 7 /// 0005634 // nucleus /// 0007265 // Ras protein signal transduction /// 0005515 // protein binding /// 0050896 // response to stimulus /// 0065008 // regulation of biological quality /// 0005737 // cytoplasm 0.171 0.333 n y n ruditapes_c23926 -2.224 0.818 0.257 0.116 n y n ruditapes_c7665 -2.224 0.818 0.257 0.116 n y n ruditapes2_c1336 -2.224 0.818 protein /// 0019028 // viral capsid 0.257 0.115 n y n ruditapes_c15289 -2.224 0.818 0.257 0.115 n y n ruditapes_c14384 ? 0.818 hypothetical protein BRAFLDRAFT_64071 [Branchiostoma floridae] 0 0.053 n y n ruditapes_c147 ? 0.818 serine protease inhibitor dipetalogastin 0 0.053 n y n ruditapes_c23474 ? 0.818 monoamine oxidase 0 0.053 n y n ruditapes_c24837 ? 0.818 0 0.053 n y n ruditapes_c2995 ? 0.818 0 0.053 n y n ruditapes_c3578 ? 0.818 0 0.053 n y n ruditapes_lrc32280 ? 0.818 signal transduction protein with efhand domain 0 0.053 n y n ruditapes_s38753 ? 0.818 developmentally-regulated vdg3 0 0.053 n y n ruditapes_c11365 -4.448 0.818 0.109 0.024 n y n ruditapes_c30880 -4.448 0.818 peptidoglycan-recognition protein precursor 0.108 0.024 n y n ruditapes2_c1621 -? 0.818 0.053 0 n y n ruditapes2_c880 -? 0.818 peptidoglycan-recognition protein precursor 0.053 0 n y n ruditapes_lrc34773 -? 0.818 0.053 0 n y n ruditapes2_c1995 -1.107 0.819 12.285 11.097 n n n ruditapes_c5623 -1.174 0.819 4.836 4.121 n n n ruditapes_c9984 -1.175 0.819 4.794 4.08 n n n ruditapes2_c1688 -1.183 0.819 hypothetical protein BRAFLDRAFT_64332 [Branchiostoma floridae] 4.385 3.707 n n n ruditapes2_c1931 -1.189 0.819 4.122 3.465 n n n ruditapes_c5842 -1.191 0.819 4.023 3.377 n n n ruditapes_c26391 -1.222 0.819 ligatin 3.103 2.539 n n n ruditapes_c24309 -1.223 0.819 3.079 2.518 n n n ruditapes_c4166 1.241 0.819 1.899 2.356 n n n ruditapes_c23720 -1.254 0.819 2.438 1.944 n n n ruditapes2_lrc5663 -1.297 0.819 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.864 1.437 n n n ruditapes_c28069 1.349 0.819 proteasome ( macropain) 26s non- 8 /// 0005634 // nucleus /// 0006508 // proteolysis /// 0043234 // protein complex /// 0051439 // regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005737 // cytoplasm 0.962 1.298 n n n ruditapes_c24475 -1.377 0.819 1.265 0.919 n n n ruditapes_c19002 -1.483 0.819 0.852 0.575 n n n ruditapes_c14587 -1.54 0.819 sterile20-like kinase cg4527- isoform b 0.728 0.473 n y n ruditapes_c21364 -1.54 0.819 0.728 0.473 n y n ruditapes_c11033 -1.557 0.819 0.695 0.447 n y n ruditapes_lrc17449 -1.617 0.819 0.596 0.368 n y n ruditapes_c23900 -1.779 0.819 0.438 0.246 n y n ruditapes_c23908 2.248 0.819 0.108 0.242 n y n ruditapes_c12412 -1.853 0.819 0.391 0.211 n y n ruditapes_c17646 -1.853 0.819 0.391 0.211 n y n ruditapes_c22606 -1.853 0.819 0.391 0.211 n y n ruditapes_s37759 -2.224 0.819 0.256 0.115 n y n ruditapes_c9297 -2.224 0.819 0.255 0.115 n y n ruditapes_c12875 -2.224 0.819 0.254 0.114 n y n ruditapes_lrc36157 -2.224 0.819 0.254 0.114 n y n ruditapes_c19233 ? 0.819 0 0.053 n y n ruditapes_c23839 ? 0.819 0 0.053 n y n ruditapes2_c1074 ? 0.819 protein 0 0.052 n y n ruditapes_c11453 ? 0.819 tbc1 domain member 9 (with gram domain) /// 0005096 // GTPase activator activity /// 0044464 // cell part 0 0.052 n y n ruditapes_c13718 ? 0.819 0 0.052 n y n ruditapes_c16676 ? 0.819 0 0.052 n y n ruditapes_c18158 ? 0.819 0 0.052 n y n ruditapes_c27907 ? 0.819 0 0.052 n y n ruditapes_c28375 ? 0.819 0 0.052 n y n ruditapes_c30166 ? 0.819 0 0.052 n y n ruditapes_c1918 -3.336 0.819 0.139 0.042 n y n ruditapes_lrc36471 -4.448 0.819 0.108 0.024 n y n ruditapes_c614 -? 0.819 c1q and tumor necrosis factor related protein 3 0.053 0 n y n ruditapes2_c1374 -? 0.819 0.052 0 n y n ruditapes_c13891 -? 0.819 0.052 0 n y n ruditapes_c29356 -? 0.819 0.052 0 n y n ruditapes_c31724 -? 0.819 0.052 0 n y n ruditapes_c7487 -? 0.819 hypothetical protein BRAFLDRAFT_75504 [Branchiostoma floridae] 0.052 0 n y n ruditapes_c7710 1.066 0.82 20.187 21.512 n n n ruditapes_c14791 1.091 0.82 11.247 12.271 n n n ruditapes2_c2475 1.092 0.82 11.104 12.124 n n n ruditapes2_c972 -1.119 0.82 novel protein vertebrate neuropilin and tolloid -like 2 9.749 8.71 n n n ruditapes_s38623 1.121 0.82 6.707 7.518 n n n ruditapes_c9720 1.134 0.82 5.514 6.254 n n n ruditapes_c11928 -1.148 0.82 6.432 5.602 n n n ruditapes_c14865 -1.192 0.82 4 3.356 n n n ruditapes_c9240 -1.195 0.82 3.857 3.227 n n n ruditapes2_c2783 1.211 0.82 hn1l protein 2.408 2.916 n n n ruditapes_c2769 -1.219 0.82 3.127 2.566 n n n ruditapes2_c5772 1.234 0.82 iron storage protein h-ferritin /// 0005488 // binding 1.989 2.456 n n n ruditapes_c22577 1.263 0.82 1.595 2.015 n n n ruditapes_c24817 -1.32 0.82 1.623 1.229 n n n ruditapes_c23762 -1.35 0.82 1.399 1.036 n n n ruditapes_c21603 1.478 0.82 0.543 0.803 n n n ruditapes2_c631 1.911 0.82 nadph-dependent fmn reductase 0.178 0.341 n y n ruditapes_c30649 -1.779 0.82 0.433 0.244 n y n ruditapes_c27735 -1.779 0.82 0.43 0.242 n y n ruditapes_c22965 -1.853 0.82 0.386 0.208 n y n ruditapes2_lrc4197 -1.906 0.82 0.357 0.187 n y n ruditapes_lrc35341 2.698 0.82 death-associated protein 0.065 0.177 n y n ruditapes_c17253 2.698 0.82 calcium-dependent protein kinase /// 0005488 // binding /// 0016301 // kinase activity 0.065 0.176 n y n ruditapes_s39199 -2.224 0.82 0.252 0.113 n y n ruditapes_c16820 -2.224 0.82 0.251 0.113 n y n ruditapes_c21424 -2.224 0.82 0.251 0.113 n y n ruditapes2_c4043 ? 0.82 0 0.052 n y n ruditapes2_lrc1604 ? 0.82 0 0.052 n y n ruditapes2_lrc4263 ? 0.82 ly-6 neurotoxin-related protein 0 0.052 n y n ruditapes2_lrc5670 ? 0.82 0 0.052 n y n ruditapes_c19003 ? 0.82 col protein 0 0.052 n y n ruditapes_c25925 ? 0.82 0 0.052 n y n ruditapes_c26855 ? 0.82 0 0.052 n y n ruditapes_c29447 ? 0.82 0 0.052 n y n ruditapes_c4197 ? 0.82 0 0.052 n y n ruditapes_c7005 ? 0.82 0 0.052 n y n ruditapes_lrc33325 ? 0.82 0 0.052 n y n ruditapes2_lrc3212 -? 0.82 0.052 0 n y n ruditapes_c1600 1.041 0.821 45.323 47.182 n n n ruditapes_c24226 1.078 0.821 14.663 15.809 n n n ruditapes_c30263 -1.172 0.821 4.833 4.123 n n n ruditapes2_c1767 -1.247 0.821 gm2 ganglioside activator 2.499 2.003 n n n ruditapes_c28789 -1.308 0.821 1.704 1.303 n n n ruditapes_c22996 1.349 0.821 0.947 1.277 n n n ruditapes_c29868 -1.483 0.821 0.842 0.568 n n n ruditapes_lrc10811 1.649 0.821 0.313 0.517 n y n ruditapes2_c2632 -1.547 0.821 smt3 suppressor of mif two 3 homolog 2 ( cerevisiae) /// 0016925 // protein sumoylation /// 0046914 // transition metal ion binding /// 0019941 // modification-dependent protein catabolic process /// 0019789 // SUMO ligase activity /// 0000776 // kinetochore /// 0005515 // protein binding 0.699 0.452 n y n ruditapes_c28787 1.799 0.821 0.219 0.394 n y n ruditapes_c10302 -1.701 0.821 selenium-binding protein 0.494 0.29 n y n ruditapes_lrc38043 -1.779 0.821 0.425 0.239 n y n ruditapes_s37800 -2.224 0.821 0.249 0.112 n y n ruditapes2_lrc3231 ? 0.821 protein /// 0005488 // binding 0 0.051 n y n ruditapes_c14879 ? 0.821 0 0.051 n y n ruditapes_c20200 ? 0.821 0 0.051 n y n ruditapes_c27292 ? 0.821 0 0.051 n y n ruditapes_c29786 ? 0.821 0 0.051 n y n ruditapes_lrc32837 ? 0.821 multiple egf-like-domains 6 0 0.051 n y n ruditapes_lrc36512 ? 0.821 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0 0.051 n y n ruditapes_lrc36910 ? 0.821 serum amyloid a 0 0.051 n y n ruditapes_lrc38102 ? 0.821 0 0.051 n y n ruditapes_s40347 ? 0.821 0 0.051 n y n ruditapes2_lrc3400 -4.448 0.821 protein 0.104 0.023 n y n ruditapes_c1907 -1.095 0.822 14.825 13.533 n n n ruditapes_c29863 -1.118 0.822 9.82 8.786 n n n ruditapes_c23101 -1.137 0.822 7.262 6.385 n n n ruditapes_c27554 1.147 0.822 4.521 5.188 n n n ruditapes_c19344 -1.181 0.822 4.308 3.647 n n n ruditapes_lrc35497 -1.184 0.822 60s ribosomal protein l10 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 4.21 3.555 n n n ruditapes_c31848 -1.187 0.822 mitochondrial ribosomal protein l44 /// 0004518 // nuclease activity /// 0005515 // protein binding /// 0044424 // intracellular part 4.074 3.432 n n n ruditapes_c22005 1.194 0.822 2.715 3.243 n n n ruditapes_c30117 1.211 0.822 2.348 2.843 n n n ruditapes_c12617 -1.225 0.822 2.909 2.374 n n n ruditapes_c21934 -1.271 0.822 2.113 1.663 n n n ruditapes_c26907 1.323 0.822 1.079 1.428 n n n ruditapes_c21028 1.349 0.822 0.931 1.256 n n n ruditapes_c8879 -1.368 0.822 type alpha 1 /// 0005198 // structural molecule activity /// 0005578 // proteinaceous extracellular matrix 1.261 0.921 n n n ruditapes_c36322 1.453 0.822 0.587 0.853 n n n ruditapes_lrc24828 -1.445 0.822 0.935 0.647 n n n ruditapes2_c884 -1.503 0.822 nf-kappa-b inhibitor epsilon /// 0010556 // regulation of macromolecule biosynthetic process /// 0031326 // regulation of cellular biosynthetic process /// 0034645 // cellular macromolecule biosynthetic process 0.781 0.52 n y n ruditapes_c28385 1.649 0.822 0.31 0.511 n y n ruditapes_c11346 -2.224 0.822 0.247 0.111 n y n ruditapes_c21187 -2.224 0.822 0.247 0.111 n y n ruditapes_c9430 -2.224 0.822 0.247 0.111 n y n ruditapes2_c6787 ? 0.822 0 0.051 n y n ruditapes_c26978 ? 0.822 0 0.051 n y n ruditapes_c3442 ? 0.822 0 0.051 n y n ruditapes_lrc36144 ? 0.822 0 0.051 n y n ruditapes_lrc36714 ? 0.822 0 0.051 n y n ruditapes2_c1518 ? 0.822 serum amyloid a /// 0005576 // extracellular region 0 0.05 n y n ruditapes2_lrc7092 ? 0.822 0 0.05 n y n ruditapes_c29951 ? 0.822 0 0.05 n y n ruditapes_c16749 -? 0.822 0.051 0 n y n ruditapes_c3859 -? 0.822 0.051 0 n y n ruditapes2_c148 -1.077 0.823 23.071 21.428 n n n ruditapes_c17785 -1.128 0.823 8.184 7.252 n n n ruditapes_lrc22496 -1.206 0.823 3.391 2.812 n n n ruditapes_c29883 -1.232 0.823 2.718 2.206 n n n ruditapes2_c1440 -1.277 0.823 1.987 1.556 n n n ruditapes_c29841 -1.326 0.823 1.53 1.154 n n n ruditapes2_c2496 1.484 0.823 possible regucalcin-like protein 0.513 0.762 n n n ruditapes_c27920 1.649 0.823 0.305 0.503 n y n ruditapes_c29921 -1.668 0.823 0.514 0.308 n y n ruditapes_c10464 -1.853 0.823 hypothetical protein BRAFLDRAFT_79178 [Branchiostoma floridae] 0.369 0.199 n y n ruditapes_c3473 2.698 0.823 0.063 0.171 n y n ruditapes_c21264 -2.224 0.823 0.244 0.11 n y n ruditapes_c23069 -2.224 0.823 0.244 0.11 n y n ruditapes_c505 -2.224 0.823 0.242 0.109 n y n ruditapes_c28306 ? 0.823 0 0.05 n y n ruditapes_c30306 ? 0.823 0 0.05 n y n ruditapes_c3396 ? 0.823 matrilin 2 0 0.05 n y n ruditapes_lrc33478 ? 0.823 glutathione s-transferase pi-class /// 0008144 // drug binding /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005634 // nucleus /// 0005515 // protein binding /// 0032502 // developmental process /// 0043295 // glutathione binding /// 0006805 // xenobiotic metabolic process 0 0.05 n y n ruditapes_lrc34329 ? 0.823 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum 0 0.05 n y n ruditapes_s36093 ? 0.823 0 0.05 n y n ruditapes_s38870 ? 0.823 0 0.05 n y n ruditapes_c13919 -? 0.823 0.05 0 n y n ruditapes_lrc36326 -? 0.823 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0.05 0 n y n ruditapes_c30525 -1.119 0.824 9.457 8.453 n n n ruditapes_c9132 -1.122 0.824 9.014 8.036 n n n ruditapes2_c2167 -1.213 0.824 harbinger transposase derived 1 3.157 2.603 n n n ruditapes_c18801 -1.225 0.824 2.852 2.329 n n n ruditapes_c15233 -1.235 0.824 2.622 2.122 n n n ruditapes2_c1890 -1.308 0.824 bdef_tactr ame: full=big defensin flags: precursor /// 0050896 // response to stimulus 1.657 1.266 n n n ruditapes_c21182 -1.32 0.824 1.554 1.177 n n n ruditapes_c29292 1.39 0.824 0.748 1.04 n n n ruditapes2_lrc4172 -1.352 0.824 basic transcription factor 3-like 4 1.333 0.986 n n n ruditapes_c14139 1.499 0.824 0.481 0.722 n n n ruditapes_c7840 -1.483 0.824 0.806 0.543 n n n ruditapes_c29245 -1.483 0.824 0.805 0.543 n n n ruditapes_c28740 1.649 0.824 riken cdna isoform cra_a 0.304 0.502 n y n ruditapes_lrc6911 -1.529 0.824 0.709 0.464 n y n ruditapes_c24305 -1.54 0.824 0.683 0.444 n y n ruditapes_c23295 2.024 0.824 0.14 0.284 n y n ruditapes_lrc38809 2.248 0.824 0.102 0.229 n y n ruditapes_c26625 2.248 0.824 0.101 0.228 n y n ruditapes_c8654 -1.906 0.824 0.342 0.179 n y n ruditapes_s38740 -2.224 0.824 0.241 0.108 n y n ruditapes2_c4482 -2.224 0.824 0.24 0.108 n y n ruditapes_c19702 -2.224 0.824 0.24 0.108 n y n ruditapes_c7620 -2.224 0.824 0.24 0.108 n y n ruditapes_lrc26332 -2.224 0.824 protein 0.24 0.108 n y n ruditapes_s39357 -2.224 0.824 0.24 0.108 n y n ruditapes2_c970 ? 0.824 0 0.05 n y n ruditapes_c11340 ? 0.824 0 0.05 n y n ruditapes_c22788 ? 0.824 hippocalcin-like 1 0 0.05 n y n ruditapes_c24674 ? 0.824 0 0.05 n y n ruditapes_c28880 ? 0.824 0 0.05 n y n ruditapes_s36754 ? 0.824 0 0.05 n y n ruditapes_c14455 ? 0.824 0 0.049 n y n ruditapes_c24916 ? 0.824 0 0.049 n y n ruditapes_c26574 ? 0.824 developmentally-regulated vdg3 0 0.049 n y n ruditapes_c27767 ? 0.824 0 0.049 n y n ruditapes_c2872 ? 0.824 0 0.049 n y n ruditapes_c29546 ? 0.824 0 0.049 n y n ruditapes_c3483 ? 0.824 unknown protein 9 [Haliotis diversicolor] 0 0.049 n y n ruditapes_s38933 ? 0.824 0 0.049 n y n ruditapes_c14414 -? 0.824 0.05 0 n y n ruditapes_lrc29767 -? 0.824 0.05 0 n y n ruditapes_lrc9820 -? 0.824 0.049 0 n y n ruditapes_c9100 1.104 0.825 8.354 9.22 n n n ruditapes2_lrc2613 -1.161 0.825 5.172 4.453 n n n ruditapes_c2047 1.162 0.825 3.656 4.249 n n n ruditapes2_c2192 1.166 0.825 hemicentin 1 3.532 4.117 n n n ruditapes_c8057 -1.194 0.825 3.658 3.063 n n n ruditapes_c4934 1.21 0.825 2.303 2.785 n n n ruditapes_c16224 1.21 0.825 2.284 2.762 n n n ruditapes_c22980 -1.207 0.825 3.253 2.695 n n n ruditapes_c10243 -1.248 0.825 2.369 1.898 n n n ruditapes_c30470 1.274 0.825 1.403 1.788 n n n ruditapes_c12312 1.349 0.825 0.907 1.224 n n n ruditapes_c28911 -1.334 0.825 hepatic leukemia factor /// 0043129 // surfactant homeostasis /// 0003700 // transcription factor activity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0043565 // sequence-specific DNA binding /// 0001892 // embryonic placenta development /// 0001525 // angiogenesis /// 0003690 // double-stranded DNA binding /// 0007601 // visual perception /// 0046982 // protein heterodimerization activity /// 0001666 // response to hypoxia /// 0043619 // regulation of transcription from RNA polymerase II promoter in response to oxidative stress /// 0004871 // signal transducer activity /// 0048511 // rhythmic process /// 0005667 // transcription factor complex /// 0001974 // blood vessel remodeling /// 0005737 // cytoplasm /// 0030324 // lung development /// 0007005 // mitochondrion organization /// 0042415 // norepinephrine metabolic process /// 0030218 // erythrocyte differentiation /// 0008134 // transcription factor binding /// 0048469 // cell maturation /// 0007165 // signal transduction /// 0002027 // regulation of heart rate 1.432 1.073 n n n ruditapes_c15896 1.399 0.825 0.706 0.987 n n n ruditapes_c24268 1.649 0.825 0.301 0.497 n y n ruditapes_c3957 1.649 0.825 eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) /// 0009987 // cellular process 0.299 0.493 n y n ruditapes_c7986 1.799 0.825 agrin /// 0007154 // cell communication /// 0044421 // extracellular region part 0.209 0.376 n y n ruditapes_c8819 -1.711 0.825 si:rp71- protein 0.459 0.268 n y n ruditapes_c23929 -1.779 0.825 0.408 0.229 n y n ruditapes_c26720 2.248 0.825 novel protein dna polymerases 0.101 0.226 n y n ruditapes_c36086 2.698 0.825 heterogeneous nuclear ribonucleoprotein 27c /// 0030529 // ribonucleoprotein complex /// 0003676 // nucleic acid binding /// 0000166 // nucleotide binding 0.062 0.167 n y n ruditapes_s36287 -2.224 0.825 unnamed protein product [Tetraodon nigroviridis] 0.238 0.107 n y n ruditapes_c20971 -2.224 0.825 0.237 0.107 n y n ruditapes2_c1199 ? 0.825 cathepsin k 0 0.049 n y n ruditapes2_c2669 ? 0.825 0 0.049 n y n ruditapes2_lrc6154 ? 0.825 ncan protein /// 0005488 // binding 0 0.049 n y n ruditapes_c16767 ? 0.825 0 0.049 n y n ruditapes_c21867 ? 0.825 0 0.049 n y n ruditapes_c23335 ? 0.825 0 0.049 n y n ruditapes_c25224 ? 0.825 0 0.049 n y n ruditapes_c28737 ? 0.825 0 0.049 n y n ruditapes_c29235 ? 0.825 0 0.049 n y n ruditapes_c29866 ? 0.825 0 0.049 n y n ruditapes_c400 ? 0.825 0 0.049 n y n ruditapes_c8157 ? 0.825 0 0.049 n y n ruditapes_c8728 ? 0.825 0 0.049 n y n ruditapes_lrc38177 ? 0.825 0 0.049 n y n ruditapes_s34767 ? 0.825 0 0.049 n y n ruditapes2_c1775 -4.448 0.825 myb domain-containing protein 0.1 0.023 n y n ruditapes_c1190 -? 0.825 0.049 0 n y n ruditapes_c3 -? 0.825 0.049 0 n y n ruditapes_c5491 -? 0.825 protein /// 0005488 // binding 0.049 0 n y n ruditapes_c13422 -1.075 0.826 22.971 21.36 n n n ruditapes2_c1018 -1.093 0.826 15.042 13.766 n n n ruditapes2_c6080 1.084 0.826 12.036 13.049 n n n ruditapes_c92 -1.12 0.826 8.916 7.958 n n n ruditapes2_c3834 1.127 0.826 5.737 6.464 n n n ruditapes_c8453 1.134 0.826 5.23 5.928 n n n ruditapes_lrc28045 1.144 0.826 4.542 5.194 n n n ruditapes_lrc18069 1.157 0.826 mitochondrial cytochrome c oxidase subunit 5a "/// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0004129 // cytochrome-c oxidase activity /// 0006123 // mitochondrial electron transport, cytochrome c to oxygen /// 0005751 // mitochondrial respiratory chain complex IV" 3.88 4.489 n n n ruditapes2_c162 1.18 0.826 beta- -glucanase 3.024 3.568 n n n ruditapes_c28230 -1.223 0.826 2.841 2.323 n n n ruditapes2_c2392 1.244 0.826 1.715 2.133 n n n ruditapes_c15636 1.314 0.826 prosaposin /// 0005739 // mitochondrion 1.081 1.422 n n n ruditapes2_c1952 -1.287 0.826 1.822 1.415 n n n ruditapes_c10330 -1.305 0.826 1.646 1.261 n n n ruditapes2_c1032 1.349 0.826 0.887 1.197 n n n ruditapes2_lrc4264 1.377 0.826 scavenger receptor cysteine-rich protein partial 0.773 1.064 n n n ruditapes_lrc19701 -1.354 0.826 1.284 0.949 n n n ruditapes2_c1725 -1.377 0.826 1.157 0.84 n n n ruditapes2_c552 -1.415 0.826 0.991 0.7 n n n ruditapes_c21166 -1.439 0.826 0.911 0.633 n n n ruditapes_c17631 -1.483 0.826 0.791 0.533 n n n ruditapes_c28300 1.799 0.826 tkl family protein kinase 0.208 0.375 n y n ruditapes_c15372 -1.588 0.826 0.592 0.373 n y n ruditapes_c9505 -1.617 0.826 0.553 0.342 n y n ruditapes_c31418 2.248 0.826 0.099 0.222 n y n ruditapes_c20317 -2.224 0.826 0.234 0.105 n y n ruditapes_c21898 ? 0.826 0 0.049 n y n ruditapes_c23266 ? 0.826 inwardly rectifying k+ /// 0006811 // ion transport /// 0016020 // membrane /// 0005244 // voltage-gated ion channel activity 0 0.049 n y n ruditapes_c24528 ? 0.826 0 0.049 n y n ruditapes_c26982 ? 0.826 0 0.049 n y n ruditapes_c28167 ? 0.826 0 0.049 n y n ruditapes_c6980 ? 0.826 tissue factor pathway inhibitor a 0 0.049 n y n ruditapes2_c392 ? 0.826 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0 0.048 n y n ruditapes_c19083 ? 0.826 peptidoglycan recognition protein 2 precursor 0 0.048 n y n ruditapes_c23953 ? 0.826 twister 0 0.048 n y n ruditapes_c24484 ? 0.826 0 0.048 n y n ruditapes_c30871 ? 0.826 0 0.048 n y n ruditapes_c31788 ? 0.826 0 0.048 n y n ruditapes_c5487 ? 0.826 c-type lectin 0 0.048 n y n ruditapes_c6209 ? 0.826 0 0.048 n y n ruditapes_c9010 ? 0.826 0 0.048 n y n ruditapes_s34852 ? 0.826 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0 0.048 n y n ruditapes_s35299 ? 0.826 0 0.048 n y n ruditapes_s36539 ? 0.826 0 0.048 n y n ruditapes_s38303 ? 0.826 dopamine beta hydroxylase-like protein /// 0003824 // catalytic activity 0 0.048 n y n ruditapes_s38576 ? 0.826 0 0.048 n y n ruditapes_c14333 -4.448 0.826 0.099 0.022 n y n ruditapes_c27806 -? 0.826 0.049 0 n y n ruditapes_c1044 -? 0.826 0.048 0 n y n ruditapes_c31547 -? 0.826 0.048 0 n y n ruditapes_c3809 -? 0.826 asialoglycoprotein receptor 1 /// 0005488 // binding 0.048 0 n y n ruditapes_c9122 -1.047 0.827 65.401 62.49 n n n ruditapes_c5470 -1.092 0.827 15.259 13.978 n n n ruditapes_c11513 -1.153 0.827 5.586 4.844 n n n ruditapes2_c1561 -1.153 0.827 endothelial differentiation-related factor 1 "/// 0007417 // central nervous system development /// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0005516 // calmodulin binding /// 0048813 // dendrite morphogenesis /// 0008327 // methyl-CpG binding /// 0045446 // endothelial cell differentiation /// 0003713 // transcription coactivator activity /// 0008168 // methyltransferase activity /// 0007424 // open tracheal system development /// 0005669 // transcription factor TFIID complex /// 0019216 // regulation of lipid metabolic process /// 0004402 // histone acetyltransferase activity /// 0005737 // cytoplasm /// 0043388 // positive regulation of DNA binding" 5.568 4.829 n n n ruditapes_lrc26210 -1.155 0.827 5.445 4.713 n n n ruditapes2_c5647 1.168 0.827 prefoldin subunit 1 /// 0003700 // transcription factor activity /// 0016272 // prefoldin complex /// 0005886 // plasma membrane /// 0007049 // cell cycle /// 0051082 // unfolded protein binding /// 0006457 // protein folding 3.389 3.957 n n n ruditapes2_c781 -1.178 0.827 clathrin light polypeptide /// 0016020 // membrane /// 0005515 // protein binding 4.195 3.561 n n n ruditapes_c13731 -1.189 0.827 3.758 3.161 n n n ruditapes_c28072 1.267 0.827 1.428 1.809 n n n ruditapes_lrc36261 1.314 0.827 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.061 1.394 n n n ruditapes_c30829 -1.311 0.827 predicted protein [Nematostella vectensis] 1.561 1.19 n n n ruditapes_c21374 -1.334 0.827 1.393 1.044 n n n ruditapes_lrc25646 -1.39 0.827 1.09 0.784 n n n ruditapes_lrc24095 1.499 0.827 0.462 0.693 n n n ruditapes_s37070 -1.43 0.827 0.933 0.653 n n n ruditapes_c4692 -1.45 0.827 0.872 0.601 n n n ruditapes_c15984 -1.483 0.827 0.778 0.525 n n n ruditapes_lrc33163 1.649 0.827 caveolin 3 /// 0030315 // T-tubule /// 0065009 // regulation of molecular function /// 0005901 // caveola /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0016049 // cell growth /// 0003012 // muscle system process /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0048513 // organ development /// 0008016 // regulation of heart contraction /// 0048468 // cell development /// 0009986 // cell surface /// 0007204 // elevation of cytosolic calcium ion concentration /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0009790 // embryonic development 0.293 0.483 n y n ruditapes_c16088 -1.522 0.827 caffeoyl- o-methyltransferase /// 0008171 // O-methyltransferase activity 0.691 0.454 n y n ruditapes_c13976 -1.73 0.827 saccharopine dehydrogenase "/// 0055114 // oxidation reduction /// 0019477 // L-lysine catabolic process /// 0005739 // mitochondrion /// 0005488 // binding /// 0047131 // saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity /// 0009055 // electron carrier activity /// 0047130 // saccharopine dehydrogenase (NADP+, L-lysine-forming) activity" 0.436 0.252 n y n ruditapes2_c2427 -2.224 0.827 0.233 0.105 n y n ruditapes_c16600 -2.224 0.827 0.232 0.105 n y n ruditapes_c18349 -2.224 0.827 0.232 0.104 n y n ruditapes_lrc27251 -2.224 0.827 0.232 0.104 n y n ruditapes_c24333 -2.224 0.827 0.231 0.104 n y n ruditapes2_c2345 -2.78 0.827 protein /// 0005488 // binding 0.161 0.058 n y n ruditapes2_c2842 ? 0.827 0 0.048 n y n ruditapes2_c307 ? 0.827 whey acidic protein precursor 0 0.048 n y n ruditapes_c11446 ? 0.827 hephaestin /// 0046914 // transition metal ion binding /// 0005576 // extracellular region /// 0006810 // transport /// 0016491 // oxidoreductase activity 0 0.048 n y n ruditapes_c13072 ? 0.827 0 0.048 n y n ruditapes_c14187 ? 0.827 0 0.048 n y n ruditapes_c14874 ? 0.827 0 0.048 n y n ruditapes_c1714 ? 0.827 0 0.048 n y n ruditapes_c18183 ? 0.827 0 0.048 n y n ruditapes_c19484 ? 0.827 nucleoporin 205kda "/// 0005643 // nuclear pore /// 0005515 // protein binding /// 0000059 // protein import into nucleus, docking" 0 0.048 n y n ruditapes_c25233 ? 0.827 0 0.048 n y n ruditapes_c26945 ? 0.827 0 0.048 n y n ruditapes_c27483 ? 0.827 0 0.048 n y n ruditapes_c28697 ? 0.827 0 0.048 n y n ruditapes_c28962 ? 0.827 0 0.048 n y n ruditapes_c29969 ? 0.827 0 0.048 n y n ruditapes_c31820 ? 0.827 0 0.048 n y n ruditapes_c6798 ? 0.827 0 0.048 n y n ruditapes_c8221 ? 0.827 0 0.048 n y n ruditapes_lrc23731 ? 0.827 0 0.048 n y n ruditapes_s37113 ? 0.827 60s ribosomal protein rpl6 0 0.048 n y n ruditapes_c30985 -? 0.827 0.048 0 n y n ruditapes_lrc35269 1.07 0.828 ribosomal protein l12 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 16.261 17.408 n n n ruditapes_lrc18617 1.093 0.828 9.892 10.813 n n n ruditapes_lrc22042 -1.148 0.828 5.871 5.114 n n n ruditapes_c10065 1.144 0.828 4.47 5.112 n n n ruditapes_c10739 1.184 0.828 2.806 3.323 n n n ruditapes_c815 -1.187 0.828 3.813 3.213 n n n ruditapes_c25523 1.193 0.828 2.583 3.083 n n n ruditapes_c11507 -1.219 0.828 2.862 2.349 n n n ruditapes_c13166 -1.221 0.828 mgc83231 protein /// 0003676 // nucleic acid binding 2.807 2.299 n n n ruditapes_c20158 -1.271 0.828 1.975 1.554 n n n ruditapes_c22877 -1.334 0.828 1.378 1.033 n n n ruditapes2_c222 1.388 0.828 transforming growth beta- 68kda /// 0044421 // extracellular region part 0.719 0.998 n n n ruditapes_c20226 1.399 0.828 0.685 0.958 n n n ruditapes_c30170 -1.404 0.828 jerky homolog /// 0044424 // intracellular part 1.018 0.725 n n n ruditapes2_lrc5643 -1.445 0.828 0.867 0.6 n n n ruditapes_c17961 -1.483 0.828 0.771 0.52 n n n ruditapes_c24887 1.649 0.828 0.289 0.477 n y n ruditapes_c21019 -1.557 0.828 0.624 0.401 n y n ruditapes2_c4524 -1.668 0.828 0.485 0.291 n y n ruditapes_c17817 -1.668 0.828 glutathione s-transferase theta 1 /// 0003824 // catalytic activity /// 0044424 // intracellular part 0.484 0.29 n y n ruditapes_c5364 -1.668 0.828 0.484 0.29 n y n ruditapes_lrc35819 -1.668 0.828 0.481 0.289 n y n ruditapes_lrc15764 2.248 0.828 0.097 0.217 n y n ruditapes_lrc33504 -2.224 0.828 ependymin related protein-1 precursor 0.23 0.103 n y n ruditapes_c12250 ? 0.828 0 0.047 n y n ruditapes_c21935 ? 0.828 0 0.047 n y n ruditapes_c26708 ? 0.828 0 0.047 n y n ruditapes_c5347 ? 0.828 0 0.047 n y n ruditapes_c9627 ? 0.828 0 0.047 n y n ruditapes_s38224 ? 0.828 0 0.047 n y n ruditapes2_c1302 -? 0.828 vitelline membrane outer layer 1 homolog 0.047 0 n y n ruditapes2_c646 -? 0.828 0.047 0 n y n ruditapes2_lrc5627 -? 0.828 mantle gene 4 0.047 0 n y n ruditapes_c1223 -1.072 0.829 serine protease inhibitor 2 24.44 22.799 n n n ruditapes2_c2059 -1.135 0.829 6.956 6.131 n n n ruditapes_c15580 1.135 0.829 4.976 5.645 n n n ruditapes_c18344 -1.216 0.829 cg10542 cg10542-pa /// 0005515 // protein binding /// 0008270 // zinc ion binding /// 0016874 // ligase activity 2.874 2.363 n n n ruditapes_c11270 -1.219 0.829 activating signal cointegrator 1 complex subunit 1 2.801 2.297 n n n ruditapes_c29368 -1.245 0.829 cyclin d2 /// 0014070 // response to organic cyclic substance /// 0048593 // camera-type eye morphogenesis /// 0019901 // protein kinase binding /// 0045664 // regulation of neuron differentiation /// 0001541 // ovarian follicle development /// 0045471 // response to ethanol /// 0045737 // positive regulation of cyclin-dependent protein kinase activity /// 0033574 // response to testosterone stimulus /// 0050679 // positive regulation of epithelial cell proliferation /// 0001889 // liver development /// 0000082 // G1/S transition of mitotic cell cycle /// 0007283 // spermatogenesis /// 0000307 // cyclin-dependent protein kinase holoenzyme complex /// 0032355 // response to estradiol stimulus /// 0001934 // positive regulation of protein amino acid phosphorylation /// 0051591 // response to cAMP /// 0032869 // cellular response to insulin stimulus 2.304 1.85 n n n ruditapes_lrc18711 1.27 0.829 1.378 1.75 n n n ruditapes_c19328 -1.304 0.829 1.602 1.229 n n n ruditapes_c14164 -1.308 0.829 1.569 1.199 n n n ruditapes_c10583 -1.334 0.829 alcohol dehydrogenase class-3 1.37 1.027 n n n ruditapes_c7389 -1.363 0.829 1.193 0.875 n n n ruditapes_c30404 -1.445 0.829 0.86 0.595 n n n ruditapes_c10361 -1.483 0.829 0.767 0.517 n n n ruditapes_c19058 -1.668 0.829 0.475 0.285 n y n ruditapes_c13330 2.024 0.829 0.132 0.268 n y n ruditapes_lrc33785 2.698 0.829 nucleoside diphosphate kinase /// 0009201 // ribonucleoside triphosphate biosynthetic process /// 0005488 // binding /// 0016740 // transferase activity 0.059 0.16 n y n ruditapes_c8446 2.698 0.829 0.059 0.159 n y n ruditapes_c16720 -2.224 0.829 nicotinic acetylcholine receptor alpha subunit precursor /// 0044425 // membrane part /// 0045202 // synapse /// 0006810 // transport /// 0005886 // plasma membrane /// 0005230 // extracellular ligand-gated ion channel activity /// 0004872 // receptor activity 0.228 0.103 n y n ruditapes2_c4657 -2.224 0.829 0.226 0.102 n y n ruditapes_c11393 ? 0.829 sodium potassium-transporting atpase subunit beta-233 0 0.047 n y n ruditapes_c12162 ? 0.829 0 0.047 n y n ruditapes_c22054 ? 0.829 0 0.047 n y n ruditapes_c23433 ? 0.829 0 0.047 n y n ruditapes_c28907 ? 0.829 0 0.047 n y n ruditapes_c30515 ? 0.829 0 0.047 n y n ruditapes_c31467 ? 0.829 0 0.047 n y n ruditapes_s39227 ? 0.829 0 0.047 n y n ruditapes2_c1244 ? 0.829 0 0.046 n y n ruditapes_c14040 ? 0.829 0 0.046 n y n ruditapes_c8621 ? 0.829 protein /// 0030170 // pyridoxal phosphate binding /// 0005739 // mitochondrion /// 0019148 // D-cysteine desulfhydrase activity /// 0008152 // metabolic process /// 0046686 // response to cadmium ion 0 0.046 n y n ruditapes_s38286 ? 0.829 0 0.046 n y n ruditapes2_c6406 -? 0.829 chymotrypsin b1 /// 0016787 // hydrolase activity 0.047 0 n y n ruditapes_c30850 -? 0.829 hypothetical protein [Plasmodium yoelii yoelii str. 17XNL] 0.047 0 n y n ruditapes_lrc33610 -? 0.829 0.047 0 n y n ruditapes_c26265 1.115 0.83 6.478 7.225 n n n ruditapes_c10481 -1.159 0.83 4.967 4.284 n n n ruditapes2_c2446 1.167 0.83 3.294 3.844 n n n ruditapes2_c867 -1.179 0.83 4.018 3.408 n n n ruditapes_c25341 -1.24 0.83 2.356 1.9 n n n ruditapes_c3894 -1.248 0.83 cytochrome b5 /// 0004768 // stearoyl-CoA 9-desaturase activity /// 0006810 // transport /// 0022900 // electron transport chain /// 0005789 // endoplasmic reticulum membrane /// 0020037 // heme binding /// 0004033 // aldo-keto reductase activity /// 0006631 // fatty acid metabolic process /// 0016021 // integral to membrane /// 0046686 // response to cadmium ion /// 0005792 // microsome /// 0009055 // electron carrier activity /// 0005741 // mitochondrial outer membrane 2.239 1.794 n n n ruditapes_c23154 1.274 0.83 1.322 1.685 n n n ruditapes_lrc21367 1.413 0.83 serine proteinase 0.626 0.885 n n n ruditapes_c26619 1.461 0.83 0.517 0.756 n n n ruditapes_c11793 1.499 0.83 0.449 0.672 n n n ruditapes_c24646 -1.43 0.83 0.901 0.63 n n n ruditapes2_c1465 1.574 0.83 neurogenic locus notch 0.351 0.553 n y n ruditapes_c20311 1.574 0.83 0.351 0.552 n y n ruditapes_lrc39471 -1.54 0.83 0.642 0.417 n y n ruditapes_c17365 -1.54 0.83 0.639 0.415 n y n ruditapes_c9855 2.024 0.83 0.13 0.263 n y n ruditapes_c14166 -1.853 0.83 0.342 0.185 n y n ruditapes2_c288 -1.906 0.83 usher syndrome 1g homolog /// 0007605 // sensory perception of sound /// 0042472 // inner ear morphogenesis /// 0016020 // membrane /// 0015629 // actin cytoskeleton /// 0045494 // photoreceptor cell maintenance /// 0050957 // equilibrioception /// 0005737 // cytoplasm /// 0060113 // inner ear receptor cell differentiation /// 0042803 // protein homodimerization activity 0.318 0.167 n y n ruditapes_c4666 -2.224 0.83 0.223 0.1 n y n ruditapes_lrc8857 -2.224 0.83 0.223 0.1 n y n ruditapes_c11623 ? 0.83 matrilin 3 0 0.046 n y n ruditapes_c15888 ? 0.83 0 0.046 n y n ruditapes_c16117 ? 0.83 0 0.046 n y n ruditapes_c16248 ? 0.83 0 0.046 n y n ruditapes_c22246 ? 0.83 0 0.046 n y n ruditapes_c24760 ? 0.83 0 0.046 n y n ruditapes_c25177 ? 0.83 0 0.046 n y n ruditapes_c28024 ? 0.83 0 0.046 n y n ruditapes_c28839 ? 0.83 0 0.046 n y n ruditapes_c31379 ? 0.83 0 0.046 n y n ruditapes_lrc15149 ? 0.83 0 0.046 n y n ruditapes_lrc36372 ? 0.83 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.046 n y n ruditapes_s36761 ? 0.83 eukaryotic translation initiation factor 3 subunit 3 0 0.046 n y n ruditapes_s39573 ? 0.83 0 0.046 n y n ruditapes_s39705 ? 0.83 tryptase beta 2 /// 0008201 // heparin binding /// 0006952 // defense response /// 0005515 // protein binding /// 0008233 // peptidase activity 0 0.046 n y n ruditapes_c3296 -3.336 0.83 vitelline membrane outer layer 1 homolog 0.124 0.037 n y n ruditapes_c4882 -3.336 0.83 angiopoietin-like 2 0.124 0.037 n y n ruditapes_lrc33945 -4.448 0.83 0.095 0.021 n y n ruditapes_c23466 1.057 0.831 22.919 24.226 n n n ruditapes_c10125 1.111 0.831 6.935 7.704 n n n ruditapes_c17645 -1.14 0.831 hydrocephalus inducing 6.276 5.505 n n n ruditapes_c25882 1.179 0.831 2.878 3.393 n n n ruditapes_c20858 -1.197 0.831 3.322 2.775 n n n ruditapes_c20343 1.232 0.831 1.771 2.182 n n n ruditapes_c17783 -1.235 0.831 annexin a4 /// 0005544 // calcium-dependent phospholipid binding /// 0005509 // calcium ion binding 2.432 1.969 n n n ruditapes_c15671 -1.245 0.831 2.256 1.812 n n n ruditapes_c19131 -1.251 0.831 2.166 1.732 n n n ruditapes_c11060 -1.271 0.831 pancreatic lipase-related protein 3 1.909 1.502 n n n ruditapes_c17959 -1.297 0.831 1.617 1.247 n n n ruditapes_lrc38240 -1.359 0.831 ribosomal protein s8 /// 0005811 // lipid particle /// 0030529 // ribonucleoprotein complex 1.188 0.874 n n n ruditapes_c27872 1.461 0.831 0.506 0.74 n n n ruditapes_c29098 1.574 0.831 glutamate synthase /// 0017113 // dihydropyrimidine dehydrogenase (NADP+) activity /// 0050660 // FAD binding /// 0055114 // oxidation reduction /// 0002119 // nematode larval development /// 0010181 // FMN binding /// 0040010 // positive regulation of growth rate /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0016040 // glutamate synthase (NADH) activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0051536 // iron-sulfur cluster binding /// 0006537 // glutamate biosynthetic process 0.345 0.543 n y n ruditapes_c27494 -1.483 0.831 0.748 0.505 n n n ruditapes_c21441 -1.483 0.831 nuclear protein hcc- 0.742 0.501 n n n ruditapes_c19626 1.799 0.831 0.195 0.351 n y n ruditapes_c23110 1.799 0.831 0.195 0.35 n y n ruditapes_c3834 -1.711 0.831 0.428 0.25 n y n ruditapes_s39234 -1.779 0.831 0.382 0.214 n y n ruditapes_c19760 2.698 0.831 0.057 0.155 n y n ruditapes_s37622 -2.224 0.831 0.222 0.1 n y n ruditapes_c13254 ? 0.831 0 0.046 n y n ruditapes_c13997 ? 0.831 0 0.046 n y n ruditapes_c14562 ? 0.831 0 0.046 n y n ruditapes_c19403 ? 0.831 0 0.046 n y n ruditapes_c23420 ? 0.831 0 0.046 n y n ruditapes_c29635 ? 0.831 0 0.046 n y n ruditapes_c4713 ? 0.831 0 0.046 n y n ruditapes_c8995 ? 0.831 immunoevasive protein-2 0 0.046 n y n ruditapes_s35635 ? 0.831 0 0.046 n y n ruditapes_s39709 ? 0.831 0 0.046 n y n ruditapes_c21261 ? 0.831 0 0.045 n y n ruditapes_c3320 ? 0.831 0 0.045 n y n ruditapes_lrc28818 ? 0.831 amyloid protein a 0 0.045 n y n ruditapes_lrc34233 ? 0.831 angiopoietin-like 2 0 0.045 n y n ruditapes_s38446 ? 0.831 0 0.045 n y n ruditapes_s39666 ? 0.831 0 0.045 n y n ruditapes2_c3242 -? 0.831 0.045 0 n y n ruditapes_c24199 1.081 0.832 12.057 13.032 n n n ruditapes_c18930 1.085 0.832 10.978 11.914 n n n ruditapes_c17074 1.087 0.832 10.544 11.462 n n n ruditapes2_c2518 1.108 0.832 7.159 7.933 n n n ruditapes2_c283 -1.151 0.832 5.398 4.692 n n n ruditapes_c22302 -1.195 0.832 3.376 2.825 n n n ruditapes2_c607 -1.211 0.832 membrane alanine aminopeptidase /// 0031983 // vesicle lumen /// 0005793 // ER-Golgi intermediate compartment /// 0006508 // proteolysis /// 0042277 // peptide binding /// 0008237 // metallopeptidase activity /// 0004177 // aminopeptidase activity /// 0005625 // soluble fraction /// 0012506 // vesicle membrane /// 0005887 // integral to plasma membrane /// 0006725 // cellular aromatic compound metabolic process /// 0004872 // receptor activity 2.921 2.411 n n n ruditapes_c29396 -1.227 0.832 2.567 2.093 n n n ruditapes_c10205 -1.264 0.832 conserved hypothetical protein [Pediculus humanus corporis] 1.969 1.558 n n n ruditapes_c12101 -1.279 0.832 cg8067 cg8067-pa /// 0005739 // mitochondrion /// 0008168 // methyltransferase activity /// 0016020 // membrane /// 0008152 // metabolic process 1.778 1.391 n n n ruditapes_s38196 1.439 0.832 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 0.551 0.793 n n n ruditapes2_c7271 1.461 0.832 porin precursor 0.503 0.735 n n n ruditapes_c6916 -1.404 0.832 liprin alpha (lar-interacting protein alpha) (synapse defective protein 2) /// 0045202 // synapse /// 0048490 // anterograde synaptic vesicle transport /// 0016491 // oxidoreductase activity /// 0007412 // axon target recognition /// 0008594 // photoreceptor cell morphogenesis /// 0031290 // retinal ganglion cell axon guidance /// 0007416 // synaptogenesis /// 0045467 // R7 cell development 0.961 0.684 n n n ruditapes_lrc34095 1.542 0.832 0.38 0.585 n y n ruditapes_c18417 1.574 0.832 0.341 0.537 n y n ruditapes2_c3796 1.606 0.832 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.312 0.501 n y n ruditapes_c11535 -1.483 0.832 0.733 0.495 n n n ruditapes2_c2064 1.686 0.832 dnase domain containing 1 0.251 0.423 n y n ruditapes_c23739 1.799 0.832 0.193 0.348 n y n ruditapes2_c5986 1.799 0.832 0.193 0.347 n y n ruditapes_lrc37493 -1.668 0.832 hematopoietic stem progenitor cells /// 0048471 // perinuclear region of cytoplasm /// 0046872 // metal ion binding /// 0016020 // membrane /// 0005783 // endoplasmic reticulum /// 0051536 // iron-sulfur cluster binding 0.462 0.277 n y n ruditapes_c8923 -1.668 0.832 0.461 0.277 n y n ruditapes_c12742 -1.668 0.832 0.461 0.276 n y n ruditapes_c31966 -1.779 0.832 0.374 0.21 n y n ruditapes_lrc32791 2.248 0.832 0.093 0.209 n y n ruditapes_c5633 -2.224 0.832 0.219 0.098 n y n ruditapes_c26671 ? 0.832 0 0.045 n y n ruditapes_c28013 ? 0.832 0 0.045 n y n ruditapes_c29324 ? 0.832 0 0.045 n y n ruditapes_c30785 ? 0.832 ken_drops ame: full=transcription factor ken ame: full=protein ken and barbie 0 0.045 n y n ruditapes_lrc38764 ? 0.832 0 0.045 n y n ruditapes_s37371 ? 0.832 0 0.045 n y n ruditapes_s38279 ? 0.832 0 0.045 n y n ruditapes2_c1139 -? 0.832 protein 0.045 0 n y n ruditapes2_c1526 -? 0.832 0.045 0 n y n ruditapes_c4293 -? 0.832 0.045 0 n y n ruditapes_c4824 -1.124 0.833 7.818 6.958 n n n ruditapes_c23933 -1.142 0.833 6.01 5.263 n n n ruditapes_c16320 -1.146 0.833 5.729 5.001 n n n ruditapes2_c2556 1.186 0.833 2.604 3.087 n n n ruditapes_c11927 -1.197 0.833 rho gdp dissociation inhibitor alpha /// 0007266 // Rho protein signal transduction /// 0005856 // cytoskeleton /// 0006916 // anti-apoptosis /// 0042802 // identical protein binding /// 0005094 // Rho GDP-dissociation inhibitor activity /// 0001772 // immunological synapse /// 0007162 // negative regulation of cell adhesion /// 0006928 // cell motion /// 0032880 // regulation of protein localization 3.241 2.707 n n n ruditapes_lrc35564 -1.235 0.833 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 2.377 1.924 n n n ruditapes_s39783 1.249 0.833 1.511 1.887 n n n ruditapes_lrc15800 1.259 0.833 1.41 1.775 n n n ruditapes_c6998 1.319 0.833 chondroitin sulfate proteoglycan 2 0.967 1.275 n n n ruditapes_c25525 1.349 0.833 0.821 1.108 n n n ruditapes_c24049 -1.423 0.833 0.885 0.622 n n n ruditapes2_c2966 1.606 0.833 selectin e 0.306 0.491 n y n ruditapes_s33143 -1.483 0.833 translationally controlled tumor protein 0.726 0.49 n n n ruditapes_c32959 1.649 0.833 domain containing protein 0.272 0.449 n y n ruditapes2_lrc3353 -1.529 0.833 0.634 0.415 n y n ruditapes_s37424 -1.557 0.833 proteasome ( macropain) beta 1 /// 0009987 // cellular process 0.585 0.376 n y n ruditapes_lrc9391 -1.588 0.833 serine proteinase 0.542 0.341 n y n ruditapes2_c3566 -1.668 0.833 0.453 0.272 n y n ruditapes_lrc34824 -1.73 0.833 serum amyloid a 0.403 0.233 n y n ruditapes2_c1580 -1.977 0.833 0.279 0.141 n y n ruditapes2_c3770 -2.224 0.833 tetraspanin 3 0.216 0.097 n y n ruditapes2_c3575 ? 0.833 0 0.045 n y n ruditapes_c14766 ? 0.833 0 0.045 n y n ruditapes_c27358 ? 0.833 0 0.045 n y n ruditapes_c28418 ? 0.833 0 0.045 n y n ruditapes_c4145 ? 0.833 0 0.045 n y n ruditapes_s37723 ? 0.833 0 0.045 n y n ruditapes_c13210 ? 0.833 0 0.044 n y n ruditapes_c24647 ? 0.833 0 0.044 n y n ruditapes_c27779 ? 0.833 protein "/// 0016020 // membrane /// 0044403 // symbiosis, encompassing mutualism through parasitism" 0 0.044 n y n ruditapes_lrc38943 ? 0.833 0 0.044 n y n ruditapes_s36577 ? 0.833 0 0.044 n y n ruditapes_s38087 ? 0.833 sarcoplasmic calcium-binding protein 0 0.044 n y n ruditapes_s38494 ? 0.833 0 0.044 n y n ruditapes_c17052 -4.448 0.833 0.091 0.02 n y n ruditapes2_lrc2707 -? 0.833 0.045 0 n y n ruditapes2_c242 -? 0.833 0.044 0 n y n ruditapes_c10517 1.124 0.834 5.401 6.072 n n n ruditapes_c31152 -1.139 0.834 6.113 5.366 n n n ruditapes2_c2275 -1.181 0.834 heat-responsive protein 12 /// 0004518 // nuclease activity /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0006449 // regulation of translational termination 3.751 3.175 n n n ruditapes_c27866 1.226 0.834 1.788 2.192 n n n ruditapes_c6915 -1.297 0.834 1.57 1.21 n n n ruditapes_c15831 1.349 0.834 0.811 1.094 n n n ruditapes_lrc15309 -1.359 0.834 ribosomal protein l27 /// 0006414 // translational elongation /// 0030529 // ribonucleoprotein complex /// 0005829 // cytosol 1.143 0.841 n n n ruditapes_s37152 -1.368 0.834 1.088 0.795 n n n ruditapes2_c5716 -1.377 0.834 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 1.063 0.772 n n n ruditapes_lrc32674 -1.439 0.834 0.827 0.575 n n n ruditapes2_c2460 -1.483 0.834 0.717 0.484 n n n ruditapes2_c987 1.709 0.834 sulfotransferase member 1 0.23 0.393 n y n ruditapes_lrc21784 -1.588 0.834 0.536 0.337 n y n ruditapes_c606 1.949 0.834 complement component q subcomponent-like 3 0.141 0.275 n y n ruditapes_c25460 -1.73 0.834 0.397 0.229 n y n ruditapes_c13169 -1.779 0.834 0.365 0.205 n y n ruditapes_c31683 2.248 0.834 0.091 0.204 n y n ruditapes_lrc32884 -1.853 0.834 hypothetical protein [Schistosoma mansoni] 0.326 0.176 n y n ruditapes_c29251 2.698 0.834 0.055 0.149 n y n ruditapes_c18984 -2.224 0.834 0.213 0.096 n y n ruditapes_c28174 -2.224 0.834 0.213 0.096 n y n ruditapes2_lrc4356 -2.224 0.834 0.212 0.096 n y n ruditapes2_c2320 ? 0.834 0 0.044 n y n ruditapes2_c596 ? 0.834 troponin c 0 0.044 n y n ruditapes_c10349 ? 0.834 0 0.044 n y n ruditapes_c13344 ? 0.834 0 0.044 n y n ruditapes_c15650 ? 0.834 0 0.044 n y n ruditapes_c17412 ? 0.834 deleted in malignant brain tumors 1 /// 0048856 // anatomical structure development /// 0007275 // multicellular organismal development /// 0009987 // cellular process /// 0044464 // cell part 0 0.044 n y n ruditapes_c17869 ? 0.834 0 0.044 n y n ruditapes_c26749 ? 0.834 0 0.044 n y n ruditapes_c27198 ? 0.834 0 0.044 n y n ruditapes_c29273 ? 0.834 0 0.044 n y n ruditapes_c4330 ? 0.834 suppression of tumorigenicity 14 (colon carcinoma) b 0 0.044 n y n ruditapes_c4562 ? 0.834 allograft inflammatory factor 0 0.044 n y n ruditapes_c8102 ? 0.834 0 0.044 n y n ruditapes_s38493 ? 0.834 0 0.044 n y n ruditapes2_c3308 -? 0.834 mgc82006 protein 0.044 0 n y n ruditapes2_c3513 1.064 0.835 17.893 19.037 n n n ruditapes_c24388 -1.104 0.835 y-box factor "/// 0006355 // regulation of transcription, DNA-dependent /// 0003677 // DNA binding" 10.711 9.701 n n n ruditapes2_lrc5636 1.122 0.835 5.512 6.183 n n n ruditapes_c6262 -1.131 0.835 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0006096 // glycolysis /// 0006098 // pentose-phosphate shunt /// 0006094 // gluconeogenesis 6.795 6.007 n n n ruditapes_c17304 -1.213 0.835 2.767 2.281 n n n ruditapes_c8661 1.223 0.835 isoform a 1.826 2.233 n n n ruditapes_c27176 1.242 0.835 1.564 1.942 n n n ruditapes_c13635 1.321 0.835 0.934 1.234 n n n ruditapes_c18815 1.413 0.835 0.593 0.838 n n n ruditapes_lrc28913 -1.39 0.835 0.986 0.709 n n n ruditapes_c19004 1.574 0.835 0.33 0.519 n y n ruditapes_c22015 -1.483 0.835 0.71 0.479 n n n ruditapes_c15064 -1.483 0.835 0.707 0.477 n n n ruditapes2_c1030 1.649 0.835 0.266 0.439 n y n ruditapes2_c663 -1.57 0.835 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 0.554 0.353 n y n ruditapes_c16938 1.799 0.835 laccase 1 0.187 0.336 n y n ruditapes_c2673 1.949 0.835 0.14 0.273 n y n ruditapes_lrc34613 2.024 0.835 0.123 0.25 n y n ruditapes_lrc35163 2.024 0.835 0.123 0.249 n y n ruditapes_c16604 2.024 0.835 0.123 0.248 n y n ruditapes_c19822 2.248 0.835 0.09 0.201 n y n ruditapes2_c2398 2.248 0.835 0.089 0.201 n y n ruditapes_c36195 2.248 0.835 cornifelin homolog a 0.089 0.201 n y n ruditapes2_c2251 2.248 0.835 gtp-binding nuclear protein /// 0007264 // small GTPase mediated signal transduction /// 0005524 // ATP binding /// 0015031 // protein transport /// 0006468 // protein amino acid phosphorylation /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0006856 // eye pigment precursor transport /// 0008057 // eye pigment granule organization /// 0004672 // protein kinase activity /// 0008355 // olfactory learning 0.089 0.199 n y n ruditapes_c7214 -1.853 0.835 0.323 0.174 n y n ruditapes_lrc35273 2.698 0.835 0.055 0.149 n y n ruditapes_lrc34965 2.698 0.835 nadh dehydrogenase 1 beta subcomplex 3 0.055 0.148 n y n ruditapes2_c2248 -2.224 0.835 0.211 0.095 n y n ruditapes2_lrc3681 ? 0.835 dynein light chain /// 0044444 // cytoplasmic part /// 0044430 // cytoskeletal part 0 0.043 n y n ruditapes_c1255 ? 0.835 fad fmn-containing protein 0 0.043 n y n ruditapes_s39738 ? 0.835 0 0.043 n y n ruditapes_c19593 -? 0.835 microneme protein 4 0.044 0 n y n ruditapes2_c3340 -? 0.835 isoform a 0.043 0 n y n ruditapes_c24689 -1.08 0.836 18.025 16.685 n n n ruditapes_lrc35022 -1.091 0.836 60s ribosomal protein l9 13.87 12.714 n n n ruditapes_c21380 -1.097 0.836 12.044 10.975 n n n ruditapes_c11672 -1.106 0.836 10.116 9.144 n n n ruditapes_c7680 -1.169 0.836 type alpha 3 /// 0044421 // extracellular region part 4.166 3.563 n n n ruditapes_c13008 -1.201 0.836 3.004 2.501 n n n ruditapes_c10524 -1.213 0.836 2.728 2.249 n n n ruditapes_c9151 -1.217 0.836 2.648 2.176 n n n ruditapes2_lrc4727 -1.221 0.836 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 2.563 2.099 n n n ruditapes_c15426 1.285 0.836 1.14 1.465 n n n ruditapes_c19423 1.314 0.836 0.957 1.258 n n n ruditapes_c20357 -1.291 0.836 "PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]" 1.576 1.221 n n n ruditapes_c14986 1.349 0.836 isochorismatase domain containing 1 /// 0005777 // peroxisome 0.793 1.07 n n n ruditapes_c27018 1.349 0.836 0.792 1.069 n n n ruditapes_c13317 -1.334 0.836 1.259 0.943 n n n ruditapes_c28731 1.384 0.836 0.668 0.925 n n n ruditapes_lrc32698 1.413 0.836 thioester-containing protein 0.581 0.821 n n n ruditapes2_c4367 1.461 0.836 odd oz ten-m homolog 3 0.481 0.703 n n n ruditapes_lrc8063 1.649 0.836 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.263 0.434 n y n ruditapes_c26000 -1.557 0.836 0.57 0.366 n y n ruditapes_c24501 1.799 0.836 0.184 0.331 n y n ruditapes2_lrc5035 1.799 0.836 serum amyloid a 0.183 0.33 n y n ruditapes_c5441 -2.224 0.836 0.209 0.094 n y n ruditapes2_c3073 -2.224 0.836 0.208 0.094 n y n ruditapes2_c1781 ? 0.836 0 0.043 n y n ruditapes2_lrc4201 ? 0.836 0 0.043 n y n ruditapes_c11141 ? 0.836 hypothetical protein BRAFLDRAFT_210652 [Branchiostoma floridae] 0 0.043 n y n ruditapes_c13991 ? 0.836 0 0.043 n y n ruditapes_c15341 ? 0.836 0 0.043 n y n ruditapes_c26106 ? 0.836 0 0.043 n y n ruditapes_c27184 ? 0.836 0 0.043 n y n ruditapes_c27315 ? 0.836 0 0.043 n y n ruditapes_c5705 ? 0.836 0 0.043 n y n ruditapes_c7266 ? 0.836 0 0.043 n y n ruditapes_s40130 ? 0.836 0 0.043 n y n ruditapes2_lrc4698 -4.448 0.836 0.088 0.02 n y n ruditapes2_c3989 -? 0.836 kazal-type serine proteinase inhibitor 0.043 0 n y n ruditapes_c6913 -1.062 0.837 30.484 28.703 n n n ruditapes_c17063 -1.117 0.837 8.309 7.439 n n n ruditapes_c21795 1.12 0.837 5.538 6.203 n n n ruditapes_c922 1.168 0.837 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0006096 // glycolysis /// 0006098 // pentose-phosphate shunt /// 0006094 // gluconeogenesis 2.975 3.475 n n n ruditapes_c21586 -1.186 0.837 3.438 2.898 n n n ruditapes_c2375 1.193 0.837 nadh dehydrogenase 1 alpha 19kda /// 0003954 // NADH dehydrogenase activity /// 0022900 // electron transport chain /// 0005743 // mitochondrial inner membrane 2.308 2.755 n n n ruditapes_c21314 -1.192 0.837 serca (sarco-endoplasmic reticulum calcium atpase) family member (sca-1) "/// 0005524 // ATP binding /// 0006816 // calcium ion transport /// 0031490 // chromatin DNA binding /// 0033017 // sarcoplasmic reticulum membrane /// 0006874 // cellular calcium ion homeostasis /// 0040007 // growth /// 0005624 // membrane fraction /// 0040024 // dauer larval development /// 0002026 // regulation of the force of heart contraction /// 0000003 // reproduction /// 0005515 // protein binding /// 0045822 // negative regulation of heart contraction /// 0008340 // determination of adult lifespan /// 0016021 // integral to membrane /// 0030104 // water homeostasis /// 0005388 // calcium-transporting ATPase activity /// 0018996 // molting cycle, collagen and cuticulin-based cuticle /// 0000287 // magnesium ion binding /// 0030968 // endoplasmic reticulum unfolded protein response /// 0005509 // calcium ion binding /// 0006937 // regulation of muscle contraction /// 0006754 // ATP biosynthetic process /// 0009792 // embryonic development ending in birth or egg hatching" 3.21 2.692 n n n ruditapes_c3247 1.209 0.837 iron storage protein h-ferritin /// 0046914 // transition metal ion binding /// 0065007 // biological regulation /// 0005515 // protein binding 2.005 2.423 n n n ruditapes2_c4067 -1.247 0.837 proteasome 26s subunit subunit 4 atpase /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005829 // cytosol 2.071 1.662 n n n ruditapes2_c2837 1.278 0.837 1.185 1.514 n n n ruditapes_c30184 1.325 0.837 proteasome ( macropain) beta type 4 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005813 // centrosome 0.892 1.182 n n n ruditapes_c16304 -1.308 0.837 1.407 1.076 n n n ruditapes_c11980 1.349 0.837 0.779 1.052 n n n ruditapes_c19882 1.574 0.837 0.32 0.503 n y n ruditapes_c25581 -1.483 0.837 0.696 0.469 n n n ruditapes_c17651 1.686 0.837 0.236 0.397 n y n ruditapes_s39318 -1.557 0.837 cytochrome c oxidase subunit va 0.558 0.359 n y n ruditapes2_c3094 1.799 0.837 cg32512 cg32512-pa 0.181 0.326 n y n ruditapes_c9940 2.248 0.837 cysteine dioxygenase /// 0055114 // oxidation reduction /// 0046439 // L-cysteine metabolic process /// 0000097 // sulfur amino acid biosynthetic process /// 0006954 // inflammatory response /// 0017172 // cysteine dioxygenase activity /// 0005829 // cytosol /// 0005506 // iron ion binding /// 0042412 // taurine biosynthetic process 0.087 0.196 n y n ruditapes_c24195 -2.224 0.837 0.206 0.093 n y n ruditapes_c33640 -2.224 0.837 0.206 0.093 n y n ruditapes_lrc31751 -2.224 0.837 0.205 0.092 n y n ruditapes_c1649 -2.965 0.837 defensin 0.131 0.044 n y n ruditapes_c1884 ? 0.837 0 0.043 n y n ruditapes_c30678 ? 0.837 hypothetical protein BRAFLDRAFT_66130 [Branchiostoma floridae] 0 0.043 n y n ruditapes_s39295 ? 0.837 0 0.043 n y n ruditapes2_c1913 ? 0.837 0 0.042 n y n ruditapes2_c2438 ? 0.837 complement component q subcomponent-like 4 0 0.042 n y n ruditapes_c15342 ? 0.837 0 0.042 n y n ruditapes_c7352 ? 0.837 0 0.042 n y n ruditapes_c8960 ? 0.837 0 0.042 n y n ruditapes_lrc11983 ? 0.837 0 0.042 n y n ruditapes_lrc38020 ? 0.837 predicted protein [Nematostella vectensis] 0 0.042 n y n ruditapes_c2115 -1.122 0.838 7.544 6.722 n n n ruditapes_c8342 -1.138 0.838 large low complexity coiled coil protien with large repeat region 5.97 5.247 n n n ruditapes_c13930 1.15 0.838 3.606 4.148 n n n ruditapes_c8163 -1.169 0.838 4.067 3.48 n n n ruditapes_c20471 -1.235 0.838 2.209 1.788 n n n ruditapes_c10804 -1.291 0.838 1.544 1.196 n n n ruditapes_c20826 1.349 0.838 fanconi complementation group e 0.77 1.039 n n n ruditapes_lrc32352 1.387 0.838 von willebrand factor c domain containing 2 0.643 0.891 n n n ruditapes_c14176 1.439 0.838 0.511 0.736 n n n ruditapes_c24653 -1.483 0.838 0.686 0.463 n n n ruditapes_lrc34050 -1.483 0.838 0.686 0.463 n n n ruditapes_c29631 1.649 0.838 0.257 0.424 n y n ruditapes_s37989 1.649 0.838 ribosomal protein s8 0.257 0.423 n y n ruditapes_lrc34601 -1.557 0.838 0.556 0.357 n y n ruditapes_c22944 -1.557 0.838 0.55 0.353 n y n ruditapes2_c1786 1.799 0.838 sarcoplasmic calcium-binding protein 0.179 0.322 n y n ruditapes2_c2034 -1.668 0.838 c-type superfamily member 14 isoform 2 isoform 2 0.426 0.255 n y n ruditapes_c25544 2.248 0.838 0.086 0.192 n y n ruditapes2_lrc4605 -1.853 0.838 calcium binding protein 1 0.311 0.168 n y n ruditapes_c16686 -1.853 0.838 0.311 0.168 n y n ruditapes_lrc33932 -2.224 0.838 0.204 0.092 n y n ruditapes_c13739 -2.224 0.838 0.203 0.091 n y n ruditapes2_c1566 ? 0.838 immunity-related gtpase cinema 1 0 0.042 n y n ruditapes2_c166 ? 0.838 0 0.042 n y n ruditapes2_c919 ? 0.838 0 0.042 n y n ruditapes2_lrc4375 ? 0.838 0 0.042 n y n ruditapes_c10480 ? 0.838 GE21491 [Drosophila yakuba] 0 0.042 n y n ruditapes_c16175 ? 0.838 mannose c type 2 0 0.042 n y n ruditapes_c17070 ? 0.838 0 0.042 n y n ruditapes_c18800 ? 0.838 0 0.042 n y n ruditapes_c20580 ? 0.838 0 0.042 n y n ruditapes_c21842 ? 0.838 0 0.042 n y n ruditapes_c25553 ? 0.838 0 0.042 n y n ruditapes_c26196 ? 0.838 0 0.042 n y n ruditapes_c6217 ? 0.838 beta 4 /// 0016043 // cellular component organization /// 0000166 // nucleotide binding /// 0042995 // cell projection /// 0005622 // intracellular /// 0007017 // microtubule-based process 0 0.042 n y n ruditapes_c7185 ? 0.838 0 0.042 n y n ruditapes_c9579 ? 0.838 0 0.042 n y n ruditapes_s34651 ? 0.838 0 0.042 n y n ruditapes2_c5777 -4.448 0.838 0.086 0.019 n y n ruditapes_c2669 -? 0.838 isoform a /// 0016787 // hydrolase activity 0.042 0 n y n ruditapes2_c3350 1.02 0.839 114.319 116.619 n n n ruditapes_c23771 -1.095 0.839 12.272 11.21 n n n ruditapes_c30399 -1.112 0.839 eukaryotic peptide chain release factor subunit "/// 0007224 // smoothened signaling pathway /// 0016149 // translation release factor activity, codon specific /// 0006605 // protein targeting /// 0006415 // translational termination /// 0005829 // cytosol /// 0018444 // translation release factor complex /// 0035071 // salivary gland cell autophagic cell death" 8.808 7.922 n n n ruditapes_c29563 -1.12 0.839 7.744 6.917 n n n ruditapes_c4830 -1.135 0.839 6.176 5.443 n n n ruditapes2_c616 -1.141 0.839 phosphoglycerate mutase "/// 0046538 // 2, 3-bisphosphoglycerate-dependent phosphoglycerate mutase activity /// 0006096 // glycolysis" 5.599 4.905 n n n ruditapes2_c2903 -1.165 0.839 4.214 3.618 n n n ruditapes_c23857 1.169 0.839 2.862 3.346 n n n ruditapes_c11052 -1.174 0.839 serine threonine-protein kinase pim-3 /// 0005524 // ATP binding /// 0043066 // negative regulation of apoptosis /// 0007275 // multicellular organismal development /// 0008283 // cell proliferation /// 0030145 // manganese ion binding /// 0006468 // protein amino acid phosphorylation /// 0005515 // protein binding /// 0004674 // protein serine/threonine kinase activity /// 0005737 // cytoplasm 3.802 3.239 n n n ruditapes2_c3002 1.178 0.839 hyou1 protein 2.62 3.086 n n n ruditapes_c22850 -1.193 0.839 3.131 2.624 n n n ruditapes_c19139 -1.23 0.839 2.292 1.863 n n n ruditapes_c12859 -1.294 0.839 churchill domain containing 1 "/// 0042661 // regulation of mesodermal cell fate specification /// 0006355 // regulation of transcription, DNA-dependent /// 0030334 // regulation of cell migration /// 0046872 // metal ion binding /// 0045941 // positive regulation of transcription /// 0042074 // cell migration involved in gastrulation" 1.499 1.158 n n n ruditapes_c10178 -1.318 0.839 1.308 0.993 n n n ruditapes2_c2479 1.399 0.839 0.597 0.835 n n n ruditapes_c12124 1.461 0.839 0.461 0.674 n n n ruditapes_s37380 1.649 0.839 60s ribosomal protein l27 /// 0006414 // translational elongation /// 0005840 // ribosome /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 0.255 0.42 n y n ruditapes_c22829 1.649 0.839 0.252 0.415 n y n ruditapes_lrc39179 1.799 0.839 transmembrane protein 14c 0.178 0.319 n y n ruditapes_c11609 1.799 0.839 mgc84609 protein 0.177 0.319 n y n ruditapes_lrc36662 1.949 0.839 bcl-2 protein /// 0051239 // regulation of multicellular organismal process /// 0051094 // positive regulation of developmental process /// 0014070 // response to organic cyclic substance /// 0010035 // response to inorganic substance /// 0006952 // defense response /// 0008283 // cell proliferation /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0006916 // anti-apoptosis /// 0042802 // identical protein binding /// 0010468 // regulation of gene expression /// 0048522 // positive regulation of cellular process /// 0031090 // organelle membrane /// 0051179 // localization /// 0044260 // cellular macromolecule metabolic process /// 0012505 // endomembrane system /// 0031967 // organelle envelope /// 0048468 // cell development /// 0007005 // mitochondrion organization /// 0051704 // multi-organism process /// 0022414 // reproductive process /// 0009628 // response to abiotic stimulus /// 0030003 // cellular cation homeostasis /// 0009653 // anatomical structure morphogenesis /// 0050790 // regulation of catalytic activity /// 0030097 // hemopoiesis /// 0006955 // immune response /// 0051881 // regulation of mitochondrial membrane potential /// 0042113 // B cell activation /// 0046983 // protein dimerization activity /// 0043393 // regulation of protein binding /// 0043279 // response to alkaloid /// 0032845 // negative regulation of homeostatic process 0.133 0.26 n y n ruditapes_c6075 2.248 0.839 0.085 0.192 n y n ruditapes_c20308 2.248 0.839 0.085 0.191 n y n ruditapes_c2742 -1.853 0.839 0.307 0.166 n y n ruditapes_c15902 2.698 0.839 0.052 0.141 n y n ruditapes_c16475 -2.224 0.839 0.201 0.09 n y n ruditapes_c24486 -2.224 0.839 0.2 0.09 n y n ruditapes_c723 ? 0.839 0 0.042 n y n ruditapes_c10228 ? 0.839 0 0.041 n y n ruditapes_c10364 ? 0.839 0 0.041 n y n ruditapes_c12954 ? 0.839 0 0.041 n y n ruditapes_c20931 ? 0.839 0 0.041 n y n ruditapes_c23690 ? 0.839 0 0.041 n y n ruditapes_c25055 ? 0.839 0 0.041 n y n ruditapes_c30662 ? 0.839 0 0.041 n y n ruditapes_c32028 ? 0.839 0 0.041 n y n ruditapes_c517 ? 0.839 0 0.041 n y n ruditapes_lrc36550 ? 0.839 angiopoietin-like 7 0 0.041 n y n ruditapes2_c85 -? 0.839 0.041 0 n y n ruditapes_lrc32341 -1.058 0.84 ribosomal protein l8 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome 34.126 32.259 n n n ruditapes2_c1609 -1.091 0.84 13.229 12.126 n n n ruditapes_c27188 1.085 0.84 n-acylsphingosine amidohydrolase isoform cra_a /// 0017040 // ceramidase activity /// 0010033 // response to organic substance /// 0005624 // membrane fraction /// 0008283 // cell proliferation /// 0005739 // mitochondrion /// 0005886 // plasma membrane 10.168 11.029 n n n ruditapes2_lrc3441 -1.103 0.84 atpase mitochondrial 10.312 9.352 n n n ruditapes2_lrc3936 -1.121 0.84 beta-like 2 /// 0005524 // ATP binding /// 0005515 // protein binding /// 0005865 // striated muscle thin filament 7.446 6.643 n n n ruditapes2_c270 -1.133 0.84 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0055114 // oxidation reduction /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0005506 // iron ion binding" 6.225 5.495 n n n ruditapes_c11563 -1.153 0.84 4.751 4.121 n n n ruditapes2_c1568 -1.16 0.84 4.366 3.763 n n n ruditapes_c38024 1.206 0.84 kallikrein plasma (fletcher factor) 1 /// 0005576 // extracellular region /// 0007596 // blood coagulation /// 0006508 // proteolysis /// 0004252 // serine-type endopeptidase activity 1.981 2.388 n n n ruditapes_c16006 -1.243 0.84 2.058 1.656 n n n ruditapes_c31666 -1.259 0.84 1.832 1.455 n n n ruditapes_c21781 1.299 0.84 0.995 1.292 n n n ruditapes_c6248 -1.308 0.84 alkaline phosphatase /// 0046872 // metal ion binding /// 0016787 // hydrolase activity 1.365 1.043 n n n ruditapes_c7690 -1.314 0.84 17-beta-hydroxysteroid dehydrogenase 14 /// 0004303 // estradiol 17-beta-dehydrogenase activity /// 0005488 // binding /// 0005829 // cytosol /// 0006706 // steroid catabolic process /// 0047045 // testosterone 17-beta-dehydrogenase (NADP+) activity 1.322 1.006 n n n ruditapes2_c1255 1.439 0.84 0.5 0.72 n n n ruditapes_c22318 -1.377 0.84 glutamic-oxaloacetic transaminase soluble (aspartate aminotransferase 1) /// 0030170 // pyridoxal phosphate binding /// 0009058 // biosynthetic process /// 0006520 // cellular amino acid metabolic process /// 0004069 // L-aspartate:2-oxoglutarate aminotransferase activity 0.983 0.714 n n n ruditapes_c9622 -1.4 0.84 0.893 0.638 n n n ruditapes_c23940 -1.483 0.84 0.67 0.452 n n n ruditapes_c28556 1.799 0.84 0.175 0.314 n y n ruditapes_c11634 2.024 0.84 0.116 0.235 n y n ruditapes_c7074 2.024 0.84 0.115 0.234 n y n ruditapes_c22808 -1.779 0.84 0.342 0.192 n y n ruditapes_s36140 -1.779 0.84 signal transduction protein with efhand domain 0.34 0.191 n y n ruditapes_c19346 -1.779 0.84 0.339 0.19 n y n ruditapes_c3716 2.248 0.84 ornithine decarboxylase antizyme 0.084 0.189 n y n ruditapes_c13993 2.248 0.84 0.084 0.188 n y n ruditapes_lrc36909 2.248 0.84 mitochondrial 28s ribosomal protein 0.084 0.188 n y n ruditapes_c8417 2.248 0.84 0.083 0.187 n y n ruditapes_c30037 -2.224 0.84 0.199 0.089 n y n ruditapes_s37780 -2.224 0.84 0.197 0.089 n y n ruditapes2_c2370 ? 0.84 0 0.041 n y n ruditapes2_lrc4351 ? 0.84 nadh dehydrogenase 1 beta subcomplex 3 /// 0005739 // mitochondrion /// 0016020 // membrane 0 0.041 n y n ruditapes2_lrc5431 ? 0.84 0 0.041 n y n ruditapes_c21727 ? 0.84 0 0.041 n y n ruditapes_c22395 ? 0.84 0 0.041 n y n ruditapes_c24987 ? 0.84 0 0.041 n y n ruditapes_c25367 ? 0.84 0 0.041 n y n ruditapes_lrc32466 ? 0.84 developmentally-regulated vdg3 0 0.041 n y n ruditapes_lrc34500 ? 0.84 activating transcription factor 4 /// 0006350 // transcription /// 0005515 // protein binding /// 0003677 // DNA binding /// 0030528 // transcription regulator activity /// 0044424 // intracellular part 0 0.041 n y n ruditapes_lrc35061 ? 0.84 cytochrome c oxidase subunit va 0 0.041 n y n ruditapes2_c2416 -? 0.84 scavenger receptor class member 2 0.041 0 n y n ruditapes_lrc17967 -? 0.84 0.041 0 n y n ruditapes_c16825 1.066 0.841 15.468 16.49 n n n ruditapes_c13609 1.071 0.841 13.748 14.724 n n n ruditapes2_c2535 1.089 0.841 9.089 9.899 n n n ruditapes_c3994 -1.102 0.841 10.307 9.354 n n n ruditapes_c11841 -1.118 0.841 7.733 6.914 n n n ruditapes_c19483 -1.158 0.841 4.418 3.815 n n n ruditapes_c30224 -1.179 0.841 iq motif containing k 3.495 2.964 n n n ruditapes2_c2280 -1.209 0.841 2.663 2.204 n n n ruditapes_lrc34177 -1.232 0.841 2.213 1.796 n n n ruditapes_c10191 1.308 0.841 0.927 1.213 n n n ruditapes_c37826 -1.334 0.841 1.177 0.882 n n n ruditapes_c5378 -1.39 0.841 0.92 0.662 n n n ruditapes2_c2735 -1.45 0.841 tpa_exp: rbj-like protein /// 0000166 // nucleotide binding 0.733 0.505 n n n ruditapes_c20121 1.574 0.841 0.307 0.483 n y n ruditapes_c30323 -1.483 0.841 0.661 0.446 n n n ruditapes_c14951 -1.483 0.841 0.656 0.442 n n n ruditapes_c21435 1.649 0.841 0.247 0.408 n y n ruditapes_c17082 -1.557 0.841 0.534 0.343 n y n ruditapes_c17701 -1.557 0.841 0.533 0.342 n y n ruditapes_c21119 1.799 0.841 phd finger protein 21a /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0000118 // histone deacetylase complex /// 0001967 // suckling behavior /// 0003682 // chromatin binding 0.172 0.309 n y n ruditapes_lrc34277 -1.668 0.841 nadh dehydrogenase 1 beta subcomplex 3 0.412 0.247 n y n ruditapes2_c45 2.248 0.841 0.082 0.185 n y n ruditapes_lrc36586 2.698 0.841 0.051 0.138 n y n ruditapes2_c581 -2.224 0.841 kazal-type serine protease inhibitor domain-containing protein 0.196 0.088 n y n ruditapes_c18904 -2.224 0.841 0.196 0.088 n y n ruditapes_s40201 -2.224 0.841 0.196 0.088 n y n ruditapes_lrc36380 -2.224 0.841 predicted protein [Nematostella vectensis] 0.195 0.088 n y n ruditapes_s38879 -2.224 0.841 0.195 0.088 n y n ruditapes2_c6161 ? 0.841 c-type lectin 1 0 0.04 n y n ruditapes2_lrc5892 ? 0.841 0 0.04 n y n ruditapes_c13611 ? 0.841 0 0.04 n y n ruditapes_c19691 ? 0.841 0 0.04 n y n ruditapes_c21402 ? 0.841 0 0.04 n y n ruditapes_c22224 ? 0.841 0 0.04 n y n ruditapes_c28352 ? 0.841 sialic acid acetylesterase 0 0.04 n y n ruditapes_c6698 ? 0.841 mago-nashi proliferation-associated /// 0008380 // RNA splicing /// 0005634 // nucleus /// 0006397 // mRNA processing /// 0051028 // mRNA transport /// 0003723 // RNA binding 0 0.04 n y n ruditapes_lrc34259 ? 0.841 unknown [Chrysomela tremulae] 0 0.04 n y n ruditapes_lrc34309 ? 0.841 megf10 protein 0 0.04 n y n ruditapes_lrc38340 ? 0.841 methyltransferase type 12 0 0.04 n y n ruditapes_lrc38790 ? 0.841 developmentally-regulated vdg3 0 0.04 n y n ruditapes_s37042 ? 0.841 0 0.04 n y n ruditapes_s38482 ? 0.841 0 0.04 n y n ruditapes_c19552 -? 0.841 0.04 0 n y n ruditapes_c20771 -? 0.841 0.04 0 n y n ruditapes_c14493 -1.066 0.842 25.176 23.617 n n n ruditapes_c13502 1.069 0.842 14.354 15.343 n n n ruditapes2_c2676 -1.083 0.842 15.415 14.231 n n n ruditapes_c21021 1.089 0.842 8.992 9.792 n n n ruditapes2_c2066 -1.112 0.842 8.554 7.694 n n n ruditapes2_lrc4191 -1.12 0.842 60s ribosomal protein l13 /// 0006414 // translational elongation /// 0051726 // regulation of cell cycle /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit 7.392 6.598 n n n ruditapes_c4377 1.154 0.842 3.31 3.82 n n n ruditapes2_c1862 1.156 0.842 mitochondrial ribosomal protein s16 /// 0005763 // mitochondrial small ribosomal subunit 3.19 3.689 n n n ruditapes_c20960 1.156 0.842 3.19 3.688 n n n ruditapes_c23892 -1.165 0.842 4.018 3.449 n n n ruditapes_c26394 1.19 0.842 2.225 2.649 n n n ruditapes_c28857 -1.223 0.842 2.318 1.895 n n n ruditapes_c28367 -1.257 0.842 1.82 1.448 n n n ruditapes2_c424 -1.264 0.842 xgadd45-gamma protein 1.724 1.365 n n n ruditapes_c23922 -1.28 0.842 1.557 1.216 n n n ruditapes_c1119 -1.308 0.842 glutaredoxin 2 1.322 1.011 n n n ruditapes_c27688 1.439 0.842 0.488 0.702 n n n ruditapes_c25019 -1.377 0.842 0.953 0.692 n n n ruditapes_c21465 -1.43 0.842 0.774 0.541 n n n ruditapes_c17498 -1.557 0.842 0.523 0.336 n y n ruditapes_c29361 -1.668 0.842 0.407 0.244 n y n ruditapes_lrc35167 -1.779 0.842 0.331 0.186 n y n ruditapes_c12182 2.248 0.842 cleavage and polyadenylation specificity factor cpsf /// 0005634 // nucleus /// 0003676 // nucleic acid binding 0.082 0.183 n y n ruditapes_s38821 2.248 0.842 protein 0.082 0.183 n y n ruditapes_c14642 -2.224 0.842 rhodanese domain protein 0.194 0.087 n y n ruditapes_c9239 -2.224 0.842 spi1_craviserine protease inhibitor cvsi-1 precursor 0.193 0.087 n y n ruditapes2_c4915 ? 0.842 0 0.04 n y n ruditapes2_c5391 ? 0.842 0 0.04 n y n ruditapes_c11892 ? 0.842 fibropellin ib 0 0.04 n y n ruditapes_c19134 ? 0.842 0 0.04 n y n ruditapes_c23677 ? 0.842 hydroxyacyl-coenzyme a dehydrogenase 3-ketoacyl-coenzyme a thiolase enoyl-coenzyme a hydratase (trifunctional protein) alpha subunit /// 0050662 // coenzyme binding /// 0003985 // acetyl-CoA C-acetyltransferase activity /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity /// 0006631 // fatty acid metabolic process /// 0042645 // mitochondrial nucleoid /// 0004300 // enoyl-CoA hydratase activity 0 0.04 n y n ruditapes_c25028 ? 0.842 mannose c type 2 0 0.04 n y n ruditapes_c6636 ? 0.842 0 0.04 n y n ruditapes_c7801 ? 0.842 0 0.04 n y n ruditapes_c9813 ? 0.842 0 0.04 n y n ruditapes_lrc33740 ? 0.842 0 0.04 n y n ruditapes_s39585 ? 0.842 0 0.04 n y n ruditapes_s40292 ? 0.842 0 0.04 n y n ruditapes_c16221 -? 0.842 8r-lipoxygenase-allene oxide synthase fusion protein /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0.04 0 n y n ruditapes_c27479 1.054 0.843 21.329 22.49 n n n ruditapes_c7309 -1.074 0.843 19.237 17.907 n n n ruditapes2_c321 -1.101 0.843 zinc mym domain containing 1 10.432 9.478 n n n ruditapes_c15051 1.138 0.843 3.973 4.521 n n n ruditapes_c28044 -1.175 0.843 3.539 3.01 n n n ruditapes_c29760 1.205 0.843 1.91 2.302 n n n ruditapes_c24994 1.221 0.843 1.67 2.038 n n n ruditapes_c16249 -1.23 0.843 quaking protein /// 0008380 // RNA splicing /// 0042692 // muscle cell differentiation /// 0005634 // nucleus /// 0001570 // vasculogenesis /// 0006397 // mRNA processing /// 0051028 // mRNA transport /// 0007283 // spermatogenesis /// 0042552 // myelination /// 0005737 // cytoplasm /// 0003723 // RNA binding /// 0042759 // long-chain fatty acid biosynthetic process /// 0017124 // SH3 domain binding /// 0006417 // regulation of translation 2.177 1.77 n n n ruditapes_c14941 -1.235 0.843 2.094 1.695 n n n ruditapes_c16726 -1.271 0.843 1.628 1.281 n n n ruditapes_c19769 -1.28 0.843 activating signal cointegrator 1 complex subunit 2 1.541 1.203 n n n ruditapes_c10868 -1.291 0.843 1.444 1.118 n n n ruditapes_c14340 -1.291 0.843 1.441 1.116 n n n ruditapes_c26553 1.349 0.843 0.72 0.971 n n n ruditapes_c18075 -1.322 0.843 1.21 0.915 n n n ruditapes_c12535 1.39 0.843 vitelline membrane outer layer protein 1 homolog precursor 0.592 0.824 n n n ruditapes_c27363 1.399 0.843 ga20785- partial 0.57 0.797 n n n ruditapes2_lrc3900 -1.39 0.843 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.896 0.645 n n n ruditapes_c27680 -1.39 0.843 0.896 0.645 n n n ruditapes_c27718 1.574 0.843 0.299 0.47 n y n ruditapes_lrc36511 -1.483 0.843 nadh dehydrogenase iron-sulfur protein 5 0.643 0.434 n n n ruditapes_c19674 -1.617 0.843 0.448 0.277 n y n ruditapes_c5849 -1.668 0.843 0.402 0.241 n y n ruditapes_c17760 2.248 0.843 0.08 0.181 n y n ruditapes_c12173 -1.946 0.843 0.257 0.132 n y n ruditapes_c20462 -2.224 0.843 0.191 0.086 n y n ruditapes2_c1242 ? 0.843 isoform g 0 0.039 n y n ruditapes2_c4004 ? 0.843 0 0.039 n y n ruditapes2_c5429 ? 0.843 c-type lectin /// 0044425 // membrane part /// 0050789 // regulation of biological process /// 0005515 // protein binding /// 0007154 // cell communication /// 0050896 // response to stimulus 0 0.039 n y n ruditapes_c1174 ? 0.843 loc398539 protein 0 0.039 n y n ruditapes_c12573 ? 0.843 0 0.039 n y n ruditapes_c12819 ? 0.843 0 0.039 n y n ruditapes_c16580 ? 0.843 0 0.039 n y n ruditapes_c19350 ? 0.843 0 0.039 n y n ruditapes_c19438 ? 0.843 scavenger receptor class member 2 0 0.039 n y n ruditapes_c19455 ? 0.843 protein 0 0.039 n y n ruditapes_c19791 ? 0.843 0 0.039 n y n ruditapes_c20529 ? 0.843 0 0.039 n y n ruditapes_c21850 ? 0.843 0 0.039 n y n ruditapes_c23087 ? 0.843 0 0.039 n y n ruditapes_c24918 ? 0.843 0 0.039 n y n ruditapes_c26335 ? 0.843 0 0.039 n y n ruditapes_c2697 ? 0.843 0 0.039 n y n ruditapes_c3860 ? 0.843 0 0.039 n y n ruditapes_c7639 ? 0.843 0 0.039 n y n ruditapes_c8614 ? 0.843 0 0.039 n y n ruditapes_c9573 ? 0.843 galactoside- 3 binding protein /// 0005634 // nucleus /// 0005515 // protein binding /// 0005615 // extracellular space /// 0005044 // scavenger receptor activity /// 0007165 // signal transduction /// 0006968 // cellular defense response 0 0.039 n y n ruditapes_lrc25673 ? 0.843 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0.039 n y n ruditapes_lrc32574 ? 0.843 vdg3 [Mytilus edulis] 0 0.039 n y n ruditapes_s36455 ? 0.843 0 0.039 n y n ruditapes_s38881 ? 0.843 friy_lymst ame: full=yolk ferritin flags: precursor 0 0.039 n y n ruditapes_s40370 ? 0.843 0 0.039 n y n ruditapes_c34994 1.038 0.844 von willebrand factor like partial 40.065 41.572 n n n ruditapes_c12582 -1.051 0.844 43.291 41.192 n n n ruditapes_c14246 -1.056 0.844 35.12 33.26 n n n ruditapes_c22990 1.073 0.844 12.553 13.47 n n n ruditapes_c16099 -1.155 0.844 4.39 3.799 n n n ruditapes_c14233 1.158 0.844 3.06 3.543 n n n ruditapes2_c291 1.175 0.844 2.533 2.975 n n n ruditapes_c38681 1.18 0.844 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 2.402 2.835 n n n ruditapes_c20877 1.186 0.844 2.262 2.682 n n n ruditapes_c31220 1.199 0.844 1.984 2.379 n n n ruditapes2_c1235 1.206 0.844 1.875 2.261 n n n ruditapes_c12578 1.249 0.844 1.33 1.661 n n n ruditapes_c21679 1.249 0.844 1.322 1.652 n n n ruditapes_lrc12999 1.285 0.844 ubiquinone biosynthesis protein coq7 /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0019538 // protein metabolic process /// 0016491 // oxidoreductase activity /// 0006744 // ubiquinone biosynthetic process /// 0005506 // iron ion binding 1.037 1.332 n n n ruditapes_c19668 -1.271 0.844 1.611 1.268 n n n ruditapes_c5859 -1.297 0.844 1.38 1.064 n n n ruditapes_c32026 -1.304 0.844 1.331 1.021 n n n ruditapes_c18494 1.424 0.844 acyl-coenzyme a dehydrogenase member 8 "/// 0006355 // regulation of transcription, DNA-dependent /// 0050660 // FAD binding /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0003995 // acyl-CoA dehydrogenase activity /// 0006629 // lipid metabolic process /// 0009083 // branched chain family amino acid catabolic process /// 0009055 // electron carrier activity" 0.505 0.719 n n n ruditapes_c22669 1.424 0.844 0.505 0.719 n n n ruditapes_c25184 -1.368 0.844 0.962 0.703 n n n ruditapes_c29470 -1.415 0.844 0.801 0.566 n n n ruditapes_c23202 -1.43 0.844 mitochondrial precursor /// 0005739 // mitochondrion /// 0009893 // positive regulation of metabolic process /// 0005789 // endoplasmic reticulum membrane /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0016021 // integral to membrane /// 0006506 // GPI anchor biosynthetic process /// 0000506 // glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex 0.76 0.532 n n n ruditapes2_c2907 -1.483 0.844 0.636 0.429 n n n ruditapes_c3493 -1.483 0.844 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 0.635 0.428 n n n ruditapes_lrc13858 -1.483 0.844 0.631 0.426 n n n ruditapes_c26139 1.649 0.844 hypothetical protein BRAFLDRAFT_85163 [Branchiostoma floridae] 0.237 0.39 n y n ruditapes_c16687 -1.557 0.844 0.512 0.329 n y n ruditapes_c5492 1.799 0.844 cytochrome c oxidase subunit ii 0.167 0.301 n y n ruditapes_c20633 -1.668 0.844 0.395 0.237 n y n ruditapes_s36653 -1.779 0.844 ependymin related protein-1 precursor 0.323 0.182 n y n ruditapes_c19883 2.248 0.844 0.079 0.179 n y n ruditapes_lrc12686 2.248 0.844 0.079 0.179 n y n ruditapes_c27990 2.248 0.844 0.079 0.178 n y n ruditapes_c26100 -2.224 0.844 0.188 0.084 n y n ruditapes_c28703 -2.224 0.844 0.187 0.084 n y n ruditapes2_c525 ? 0.844 0 0.039 n y n ruditapes2_c5261 ? 0.844 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity /// 0009792 // embryonic development ending in birth or egg hatching 0 0.039 n y n ruditapes2_c6456 ? 0.844 0 0.039 n y n ruditapes_c10462 ? 0.844 heat shock 70kda protein 12a 0 0.039 n y n ruditapes_c10774 ? 0.844 0 0.039 n y n ruditapes_c11122 ? 0.844 0 0.039 n y n ruditapes_c11140 ? 0.844 0 0.039 n y n ruditapes_c14318 ? 0.844 0 0.039 n y n ruditapes_c16166 ? 0.844 0 0.039 n y n ruditapes_c16852 ? 0.844 plac8-like 1 0 0.039 n y n ruditapes_c19173 ? 0.844 0 0.039 n y n ruditapes_c19529 ? 0.844 hypothetical protein [Monosiga brevicollis MX1] 0 0.039 n y n ruditapes_c20090 ? 0.844 0 0.039 n y n ruditapes_c20464 ? 0.844 0 0.039 n y n ruditapes_c23268 ? 0.844 0 0.039 n y n ruditapes_c30701 ? 0.844 0 0.039 n y n ruditapes_c38261 ? 0.844 transcription intermediary factor 1-related 0 0.039 n y n ruditapes_lrc13943 ? 0.844 0 0.039 n y n ruditapes_lrc19679 ? 0.844 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0.039 n y n ruditapes_lrc39082 ? 0.844 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0040010 // positive regulation of growth rate /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0 0.039 n y n ruditapes_s36469 ? 0.844 0 0.039 n y n ruditapes2_c2875 ? 0.844 type alpha 1 0 0.038 n y n ruditapes_c10752 ? 0.844 0 0.038 n y n ruditapes_c15345 ? 0.844 0 0.038 n y n ruditapes_c23244 ? 0.844 0 0.038 n y n ruditapes_c23546 ? 0.844 0 0.038 n y n ruditapes_c30282 ? 0.844 0 0.038 n y n ruditapes_lrc38190 ? 0.844 0 0.038 n y n ruditapes_s37970 ? 0.844 0 0.038 n y n ruditapes_c30288 -? 0.844 0.039 0 n y n ruditapes_c20585 -1.15 0.845 4.669 4.062 n n n ruditapes_c28616 1.148 0.845 3.421 3.927 n n n ruditapes2_c235 -1.156 0.845 elongation factor 1-alpha /// 0005811 // lipid particle /// 0003824 // catalytic activity 4.304 3.723 n n n ruditapes_c31360 -1.161 0.845 4.071 3.507 n n n ruditapes_c25486 -1.165 0.845 ankyrin unc44 3.888 3.338 n n n ruditapes_c18512 1.169 0.845 2.658 3.108 n n n ruditapes_c22667 -1.197 0.845 2.785 2.326 n n n ruditapes_c9228 -1.229 0.845 2.142 1.743 n n n ruditapes_c20243 -1.271 0.845 1.601 1.26 n n n ruditapes2_c5448 1.314 0.845 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0009055 // electron carrier activity" 0.852 1.12 n n n ruditapes_c8400 -1.435 0.845 14-3-3 protein beta alpha /// 0040010 // positive regulation of growth rate /// 0005515 // protein binding /// 0043053 // dauer entry /// 0018991 // oviposition 0.736 0.513 n n n ruditapes_c29382 -1.483 0.845 0.625 0.422 n n n ruditapes_c13868 -1.588 0.845 0.467 0.294 n y n ruditapes2_c1294 -1.701 0.845 0.365 0.215 n y n ruditapes_c6741 -1.73 0.845 inhibitor of apoptosis protein 1 0.346 0.2 n y n ruditapes_c20237 -1.779 0.845 0.318 0.179 n y n ruditapes2_c2600 -2.224 0.845 0.187 0.084 n y n ruditapes_c16833 -2.224 0.845 protein tyrosine receptor u /// 0004725 // protein tyrosine phosphatase activity /// 0006468 // protein amino acid phosphorylation /// 0016021 // integral to membrane /// 0008286 // insulin receptor signaling pathway /// 0004872 // receptor activity 0.186 0.084 n y n ruditapes_c22904 -2.224 0.845 0.185 0.083 n y n ruditapes_c8952 -2.224 0.845 0.185 0.083 n y n ruditapes_c12178 ? 0.845 0 0.038 n y n ruditapes_c19421 ? 0.845 0 0.038 n y n ruditapes_c20352 ? 0.845 unc-93 homolog a 0 0.038 n y n ruditapes_c20598 ? 0.845 0 0.038 n y n ruditapes_c20936 ? 0.845 0 0.038 n y n ruditapes_c21251 ? 0.845 0 0.038 n y n ruditapes_c22774 ? 0.845 0 0.038 n y n ruditapes_c23026 ? 0.845 0 0.038 n y n ruditapes_c23784 ? 0.845 0 0.038 n y n ruditapes_c28018 ? 0.845 0 0.038 n y n ruditapes_c29759 ? 0.845 0 0.038 n y n ruditapes_c32463 ? 0.845 0 0.038 n y n ruditapes_c37570 ? 0.845 0 0.038 n y n ruditapes_lrc21183 ? 0.845 developmentally-regulated vdg3 0 0.038 n y n ruditapes_lrc22951 ? 0.845 0 0.038 n y n ruditapes_lrc32873 ? 0.845 developmentally-regulated vdg3 0 0.038 n y n ruditapes_lrc35790 ? 0.845 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0 0.038 n y n ruditapes_lrc39001 ? 0.845 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0.038 n y n ruditapes_s35928 ? 0.845 0 0.038 n y n ruditapes_s38896 ? 0.845 chromosome 4 open reading frame 34 0 0.038 n y n ruditapes_s39546 ? 0.845 0 0.038 n y n ruditapes_c967 -? 0.845 0.038 0 n y n ruditapes_lrc15928 -? 0.845 0.038 0 n y n ruditapes_lrc26446 -1.086 0.846 13.733 12.647 n n n ruditapes_c23289 1.133 0.846 4.103 4.649 n n n ruditapes_c8869 1.16 0.846 2.914 3.381 n n n ruditapes_c8386 -1.163 0.846 3.922 3.371 n n n ruditapes_c29578 1.194 0.846 2.018 2.411 n n n ruditapes_c24847 1.206 0.846 1.822 2.198 n n n ruditapes_c96 1.209 0.846 sarcoplasmic calcium-binding protein /// 0005509 // calcium ion binding 1.791 2.164 n n n ruditapes2_c825 -1.224 0.846 2.183 1.783 n n n ruditapes_c13045 -1.308 0.846 1.268 0.969 n n n ruditapes_c4438 -1.318 0.846 1.201 0.911 n n n ruditapes_c30783 1.394 0.846 0.561 0.782 n n n ruditapes_c11430 -1.35 0.846 1.02 0.756 n n n ruditapes_c14724 1.424 0.846 isoform cra_a 0.491 0.699 n n n ruditapes2_c3183 1.499 0.846 inhibitor of apoptosis protein 0.366 0.549 n n n ruditapes_c27012 1.619 0.846 hypothetical protein BRAFLDRAFT_83226 [Branchiostoma floridae] 0.252 0.408 n y n ruditapes2_c2767 -1.557 0.846 0.496 0.319 n y n ruditapes2_lrc2221 -1.668 0.846 0.387 0.232 n y n ruditapes_c23617 -1.668 0.846 0.386 0.231 n y n ruditapes_c11130 2.024 0.846 0.107 0.216 n y n ruditapes_lrc20029 -1.779 0.846 0.316 0.177 n y n ruditapes2_c4606 2.248 0.846 transcription intermediary factor 1-related 0.077 0.174 n y n ruditapes_c22826 2.248 0.846 0.077 0.174 n y n ruditapes2_c528 -2.224 0.846 0.183 0.083 n y n ruditapes_c18190 -2.224 0.846 0.183 0.083 n y n ruditapes2_c1691 ? 0.846 myc homolog 0 0.038 n y n ruditapes_c12694 ? 0.846 0 0.038 n y n ruditapes_c13851 ? 0.846 flavin-containing monooxygenase /// 0003824 // catalytic activity 0 0.038 n y n ruditapes_c15252 ? 0.846 0 0.038 n y n ruditapes_c18528 ? 0.846 0 0.038 n y n ruditapes_c19284 ? 0.846 0 0.038 n y n ruditapes_c19420 ? 0.846 0 0.038 n y n ruditapes_c20326 ? 0.846 cg33099 cg33099-pa 0 0.038 n y n ruditapes_c20567 ? 0.846 0 0.038 n y n ruditapes_c21080 ? 0.846 0 0.038 n y n ruditapes_c21884 ? 0.846 0 0.038 n y n ruditapes_c22020 ? 0.846 0 0.038 n y n ruditapes_c22913 ? 0.846 c-type superfamily member 13 0 0.038 n y n ruditapes_c25052 ? 0.846 0 0.038 n y n ruditapes_c25275 ? 0.846 0 0.038 n y n ruditapes_c27156 ? 0.846 0 0.038 n y n ruditapes_c5154 ? 0.846 0 0.038 n y n ruditapes_c9702 ? 0.846 0 0.038 n y n ruditapes_lrc13743 ? 0.846 asialoglycoprotein receptor 1 0 0.038 n y n ruditapes_lrc32801 ? 0.846 dynein heavy chain 0 0.038 n y n ruditapes_lrc35214 ? 0.846 mantle gene 6 0 0.038 n y n ruditapes_lrc8560 ? 0.846 0 0.038 n y n ruditapes_s35622 ? 0.846 0 0.038 n y n ruditapes_s38410 ? 0.846 tempt_aplca ame: full=temptin flags: precursor 0 0.038 n y n ruditapes_s38976 ? 0.846 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity 0 0.038 n y n ruditapes_s39045 ? 0.846 signal transduction protein with efhand domain 0 0.038 n y n ruditapes_c12936 ? 0.846 0 0.037 n y n ruditapes_c20088 ? 0.846 0 0.037 n y n ruditapes_lrc35694 ? 0.846 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0 0.037 n y n ruditapes_lrc39068 ? 0.846 tempt_aplca ame: full=temptin flags: precursor 0 0.037 n y n ruditapes_s34583 ? 0.846 0 0.037 n y n ruditapes_s38664 ? 0.846 tempt_aplca ame: full=temptin flags: precursor 0 0.037 n y n ruditapes_s39668 ? 0.846 zgc:136279 protein 0 0.037 n y n ruditapes_c18645 -1.084 0.847 14.402 13.292 n n n ruditapes_c27384 1.107 0.847 myosin heavy chain /// 0005488 // binding 5.992 6.633 n n n ruditapes_c26699 -1.133 0.847 5.646 4.982 n n n ruditapes_lrc18603 -1.137 0.847 5.366 4.72 n n n ruditapes_c22512 1.176 0.847 coatomer protein subunit gamma "/// 0048205 // COPI coating of Golgi vesicle /// 0006890 // retrograde vesicle-mediated transport, Golgi to ER /// 0005515 // protein binding /// 0005829 // cytosol /// 0030126 // COPI vesicle coat" 2.414 2.839 n n n ruditapes_c21721 1.193 0.847 2.018 2.409 n n n ruditapes_c9068 1.243 0.847 1.331 1.654 n n n ruditapes2_c5678 -1.235 0.847 sialic acid binding lectin /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 1.981 1.603 n n n ruditapes2_c59 -1.271 0.847 1.547 1.217 n n n ruditapes_c18378 -1.271 0.847 1.546 1.216 n n n ruditapes_c23925 -1.271 0.847 1.544 1.215 n n n ruditapes_c25561 1.299 0.847 0.916 1.189 n n n ruditapes_c27725 -1.297 0.847 1.325 1.021 n n n ruditapes_c21645 -1.305 0.847 1.267 0.971 n n n ruditapes_c19385 1.349 0.847 0.685 0.924 n n n ruditapes_c10113 1.461 0.847 prune homolog 2 /// 0030145 // manganese ion binding /// 0016491 // oxidoreductase activity /// 0051318 // G1 phase /// 0006917 // induction of apoptosis /// 0005737 // cytoplasm 0.417 0.61 n n n ruditapes_c24457 -1.39 0.847 0.845 0.608 n n n ruditapes2_c1274 -1.445 0.847 0.684 0.473 n n n ruditapes2_c265 1.574 0.847 0.281 0.443 n y n ruditapes_c10892 -1.483 0.847 0.61 0.412 n n n ruditapes_c31102 1.649 0.847 0.228 0.376 n y n ruditapes_lrc11318 1.649 0.847 0.227 0.375 n y n ruditapes_lrc28015 1.799 0.847 0.161 0.289 n y n ruditapes_c31446 -1.668 0.847 0.384 0.23 n y n ruditapes_c2583 -1.73 0.847 nadh dehydrogenase 1 beta subcomplex subunit mitochondrial precursor 0.337 0.195 n y n ruditapes_c18295 2.248 0.847 0.076 0.171 n y n ruditapes2_c765 2.698 0.847 glutathione s-transferase pi 0.047 0.128 n y n ruditapes2_c1389 ? 0.847 0 0.037 n y n ruditapes_c11683 ? 0.847 0 0.037 n y n ruditapes_c11824 ? 0.847 0 0.037 n y n ruditapes_c12631 ? 0.847 0 0.037 n y n ruditapes_c12846 ? 0.847 0 0.037 n y n ruditapes_c12923 ? 0.847 0 0.037 n y n ruditapes_c14534 ? 0.847 0 0.037 n y n ruditapes_c14968 ? 0.847 0 0.037 n y n ruditapes_c16126 ? 0.847 0 0.037 n y n ruditapes_c17689 ? 0.847 multidrug efflux system protein 0 0.037 n y n ruditapes_c18380 ? 0.847 0 0.037 n y n ruditapes_c18423 ? 0.847 0 0.037 n y n ruditapes_c18869 ? 0.847 0 0.037 n y n ruditapes_c18943 ? 0.847 0 0.037 n y n ruditapes_c18965 ? 0.847 0 0.037 n y n ruditapes_c19044 ? 0.847 hypothetical protein BRAFLDRAFT_66166 [Branchiostoma floridae] 0 0.037 n y n ruditapes_c19576 ? 0.847 0 0.037 n y n ruditapes_c19795 ? 0.847 predicted protein [Nematostella vectensis] 0 0.037 n y n ruditapes_c20314 ? 0.847 0 0.037 n y n ruditapes_c21094 ? 0.847 0 0.037 n y n ruditapes_c21426 ? 0.847 0 0.037 n y n ruditapes_c22180 ? 0.847 0 0.037 n y n ruditapes_c22856 ? 0.847 0 0.037 n y n ruditapes_c22890 ? 0.847 sulfotransferase phenol- member 2 /// 0044237 // cellular metabolic process 0 0.037 n y n ruditapes_c24345 ? 0.847 0 0.037 n y n ruditapes_c2480 ? 0.847 0 0.037 n y n ruditapes_c27869 ? 0.847 0 0.037 n y n ruditapes_c32640 ? 0.847 0 0.037 n y n ruditapes_c35412 ? 0.847 0 0.037 n y n ruditapes_c4348 ? 0.847 0 0.037 n y n ruditapes_c7314 ? 0.847 0 0.037 n y n ruditapes_c9032 ? 0.847 0 0.037 n y n ruditapes_c9662 ? 0.847 snf1-like kinase 2 /// 0005524 // ATP binding /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004674 // protein serine/threonine kinase activity /// 0005737 // cytoplasm /// 0000287 // magnesium ion binding /// 0008286 // insulin receptor signaling pathway /// 0007243 // protein kinase cascade 0 0.037 n y n ruditapes_c9825 ? 0.847 0 0.037 n y n ruditapes_c9971 ? 0.847 caprin family member 2 0 0.037 n y n ruditapes_lrc21428 ? 0.847 0 0.037 n y n ruditapes_lrc33223 ? 0.847 0 0.037 n y n ruditapes_lrc34892 ? 0.847 0 0.037 n y n ruditapes_s37306 ? 0.847 0 0.037 n y n ruditapes_s38119 ? 0.847 0 0.037 n y n ruditapes_s39088 ? 0.847 0 0.037 n y n ruditapes_s39696 ? 0.847 glutathione s-transferase sigma 0 0.037 n y n ruditapes_s39882 ? 0.847 0 0.037 n y n ruditapes_s40181 ? 0.847 ef hand family protein 0 0.037 n y n ruditapes_c21889 -1.078 0.848 16.554 15.359 n n n ruditapes_c17587 1.069 0.848 13.178 14.088 n n n ruditapes_c15771 -1.091 0.848 11.809 10.819 n n n ruditapes_lrc9723 1.081 0.848 translationally controlled tumor protein 9.761 10.554 n n n ruditapes2_c3812 1.113 0.848 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 5.367 5.976 n n n ruditapes_lrc26656 -1.124 0.848 6.47 5.759 n n n ruditapes2_c3583 1.12 0.848 small nuclear ribonucleoprotein d2 /// 0000245 // spliceosome assembly /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0003676 // nucleic acid binding /// 0005829 // cytosol /// 0000387 // spliceosomal snRNP biogenesis 4.818 5.395 n n n ruditapes_c29961 1.124 0.848 4.512 5.072 n n n ruditapes2_c2478 -1.137 0.848 5.362 4.718 n n n ruditapes_c28756 1.142 0.848 3.518 4.019 n n n ruditapes_c28991 1.174 0.848 2.439 2.864 n n n ruditapes_c16997 -1.177 0.848 3.25 2.761 n n n ruditapes2_c941 1.21 0.848 1.725 2.086 n n n ruditapes_lrc12736 -1.206 0.848 2.484 2.06 n n n ruditapes2_c1642 -1.216 0.848 2.271 1.868 n n n ruditapes_c15527 -1.26 0.848 1.638 1.3 n n n ruditapes_c19434 1.28 0.848 1.015 1.3 n n n ruditapes_lrc33786 -1.271 0.848 ribosomal protein l38 /// 0044444 // cytoplasmic part 1.539 1.211 n n n ruditapes_lrc35960 1.405 0.848 0.516 0.725 n n n ruditapes_c25533 -1.483 0.848 0.604 0.407 n n n ruditapes_c27097 -1.483 0.848 0.599 0.404 n n n ruditapes_s39345 1.649 0.848 0.224 0.369 n y n ruditapes2_lrc4978 -1.54 0.848 f-type h+-transporting atpase subunit f /// 0005811 // lipid particle 0.507 0.329 n y n ruditapes_c17716 1.799 0.848 0.158 0.285 n y n ruditapes_s36624 1.799 0.848 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.158 0.285 n y n ruditapes_c26928 -1.588 0.848 0.449 0.283 n y n ruditapes_c10240 1.799 0.848 novel lectin c-type domain containing protein 0.157 0.283 n y n ruditapes_c25989 -1.588 0.848 0.448 0.282 n y n ruditapes_c4731 -1.779 0.848 0.306 0.172 n y n ruditapes_c26480 2.248 0.848 plasminogen /// 0008285 // negative regulation of cell proliferation /// 0051918 // negative regulation of fibrinolysis /// 0005615 // extracellular space /// 0016525 // negative regulation of angiogenesis /// 0043537 // negative regulation of blood vessel endothelial cell migration /// 0051919 // positive regulation of fibrinolysis /// 0006917 // induction of apoptosis /// 0034185 // apolipoprotein binding /// 0004252 // serine-type endopeptidase activity 0.075 0.17 n y n ruditapes_c6937 2.248 0.848 hypothetical protein SORBIDRAFT_10g029700 [Sorghum bicolor] 0.075 0.17 n y n ruditapes_c18164 2.248 0.848 arylsulfatase b isoform 5 0.075 0.169 n y n ruditapes_c15065 -2.224 0.848 0.178 0.08 n y n ruditapes_c6475 -2.224 0.848 0.178 0.08 n y n ruditapes2_c1960 ? 0.848 methionine sulfoxide reductase a /// 0016491 // oxidoreductase activity /// 0008152 // metabolic process 0 0.037 n y n ruditapes2_c2127 ? 0.848 0 0.037 n y n ruditapes2_c3299 ? 0.848 cysteine rich bmp regulator 2 (chordin like) 0 0.037 n y n ruditapes2_lrc5539 ? 0.848 bdef_tactr ame: full=big defensin flags: precursor /// 0050896 // response to stimulus 0 0.037 n y n ruditapes_c10048 ? 0.848 0 0.037 n y n ruditapes_c10051 ? 0.848 0 0.037 n y n ruditapes_c10079 ? 0.848 0 0.037 n y n ruditapes_c10333 ? 0.848 0 0.037 n y n ruditapes_c11078 ? 0.848 0 0.037 n y n ruditapes_c11495 ? 0.848 0 0.037 n y n ruditapes_c12402 ? 0.848 0 0.037 n y n ruditapes_c12487 ? 0.848 0 0.037 n y n ruditapes_c1249 ? 0.848 0 0.037 n y n ruditapes_c13167 ? 0.848 0 0.037 n y n ruditapes_c13299 ? 0.848 0 0.037 n y n ruditapes_c13489 ? 0.848 0 0.037 n y n ruditapes_c14183 ? 0.848 0 0.037 n y n ruditapes_c15934 ? 0.848 0 0.037 n y n ruditapes_c16675 ? 0.848 0 0.037 n y n ruditapes_c17600 ? 0.848 chromosome 17 open reading frame 27 /// 0000166 // nucleotide binding 0 0.037 n y n ruditapes_c18391 ? 0.848 0 0.037 n y n ruditapes_c18621 ? 0.848 0 0.037 n y n ruditapes_c18829 ? 0.848 0 0.037 n y n ruditapes_c18833 ? 0.848 0 0.037 n y n ruditapes_c18939 ? 0.848 0 0.037 n y n ruditapes_c19345 ? 0.848 protein 0 0.037 n y n ruditapes_c19479 ? 0.848 0 0.037 n y n ruditapes_c20720 ? 0.848 0 0.037 n y n ruditapes_c20832 ? 0.848 0 0.037 n y n ruditapes_c21883 ? 0.848 0 0.037 n y n ruditapes_c21894 ? 0.848 0 0.037 n y n ruditapes_c22316 ? 0.848 0 0.037 n y n ruditapes_c22468 ? 0.848 0 0.037 n y n ruditapes_c22471 ? 0.848 0 0.037 n y n ruditapes_c22547 ? 0.848 0 0.037 n y n ruditapes_c23046 ? 0.848 glutathione s-transferase /// 0016740 // transferase activity /// 0008152 // metabolic process 0 0.037 n y n ruditapes_c25667 ? 0.848 0 0.037 n y n ruditapes_c27180 ? 0.848 0 0.037 n y n ruditapes_c2909 ? 0.848 barrier-to-autointegration factor 0 0.037 n y n ruditapes_c30878 ? 0.848 myosin va 0 0.037 n y n ruditapes_c34422 ? 0.848 0 0.037 n y n ruditapes_c38075 ? 0.848 proteasome ( macropain) beta 1 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 0 0.037 n y n ruditapes_c4346 ? 0.848 0 0.037 n y n ruditapes_c4546 ? 0.848 0 0.037 n y n ruditapes_c4825 ? 0.848 0 0.037 n y n ruditapes_c6243 ? 0.848 0 0.037 n y n ruditapes_c7721 ? 0.848 0 0.037 n y n ruditapes_c8119 ? 0.848 0 0.037 n y n ruditapes_c812 ? 0.848 0 0.037 n y n ruditapes_lrc15095 ? 0.848 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 0 0.037 n y n ruditapes_lrc27548 ? 0.848 0 0.037 n y n ruditapes_lrc32940 ? 0.848 tempt_aplca ame: full=temptin flags: precursor 0 0.037 n y n ruditapes_lrc33646 ? 0.848 s-layer domain-containing protein 0 0.037 n y n ruditapes_lrc34512 ? 0.848 developmentally-regulated vdg3 0 0.037 n y n ruditapes_lrc35237 ? 0.848 glutathione s-transferase 0 0.037 n y n ruditapes_lrc36056 ? 0.848 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0008152 // metabolic process /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.037 n y n ruditapes_lrc36339 ? 0.848 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0.037 n y n ruditapes_lrc37830 ? 0.848 cytochrome c oxidase subunit va 0 0.037 n y n ruditapes_s34941 ? 0.848 0 0.037 n y n ruditapes_s36240 ? 0.848 0 0.037 n y n ruditapes_s37890 ? 0.848 tandem repeat galectin 0 0.037 n y n ruditapes_s37975 ? 0.848 0 0.037 n y n ruditapes_s38006 ? 0.848 hypothetical protein BRAFLDRAFT_231162 [Branchiostoma floridae] 0 0.037 n y n ruditapes_c10250 -1.071 0.849 19.367 18.075 n n n ruditapes2_lrc4495 1.069 0.849 cg5499-pa /// 0043229 // intracellular organelle 13.047 13.944 n n n ruditapes_c6461 -1.09 0.849 12.153 11.154 n n n ruditapes_c14468 1.078 0.849 10.269 11.075 n n n ruditapes_c3913 -1.101 0.849 serine protease inhibitor 2 9.588 8.711 n n n ruditapes2_c1270 -1.119 0.849 peripheral-type benzodiazepine receptor /// 0005739 // mitochondrion 6.843 6.113 n n n ruditapes_c23261 -1.155 0.849 4.123 3.568 n n n ruditapes_c7740 -1.17 0.849 cathepsin c 3.478 2.973 n n n ruditapes_c12407 -1.223 0.849 thiosulfate sulfurtransferase /// 0005856 // cytoskeleton /// 0016783 // sulfurtransferase activity /// 0044237 // cellular metabolic process /// 0005739 // mitochondrion /// 0005886 // plasma membrane 2.109 1.725 n n n ruditapes_c22635 1.296 0.849 0.898 1.164 n n n ruditapes_c10976 -1.279 0.849 1.441 1.127 n n n ruditapes_c27694 -1.302 0.849 1.259 0.967 n n n ruditapes2_c5626 -1.304 0.849 60s ribosomal protein l23a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0019843 // rRNA binding /// 0000166 // nucleotide binding /// 0003735 // structural constituent of ribosome 1.237 0.949 n n n ruditapes_c30838 -1.322 0.849 1.126 0.852 n n n ruditapes_c26826 -1.334 0.849 1.065 0.798 n n n ruditapes_c182 -1.35 0.849 musashi homolog 2 /// 0008266 // poly(U) RNA binding /// 0000166 // nucleotide binding /// 0005844 // polysome /// 0005737 // cytoplasm 0.983 0.728 n n n ruditapes_c1221 1.461 0.849 0.404 0.59 n n n ruditapes_c22027 1.461 0.849 0.404 0.59 n n n ruditapes_c31994 1.529 0.849 0.32 0.489 n y n ruditapes_c31948 -1.483 0.849 0.592 0.399 n n n ruditapes_c22357 1.649 0.849 0.223 0.367 n y n ruditapes_c17256 2.248 0.849 0.075 0.168 n y n ruditapes_c19201 2.248 0.849 0.074 0.167 n y n ruditapes_c20283 2.248 0.849 0.074 0.167 n y n ruditapes_lrc35514 -1.906 0.849 inhibitor of apoptosis protein 0.25 0.131 n y n ruditapes2_c5239 -2.224 0.849 methionine sulfoxide reductase b3 /// 0005739 // mitochondrion 0.177 0.08 n y n ruditapes2_lrc6304 -2.224 0.849 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0.177 0.08 n y n ruditapes_c7215 -2.224 0.849 carbohydrate family 1 0.177 0.08 n y n ruditapes_c7756 -2.224 0.849 0.177 0.079 n y n ruditapes_lrc28204 -2.224 0.849 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.177 0.079 n y n ruditapes_c810 -2.224 0.849 developmentally-regulated vdg3 0.176 0.079 n y n ruditapes_s40204 -2.224 0.849 ribosomal protein l21 0.175 0.079 n y n ruditapes2_c1353 ? 0.849 bafl_xenla ame: full=barrier-to-autointegration factor-like protein short=baf-l ame: full=barrier-to-autointegration factor 2 0 0.036 n y n ruditapes2_c2611 ? 0.849 0 0.036 n y n ruditapes2_c6325 ? 0.849 hemagglutinin amebocyte aggregation factor precursor 0 0.036 n y n ruditapes_c11546 ? 0.849 guanylate binding protein interferon- 67kda /// 0016020 // membrane /// 0019002 // GMP binding 0 0.036 n y n ruditapes_c12613 ? 0.849 0 0.036 n y n ruditapes_c14527 ? 0.849 0 0.036 n y n ruditapes_c15191 ? 0.849 0 0.036 n y n ruditapes_c17375 ? 0.849 asialoglycoprotein receptor 1 /// 0005488 // binding /// 0016020 // membrane 0 0.036 n y n ruditapes_c17711 ? 0.849 hypothetical protein BRAFLDRAFT_99630 [Branchiostoma floridae] 0 0.036 n y n ruditapes_c17915 ? 0.849 0 0.036 n y n ruditapes_c18141 ? 0.849 0 0.036 n y n ruditapes_c18172 ? 0.849 0 0.036 n y n ruditapes_c18175 ? 0.849 isoform b /// 0030154 // cell differentiation /// 0016020 // membrane /// 0007173 // epidermal growth factor receptor signaling pathway /// 0048513 // organ development 0 0.036 n y n ruditapes_c18361 ? 0.849 0 0.036 n y n ruditapes_c19441 ? 0.849 0 0.036 n y n ruditapes_c20248 ? 0.849 0 0.036 n y n ruditapes_c20391 ? 0.849 0 0.036 n y n ruditapes_c20454 ? 0.849 0 0.036 n y n ruditapes_c20865 ? 0.849 0 0.036 n y n ruditapes_c21097 ? 0.849 0 0.036 n y n ruditapes_c21210 ? 0.849 0 0.036 n y n ruditapes_c21809 ? 0.849 0 0.036 n y n ruditapes_c21916 ? 0.849 0 0.036 n y n ruditapes_c22014 ? 0.849 0 0.036 n y n ruditapes_c22127 ? 0.849 0 0.036 n y n ruditapes_c23000 ? 0.849 0 0.036 n y n ruditapes_c234 ? 0.849 cub and zona pellucida-like domains 1 /// 0031410 // cytoplasmic vesicle /// 0016020 // membrane /// 0009987 // cellular process 0 0.036 n y n ruditapes_c24799 ? 0.849 0 0.036 n y n ruditapes_c24962 ? 0.849 g protein-coupled receptor 180 /// 0016021 // integral to membrane 0 0.036 n y n ruditapes_c29768 ? 0.849 0 0.036 n y n ruditapes_c35897 ? 0.849 0 0.036 n y n ruditapes_c36556 ? 0.849 0 0.036 n y n ruditapes_c4928 ? 0.849 0 0.036 n y n ruditapes_c7526 ? 0.849 0 0.036 n y n ruditapes_c7811 ? 0.849 0 0.036 n y n ruditapes_c8988 ? 0.849 0 0.036 n y n ruditapes_c9043 ? 0.849 0 0.036 n y n ruditapes_lrc34498 ? 0.849 dopamine beta hydroxylase-like protein 0 0.036 n y n ruditapes_lrc36686 ? 0.849 elegans protein partially confirmed by transcript evidence /// 0005515 // protein binding 0 0.036 n y n ruditapes_lrc37565 ? 0.849 nucleoside diphosphate /// 0005524 // ATP binding /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0005880 // nuclear microtubule /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006228 // UTP biosynthetic process 0 0.036 n y n ruditapes_lrc37889 ? 0.849 0 0.036 n y n ruditapes_lrc38096 ? 0.849 0 0.036 n y n ruditapes_lrc38127 ? 0.849 tempt_aplca ame: full=temptin flags: precursor 0 0.036 n y n ruditapes_lrc38854 ? 0.849 0 0.036 n y n ruditapes_lrc38915 ? 0.849 0 0.036 n y n ruditapes_s36642 ? 0.849 protein 0 0.036 n y n ruditapes_s37049 ? 0.849 0 0.036 n y n ruditapes_s38856 ? 0.849 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation 0 0.036 n y n ruditapes_s39421 ? 0.849 methyltransferase type 11 0 0.036 n y n ruditapes_c970 -? 0.849 0.036 0 n y n ruditapes_c9427 1.033 0.85 44.939 46.436 n n n ruditapes_c15250 -1.099 0.85 9.798 8.915 n n n ruditapes_c28040 -1.121 0.85 6.63 5.917 n n n ruditapes_c4951 -1.131 0.85 5.597 4.948 n n n ruditapes_c29898 1.145 0.85 3.335 3.817 n n n ruditapes_c26301 1.149 0.85 3.124 3.59 n n n ruditapes2_c1836 -1.177 0.85 3.167 2.69 n n n ruditapes_c16174 1.199 0.85 1.847 2.215 n n n ruditapes_lrc19935 1.207 0.85 1.714 2.069 n n n ruditapes_c17493 -1.225 0.85 2.046 1.67 n n n ruditapes_c14810 1.285 0.85 0.955 1.227 n n n ruditapes2_c2952 1.304 0.85 apolipoprotein b 0.849 1.108 n n n ruditapes_c11525 -1.334 0.85 cyanophycinase 1.05 0.787 n n n ruditapes_c30439 -1.39 0.85 0.813 0.585 n n n ruditapes_s39779 -1.483 0.85 0.586 0.395 n n n ruditapes_c14019 1.799 0.85 0.154 0.277 n y n ruditapes_c8803 -1.588 0.85 0.435 0.274 n y n ruditapes_c9198 -1.668 0.85 0.366 0.22 n y n ruditapes2_lrc4883 -1.668 0.85 0.365 0.219 n y n ruditapes_c20499 -1.779 0.85 0.298 0.167 n y n ruditapes_c10563 -1.779 0.85 0.297 0.167 n y n ruditapes_c5107 -1.853 0.85 0.266 0.144 n y n ruditapes_c2670 2.698 0.85 0.045 0.122 n y n ruditapes_c12877 -2.224 0.85 0.174 0.078 n y n ruditapes_s36495 -2.224 0.85 0.174 0.078 n y n ruditapes_c18775 -2.224 0.85 0.173 0.078 n y n ruditapes_c19154 -2.224 0.85 0.173 0.078 n y n ruditapes_lrc30003 -2.224 0.85 0.173 0.078 n y n ruditapes2_c2608 ? 0.85 0 0.036 n y n ruditapes2_c3394 ? 0.85 cathepsin l /// 0016787 // hydrolase activity 0 0.036 n y n ruditapes_c10059 ? 0.85 0 0.036 n y n ruditapes_c10429 ? 0.85 methyltransferase type 12 0 0.036 n y n ruditapes_c10691 ? 0.85 0 0.036 n y n ruditapes_c12854 ? 0.85 0 0.036 n y n ruditapes_c13047 ? 0.85 galactose-specific c-type 0 0.036 n y n ruditapes_c14090 ? 0.85 0 0.036 n y n ruditapes_c14378 ? 0.85 0 0.036 n y n ruditapes_c14703 ? 0.85 0 0.036 n y n ruditapes_c17758 ? 0.85 zinc finger protein 385c 0 0.036 n y n ruditapes_c17889 ? 0.85 0 0.036 n y n ruditapes_c17987 ? 0.85 0 0.036 n y n ruditapes_c18843 ? 0.85 0 0.036 n y n ruditapes_c19412 ? 0.85 0 0.036 n y n ruditapes_c21808 ? 0.85 0 0.036 n y n ruditapes_c22119 ? 0.85 0 0.036 n y n ruditapes_c23410 ? 0.85 leucine rich repeat containing 6 /// 0060027 // convergent extension involved in gastrulation /// 0009953 // dorsal/ventral pattern formation /// 0007368 // determination of left/right symmetry /// 0005737 // cytoplasm 0 0.036 n y n ruditapes_c23816 ? 0.85 0 0.036 n y n ruditapes_c23850 ? 0.85 protein 0 0.036 n y n ruditapes_c23874 ? 0.85 0 0.036 n y n ruditapes_c24800 ? 0.85 0 0.036 n y n ruditapes_c24920 ? 0.85 0 0.036 n y n ruditapes_c25469 ? 0.85 0 0.036 n y n ruditapes_c25856 ? 0.85 0 0.036 n y n ruditapes_c26192 ? 0.85 0 0.036 n y n ruditapes_c27856 ? 0.85 0 0.036 n y n ruditapes_c27913 ? 0.85 protein 0 0.036 n y n ruditapes_c2850 ? 0.85 0 0.036 n y n ruditapes_c30663 ? 0.85 0 0.036 n y n ruditapes_c6766 ? 0.85 hypothetical protein TTHERM_00581890 [Tetrahymena thermophila] 0 0.036 n y n ruditapes_c7137 ? 0.85 neurotransmitter receptor protein 0 0.036 n y n ruditapes_c9436 ? 0.85 0 0.036 n y n ruditapes_c9499 ? 0.85 0 0.036 n y n ruditapes_lrc32471 ? 0.85 0 0.036 n y n ruditapes_lrc33370 ? 0.85 0 0.036 n y n ruditapes_lrc34319 ? 0.85 0 0.036 n y n ruditapes_lrc34968 ? 0.85 lysozyme /// 0042742 // defense response to bacterium /// 0003796 // lysozyme activity /// 0009792 // embryonic development ending in birth or egg hatching 0 0.036 n y n ruditapes_lrc36912 ? 0.85 glutathione s-transferase /// 0005515 // protein binding 0 0.036 n y n ruditapes_lrc38227 ? 0.85 tempt_aplca ame: full=temptin flags: precursor 0 0.036 n y n ruditapes_lrc39099 ? 0.85 inhibitor of apoptosis 0 0.036 n y n ruditapes_s35641 ? 0.85 galactoside- 3 0 0.036 n y n ruditapes_s36149 ? 0.85 0 0.036 n y n ruditapes_s36964 ? 0.85 0 0.036 n y n ruditapes_s37090 ? 0.85 hypothetical protein BRAFLDRAFT_231170 [Branchiostoma floridae] 0 0.036 n y n ruditapes_s37991 ? 0.85 0 0.036 n y n ruditapes_s38656 ? 0.85 0 0.036 n y n ruditapes_s39736 ? 0.85 glutathione s-transferase /// 0005515 // protein binding 0 0.036 n y n ruditapes_c3592 -? 0.85 gpi anchored 0.036 0 n y n ruditapes_c34449 1.044 0.851 ribosomal protein l24 /// 0010458 // exit from mitosis /// 0006414 // translational elongation /// 0021554 // optic nerve development /// 0005515 // protein binding /// 0031575 // G1/S transition checkpoint /// 0022625 // cytosolic large ribosomal subunit /// 0031290 // retinal ganglion cell axon guidance /// 0000027 // ribosomal large subunit assembly /// 0060041 // retina development in camera-type eye /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0009790 // embryonic development 27.898 29.12 n n n ruditapes2_c2640 -1.122 0.851 6.294 5.608 n n n ruditapes2_c1524 1.115 0.851 4.994 5.569 n n n ruditapes_s38575 1.137 0.851 3.612 4.108 n n n ruditapes2_c4484 1.147 0.851 kallikrein plasma (fletcher factor) 1 3.164 3.629 n n n ruditapes_lrc30591 1.156 0.851 2.826 3.268 n n n ruditapes2_c2737 1.163 0.851 2.625 3.054 n n n ruditapes_c8891 -1.176 0.851 3.167 2.693 n n n ruditapes2_c2410 -1.209 0.851 coiled-coil domain containing 93 2.3 1.901 n n n ruditapes2_lrc5424 -1.251 0.851 1.684 1.346 n n n ruditapes_c8842 1.289 0.851 0.915 1.179 n n n ruditapes_c22374 1.349 0.851 0.65 0.877 n n n ruditapes_c3791 -1.377 0.851 0.851 0.618 n n n ruditapes_c14197 -1.39 0.851 0.806 0.58 n n n ruditapes_c8439 -1.39 0.851 0.801 0.576 n n n ruditapes2_c731 -1.39 0.851 midline fasciclin 0.8 0.576 n n n ruditapes2_lrc6572 1.649 0.851 0.216 0.356 n y n ruditapes_c29384 -1.668 0.851 spry domain containing 3 0.362 0.217 n y n ruditapes_lrc35124 -1.668 0.851 kazal-type serine protease inhibitor domain-containing protein 0.362 0.217 n y n ruditapes_c15439 -1.668 0.851 0.36 0.216 n y n ruditapes_c14685 -2.224 0.851 0.172 0.078 n y n ruditapes_c25265 -2.224 0.851 0.171 0.077 n y n ruditapes2_c1678 ? 0.851 0 0.035 n y n ruditapes2_c1978 ? 0.851 0 0.035 n y n ruditapes2_c2614 ? 0.851 0 0.035 n y n ruditapes_c10160 ? 0.851 thrombospondin 1 /// 0044425 // membrane part /// 0032403 // protein complex binding /// 0010810 // regulation of cell-substrate adhesion /// 0006810 // transport /// 0031325 // positive regulation of cellular metabolic process /// 0007242 // intracellular signaling cascade /// 0001817 // regulation of cytokine production /// 0051093 // negative regulation of developmental process /// 0050921 // positive regulation of chemotaxis /// 0002578 // negative regulation of antigen processing and presentation /// 0016043 // cellular component organization /// 0051240 // positive regulation of multicellular organismal process /// 0045765 // regulation of angiogenesis /// 0043687 // post-translational protein modification /// 0002684 // positive regulation of immune system process /// 0019838 // growth factor binding /// 0050840 // extracellular matrix binding /// 0043535 // regulation of blood vessel endothelial cell migration /// 0006954 // inflammatory response /// 0030193 // regulation of blood coagulation /// 0016310 // phosphorylation /// 0032268 // regulation of cellular protein metabolic process /// 0009968 // negative regulation of signal transduction /// 0007167 // enzyme linked receptor protein signaling pathway /// 0044421 // extracellular region part /// 0010038 // response to metal ion /// 0051241 // negative regulation of multicellular organismal process /// 0030335 // positive regulation of cell migration 0 0.035 n y n ruditapes_c10418 ? 0.851 0 0.035 n y n ruditapes_c10431 ? 0.851 0 0.035 n y n ruditapes_c11460 ? 0.851 0 0.035 n y n ruditapes_c11763 ? 0.851 0 0.035 n y n ruditapes_c14198 ? 0.851 0 0.035 n y n ruditapes_c15892 ? 0.851 0 0.035 n y n ruditapes_c17040 ? 0.851 0 0.035 n y n ruditapes_c17476 ? 0.851 0 0.035 n y n ruditapes_c17834 ? 0.851 0 0.035 n y n ruditapes_c18240 ? 0.851 0 0.035 n y n ruditapes_c18837 ? 0.851 0 0.035 n y n ruditapes_c19052 ? 0.851 0 0.035 n y n ruditapes_c19621 ? 0.851 0 0.035 n y n ruditapes_c19963 ? 0.851 0 0.035 n y n ruditapes_c20069 ? 0.851 0 0.035 n y n ruditapes_c20696 ? 0.851 0 0.035 n y n ruditapes_c20970 ? 0.851 0 0.035 n y n ruditapes_c21072 ? 0.851 0 0.035 n y n ruditapes_c22506 ? 0.851 0 0.035 n y n ruditapes_c22936 ? 0.851 0 0.035 n y n ruditapes_c24709 ? 0.851 0 0.035 n y n ruditapes_c26184 ? 0.851 btb domain containing 3 0 0.035 n y n ruditapes_c28983 ? 0.851 0 0.035 n y n ruditapes_c30620 ? 0.851 0 0.035 n y n ruditapes_c30798 ? 0.851 hypothetical protein BRAFLDRAFT_121154 [Branchiostoma floridae] 0 0.035 n y n ruditapes_c4863 ? 0.851 0 0.035 n y n ruditapes_c4974 ? 0.851 0 0.035 n y n ruditapes_c7456 ? 0.851 0 0.035 n y n ruditapes_c8231 ? 0.851 0 0.035 n y n ruditapes_c9357 ? 0.851 0 0.035 n y n ruditapes_lrc13593 ? 0.851 0 0.035 n y n ruditapes_lrc33870 ? 0.851 0 0.035 n y n ruditapes_lrc38176 ? 0.851 protein /// 0003824 // catalytic activity 0 0.035 n y n ruditapes_lrc38963 ? 0.851 galectin 3 /// 0005488 // binding 0 0.035 n y n ruditapes_lrc6835 ? 0.851 0 0.035 n y n ruditapes_s32648 ? 0.851 "PREDICTED: hypothetical protein, partial [Strongylocentrotus purpuratus]" 0 0.035 n y n ruditapes_s34883 ? 0.851 0 0.035 n y n ruditapes_s35797 ? 0.851 0 0.035 n y n ruditapes_s37546 ? 0.851 0 0.035 n y n ruditapes_s39428 ? 0.851 thioredoxin domain containing 17 0 0.035 n y n ruditapes_s39836 ? 0.851 0 0.035 n y n ruditapes_s39923 ? 0.851 0 0.035 n y n ruditapes_s40103 ? 0.851 galactoside- 8 0 0.035 n y n ruditapes_s40146 ? 0.851 nadh: oxidoreductase subunit 0 0.035 n y n ruditapes_s40243 ? 0.851 glutathione s-transferase /// 0005515 // protein binding 0 0.035 n y n ruditapes_c9166 -? 0.851 0.035 0 n y n ruditapes_c2565 -1.075 0.852 16.857 15.682 n n n ruditapes2_c3993 1.093 0.852 proteasome maturation protein 7.274 7.949 n n n ruditapes_c13581 1.099 0.852 6.431 7.07 n n n ruditapes_c12025 1.101 0.852 6.248 6.879 n n n ruditapes2_c1889 1.132 0.852 succinate dehydrogenase cytochrome b560 mitochondrial precursor /// 0016020 // membrane 3.815 4.319 n n n ruditapes_c9802 -1.149 0.852 4.323 3.763 n n n ruditapes2_c2049 -1.166 0.852 3.464 2.971 n n n ruditapes_c14674 1.166 0.852 2.522 2.94 n n n ruditapes_c18959 1.187 0.852 2.018 2.396 n n n ruditapes_c29480 -1.194 0.852 2.64 2.211 n n n ruditapes_c3845 -1.201 0.852 2.454 2.043 n n n ruditapes_c9338 -1.255 0.852 1.596 1.271 n n n ruditapes_c16081 -1.271 0.852 endonuclease reverse transcriptase 1.453 1.143 n n n ruditapes_c7550 -1.304 0.852 sparc protein 1.192 0.914 n n n ruditapes2_lrc4680 -1.334 0.852 60s ribosomal protein l13a /// 0005840 // ribosome 1.011 0.758 n n n ruditapes_c23141 -1.557 0.852 0.46 0.295 n y n ruditapes_c9851 -1.588 0.852 0.424 0.267 n y n ruditapes_c18254 -2.224 0.852 0.17 0.076 n y n ruditapes2_c1225 -2.224 0.852 apolipophorin precursor 0.169 0.076 n y n ruditapes_lrc27945 -2.224 0.852 0.169 0.076 n y n ruditapes2_lrc5361 ? 0.852 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0.035 n y n ruditapes_c12440 ? 0.852 0 0.035 n y n ruditapes_c13234 ? 0.852 0 0.035 n y n ruditapes_c13267 ? 0.852 0 0.035 n y n ruditapes_c15685 ? 0.852 0 0.035 n y n ruditapes_c17530 ? 0.852 0 0.035 n y n ruditapes_c17672 ? 0.852 0 0.035 n y n ruditapes_c18033 ? 0.852 0 0.035 n y n ruditapes_c18350 ? 0.852 0 0.035 n y n ruditapes_c18448 ? 0.852 0 0.035 n y n ruditapes_c1902 ? 0.852 vitelline membrane outer layer protein 1 homolog precursor 0 0.035 n y n ruditapes_c19153 ? 0.852 0 0.035 n y n ruditapes_c19202 ? 0.852 sialic acid binding lectin 0 0.035 n y n ruditapes_c19240 ? 0.852 type alpha 2 0 0.035 n y n ruditapes_c19248 ? 0.852 0 0.035 n y n ruditapes_c20125 ? 0.852 0 0.035 n y n ruditapes_c20175 ? 0.852 0 0.035 n y n ruditapes_c20207 ? 0.852 0 0.035 n y n ruditapes_c20411 ? 0.852 0 0.035 n y n ruditapes_c20498 ? 0.852 0 0.035 n y n ruditapes_c20939 ? 0.852 0 0.035 n y n ruditapes_c22074 ? 0.852 0 0.035 n y n ruditapes_c22824 ? 0.852 0 0.035 n y n ruditapes_c24089 ? 0.852 0 0.035 n y n ruditapes_c25284 ? 0.852 0 0.035 n y n ruditapes_c26617 ? 0.852 0 0.035 n y n ruditapes_c2877 ? 0.852 antimicrobial peptide hydramacin 0 0.035 n y n ruditapes_c4902 ? 0.852 0 0.035 n y n ruditapes_c8165 ? 0.852 0 0.035 n y n ruditapes_lrc22045 ? 0.852 0 0.035 n y n ruditapes_lrc34579 ? 0.852 0 0.035 n y n ruditapes_lrc36262 ? 0.852 atp binding 0 0.035 n y n ruditapes_lrc36281 ? 0.852 leucine rich repeat containing 59 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle 0 0.035 n y n ruditapes_lrc37076 ? 0.852 galactoside- 3 /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 0 0.035 n y n ruditapes_lrc38359 ? 0.852 signal transduction protein with efhand domain 0 0.035 n y n ruditapes_lrc38883 ? 0.852 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0.035 n y n ruditapes_lrc39281 ? 0.852 unnamed protein product [Tetraodon nigroviridis] 0 0.035 n y n ruditapes_s36597 ? 0.852 glutathione s-transferase /// 0016740 // transferase activity 0 0.035 n y n ruditapes_s37041 ? 0.852 0 0.035 n y n ruditapes2_lrc4049 -? 0.852 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0.035 0 n y n ruditapes_c4851 -? 0.852 0.035 0 n y n ruditapes2_c468 1.004 0.853 60s ribosomal protein l37a /// 0006508 // proteolysis /// 0008237 // metallopeptidase activity /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0008270 // zinc ion binding /// 0003735 // structural constituent of ribosome /// 0046983 // protein dimerization activity 557.876 560.267 n n n ruditapes2_c4917 -1.044 0.853 small subunit ribosomal protein 25 /// 0005840 // ribosome 54.213 51.947 n n n ruditapes_c22125 1.068 0.853 12.555 13.408 n n n ruditapes_c27266 1.096 0.853 6.743 7.391 n n n ruditapes_c14514 1.159 0.853 2.702 3.131 n n n ruditapes_c4680 -1.181 0.853 2.915 2.467 n n n ruditapes_c12300 -1.195 0.853 2.561 2.144 n n n ruditapes_c8972 1.206 0.853 intracellular fatty acid binding protein /// 0005515 // protein binding 1.667 2.011 n n n ruditapes_c8593 -1.217 0.853 hypothetical protein BRAFLDRAFT_76887 [Branchiostoma floridae] 2.11 1.734 n n n ruditapes_c28271 -1.279 0.853 1.355 1.06 n n n ruditapes_c5536 -1.287 0.853 1.294 1.005 n n n ruditapes_c12454 -1.291 0.853 1.267 0.981 n n n ruditapes_c28963 -1.291 0.853 uncoordinated family member (unc-89) 1.257 0.974 n n n ruditapes_c13171 -1.308 0.853 1.141 0.873 n n n ruditapes_c28949 -1.483 0.853 0.56 0.378 n n n ruditapes_c29687 1.799 0.853 0.147 0.265 n y n ruditapes_c8449 -1.73 0.853 adapter molecule crk "/// 0046330 // positive regulation of JNK cascade /// 0007520 // myoblast fusion /// 0046529 // imaginal disc fusion, thorax closure /// 0005070 // SH3/SH2 adaptor activity" 0.311 0.18 n y n ruditapes_c9834 -1.779 0.853 0.286 0.161 n y n ruditapes_c21345 -2.224 0.853 0.168 0.075 n y n ruditapes_c19720 -2.224 0.853 0.167 0.075 n y n ruditapes_c13404 ? 0.853 0 0.035 n y n ruditapes_c31310 ? 0.853 0 0.035 n y n ruditapes2_c2214 ? 0.853 0 0.034 n y n ruditapes2_c2598 ? 0.853 0 0.034 n y n ruditapes2_lrc5021 ? 0.853 tempt_aplca ame: full=temptin flags: precursor 0 0.034 n y n ruditapes2_lrc5560 ? 0.853 signal transduction protein with efhand domain 0 0.034 n y n ruditapes2_lrc6441 ? 0.853 0 0.034 n y n ruditapes_c11710 ? 0.853 0 0.034 n y n ruditapes_c11783 ? 0.853 0 0.034 n y n ruditapes_c11876 ? 0.853 0 0.034 n y n ruditapes_c12006 ? 0.853 0 0.034 n y n ruditapes_c13224 ? 0.853 protein /// 0030154 // cell differentiation /// 0016020 // membrane /// 0005515 // protein binding /// 0001756 // somitogenesis /// 0050794 // regulation of cellular process /// 0048839 // inner ear development 0 0.034 n y n ruditapes_c13401 ? 0.853 hypothetical protein BRAFLDRAFT_84324 [Branchiostoma floridae] 0 0.034 n y n ruditapes_c13859 ? 0.853 0 0.034 n y n ruditapes_c13962 ? 0.853 0 0.034 n y n ruditapes_c14225 ? 0.853 0 0.034 n y n ruditapes_c14418 ? 0.853 0 0.034 n y n ruditapes_c17180 ? 0.853 0 0.034 n y n ruditapes_c17494 ? 0.853 0 0.034 n y n ruditapes_c17741 ? 0.853 0 0.034 n y n ruditapes_c1926 ? 0.853 0 0.034 n y n ruditapes_c22520 ? 0.853 0 0.034 n y n ruditapes_c22923 ? 0.853 0 0.034 n y n ruditapes_c25781 ? 0.853 PREDICTED: similar to transposase [Strongylocentrotus purpuratus] 0 0.034 n y n ruditapes_c27835 ? 0.853 0 0.034 n y n ruditapes_c4462 ? 0.853 col protein 0 0.034 n y n ruditapes_c5985 ? 0.853 0 0.034 n y n ruditapes_c7191 ? 0.853 0 0.034 n y n ruditapes_c7976 ? 0.853 0 0.034 n y n ruditapes_lrc30106 ? 0.853 asialoglycoprotein receptor 1 /// 0031668 // cellular response to extracellular stimulus /// 0042803 // protein homodimerization activity 0 0.034 n y n ruditapes_lrc30934 ? 0.853 0 0.034 n y n ruditapes_lrc34245 ? 0.853 0 0.034 n y n ruditapes_lrc34413 ? 0.853 0 0.034 n y n ruditapes_lrc36408 ? 0.853 flj45910 protein 0 0.034 n y n ruditapes_lrc9280 ? 0.853 0 0.034 n y n ruditapes_c20878 -1.071 0.854 18.38 17.166 n n n ruditapes2_c1089 1.059 0.854 15.901 16.845 n n n ruditapes2_c637 1.064 0.854 13.961 14.849 n n n ruditapes2_c2532 -1.09 0.854 11.095 10.175 n n n ruditapes2_c2105 1.098 0.854 6.45 7.083 n n n ruditapes2_c3945 1.113 0.854 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0009055 // electron carrier activity" 4.969 5.529 n n n ruditapes_c30713 -1.14 0.854 4.707 4.129 n n n ruditapes2_c406 1.148 0.854 collagen adhesin domain protein 2.999 3.444 n n n ruditapes2_lrc5005 -1.156 0.854 cathepsin a /// 0016787 // hydrolase activity 3.777 3.266 n n n ruditapes_c22287 -1.173 0.854 nfx1-type zinc finger-containing protein 1 3.152 2.687 n n n ruditapes2_c139 -1.173 0.854 3.132 2.671 n n n ruditapes_c13158 -1.184 0.854 novel protein containing lectin c-type domains 2.825 2.387 n n n ruditapes_c22431 1.187 0.854 1.969 2.337 n n n ruditapes_c2326 1.237 0.854 1.268 1.568 n n n ruditapes2_c2043 -1.247 0.854 1.669 1.339 n n n ruditapes_c25214 1.304 0.854 0.806 1.051 n n n ruditapes2_c1017 -1.283 0.854 1.301 1.014 n n n ruditapes_c27786 1.349 0.854 0.622 0.839 n n n ruditapes2_c3368 -1.377 0.854 0.815 0.592 n n n ruditapes_c27123 -1.4 0.854 0.738 0.527 n n n ruditapes_c24215 -1.415 0.854 0.703 0.497 n n n ruditapes_c8929 -1.445 0.854 dep domain containing 6 /// 0005622 // intracellular 0.626 0.433 n n n ruditapes_c5919 1.574 0.854 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 0.257 0.404 n y n ruditapes_c20754 1.649 0.854 0.208 0.343 n y n ruditapes_lrc33986 -1.557 0.854 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.451 0.29 n y n ruditapes_c29617 1.799 0.854 0.145 0.261 n y n ruditapes_c8007 -1.853 0.854 novel protein 0.252 0.136 n y n ruditapes_c14901 -1.853 0.854 rna sigma-24 ecf subfamily 0.25 0.135 n y n ruditapes2_lrc5376 2.698 0.854 transgelin 2 0.043 0.116 n y n ruditapes_lrc36057 -2.224 0.854 f-type h+-transporting atpase subunit f 0.165 0.074 n y n ruditapes_c18912 -2.224 0.854 0.164 0.074 n y n ruditapes_c3599 -2.224 0.854 0.164 0.074 n y n ruditapes_c4900 -2.224 0.854 0.164 0.074 n y n ruditapes_c5643 -2.224 0.854 cathepsin k /// 0008234 // cysteine-type peptidase activity /// 0005515 // protein binding 0.164 0.074 n y n ruditapes2_c276 ? 0.854 0 0.034 n y n ruditapes2_c3124 ? 0.854 0 0.034 n y n ruditapes2_lrc6642 ? 0.854 tandem repeat galectin 0 0.034 n y n ruditapes_c10122 ? 0.854 0 0.034 n y n ruditapes_c10158 ? 0.854 0 0.034 n y n ruditapes_c13164 ? 0.854 0 0.034 n y n ruditapes_c13256 ? 0.854 0 0.034 n y n ruditapes_c14387 ? 0.854 0 0.034 n y n ruditapes_c14700 ? 0.854 0 0.034 n y n ruditapes_c17127 ? 0.854 0 0.034 n y n ruditapes_c17136 ? 0.854 0 0.034 n y n ruditapes_c17301 ? 0.854 0 0.034 n y n ruditapes_c17793 ? 0.854 0 0.034 n y n ruditapes_c18329 ? 0.854 0 0.034 n y n ruditapes_c19080 ? 0.854 fibropellin ia /// 0005509 // calcium ion binding 0 0.034 n y n ruditapes_c20297 ? 0.854 0 0.034 n y n ruditapes_c23228 ? 0.854 0 0.034 n y n ruditapes_c24085 ? 0.854 0 0.034 n y n ruditapes_c37957 ? 0.854 0 0.034 n y n ruditapes_c7839 ? 0.854 0 0.034 n y n ruditapes_c8966 ? 0.854 0 0.034 n y n ruditapes_lrc36789 ? 0.854 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0.034 n y n ruditapes_c9332 -1.123 0.855 5.968 5.316 n n n ruditapes_c27481 1.121 0.855 4.288 4.807 n n n ruditapes_c16922 1.134 0.855 3.53 4.005 n n n ruditapes_lrc12531 1.159 0.855 2.624 3.041 n n n ruditapes_c38690 1.174 0.855 2.211 2.595 n n n ruditapes_c30230 1.199 0.855 1.73 2.075 n n n ruditapes2_c2182 1.214 0.855 1.516 1.84 n n n ruditapes_c12129 -1.209 0.855 2.194 1.815 n n n ruditapes_c22854 -1.213 0.855 cg3603-pa 2.111 1.74 n n n ruditapes_c23199 1.237 0.855 1.251 1.546 n n n ruditapes2_c752 1.249 0.855 tp53 regulated inhibitor of apoptosis 1 "/// 0043027 // caspase inhibitor activity /// 0005739 // mitochondrion /// 0006916 // anti-apoptosis /// 0006977 // DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest /// 0005515 // protein binding" 1.135 1.418 n n n ruditapes2_lrc5972 1.308 0.855 predicted protein [Nematostella vectensis] 0.777 1.016 n n n ruditapes2_lrc3910 -1.32 0.855 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0051082 // unfolded protein binding /// 0006457 // protein folding 1.051 0.796 n n n ruditapes_c30489 -1.334 0.855 0.981 0.735 n n n ruditapes_c27103 -1.334 0.855 0.97 0.727 n n n ruditapes_c13926 -1.359 0.855 0.864 0.636 n n n ruditapes_c29485 1.424 0.855 phosphoenolpyruvate carboxykinase /// 0003824 // catalytic activity 0.436 0.621 n n n ruditapes_lrc38270 -1.377 0.855 alpha actin "/// 0005524 // ATP binding /// 0042643 // actomyosin, actin part /// 0016887 // ATPase activity /// 0014829 // vascular smooth muscle contraction /// 0030240 // muscle thin filament assembly /// 0031674 // I band /// 0030048 // actin filament-based movement /// 0006915 // apoptosis /// 0060047 // heart contraction /// 0008217 // regulation of blood pressure /// 0017022 // myosin binding /// 0055003 // cardiac myofibril assembly /// 0055008 // cardiac muscle tissue morphogenesis" 0.807 0.586 n n n ruditapes_c8601 1.478 0.855 0.351 0.518 n n n ruditapes2_c5567 1.574 0.855 phosphonoacetaldehyde hydrolase 0.254 0.4 n y n ruditapes_lrc36717 1.686 0.855 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 0.185 0.312 n y n ruditapes2_c7075 -1.668 0.855 0.343 0.206 n y n ruditapes_c8649 -1.668 0.855 0.343 0.206 n y n ruditapes_c11877 -1.668 0.855 0.34 0.204 n y n ruditapes_c7518 -1.779 0.855 caprin family member 2 /// 0005737 // cytoplasm /// 0040008 // regulation of growth 0.277 0.156 n y n ruditapes_c25029 2.248 0.855 0.069 0.154 n y n ruditapes_c24700 2.248 0.855 0.068 0.154 n y n ruditapes_c22112 -1.853 0.855 0.249 0.134 n y n ruditapes_c12509 -2.224 0.855 0.163 0.073 n y n ruditapes_c5026 -2.224 0.855 0.163 0.073 n y n ruditapes_lrc16241 -2.224 0.855 0.163 0.073 n y n ruditapes_lrc34940 -2.224 0.855 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.163 0.073 n y n ruditapes_c30697 -2.224 0.855 0.162 0.073 n y n ruditapes_c9582 -2.224 0.855 0.162 0.073 n y n ruditapes_c17198 ? 0.855 0 0.034 n y n ruditapes_c20631 ? 0.855 0 0.034 n y n ruditapes_c21801 ? 0.855 0 0.034 n y n ruditapes_c7015 ? 0.855 0 0.034 n y n ruditapes_lrc36658 ? 0.855 heat shock protein 90 /// 0005524 // ATP binding /// 0006950 // response to stress /// 0030018 // Z disc /// 0030241 // muscle thick filament assembly /// 0051082 // unfolded protein binding /// 0006457 // protein folding /// 0048769 // sarcomerogenesis 0 0.034 n y n ruditapes2_c1092 ? 0.855 peptidoglycan-recognition protein precursor 0 0.033 n y n ruditapes_c10978 ? 0.855 0 0.033 n y n ruditapes_c17284 ? 0.855 0 0.033 n y n ruditapes_c17378 ? 0.855 0 0.033 n y n ruditapes_c17500 ? 0.855 0 0.033 n y n ruditapes_c17580 ? 0.855 0 0.033 n y n ruditapes_c17767 ? 0.855 ubiquitin-protein ligase 0 0.033 n y n ruditapes_c18012 ? 0.855 0 0.033 n y n ruditapes_c18043 ? 0.855 0 0.033 n y n ruditapes_c18731 ? 0.855 0 0.033 n y n ruditapes_c19433 ? 0.855 0 0.033 n y n ruditapes_c20416 ? 0.855 0 0.033 n y n ruditapes_c20898 ? 0.855 0 0.033 n y n ruditapes_c21391 ? 0.855 0 0.033 n y n ruditapes_c23525 ? 0.855 0 0.033 n y n ruditapes_c4100 ? 0.855 0 0.033 n y n ruditapes_c4446 ? 0.855 0 0.033 n y n ruditapes_c547 ? 0.855 antimicrobial peptide hydramacin 0 0.033 n y n ruditapes_c6404 ? 0.855 0 0.033 n y n ruditapes_c9112 ? 0.855 0 0.033 n y n ruditapes_lrc16002 ? 0.855 0 0.033 n y n ruditapes_lrc31032 ? 0.855 0 0.033 n y n ruditapes_lrc37110 ? 0.855 0 0.033 n y n ruditapes_lrc6839 ? 0.855 0 0.033 n y n ruditapes_s34222 ? 0.855 retinoblastoma binding protein 9 /// 0044424 // intracellular part 0 0.033 n y n ruditapes_s40328 ? 0.855 glutathione s-transferase 0 0.033 n y n ruditapes2_c4286 -1.034 0.856 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 97.351 94.188 n n n ruditapes_c21201 1.049 0.856 21.493 22.552 n n n ruditapes_c30481 1.075 0.856 10.291 11.058 n n n ruditapes_c26904 -1.102 0.856 8.505 7.72 n n n ruditapes2_lrc3503 -1.142 0.856 lethal neo18 /// 0016020 // membrane 4.443 3.891 n n n ruditapes_c21412 -1.165 0.856 3.348 2.874 n n n ruditapes_lrc23051 -1.17 0.856 3.135 2.678 n n n ruditapes_c15104 1.169 0.856 2.283 2.669 n n n ruditapes_c21700 -1.177 0.856 2.931 2.49 n n n ruditapes_c20872 -1.194 0.856 2.488 2.083 n n n ruditapes_c24892 1.274 0.856 0.943 1.202 n n n ruditapes_c4757 1.329 0.856 placenta-specific 8 0.677 0.9 n n n ruditapes_c28717 -1.359 0.856 0.856 0.63 n n n ruditapes_c23979 -1.359 0.856 0.852 0.627 n n n ruditapes2_c1316 1.439 0.856 0.401 0.577 n n n ruditapes_c10767 1.499 0.856 0.321 0.482 n n n ruditapes_c12905 1.686 0.856 0.184 0.311 n y n ruditapes_c29948 1.799 0.856 0.142 0.255 n y n ruditapes_c23386 -1.588 0.856 hypothetical protein BRAFLDRAFT_128458 [Branchiostoma floridae] 0.404 0.254 n y n ruditapes2_c3893 -1.668 0.856 alpha 3 type vi collagen isoform 1 precursor /// 0005578 // proteinaceous extracellular matrix 0.339 0.203 n y n ruditapes_c14345 -1.779 0.856 0.273 0.153 n y n ruditapes_c10992 -2.224 0.856 0.161 0.072 n y n ruditapes_c19785 -2.224 0.856 0.161 0.072 n y n ruditapes_s34788 -2.224 0.856 kazal-like serine protease inhibitor epi10 0.161 0.072 n y n ruditapes_c13478 -2.224 0.856 0.16 0.072 n y n ruditapes_c14720 -2.224 0.856 0.16 0.072 n y n ruditapes_c16570 -2.224 0.856 0.16 0.072 n y n ruditapes_c9961 -2.224 0.856 0.16 0.072 n y n ruditapes2_c1162 ? 0.856 0 0.033 n y n ruditapes2_c3009 ? 0.856 0 0.033 n y n ruditapes2_lrc5002 ? 0.856 0 0.033 n y n ruditapes_c11974 ? 0.856 0 0.033 n y n ruditapes_c16956 ? 0.856 0 0.033 n y n ruditapes_c17376 ? 0.856 0 0.033 n y n ruditapes_c20385 ? 0.856 0 0.033 n y n ruditapes_c21315 ? 0.856 0 0.033 n y n ruditapes_c2736 ? 0.856 0 0.033 n y n ruditapes_c27857 ? 0.856 0 0.033 n y n ruditapes_c29042 ? 0.856 0 0.033 n y n ruditapes_c2988 ? 0.856 0 0.033 n y n ruditapes_c5939 ? 0.856 dynein light chain cytoplasmic /// 0005875 // microtubule associated complex /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 0 0.033 n y n ruditapes_lrc32484 ? 0.856 c-type lectin domain family 4 member e 0 0.033 n y n ruditapes_lrc34185 ? 0.856 DEC-3 [Lymnaea stagnalis] 0 0.033 n y n ruditapes_lrc36212 ? 0.856 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0.033 n y n ruditapes_lrc38925 ? 0.856 0 0.033 n y n ruditapes_c8523 -? 0.856 laccase 1 /// 0046914 // transition metal ion binding /// 0016491 // oxidoreductase activity 0.033 0 n y n ruditapes2_c3252 1.035 0.857 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog /// 0005515 // protein binding 37.228 38.54 n n n ruditapes_c36371 -1.057 0.857 27.646 26.146 n n n ruditapes_c2951 1.104 0.857 5.549 6.127 n n n ruditapes_c37990 1.105 0.857 cathepsin l 5.397 5.964 n n n ruditapes_c24234 1.12 0.857 4.29 4.804 n n n ruditapes_lrc16405 1.134 0.857 3.52 3.99 n n n ruditapes_c18027 -1.14 0.857 4.451 3.903 n n n ruditapes_c19530 -1.149 0.857 ubiquitin-activating enzyme e1 /// 0005488 // binding 4.041 3.519 n n n ruditapes_c9909 1.173 0.857 2.167 2.542 n n n ruditapes_c19752 1.217 0.857 1.423 1.732 n n n ruditapes_c26565 1.237 0.857 1.225 1.515 n n n ruditapes_c25541 -1.227 0.857 1.843 1.502 n n n ruditapes_c25048 1.247 0.857 1.134 1.414 n n n ruditapes_c12804 1.267 0.857 0.974 1.235 n n n ruditapes_c18778 1.274 0.857 0.928 1.182 n n n ruditapes_c23773 -1.297 0.857 1.157 0.892 n n n ruditapes_c30241 -1.334 0.857 0.951 0.713 n n n ruditapes_c29008 1.574 0.857 protein disulfide isomerase family member 4 /// 0043229 // intracellular organelle 0.245 0.386 n y n ruditapes_c21283 -1.483 0.857 0.53 0.358 n n n ruditapes_c11414 1.799 0.857 arylsulfatase b /// 0003824 // catalytic activity 0.139 0.251 n y n ruditapes_lrc38487 -1.588 0.857 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.397 0.25 n y n ruditapes_lrc33447 -1.668 0.857 0.33 0.198 n y n ruditapes2_c3111 2.248 0.857 galactoside- soluble isoform cra_a 0.067 0.15 n y n ruditapes2_c1748 -2.224 0.857 0.158 0.071 n y n ruditapes_c10283 -2.224 0.857 0.158 0.071 n y n ruditapes_c14295 -2.224 0.857 0.158 0.071 n y n ruditapes_c25378 -2.224 0.857 0.158 0.071 n y n ruditapes_s38008 -2.224 0.857 0.158 0.071 n y n ruditapes_c17170 -2.224 0.857 0.157 0.071 n y n ruditapes_c18507 -2.224 0.857 0.157 0.071 n y n ruditapes_c27622 -2.224 0.857 0.157 0.071 n y n ruditapes_s36816 -2.224 0.857 kazal-like serine protease inhibitor epi10 0.157 0.071 n y n ruditapes_s38163 -2.224 0.857 0.157 0.071 n y n ruditapes_c13105 ? 0.857 0 0.033 n y n ruditapes_c15504 ? 0.857 tetraspanin-9 (tspan-9) (tetraspan net-5) 0 0.033 n y n ruditapes_c20690 ? 0.857 0 0.033 n y n ruditapes_c6016 ? 0.857 0 0.033 n y n ruditapes_lrc33259 ? 0.857 retinoblastoma binding protein 9 0 0.033 n y n ruditapes_c12612 ? 0.857 0 0.032 n y n ruditapes_c12792 ? 0.857 0 0.032 n y n ruditapes_c13561 ? 0.857 0 0.032 n y n ruditapes_c14585 ? 0.857 0 0.032 n y n ruditapes_c20938 ? 0.857 0 0.032 n y n ruditapes_c26702 ? 0.857 0 0.032 n y n ruditapes_c27894 ? 0.857 0 0.032 n y n ruditapes_lrc33676 ? 0.857 0 0.032 n y n ruditapes_lrc10500 -? 0.857 0.032 0 n y n ruditapes2_c23 1.047 0.858 22.286 23.341 n n n ruditapes_c2555 -1.083 0.858 12.533 11.572 n n n ruditapes_c15362 1.104 0.858 5.514 6.087 n n n ruditapes_c30729 -1.125 0.858 5.472 4.863 n n n ruditapes_c16471 -1.132 0.858 4.927 4.351 n n n ruditapes_lrc21414 1.138 0.858 3.23 3.676 n n n ruditapes_c21075 1.171 0.858 2.189 2.563 n n n ruditapes_c16665 -1.195 0.858 member ras oncogene family /// 0007264 // small GTPase mediated signal transduction /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0006897 // endocytosis /// 0005764 // lysosome /// 0004767 // sphingomyelin phosphodiesterase activity /// 0042470 // melanosome /// 0005770 // late endosome 2.376 1.988 n n n ruditapes_c14931 1.27 0.858 0.949 1.205 n n n ruditapes_c15648 -1.26 0.858 1.439 1.142 n n n ruditapes_c14710 -1.415 0.858 0.663 0.468 n n n ruditapes_c10297 -1.483 0.858 0.524 0.353 n n n ruditapes_lrc38878 1.799 0.858 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.138 0.248 n y n ruditapes_c30722 -1.779 0.858 0.268 0.151 n y n ruditapes_c17694 -2.224 0.858 0.156 0.07 n y n ruditapes_c8984 -2.224 0.858 0.155 0.07 n y n ruditapes_lrc10473 -2.224 0.858 0.155 0.07 n y n ruditapes2_c1765 ? 0.858 0 0.032 n y n ruditapes2_c6436 ? 0.858 0 0.032 n y n ruditapes_c14416 ? 0.858 0 0.032 n y n ruditapes_c16432 ? 0.858 0 0.032 n y n ruditapes_c17011 ? 0.858 0 0.032 n y n ruditapes_c17791 ? 0.858 0 0.032 n y n ruditapes_c21148 ? 0.858 0 0.032 n y n ruditapes_c22241 ? 0.858 0 0.032 n y n ruditapes_c24360 ? 0.858 0 0.032 n y n ruditapes_c2543 ? 0.858 0 0.032 n y n ruditapes_c26257 ? 0.858 fc fragment of low affinity receptor for 0 0.032 n y n ruditapes_c26292 ? 0.858 0 0.032 n y n ruditapes_c30855 ? 0.858 scavenger receptor class member 1 0 0.032 n y n ruditapes_c5277 ? 0.858 0 0.032 n y n ruditapes_c5588 ? 0.858 0 0.032 n y n ruditapes_c7962 ? 0.858 0 0.032 n y n ruditapes_lrc33500 ? 0.858 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0 0.032 n y n ruditapes_lrc35428 ? 0.858 0 0.032 n y n ruditapes_lrc35953 ? 0.858 0 0.032 n y n ruditapes2_c3546 1.027 0.859 55.335 56.838 n n n ruditapes_c28555 1.072 0.859 10.525 11.281 n n n ruditapes2_c2625 -1.14 0.859 4.395 3.856 n n n ruditapes_c20332 1.135 0.859 heterochromatin protein 1 beta /// 0005721 // centromeric heterochromatin /// 0005720 // nuclear heterochromatin /// 0001940 // male pronucleus /// 0042802 // identical protein binding /// 0005819 // spindle /// 0005654 // nucleoplasm /// 0010369 // chromocenter /// 0001939 // female pronucleus /// 0006333 // chromatin assembly or disassembly /// 0003682 // chromatin binding 3.313 3.762 n n n ruditapes_c28973 1.136 0.859 3.268 3.712 n n n ruditapes_c14667 1.145 0.859 2.94 3.365 n n n ruditapes_c27124 1.149 0.859 2.756 3.167 n n n ruditapes_c29109 1.15 0.859 2.73 3.141 n n n ruditapes_c11254 -1.177 0.859 2.818 2.393 n n n ruditapes_c7257 -1.209 0.859 polymerase ii (dna directed) polypeptide "/// 0046872 // metal ion binding /// 0005654 // nucleoplasm /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0016779 // nucleotidyltransferase activity /// 0000398 // nuclear mRNA splicing, via spliceosome" 2.071 1.713 n n n ruditapes_c20972 -1.229 0.859 1.766 1.437 n n n ruditapes_c29285 -1.241 0.859 acyl- dehydrogenase /// 0050660 // FAD binding /// 0003995 // acyl-CoA dehydrogenase activity /// 0008152 // metabolic process /// 0009055 // electron carrier activity 1.601 1.29 n n n ruditapes_c5933 -1.245 0.859 1.552 1.246 n n n ruditapes_s36606 -1.271 0.859 ribosomal protein s17 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.311 1.032 n n n ruditapes2_c2725 1.349 0.859 perlucin-like protein isoform b 0.58 0.782 n n n ruditapes_c29971 1.399 0.859 0.46 0.644 n n n ruditapes_c11168 1.413 0.859 0.427 0.603 n n n ruditapes2_c391 1.449 0.859 glutathione s-transferase pi /// 0004364 // glutathione transferase activity /// 0005515 // protein binding /// 0008152 // metabolic process /// 0032502 // developmental process 0.369 0.534 n n n ruditapes_c26454 1.574 0.859 0.241 0.38 n y n ruditapes_c7880 -1.853 0.859 0.233 0.126 n y n ruditapes_c13558 -2.224 0.859 0.154 0.069 n y n ruditapes_c17539 -2.224 0.859 0.154 0.069 n y n ruditapes_c16848 -2.224 0.859 0.153 0.069 n y n ruditapes2_lrc5000 ? 0.859 DEC-3 [Lymnaea stagnalis] 0 0.032 n y n ruditapes_c10657 ? 0.859 titin (rhabdomyosarcoma antigen mu-rms- ) 0 0.032 n y n ruditapes_c15613 ? 0.859 0 0.032 n y n ruditapes_c16110 ? 0.859 0 0.032 n y n ruditapes_c2287 ? 0.859 0 0.032 n y n ruditapes_c2296 ? 0.859 0 0.032 n y n ruditapes_c6065 ? 0.859 0 0.032 n y n ruditapes_c8237 ? 0.859 protein 0 0.032 n y n ruditapes_c9733 ? 0.859 apextrin 0 0.032 n y n ruditapes_lrc33411 ? 0.859 glutathione s-transferase /// 0005515 // protein binding 0 0.032 n y n ruditapes_c25881 ? 0.859 0 0.031 n y n ruditapes_lrc37613 ? 0.859 calmodulin /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 0 0.031 n y n ruditapes2_c499 1.071 0.86 10.561 11.309 n n n ruditapes_c23780 -1.152 0.86 3.681 3.195 n n n ruditapes_c10824 -1.166 0.86 3.133 2.687 n n n ruditapes_c9583 -1.191 0.86 stromal interaction molecule 1 /// 0006810 // transport 2.419 2.032 n n n ruditapes_c13113 1.217 0.86 1.364 1.66 n n n ruditapes_c5982 -1.221 0.86 1.848 1.514 n n n ruditapes_c25823 -1.229 0.86 1.736 1.412 n n n ruditapes2_c2690 -1.235 0.86 member ras oncogene family /// 0044444 // cytoplasmic part 1.659 1.343 n n n ruditapes_c20426 -1.243 0.86 1.574 1.266 n n n ruditapes_c33446 -1.26 0.86 thyroid hormone receptor interactor 3 /// 0005488 // binding 1.396 1.108 n n n ruditapes_c16109 -1.271 0.86 1.3 1.023 n n n ruditapes_lrc38708 1.299 0.86 actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 0.759 0.985 n n n ruditapes_c9946 1.349 0.86 0.571 0.771 n n n ruditapes_c26624 1.499 0.86 0.3 0.45 n n n ruditapes_c7410 -1.43 0.86 0.611 0.427 n n n ruditapes_lrc35469 -1.588 0.86 serine proteases and ovochymase regions /// 0003824 // catalytic activity 0.38 0.239 n y n ruditapes_lrc34716 1.799 0.86 0.133 0.239 n y n ruditapes_c27139 -1.588 0.86 0.378 0.238 n y n ruditapes_c26150 -1.779 0.86 0.259 0.146 n y n ruditapes_c28845 2.248 0.86 0.064 0.144 n y n ruditapes_c11603 -2.224 0.86 0.152 0.068 n y n ruditapes_lrc34266 -2.224 0.86 cytochrome c oxidase subunit va 0.152 0.068 n y n ruditapes_c15024 -2.224 0.86 0.151 0.068 n y n ruditapes2_c6641 ? 0.86 28s ribosomal protein 0 0.031 n y n ruditapes_c18315 ? 0.86 acetyl-coenzyme a carboxylase alpha 0 0.031 n y n ruditapes_c24915 ? 0.86 0 0.031 n y n ruditapes_c653 ? 0.86 antimicrobial peptide hydramacin 0 0.031 n y n ruditapes_c7190 ? 0.86 helentron 4 helitron-like transposon replicase helicase endonuclease 0 0.031 n y n ruditapes_c9807 ? 0.86 0 0.031 n y n ruditapes_lrc32631 ? 0.86 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0.031 n y n ruditapes_lrc32917 ? 0.86 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0 0.031 n y n ruditapes_lrc34812 ? 0.86 PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] 0 0.031 n y n ruditapes_lrc36374 ? 0.86 0 0.031 n y n ruditapes_lrc38106 ? 0.86 retinoblastoma binding protein 9 0 0.031 n y n ruditapes2_c1715 -1.078 0.861 mitochondrial ribosomal protein s5 /// 0005739 // mitochondrion 13.769 12.776 n n n ruditapes_c15956 -1.082 0.861 12.314 11.38 n n n ruditapes_c10294 1.075 0.861 9.474 10.183 n n n ruditapes_c9983 1.114 0.861 4.367 4.866 n n n ruditapes2_c2914 1.117 0.861 naaladase ii protein /// 0008233 // peptidase activity /// 0044464 // cell part 4.251 4.747 n n n ruditapes_c26667 -1.127 0.861 5.117 4.538 n n n ruditapes_c15853 1.131 0.861 3.422 3.87 n n n ruditapes_c7822 1.142 0.861 2.938 3.356 n n n ruditapes_c24848 -1.155 0.861 3.494 3.025 n n n ruditapes_c11848 1.166 0.861 2.208 2.574 n n n ruditapes_c21038 1.169 0.861 2.126 2.486 n n n ruditapes_c21398 1.172 0.861 2.073 2.43 n n n ruditapes_c14927 -1.175 0.861 2.777 2.362 n n n ruditapes_c28561 1.205 0.861 tnf receptor-associated factor 6 /// 0042981 // regulation of apoptosis /// 0001503 // ossification /// 0050870 // positive regulation of T cell activation /// 0005624 // membrane fraction /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0019886 // antigen processing and presentation of exogenous peptide antigen via MHC class II /// 0042088 // T-helper 1 type immune response /// 0001843 // neural tube closure /// 0005515 // protein binding /// 0007250 // activation of NF-kappaB-inducing kinase activity /// 0051023 // regulation of immunoglobulin secretion /// 0042475 // odontogenesis of dentine-containing tooth /// 0048661 // positive regulation of smooth muscle cell proliferation /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0045410 // positive regulation of interleukin-6 biosynthetic process /// 0048468 // cell development /// 0032743 // positive regulation of interleukin-2 production /// 0008270 // zinc ion binding /// 0007254 // JNK cascade /// 0043011 // myeloid dendritic cell differentiation /// 0050852 // T cell receptor signaling pathway /// 0045084 // positive regulation of interleukin-12 biosynthetic process /// 0000209 // protein polyubiquitination /// 0004842 // ubiquitin-protein ligase activity /// 0002726 // positive regulation of T cell cytokine production /// 0019221 // cytokine-mediated signaling pathway /// 0004872 // receptor activity 1.502 1.809 n n n ruditapes_c22729 -1.206 0.861 2.062 1.71 n n n ruditapes_c416 -1.219 0.861 1.837 1.506 n n n ruditapes_c14026 1.229 0.861 1.221 1.501 n n n ruditapes_c12526 -1.223 0.861 1.788 1.462 n n n ruditapes2_c2752 -1.271 0.861 twist neighbor 1.28 1.007 n n n ruditapes_c30188 -1.283 0.861 1.184 0.923 n n n ruditapes2_lrc3589 -1.368 0.861 0.759 0.555 n n n ruditapes_c21791 -1.38 0.861 0.727 0.527 n n n ruditapes_c20786 -1.415 0.861 0.629 0.444 n n n ruditapes_lrc34598 -1.483 0.861 sialic acid binding lectin 0.505 0.34 n n n ruditapes_lrc38851 2.248 0.861 wsc domain 0.063 0.143 n y n ruditapes_c15803 2.248 0.861 0.063 0.142 n y n ruditapes2_c3279 -2.224 0.861 0.149 0.067 n y n ruditapes_c23232 -2.224 0.861 0.148 0.067 n y n ruditapes2_c1832 ? 0.861 0 0.031 n y n ruditapes_c13209 ? 0.861 0 0.031 n y n ruditapes_c16586 ? 0.861 0 0.031 n y n ruditapes_c21835 ? 0.861 0 0.031 n y n ruditapes_c24508 ? 0.861 0 0.031 n y n ruditapes_c25396 ? 0.861 0 0.031 n y n ruditapes_c25433 ? 0.861 0 0.031 n y n ruditapes_c28543 ? 0.861 0 0.031 n y n ruditapes_c28705 ? 0.861 cytochrome p450 /// 0004497 // monooxygenase activity /// 0005506 // iron ion binding 0 0.031 n y n ruditapes_c3025 ? 0.861 0 0.031 n y n ruditapes_c5869 ? 0.861 eukaryotic translation initiation factor 4e /// 0000340 // RNA 7-methylguanosine cap binding /// 0006413 // translational initiation /// 0005515 // protein binding /// 0003743 // translation initiation factor activity /// 0005737 // cytoplasm 0 0.031 n y n ruditapes_lrc23599 ? 0.861 0 0.031 n y n ruditapes_lrc25295 ? 0.861 0 0.031 n y n ruditapes_lrc38437 ? 0.861 0 0.031 n y n ruditapes_lrc7496 ? 0.861 0 0.031 n y n ruditapes_s32765 ? 0.861 0 0.031 n y n ruditapes_c5220 ? 0.861 0 0.03 n y n ruditapes_c14184 1.081 0.862 8.171 8.83 n n n ruditapes2_c115 1.087 0.862 7.117 7.737 n n n ruditapes2_c461 -1.126 0.862 26s protease regulatory subunit s10b /// 0019538 // protein metabolic process /// 0043234 // protein complex /// 0000166 // nucleotide binding /// 0005737 // cytoplasm /// 0008233 // peptidase activity 5.151 4.574 n n n ruditapes_c10671 1.129 0.862 3.468 3.914 n n n ruditapes_c14494 -1.229 0.862 1.681 1.368 n n n ruditapes2_c2834 1.245 0.862 actin depolymerizing factor 3 /// 0043231 // intracellular membrane-bounded organelle /// 0005737 // cytoplasm 1.063 1.324 n n n ruditapes_c27662 1.245 0.862 1.063 1.324 n n n ruditapes_c9725 -1.254 0.862 tctex1 domain containing 2 1.404 1.119 n n n ruditapes_c8411 1.394 0.862 phytanoyl- dioxygenase family protein 0.445 0.621 n n n ruditapes_c29252 -1.588 0.862 0.369 0.232 n y n ruditapes_c12907 -2.224 0.862 0.146 0.066 n y n ruditapes_c17308 -2.224 0.862 0.146 0.066 n y n ruditapes_c8021 -2.224 0.862 0.146 0.066 n y n ruditapes2_c6312 ? 0.862 0 0.03 n y n ruditapes_c10772 ? 0.862 0 0.03 n y n ruditapes_c16324 ? 0.862 0 0.03 n y n ruditapes_c18787 ? 0.862 0 0.03 n y n ruditapes_c26248 ? 0.862 0 0.03 n y n ruditapes_c29408 ? 0.862 0 0.03 n y n ruditapes_c3062 ? 0.862 0 0.03 n y n ruditapes_lrc32432 ? 0.862 ribosomal protein l21 /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0.03 n y n ruditapes2_c4 -4.448 0.862 complement component q subcomponent-like 2 0.062 0.014 n y n ruditapes_c17175 1.067 0.863 11.3 12.054 n n n ruditapes_c9094 1.07 0.863 10.269 10.99 n n n ruditapes_c1150 1.076 0.863 9.067 9.752 n n n ruditapes_c15521 -1.095 0.863 8.925 8.153 n n n ruditapes2_c326 -1.096 0.863 8.663 7.902 n n n ruditapes_c6537 -1.119 0.863 5.7 5.095 n n n ruditapes_s33186 1.112 0.863 beta-ig-h3 fasciclin 4.439 4.935 n n n ruditapes_c25244 -1.12 0.863 5.525 4.933 n n n ruditapes2_c3005 -1.146 0.863 3.813 3.328 n n n ruditapes_c26845 -1.173 0.863 2.794 2.383 n n n ruditapes_c31320 -1.184 0.863 2.491 2.105 n n n ruditapes_c14137 1.184 0.863 1.773 2.099 n n n ruditapes2_c563 1.213 0.863 fungal metazoan origin like protein variant 2 /// 0016021 // integral to membrane 1.356 1.645 n n n ruditapes_c22571 -1.243 0.863 1.496 1.204 n n n ruditapes_c1857 -1.248 0.863 1.434 1.148 n n n ruditapes_c6489 -1.251 0.863 1.411 1.128 n n n ruditapes_c20113 -1.283 0.863 1.151 0.897 n n n ruditapes_c30833 1.312 0.863 0.677 0.888 n n n ruditapes_lrc38110 1.349 0.863 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0006950 // response to stress /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0016020 // membrane /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.551 0.743 n n n ruditapes2_lrc6449 1.461 0.863 mitochondrial atp synthase lipid binding protein precursor /// 0044425 // membrane part /// 0006810 // transport 0.335 0.489 n n n ruditapes_c13334 -1.39 0.863 0.676 0.487 n n n ruditapes_c6094 1.461 0.863 0.333 0.487 n n n ruditapes_c31016 -1.483 0.863 loc553453 protein /// 0005634 // nucleus 0.489 0.33 n n n ruditapes_c22265 -1.668 0.863 0.305 0.183 n y n ruditapes_c9292 2.248 0.863 membrane metallo-endopeptidase /// 0006508 // proteolysis /// 0005515 // protein binding /// 0007267 // cell-cell signaling /// 0008233 // peptidase activity /// 0005887 // integral to plasma membrane 0.061 0.137 n y n ruditapes_c29605 -1.853 0.863 0.221 0.119 n y n ruditapes_c10956 -2.224 0.863 0.145 0.065 n y n ruditapes_c9349 -2.224 0.863 0.144 0.065 n y n ruditapes_c13373 ? 0.863 zygote arrest 1 0 0.03 n y n ruditapes_c23480 ? 0.863 0 0.03 n y n ruditapes_c24649 ? 0.863 0 0.03 n y n ruditapes_c25907 ? 0.863 0 0.03 n y n ruditapes_c26247 ? 0.863 0 0.03 n y n ruditapes_c9214 ? 0.863 0 0.03 n y n ruditapes_lrc34957 ? 0.863 signal transduction protein with efhand domain 0 0.03 n y n ruditapes_lrc36352 ? 0.863 0 0.03 n y n ruditapes_s37734 ? 0.863 0 0.03 n y n ruditapes_c11963 1.064 0.864 12.1 12.875 n n n ruditapes_c4015 1.075 0.864 9.2 9.886 n n n ruditapes2_c2180 1.088 0.864 6.861 7.463 n n n ruditapes_c22839 1.092 0.864 6.207 6.779 n n n ruditapes_c15604 1.093 0.864 6.11 6.679 n n n ruditapes2_c1854 1.103 0.864 5.061 5.583 n n n ruditapes_c27309 1.113 0.864 4.273 4.756 n n n ruditapes2_c2588 -1.152 0.864 3.478 3.019 n n n ruditapes_c7017 -1.161 0.864 coracle protein /// 0005488 // binding /// 0044464 // cell part 3.115 2.683 n n n ruditapes_c26649 1.169 0.864 2.045 2.391 n n n ruditapes_c4338 -1.189 0.864 2.313 1.946 n n n ruditapes_c16578 1.199 0.864 1.518 1.82 n n n ruditapes2_lrc5484 -1.202 0.864 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity /// 0016787 // hydrolase activity 2.051 1.706 n n n ruditapes_c14643 1.209 0.864 1.382 1.67 n n n ruditapes_c7002 -1.264 0.864 signal recognition particle 14kda (homologous alu rna binding protein) "/// 0005786 // signal recognition particle, endoplasmic reticulum targeting /// 0030942 // endoplasmic reticulum signal peptide binding /// 0005515 // protein binding /// 0006614 // SRP-dependent cotranslational protein targeting to membrane /// 0008312 // 7S RNA binding /// 0045900 // negative regulation of translational elongation" 1.264 0.999 n n n ruditapes_lrc24627 -1.271 0.864 1.225 0.964 n n n ruditapes_c10675 -1.377 0.864 0.705 0.512 n n n ruditapes_c24263 -1.415 0.864 0.609 0.43 n n n ruditapes_c2235 1.518 0.864 fumarylacetoacetate hydrolase domain containing 1 /// 0046872 // metal ion binding /// 0003824 // catalytic activity /// 0005515 // protein binding /// 0005743 // mitochondrial inner membrane 0.268 0.407 n y n ruditapes_c18474 -1.483 0.864 0.479 0.323 n n n ruditapes_s35699 -1.483 0.864 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 0.479 0.323 n n n ruditapes_c2245 -2.224 0.864 0.144 0.065 n y n ruditapes_c30199 -2.224 0.864 0.143 0.064 n y n ruditapes2_c1221 ? 0.864 kazal-type serine protease inhibitor domain-containing protein 0 0.029 n y n ruditapes2_c2562 ? 0.864 zygote arrest 1 0 0.029 n y n ruditapes2_c2622 ? 0.864 cd209e antigen /// 0005488 // binding 0 0.029 n y n ruditapes2_c4822 ? 0.864 complement component q subcomponent-like 4 0 0.029 n y n ruditapes_c11486 ? 0.864 0 0.029 n y n ruditapes_c13056 ? 0.864 0 0.029 n y n ruditapes_c16706 ? 0.864 nervana 2 0 0.029 n y n ruditapes_c33641 ? 0.864 sarcoplasmic calcium-binding protein 0 0.029 n y n ruditapes_lrc33126 ? 0.864 ribosomal protein l21 0 0.029 n y n ruditapes_lrc39146 ? 0.864 0 0.029 n y n ruditapes2_c292 -1.031 0.865 104.556 101.426 n n n ruditapes_c256 -1.04 0.865 55.086 52.959 n n n ruditapes_c22338 1.085 0.865 7.067 7.669 n n n ruditapes_c21017 -1.104 0.865 7.08 6.412 n n n ruditapes2_c1338 1.102 0.865 chaperonin containing subunit 6a /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0051082 // unfolded protein binding /// 0006457 // protein folding 5.111 5.633 n n n ruditapes_c30265 1.107 0.865 4.659 5.158 n n n ruditapes_c15870 1.149 0.865 mitochondrial carnitine acylcarnitine carrier protein /// 0016020 // membrane 2.535 2.913 n n n ruditapes2_lrc3429 1.202 0.865 1.461 1.756 n n n ruditapes_c22120 -1.223 0.865 1.687 1.38 n n n ruditapes_c3813 1.263 0.865 0.888 1.122 n n n ruditapes_c24393 1.274 0.865 0.828 1.055 n n n ruditapes_c7750 1.28 0.865 0.803 1.028 n n n ruditapes_c13931 -1.359 0.865 0.753 0.554 n n n ruditapes_c28549 1.424 0.865 0.377 0.537 n n n ruditapes_c8323 1.461 0.865 0.324 0.473 n n n ruditapes_c22781 1.499 0.865 ash2 ( or homeotic)-like /// 0046872 // metal ion binding 0.282 0.423 n n n ruditapes_c12870 1.499 0.865 0.281 0.421 n n n ruditapes_s36908 1.574 0.865 ribosomal protein l7 0.218 0.343 n y n ruditapes_c2152 1.649 0.865 dmbt1 kb transcript 0.176 0.29 n y n ruditapes_c8248 1.799 0.865 0.125 0.224 n y n ruditapes2_lrc6279 -2.224 0.865 s-crystallin sl11 (major lens polypeptide) 0.141 0.064 n y n ruditapes_c10841 -2.224 0.865 0.14 0.063 n y n ruditapes_lrc36749 -2.224 0.865 alcohol dehydrogenase class-3 /// 0044237 // cellular metabolic process /// 0005488 // binding /// 0016491 // oxidoreductase activity 0.14 0.063 n y n ruditapes_c11354 ? 0.865 0 0.029 n y n ruditapes_c11367 ? 0.865 0 0.029 n y n ruditapes_c23553 ? 0.865 multicopper oxidase /// 0055114 // oxidation reduction /// 0005507 // copper ion binding /// 0016491 // oxidoreductase activity 0 0.029 n y n ruditapes_c24747 ? 0.865 tpa: sco-spondin precursor 0 0.029 n y n ruditapes_c28384 ? 0.865 0 0.029 n y n ruditapes_c3324 ? 0.865 0 0.029 n y n ruditapes_c5995 ? 0.865 0 0.029 n y n ruditapes_lrc33288 ? 0.865 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0.029 n y n ruditapes_c13376 1.078 0.866 bifunctional aminoacyl-trna synthetase /// 0006433 // prolyl-tRNA aminoacylation /// 0000166 // nucleotide binding /// 0006424 // glutamyl-tRNA aminoacylation /// 0004827 // proline-tRNA ligase activity /// 0017101 // aminoacyl-tRNA synthetase multienzyme complex /// 0004818 // glutamate-tRNA ligase activity 8.241 8.882 n n n ruditapes_lrc32108 1.08 0.866 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 7.83 8.457 n n n ruditapes_c3157 -1.106 0.866 6.856 6.2 n n n ruditapes_c14154 1.096 0.866 5.614 6.152 n n n ruditapes_c7970 1.104 0.866 papain family cysteine protease containing protein /// 0008233 // peptidase activity 4.84 5.342 n n n ruditapes_c17880 1.105 0.866 4.807 5.31 n n n ruditapes_c17480 -1.197 0.866 2.089 1.745 n n n ruditapes_c17501 -1.201 0.866 2.007 1.671 n n n ruditapes_c22311 1.267 0.866 0.854 1.082 n n n ruditapes_c17395 -1.26 0.866 1.276 1.012 n n n ruditapes_c21792 1.293 0.866 0.722 0.933 n n n ruditapes_c24657 1.299 0.866 0.7 0.91 n n n ruditapes_c26134 1.308 0.866 0.658 0.861 n n n ruditapes_c24680 1.349 0.866 0.523 0.706 n n n ruditapes2_c2473 1.39 0.866 0.432 0.6 n n n ruditapes_c18532 1.461 0.866 0.32 0.467 n n n ruditapes_c9347 1.461 0.866 tetratricopeptide repeat domain 25 /// 0005515 // protein binding /// 0005737 // cytoplasm 0.317 0.463 n n n ruditapes_c8414 -1.483 0.866 0.463 0.312 n n n ruditapes_c29547 -1.557 0.866 0.379 0.244 n y n ruditapes_c24429 -1.668 0.866 0.291 0.175 n y n ruditapes_lrc36488 2.248 0.866 calmodulin /// 0048856 // anatomical structure development /// 0065009 // regulation of molecular function /// 0006996 // organelle organization /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0048518 // positive regulation of biological process /// 0016020 // membrane /// 0005876 // spindle microtubule /// 0043005 // neuron projection /// 0044456 // synapse part /// 0004674 // protein serine/threonine kinase activity /// 0031432 // titin binding /// 0050793 // regulation of developmental process /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0009968 // negative regulation of signal transduction /// 0051049 // regulation of transport /// 0007611 // learning or memory /// 0032465 // regulation of cytokinesis /// 0048869 // cellular developmental process /// 0007619 // courtship behavior /// 0009790 // embryonic development /// 0016059 // deactivation of rhodopsin mediated signaling 0.059 0.132 n y n ruditapes_c11633 2.248 0.866 0.058 0.131 n y n ruditapes_c24754 -2.224 0.866 0.138 0.062 n y n ruditapes_c28179 -2.224 0.866 0.138 0.062 n y n ruditapes_lrc38721 -2.224 0.866 tandem repeat galectin 0.138 0.062 n y n ruditapes_c15277 ? 0.866 cg9395 cg9395-pa 0 0.029 n y n ruditapes_c20142 ? 0.866 0 0.029 n y n ruditapes_c27761 ? 0.866 0 0.029 n y n ruditapes2_c1448 ? 0.866 0 0.028 n y n ruditapes2_c1932 ? 0.866 0 0.028 n y n ruditapes2_c2573 ? 0.866 0 0.028 n y n ruditapes2_c2909 ? 0.866 0 0.028 n y n ruditapes_c11385 ? 0.866 0 0.028 n y n ruditapes_c14959 ? 0.866 0 0.028 n y n ruditapes_c20202 ? 0.866 type alpha 2 /// 0009987 // cellular process 0 0.028 n y n ruditapes_c24077 ? 0.866 0 0.028 n y n ruditapes_c26429 ? 0.866 0 0.028 n y n ruditapes_c28536 ? 0.866 0 0.028 n y n ruditapes_c28674 ? 0.866 0 0.028 n y n ruditapes_c5375 ? 0.866 connective tissue growth factor-related protein 0 0.028 n y n ruditapes_c5951 ? 0.866 0 0.028 n y n ruditapes_lrc28280 ? 0.866 achain crystal structure of tapes japonica lysozyme 0 0.028 n y n ruditapes2_c1671 -1.06 0.867 22.308 21.056 n n n ruditapes_c15610 1.082 0.867 7.441 8.05 n n n ruditapes2_lrc4424 -1.116 0.867 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 5.583 5.001 n n n ruditapes2_c464 -1.12 0.867 nadh dehydrogenase fe-s protein 3 /// 0006810 // transport /// 0022900 // electron transport chain /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005747 // mitochondrial respiratory chain complex I /// 0006917 // induction of apoptosis /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0030308 // negative regulation of cell growth 5.242 4.68 n n n ruditapes_c21290 -1.12 0.867 5.166 4.611 n n n ruditapes_c29330 1.152 0.867 ribophorin ii /// 0005789 // endoplasmic reticulum membrane /// 0016740 // transferase activity 2.408 2.773 n n n ruditapes_c24593 -1.161 0.867 2.965 2.553 n n n ruditapes_c5429 -1.223 0.867 glycoprotein iiia 1.645 1.345 n n n ruditapes_c27355 -1.251 0.867 1.324 1.059 n n n ruditapes_c19249 1.349 0.867 0.518 0.699 n n n ruditapes_c7598 -1.314 0.867 0.915 0.696 n n n ruditapes2_c1386 -1.318 0.867 glutaredoxin 2 /// 0010033 // response to organic substance /// 0005739 // mitochondrion /// 0006749 // glutathione metabolic process /// 0005634 // nucleus /// 0008794 // arsenate reductase (glutaredoxin) activity /// 0005488 // binding /// 0045454 // cell redox homeostasis /// 0015038 // glutathione disulfide oxidoreductase activity /// 0006467 // protein thiol-disulfide exchange /// 0042542 // response to hydrogen peroxide /// 0006980 // redox signal response 0.891 0.676 n n n ruditapes_c7121 -1.334 0.867 cerebellin 3 precursor 0.816 0.612 n n n ruditapes2_c522 -1.35 0.867 hypothetical protein PE36_20230 [Moritella sp. PE36] 0.764 0.566 n n n ruditapes_c28467 1.439 0.867 0.344 0.495 n n n ruditapes_c9973 -1.39 0.867 0.639 0.46 n n n ruditapes_lrc32354 1.529 0.867 protein 0.247 0.378 n y n ruditapes_c24000 1.574 0.867 0.213 0.335 n y n ruditapes_s39996 1.574 0.867 0.212 0.333 n y n ruditapes_c13968 -1.483 0.867 0.46 0.31 n n n ruditapes_lrc10623 1.649 0.867 0.173 0.286 n y n ruditapes_c1073 1.799 0.867 cathepsin l /// 0005515 // protein binding /// 0004197 // cysteine-type endopeptidase activity 0.12 0.217 n y n ruditapes_c10641 -1.588 0.867 tyramine beta hydroxylase /// 0006548 // histidine catabolic process /// 0005507 // copper ion binding /// 0008049 // male courtship behavior /// 0004500 // dopamine beta-monooxygenase activity /// 0048149 // behavioral response to ethanol /// 0008345 // larval locomotory behavior /// 0050795 // regulation of behavior /// 0043059 // regulation of forward locomotion /// 0030728 // ovulation /// 0006584 // catecholamine metabolic process /// 0007613 // memory /// 0006589 // octopamine biosynthetic process 0.344 0.216 n y n ruditapes_c26124 -1.668 0.867 "PREDICTED: hypothetical protein, partial [Homo sapiens]" 0.287 0.172 n y n ruditapes_c26102 -2.224 0.867 0.137 0.062 n y n ruditapes2_c3704 ? 0.867 0 0.028 n y n ruditapes2_lrc5165 ? 0.867 0 0.028 n y n ruditapes2_lrc5305 ? 0.867 signal transduction protein with efhand domain 0 0.028 n y n ruditapes_c10263 ? 0.867 0 0.028 n y n ruditapes_c11351 ? 0.867 0 0.028 n y n ruditapes_c23473 ? 0.867 0 0.028 n y n ruditapes_c4969 ? 0.867 0 0.028 n y n ruditapes_c7106 ? 0.867 tena thi-4 protein 0 0.028 n y n ruditapes_c31006 -1.104 0.868 6.902 6.254 n n n ruditapes_c3922 -1.12 0.868 5.153 4.601 n n n ruditapes_lrc10183 1.124 0.868 kallikrein plasma (fletcher factor) 1 /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0005737 // cytoplasm /// 0004252 // serine-type endopeptidase activity /// 0002542 // Factor XII activation 3.416 3.84 n n n ruditapes_lrc12411 -1.156 0.868 3.082 2.665 n n n ruditapes_lrc24518 1.193 0.868 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 1.518 1.811 n n n ruditapes_lrc38390 -1.19 0.868 nadh dehydrogenase iron-sulfur protein 5 2.14 1.798 n n n ruditapes_c20776 -1.207 0.868 1.831 1.517 n n n ruditapes_c25747 1.267 0.868 0.829 1.05 n n n ruditapes_c17235 -1.271 0.868 1.151 0.906 n n n ruditapes_c9577 1.461 0.868 0.307 0.449 n n n ruditapes_c28460 -1.415 0.868 0.574 0.405 n n n ruditapes_c10097 -1.415 0.868 0.569 0.402 n n n ruditapes_c20793 -1.415 0.868 0.569 0.402 n n n ruditapes_lrc36555 -1.415 0.868 0.565 0.399 n n n ruditapes2_c1419 -1.43 0.868 0.538 0.376 n n n ruditapes_c17656 -1.483 0.868 0.453 0.306 n n n ruditapes_c4146 -1.588 0.868 0.335 0.211 n y n ruditapes_lrc38055 -1.668 0.868 0.285 0.171 n y n ruditapes_lrc35384 -1.779 0.868 0.231 0.13 n y n ruditapes_lrc31620 -2.224 0.868 hypothetical protein BRAFLDRAFT_63343 [Branchiostoma floridae] 0.135 0.061 n y n ruditapes_c26176 -2.224 0.868 0.134 0.06 n y n ruditapes_c28281 -2.224 0.868 0.134 0.06 n y n ruditapes_lrc28971 -2.224 0.868 pi-class glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0008152 // metabolic process 0.134 0.06 n y n ruditapes2_c6165 -2.224 0.868 0.133 0.06 n y n ruditapes2_c2176 ? 0.868 ninjurin 1 0 0.028 n y n ruditapes2_lrc4372 ? 0.868 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0.028 n y n ruditapes_c12705 ? 0.868 0 0.028 n y n ruditapes_c14309 ? 0.868 0 0.028 n y n ruditapes_c25170 ? 0.868 multicopper oxidase /// 0005488 // binding 0 0.028 n y n ruditapes_c28766 ? 0.868 0 0.028 n y n ruditapes_c29545 ? 0.868 homeostatic thymus hormone alpha /// 0005694 // chromosome 0 0.028 n y n ruditapes_lrc33615 ? 0.868 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity /// 0009792 // embryonic development ending in birth or egg hatching 0 0.028 n y n ruditapes_lrc35822 ? 0.868 0 0.028 n y n ruditapes2_c1349 ? 0.868 0 0.027 n y n ruditapes_lrc36799 ? 0.868 microfibril-associated glycoprotein 4 0 0.027 n y n ruditapes_lrc22932 -? 0.868 0.028 0 n y n ruditapes2_c2915 1.06 0.869 12.3 13.043 n n n ruditapes2_c1457 -1.104 0.869 6.757 6.119 n n n ruditapes_c14335 1.107 0.869 4.385 4.856 n n n ruditapes_c23701 1.119 0.869 family with sequence similarity member b 3.618 4.049 n n n ruditapes_c7902 -1.137 0.869 succinate dehydrogenase complex subunit d /// 0044464 // cell part 3.926 3.453 n n n ruditapes2_c1327 -1.177 0.869 2.424 2.059 n n n ruditapes_c11271 1.178 0.869 1.732 2.04 n n n ruditapes_c15025 -1.197 0.869 1.989 1.661 n n n ruditapes_c29236 1.249 0.869 0.928 1.159 n n n ruditapes_c6929 1.251 0.869 chitinase 7 "/// 0005576 // extracellular region /// 0005488 // binding /// 0004553 // hydrolase activity, hydrolyzing O-glycosyl compounds /// 0050896 // response to stimulus /// 0006030 // chitin metabolic process /// 0009056 // catabolic process" 0.915 1.145 n n n ruditapes2_c2977 -1.271 0.869 1.126 0.886 n n n ruditapes_c20929 1.299 0.869 0.668 0.867 n n n ruditapes2_c469 1.499 0.869 universal stress protein 0.266 0.399 n n n ruditapes_s35034 -1.415 0.869 0.562 0.397 n n n ruditapes_c16262 1.574 0.869 0.206 0.324 n y n ruditapes_c23400 -1.483 0.869 0.448 0.302 n n n ruditapes_c22267 -1.483 0.869 0.446 0.301 n n n ruditapes_c36164 -1.588 0.869 0.333 0.21 n y n ruditapes_c17251 -2.224 0.869 cerebellin 3 precursor 0.132 0.06 n y n ruditapes_c11057 -2.224 0.869 0.132 0.059 n y n ruditapes_c23096 -2.224 0.869 PREDICTED: hypothetical protein [Hydra magnipapillata] 0.132 0.059 n y n ruditapes_c10049 -2.224 0.869 0.131 0.059 n y n ruditapes_lrc26966 -2.224 0.869 0.131 0.059 n y n ruditapes2_lrc5783 ? 0.869 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0 0.027 n y n ruditapes2_lrc6129 ? 0.869 ly-6 neurotoxin-related protein 0 0.027 n y n ruditapes_c11370 ? 0.869 0 0.027 n y n ruditapes_c11371 ? 0.869 0 0.027 n y n ruditapes_c14054 ? 0.869 0 0.027 n y n ruditapes_c15249 ? 0.869 0 0.027 n y n ruditapes_c6260 ? 0.869 0 0.027 n y n ruditapes_c6629 ? 0.869 0 0.027 n y n ruditapes_c9778 ? 0.869 0 0.027 n y n ruditapes2_lrc2606 -1.059 0.87 nucleoside diphosphate kinase /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process 21.383 20.191 n n n ruditapes2_c2170 -1.064 0.87 17.901 16.819 n n n ruditapes2_c1762 -1.085 0.87 10.058 9.273 n n n ruditapes2_c2097 -1.119 0.87 5.097 4.556 n n n ruditapes2_c1822 -1.145 0.87 3.505 3.062 n n n ruditapes_c12362 1.145 0.87 mannosyl phosphorylinositol ceramide synthase sur1 /// 0044424 // intracellular part 2.452 2.808 n n n ruditapes_c9977 -1.167 0.87 2.685 2.302 n n n ruditapes_c31435 1.242 0.87 0.96 1.192 n n n ruditapes_c1492 1.278 0.87 0.749 0.957 n n n ruditapes_c24772 1.285 0.87 0.71 0.912 n n n ruditapes_lrc35628 -1.271 0.87 fatty acid binding protein 4 /// 0044444 // cytoplasmic part /// 0045444 // fat cell differentiation /// 0048518 // positive regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0050896 // response to stimulus /// 0044249 // cellular biosynthetic process /// 0050794 // regulation of cellular process /// 0008289 // lipid binding /// 0044255 // cellular lipid metabolic process 1.12 0.881 n n n ruditapes2_c12 1.431 0.87 0.34 0.486 n n n ruditapes_c24976 -1.368 0.87 0.664 0.485 n n n ruditapes_c30155 1.461 0.87 0.299 0.437 n n n ruditapes_lrc32840 1.461 0.87 ubiquinol-cytochrome c complex iii subunit vii 0.297 0.434 n n n ruditapes2_c4251 1.619 0.87 caprin family member 2 0.179 0.29 n y n ruditapes_c34858 2.248 0.87 triosephosphate isomerase /// 0004807 // triose-phosphate isomerase activity /// 0006633 // fatty acid biosynthetic process /// 0048046 // apoplast /// 0005739 // mitochondrion /// 0006096 // glycolysis /// 0005886 // plasma membrane /// 0009570 // chloroplast stroma /// 0005829 // cytosol /// 0006098 // pentose-phosphate shunt /// 0006094 // gluconeogenesis /// 0046686 // response to cadmium ion /// 0009651 // response to salt stress /// 0005618 // cell wall 0.055 0.124 n y n ruditapes_lrc15314 2.248 0.87 0.055 0.124 n y n ruditapes2_c1982 ? 0.87 0 0.027 n y n ruditapes2_c3510 ? 0.87 0 0.027 n y n ruditapes2_lrc1702 ? 0.87 0 0.027 n y n ruditapes2_lrc3086 ? 0.87 0 0.027 n y n ruditapes2_lrc3655 ? 0.87 ly-6 neurotoxin-related protein 0 0.027 n y n ruditapes_c11233 ? 0.87 0 0.027 n y n ruditapes_c17013 ? 0.87 transmembrane protein 86a 0 0.027 n y n ruditapes_c2762 ? 0.87 0 0.027 n y n ruditapes_c28324 ? 0.87 0 0.027 n y n ruditapes_c32020 ? 0.87 0 0.027 n y n ruditapes_c762 ? 0.87 0 0.027 n y n ruditapes_c9606 ? 0.87 scavenger receptor cysteine-rich protein type 12 precursor /// 0003824 // catalytic activity 0 0.027 n y n ruditapes_lrc34414 ? 0.87 0 0.027 n y n ruditapes_lrc35356 ? 0.87 mannose c type 2 0 0.027 n y n ruditapes_c5459 1.042 0.871 23.089 24.049 n n n ruditapes_c1755 1.047 0.871 18.418 19.29 n n n ruditapes_c12132 -1.07 0.871 PREDICTED: hypothetical protein [Homo sapiens] 14.731 13.767 n n n ruditapes_c8793 1.098 0.871 5.012 5.504 n n n ruditapes_c1508 1.158 0.871 2.101 2.432 n n n ruditapes_c12544 -1.16 0.871 2.818 2.428 n n n ruditapes_c1736 -1.202 0.871 1.835 1.527 n n n ruditapes_c20709 1.221 0.871 1.123 1.371 n n n ruditapes_c7916 -1.251 0.871 1.257 1.005 n n n ruditapes_c30021 -1.254 0.871 1.219 0.972 n n n ruditapes_c19927 1.293 0.871 hypothetical protein BRAFLDRAFT_104092 [Branchiostoma floridae] 0.671 0.868 n n n ruditapes_c22911 -1.368 0.871 0.653 0.477 n n n ruditapes_c22524 1.499 0.871 proteasome inhibitor subunit 1 0.255 0.382 n n n ruditapes_c7443 -1.483 0.871 0.433 0.292 n n n ruditapes_c26793 -1.483 0.871 0.432 0.291 n n n ruditapes_c21508 -1.483 0.871 0.431 0.291 n n n ruditapes2_c4665 -1.483 0.871 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 0.43 0.29 n n n ruditapes_c6123 -1.668 0.871 0.269 0.162 n y n ruditapes_c23664 2.248 0.871 hypothetical protein BRAFLDRAFT_67949 [Branchiostoma floridae] 0.054 0.122 n y n ruditapes_c6616 2.248 0.871 0.054 0.122 n y n ruditapes_c28510 -2.224 0.871 0.128 0.057 n y n ruditapes_c9295 ? 0.871 0 0.027 n y n ruditapes2_c1948 ? 0.871 0 0.026 n y n ruditapes2_c3878 ? 0.871 0 0.026 n y n ruditapes_c10907 ? 0.871 0 0.026 n y n ruditapes_c1667 ? 0.871 0 0.026 n y n ruditapes_c30639 ? 0.871 0 0.026 n y n ruditapes_c31728 ? 0.871 0 0.026 n y n ruditapes_c7937 ? 0.871 0 0.026 n y n ruditapes_c8371 ? 0.871 0 0.026 n y n ruditapes_lrc37074 ? 0.871 cytochrome c oxidase subunit va 0 0.026 n y n ruditapes2_lrc3323 -? 0.871 polymorphic mucin variant c6 1 0.026 0 n y n ruditapes_c10318 -1.037 0.872 61.622 59.439 n n n ruditapes2_c1399 1.077 0.872 7.628 8.214 n n n ruditapes_c23936 -1.094 0.872 7.935 7.255 n n n ruditapes_lrc34740 1.108 0.872 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0042273 // ribosomal large subunit biogenesis 4.15 4.597 n n n ruditapes_c12011 -1.122 0.872 arylsulfatase h /// 0046872 // metal ion binding /// 0008484 // sulfuric ester hydrolase activity 4.713 4.202 n n n ruditapes_c7204 -1.127 0.872 4.371 3.879 n n n ruditapes_c15376 -1.136 0.872 cytoplasmic intermediate filament protein 3.792 3.339 n n n ruditapes_c8344 -1.168 0.872 2.551 2.183 n n n ruditapes_c17508 -1.219 0.872 1.575 1.291 n n n ruditapes_lrc33232 -1.223 0.872 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 1.507 1.232 n n n ruditapes_c22149 -1.26 0.872 1.164 0.924 n n n ruditapes_c20876 -1.308 0.872 0.866 0.662 n n n ruditapes2_c402 1.349 0.872 complement component c3 0.48 0.648 n n n ruditapes_c26359 -1.334 0.872 0.759 0.569 n n n ruditapes_c1707 1.394 0.872 0.382 0.532 n n n ruditapes_c11717 1.499 0.872 tumor protein p53 inducible nuclear protein 2 0.253 0.379 n n n ruditapes_c15819 -1.483 0.872 0.423 0.285 n n n ruditapes2_c1297 1.649 0.872 0.16 0.263 n y n ruditapes_c21004 -1.668 0.872 0.267 0.16 n y n ruditapes_c29570 -1.668 0.872 0.266 0.159 n y n ruditapes_s39518 -1.668 0.872 chromosome 4 open reading frame 34 /// 0005515 // protein binding /// 0016021 // integral to membrane 0.264 0.159 n y n ruditapes_lrc39251 -2.224 0.872 0.127 0.057 n y n ruditapes2_c5154 ? 0.872 mannose c type 1-like 1 0 0.026 n y n ruditapes2_lrc3470 ? 0.872 0 0.026 n y n ruditapes_c16590 ? 0.872 0 0.026 n y n ruditapes_c18520 ? 0.872 hypothetical protein BRAFLDRAFT_92388 [Branchiostoma floridae] 0 0.026 n y n ruditapes_c189 ? 0.872 hemagglutinin amebocyte aggregation factor precursor 0 0.026 n y n ruditapes_c22685 ? 0.872 0 0.026 n y n ruditapes_c31461 ? 0.872 0 0.026 n y n ruditapes_c33779 ? 0.872 musashi homolog 2 /// 0008266 // poly(U) RNA binding /// 0000166 // nucleotide binding /// 0005844 // polysome /// 0005737 // cytoplasm 0 0.026 n y n ruditapes_c4919 ? 0.872 ly-6 neurotoxin-related protein 0 0.026 n y n ruditapes_c6723 ? 0.872 0 0.026 n y n ruditapes_lrc32792 ? 0.872 serum amyloid a 0 0.026 n y n ruditapes_lrc33806 ? 0.872 ubiquinol-cytochrome c reductase hinge protein /// 0009060 // aerobic respiration /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain /// 0008121 // ubiquinol-cytochrome-c reductase activity 0 0.026 n y n ruditapes_lrc34114 -1.035 0.873 ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0012505 // endomembrane system /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0030425 // dendrite /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development /// 0051536 // iron-sulfur cluster binding 67.442 65.148 n n n ruditapes_c15194 -1.089 0.873 adaptor-related protein complex delta 1 subunit /// 0006810 // transport /// 0044444 // cytoplasmic part /// 0009987 // cellular process 8.522 7.822 n n n ruditapes_c16189 -1.106 0.873 6.069 5.489 n n n ruditapes_c12818 1.113 0.873 3.743 4.167 n n n ruditapes_c5006 -1.133 0.873 3.889 3.431 n n n ruditapes_c5572 1.154 0.873 2.123 2.449 n n n ruditapes2_c859 -1.175 0.873 2.314 1.97 n n n ruditapes2_c1640 -1.18 0.873 rwd domain containing 1 2.211 1.874 n n n ruditapes_c26830 -1.235 0.873 1.35 1.093 n n n ruditapes_c18253 1.259 0.873 0.811 1.021 n n n ruditapes2_c751 -1.257 0.873 1.168 0.929 n n n ruditapes2_c3944 -1.271 0.873 translocon-associated protein gamma /// 0005811 // lipid particle /// 0005789 // endoplasmic reticulum membrane /// 0032991 // macromolecular complex 1.07 0.842 n n n ruditapes_c7473 -1.271 0.873 1.067 0.84 n n n ruditapes_c16850 -1.304 0.873 peptidyl-trna hydrolase 2 0.872 0.669 n n n ruditapes_c24224 -1.308 0.873 0.86 0.657 n n n ruditapes_c20375 -1.308 0.873 0.848 0.649 n n n ruditapes_c21185 1.349 0.873 0.47 0.634 n n n ruditapes_c9754 -1.334 0.873 0.742 0.556 n n n ruditapes_c19041 1.499 0.873 toxin i 0.247 0.37 n n n ruditapes_c25355 1.499 0.873 e74-like factor 5 0.246 0.369 n n n ruditapes_c15488 1.799 0.873 PREDICTED: similar to transposase [Strongylocentrotus purpuratus] 0.109 0.197 n y n ruditapes_c28016 -1.668 0.873 0.263 0.158 n y n ruditapes2_lrc6471 -1.668 0.873 0.26 0.156 n y n ruditapes_c15389 -2.224 0.873 0.125 0.056 n y n ruditapes2_c1149 ? 0.873 0 0.026 n y n ruditapes2_c2854 ? 0.873 0 0.026 n y n ruditapes_c7705 ? 0.873 0 0.026 n y n ruditapes_c17162 ? 0.873 0 0.025 n y n ruditapes_c8957 1.044 0.874 erythrocyte protein band -like 3 /// 0016020 // membrane 20.096 20.971 n n n ruditapes_c7425 -1.097 0.874 7.062 6.436 n n n ruditapes_lrc12745 1.095 0.874 5.027 5.506 n n n ruditapes_lrc8210 1.131 0.874 2.812 3.181 n n n ruditapes_c23516 -1.138 0.874 rad9 homolog a ( pombe) 3.562 3.129 n n n ruditapes_c4033 -1.14 0.874 elongation factor 1 delta 3.461 3.036 n n n ruditapes_lrc21794 -1.156 0.874 2.805 2.426 n n n ruditapes2_lrc3671 1.156 0.874 member of ras oncogene family-like 4 2.013 2.328 n n n ruditapes_c11941 -1.162 0.874 2.61 2.245 n n n ruditapes_c9063 1.186 0.874 heart and neural crest derivatives expressed 2 /// 0016563 // transcription activator activity /// 0003700 // transcription factor activity /// 0019904 // protein domain specific binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0007512 // adult heart development /// 0001701 // in utero embryonic development /// 0014032 // neural crest cell development /// 0046982 // protein heterodimerization activity /// 0006915 // apoptosis /// 0005667 // transcription factor complex /// 0042803 // protein homodimerization activity /// 0001947 // heart looping 1.472 1.746 n n n ruditapes_c26259 -1.202 0.874 1.759 1.464 n n n ruditapes_c11847 1.237 0.874 alpha-amylase /// 0003824 // catalytic activity /// 0008152 // metabolic process /// 0043167 // ion binding 0.951 1.176 n n n ruditapes_c36269 1.293 0.874 mitochondrial ribosomal protein l51 0.639 0.826 n n n ruditapes_c18799 -1.271 0.874 1.04 0.818 n n n ruditapes2_c2634 -1.287 0.874 0.95 0.738 n n n ruditapes_c31608 -1.297 0.874 0.898 0.692 n n n ruditapes_c20150 1.349 0.874 0.465 0.627 n n n ruditapes_c22660 1.349 0.874 0.462 0.623 n n n ruditapes_c7745 1.349 0.874 alpha-amylase /// 0003824 // catalytic activity /// 0043167 // ion binding 0.462 0.623 n n n ruditapes2_c2200 1.439 0.874 ef-hand calcium binding domain 7 0.309 0.445 n n n ruditapes2_lrc6868 1.461 0.874 cytochrome c oxidase subunit via polypeptide 1 /// 0005739 // mitochondrion /// 0016020 // membrane /// 0008152 // metabolic process 0.279 0.408 n n n ruditapes_lrc35059 -1.415 0.874 thioredoxin domain-containing protein 17 0.518 0.366 n n n ruditapes2_lrc6148 1.649 0.874 0.154 0.255 n y n ruditapes_c19570 -1.668 0.874 0.257 0.154 n y n ruditapes_lrc32936 -1.668 0.874 hypothetical protein [Paramecium tetraurelia strain d4-2] 0.257 0.154 n y n ruditapes2_c1817 -2.224 0.874 0.122 0.055 n y n ruditapes2_c1991 ? 0.874 0 0.025 n y n ruditapes2_c2522 ? 0.874 protein tyrosine receptor o /// 0016787 // hydrolase activity 0 0.025 n y n ruditapes_c11447 ? 0.874 0 0.025 n y n ruditapes_c11896 ? 0.874 0 0.025 n y n ruditapes_c142 ? 0.874 retinoic acid receptor responder protein 3 0 0.025 n y n ruditapes_c23080 ? 0.874 0 0.025 n y n ruditapes_c249 ? 0.874 0 0.025 n y n ruditapes_c30763 ? 0.874 0 0.025 n y n ruditapes_c3426 ? 0.874 unknown protein 9 [Haliotis diversicolor] 0 0.025 n y n ruditapes_lrc12848 ? 0.874 0 0.025 n y n ruditapes_lrc36081 ? 0.874 plac8-like 1 0 0.025 n y n ruditapes_lrc33291 1.075 0.875 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 7.612 8.183 n n n ruditapes_c5996 -1.093 0.875 proteasome ( macropain) beta 1 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding 7.618 6.968 n n n ruditapes_c11042 1.101 0.875 4.445 4.896 n n n ruditapes_c10106 -1.112 0.875 5.325 4.789 n n n ruditapes_c244 -1.15 0.875 2.981 2.591 n n n ruditapes_c17555 1.159 0.875 1.925 2.231 n n n ruditapes_c24115 1.176 0.875 1.598 1.879 n n n ruditapes_c7332 -1.192 0.875 trafficking protein particle complex 1.896 1.59 n n n ruditapes_lrc32246 -1.245 0.875 1.223 0.982 n n n ruditapes_c15446 1.267 0.875 0.744 0.943 n n n ruditapes_c15926 -1.308 0.875 0.832 0.636 n n n ruditapes_c20559 -1.354 0.875 0.66 0.488 n n n ruditapes2_c1179 -1.368 0.875 0.616 0.45 n n n ruditapes_c18245 -1.368 0.875 0.615 0.449 n n n ruditapes2_c4745 1.439 0.875 ring-box 1 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0006281 // DNA repair /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0019005 // SCF ubiquitin ligase complex /// 0008270 // zinc ion binding /// 0005680 // anaphase-promoting complex /// 0004842 // ubiquitin-protein ligase activity /// 0008190 // eukaryotic initiation factor 4E binding /// 0030891 // VCB complex 0.302 0.435 n n n ruditapes_c10871 -1.415 0.875 0.512 0.362 n n n ruditapes_c7269 1.499 0.875 0.239 0.358 n n n ruditapes_c29077 -1.483 0.875 0.404 0.272 n n n ruditapes_c29882 -1.483 0.875 0.403 0.272 n n n ruditapes_c1683 -1.588 0.875 immunity adhesion receptor cd209l2 /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0016020 // membrane /// 0009987 // cellular process 0.304 0.191 n y n ruditapes_s36888 1.799 0.875 0.106 0.191 n y n ruditapes_c10170 -1.668 0.875 0.255 0.153 n y n ruditapes_c12471 -1.668 0.875 member ras oncogene family /// 0007264 // small GTPase mediated signal transduction /// 0005524 // ATP binding /// 0015031 // protein transport /// 0005739 // mitochondrion /// 0006468 // protein amino acid phosphorylation /// 0005525 // GTP binding /// 0004672 // protein kinase activity 0.252 0.151 n y n ruditapes_c13624 -2.224 0.875 0.121 0.054 n y n ruditapes_c23821 -2.224 0.875 serine protease inhibitor-like spi-1 protein 0.121 0.054 n y n ruditapes2_c1983 ? 0.875 0 0.025 n y n ruditapes_c11013 ? 0.875 tena thi-4 protein 0 0.025 n y n ruditapes_c2247 ? 0.875 0 0.025 n y n ruditapes_c30490 ? 0.875 0 0.025 n y n ruditapes_c34561 ? 0.875 c-type lectin /// 0005488 // binding 0 0.025 n y n ruditapes_c7181 ? 0.875 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0032502 // developmental process /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.025 n y n ruditapes_c9253 ? 0.875 0 0.025 n y n ruditapes_c9503 ? 0.875 b chain core-streptavidin mutant w79f at ph 0 0.025 n y n ruditapes_lrc16937 ? 0.875 0 0.025 n y n ruditapes_lrc33609 ? 0.875 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.025 n y n ruditapes_c16895 -1.102 0.876 6.324 5.74 n n n ruditapes_c11116 1.098 0.876 queuine trna-ribosyltransferase domain containing 1 4.574 5.023 n n n ruditapes_c4574 1.115 0.876 3.46 3.858 n n n ruditapes_c17593 -1.138 0.876 3.494 3.071 n n n ruditapes2_c474 1.149 0.876 small nuclear ribonucleoprotein polypeptide f /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 2.135 2.454 n n n ruditapes2_c263 -1.186 0.876 1.963 1.655 n n n ruditapes_c19210 -1.189 0.876 1.922 1.616 n n n ruditapes_c9363 1.199 0.876 1.26 1.511 n n n ruditapes_lrc32162 1.214 0.876 myosin heavy chain /// 0005488 // binding 1.105 1.342 n n n ruditapes_c31092 1.226 0.876 0.983 1.206 n n n ruditapes_c8481 -1.241 0.876 1.235 0.995 n n n ruditapes2_c2623 -1.241 0.876 1.234 0.994 n n n ruditapes_lrc39275 -1.271 0.876 ribosomal protein l7 1.023 0.805 n n n ruditapes_c11080 -1.286 0.876 0.932 0.725 n n n ruditapes_c22754 -1.287 0.876 0.915 0.711 n n n ruditapes2_c4045 -1.304 0.876 mitochondrial nadh:ubiquinone oxidoreductase esss 0.835 0.64 n n n ruditapes_c21993 -1.308 0.876 0.821 0.628 n n n ruditapes_c21890 1.349 0.876 0.45 0.607 n n n ruditapes_c29847 -1.334 0.876 0.716 0.537 n n n ruditapes_c24373 -1.334 0.876 guanylyl cyclase /// 0006182 // cGMP biosynthetic process /// 0007600 // sensory perception /// 0016021 // integral to membrane /// 0004672 // protein kinase activity /// 0004383 // guanylate cyclase activity 0.707 0.53 n n n ruditapes_s35652 -1.39 0.876 40s ribosomal protein s10 0.557 0.401 n n n ruditapes_c17972 -1.39 0.876 0.551 0.396 n n n ruditapes_c4439 1.499 0.876 PREDICTED: similar to conserved hypothetical protein [Hydra magnipapillata] 0.235 0.352 n n n ruditapes_c25920 -1.483 0.876 0.396 0.267 n n n ruditapes_c20012 -1.668 0.876 0.25 0.15 n y n ruditapes_c29058 -1.779 0.876 0.201 0.113 n y n ruditapes_c26174 -2.224 0.876 0.117 0.053 n y n ruditapes2_c3855 ? 0.876 0 0.024 n y n ruditapes_c26609 ? 0.876 0 0.024 n y n ruditapes_c29988 ? 0.876 0 0.024 n y n ruditapes_c7723 ? 0.876 0 0.024 n y n ruditapes_c7794 ? 0.876 0 0.024 n y n ruditapes_lrc34075 ? 0.876 0 0.024 n y n ruditapes_c8027 -1.044 0.877 36.478 34.928 n n n ruditapes_c24719 -1.07 0.877 13.412 12.534 n n n ruditapes_c16345 -1.082 0.877 9.535 8.811 n n n ruditapes_c20460 -1.083 0.877 9.394 8.674 n n n ruditapes_c14108 -1.095 0.877 7.114 6.498 n n n ruditapes2_c4445 1.097 0.877 4.661 5.111 n n n ruditapes_c19569 -1.112 0.877 5.146 4.628 n n n ruditapes_c18922 -1.112 0.877 5.14 4.623 n n n ruditapes_c29407 1.109 0.877 3.735 4.143 n n n ruditapes_c15787 -1.136 0.877 3.526 3.106 n n n ruditapes_c26922 1.133 0.877 2.577 2.921 n n n ruditapes_c3793 1.149 0.877 2.101 2.415 n n n ruditapes2_c2472 -1.16 0.877 2.567 2.213 n n n ruditapes2_c1287 -1.161 0.877 2.517 2.168 n n n ruditapes_c7780 -1.165 0.877 2.424 2.081 n n n ruditapes_c10664 1.175 0.877 1.562 1.836 n n n ruditapes_c9700 1.178 0.877 1.507 1.776 n n n ruditapes2_lrc4138 1.199 0.877 1.243 1.49 n n n ruditapes_c20934 1.229 0.877 0.948 1.165 n n n ruditapes_c18980 1.293 0.877 0.61 0.789 n n n ruditapes_c18001 -1.287 0.877 0.899 0.699 n n n ruditapes_c30311 -1.39 0.877 0.547 0.394 n n n ruditapes_c11600 -1.557 0.877 0.318 0.204 n y n ruditapes_s35146 1.799 0.877 0.104 0.186 n y n ruditapes_c36861 -2.224 0.877 mitochondrial ribosomal protein s14 /// 0044444 // cytoplasmic part /// 0043229 // intracellular organelle 0.117 0.052 n y n ruditapes2_c1436 ? 0.877 0 0.024 n y n ruditapes2_lrc6472 ? 0.877 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.024 n y n ruditapes_c1183 ? 0.877 0 0.024 n y n ruditapes_c26203 ? 0.877 0 0.024 n y n ruditapes_c29864 ? 0.877 0 0.024 n y n ruditapes_c3386 ? 0.877 0 0.024 n y n ruditapes_lrc23217 ? 0.877 0 0.024 n y n ruditapes_lrc32364 ? 0.877 0 0.024 n y n ruditapes2_lrc5042 1.033 0.878 ubiquitin a-52 residue ribosomal protein fusion product 1 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome /// 0006464 // protein modification process 30.064 31.062 n n n ruditapes_c1006 -1.08 0.878 9.985 9.248 n n n ruditapes_c18723 1.076 0.878 7.111 7.652 n n n ruditapes2_c2826 -1.091 0.878 7.722 7.081 n n n ruditapes2_c2763 1.101 0.878 ropporin 1-like /// 0008603 // cAMP-dependent protein kinase regulator activity /// 0007165 // signal transduction 4.188 4.612 n n n ruditapes_c13004 -1.158 0.878 2.598 2.244 n n n ruditapes_c17460 -1.16 0.878 2.529 2.179 n n n ruditapes_c21904 1.19 0.878 1.328 1.581 n n n ruditapes_lrc34801 -1.197 0.878 1.726 1.442 n n n ruditapes_c16635 -1.206 0.878 case a 1.581 1.311 n n n ruditapes_c7318 -1.235 0.878 1.25 1.012 n n n ruditapes_c6028 1.259 0.878 0.752 0.947 n n n ruditapes2_c5467 -1.271 0.878 0.985 0.776 n n n ruditapes_c10400 -1.271 0.878 0.977 0.769 n n n ruditapes_lrc32898 1.312 0.878 osteoblast specific factor 0.537 0.704 n n n ruditapes_c25536 -1.287 0.878 0.892 0.693 n n n ruditapes_c9839 -1.308 0.878 0.794 0.607 n n n ruditapes_c23591 -1.334 0.878 0.693 0.519 n n n ruditapes_c23239 -1.334 0.878 0.687 0.515 n n n ruditapes_c28086 1.424 0.878 acetylserotonin o-methyltransferase-like /// 0030187 // melatonin biosynthetic process /// 0005737 // cytoplasm /// 0017096 // acetylserotonin O-methyltransferase activity 0.304 0.433 n n n ruditapes_lrc33048 -1.368 0.878 death-associated protein /// 0005488 // binding /// 0009987 // cellular process 0.588 0.429 n n n ruditapes_c4980 1.499 0.878 0.23 0.345 n n n ruditapes_c23545 1.499 0.878 0.229 0.343 n n n ruditapes2_c2803 1.574 0.878 0.18 0.283 n y n ruditapes_c20224 1.574 0.878 0.18 0.283 n y n ruditapes_lrc36841 1.574 0.878 0.18 0.283 n y n ruditapes_c25495 -1.483 0.878 0.388 0.262 n n n ruditapes_c28046 -1.483 0.878 0.386 0.26 n n n ruditapes_c29691 -1.588 0.878 transmembrane amino acid transporter protein /// 0016020 // membrane /// 0040011 // locomotion 0.289 0.182 n y n ruditapes_s35498 1.799 0.878 0.101 0.182 n y n ruditapes_s38840 -1.668 0.878 0.24 0.144 n y n ruditapes2_lrc4243 -2.224 0.878 0.114 0.051 n y n ruditapes_c9771 -2.224 0.878 0.114 0.051 n y n ruditapes_lrc34051 -2.224 0.878 0.114 0.051 n y n ruditapes_c11197 ? 0.878 0 0.024 n y n ruditapes_c17195 ? 0.878 0 0.024 n y n ruditapes_c2452 ? 0.878 isoform b 0 0.023 n y n ruditapes_c15043 -1.094 0.879 7.011 6.408 n n n ruditapes2_c5141 1.109 0.879 3.595 3.988 n n n ruditapes_c15409 -1.123 0.879 guanine nucleotide binding protein (g protein) gamma 7 /// 0007168 // receptor guanylyl cyclase signaling pathway /// 0008277 // regulation of G-protein coupled receptor protein signaling pathway /// 0009755 // hormone-mediated signaling /// 0005834 // heterotrimeric G-protein complex /// 0001662 // behavioral fear response /// 0004871 // signal transducer activity /// 0007626 // locomotory behavior 4.133 3.68 n n n ruditapes_c30019 1.142 0.879 2.236 2.552 n n n ruditapes2_c2448 1.183 0.879 1.391 1.646 n n n ruditapes_c20942 -1.186 0.879 1.882 1.587 n n n ruditapes_c17167 1.19 0.879 1.299 1.546 n n n ruditapes_c10686 -1.194 0.879 isoform b /// 0007498 // mesoderm development /// 0008466 // glycogenin glucosyltransferase activity 1.751 1.467 n n n ruditapes_c26802 1.253 0.879 0.776 0.972 n n n ruditapes_c656 -1.35 0.879 retinol binding protein like /// 0048513 // organ development 0.629 0.466 n n n ruditapes_c13567 1.574 0.879 0.177 0.278 n y n ruditapes_c10094 1.649 0.879 mannose c type 2 /// 0005488 // binding 0.143 0.235 n y n ruditapes_c22630 1.799 0.879 proline-serine-threonine phosphatase-interacting protein 1 0.1 0.18 n y n ruditapes2_lrc6059 -1.588 0.879 ribosomal protein s8 /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part 0.283 0.178 n y n ruditapes_lrc34617 -1.588 0.879 gm2 activator protein 0.283 0.178 n y n ruditapes_c13024 -2.224 0.879 0.113 0.051 n y n ruditapes_c11931 -2.224 0.879 0.112 0.051 n y n ruditapes_c31332 -2.224 0.879 0.112 0.051 n y n ruditapes2_c1326 ? 0.879 sparc cwcv and kazal-like domains proteoglycan 1 /// 0007275 // multicellular organismal development /// 0009987 // cellular process 0 0.023 n y n ruditapes2_lrc5116 ? 0.879 lysozyme "/// 0042742 // defense response to bacterium /// 0016798 // hydrolase activity, acting on glycosyl bonds" 0 0.023 n y n ruditapes_c16394 ? 0.879 14-3-3 protein 0 0.023 n y n ruditapes_lrc30054 ? 0.879 methionine sulfoxide reductase b3 /// 0005739 // mitochondrion /// 0016491 // oxidoreductase activity 0 0.023 n y n ruditapes_c26017 -1.061 0.88 16.82 15.846 n n n ruditapes_c2757 -1.07 0.88 12.485 11.663 n n n ruditapes_c22261 -1.093 0.88 7.099 6.495 n n n ruditapes_c13939 1.092 0.88 4.823 5.267 n n n ruditapes_c5671 1.094 0.88 4.691 5.131 n n n ruditapes_c7399 -1.104 0.88 proteasome ( macropain) 26s non- 4 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0043234 // protein complex /// 0044424 // intracellular part 5.632 5.103 n n n ruditapes_c7664 -1.128 0.88 acetylcholinesterase /// 0004091 // carboxylesterase activity 3.756 3.33 n n n ruditapes_c23570 -1.132 0.88 3.509 3.1 n n n ruditapes_c14955 1.169 0.88 1.595 1.864 n n n ruditapes_c9790 -1.18 0.88 1.971 1.67 n n n ruditapes_c10533 1.199 0.88 1.165 1.397 n n n ruditapes_c28877 -1.213 0.88 1.456 1.201 n n n ruditapes_c13995 1.226 0.88 5 -3 exoribonuclease 1 /// 0007126 // meiosis /// 0007569 // cell aging /// 0004518 // nuclease activity /// 0006396 // RNA processing /// 0000723 // telomere maintenance /// 0003676 // nucleic acid binding /// 0005737 // cytoplasm 0.923 1.132 n n n ruditapes_c21819 -1.229 0.88 1.278 1.04 n n n ruditapes_c18180 -1.26 0.88 1.011 0.802 n n n ruditapes_c19205 -1.271 0.88 0.953 0.75 n n n ruditapes_c19583 -1.271 0.88 0.951 0.748 n n n ruditapes_c28917 -1.297 0.88 0.812 0.626 n n n ruditapes_c8271 1.461 0.88 baculoviral iap repeat-containing 5 "/// 0016324 // apical plasma membrane /// 0051087 // chaperone binding /// 0005881 // cytoplasmic microtubule /// 0000775 // chromosome, centromeric region /// 0043027 // caspase inhibitor activity /// 0005814 // centriole /// 0000910 // cytokinesis /// 0000086 // G2/M transition of mitotic cell cycle /// 0042493 // response to drug /// 0050897 // cobalt ion binding /// 0030496 // midbody /// 0005730 // nucleolus /// 0006916 // anti-apoptosis /// 0051384 // response to glucocorticoid stimulus /// 0005876 // spindle microtubule /// 0043234 // protein complex /// 0046982 // protein heterodimerization activity /// 0005829 // cytosol /// 0031577 // spindle checkpoint /// 0045931 // positive regulation of mitotic cell cycle /// 0008270 // zinc ion binding /// 0043524 // negative regulation of neuron apoptosis /// 0008017 // microtubule binding /// 0031503 // protein complex localization /// 0031536 // positive regulation of exit from mitosis /// 0043434 // response to peptide hormone stimulus /// 0051303 // establishment of chromosome localization /// 0000226 // microtubule cytoskeleton organization /// 0048037 // cofactor binding /// 0042803 // protein homodimerization activity /// 0043154 // negative regulation of caspase activity /// 0009790 // embryonic development /// 0031021 // interphase microtubule organizing center" 0.255 0.372 n n n ruditapes_lrc33305 -1.39 0.88 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle 0.515 0.37 n n n ruditapes_lrc23687 1.574 0.88 dynein light chain cytoplasmic "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 0.174 0.274 n y n ruditapes_lrc33851 1.574 0.88 0.174 0.274 n y n ruditapes2_lrc5050 -1.483 0.88 cytochrome c oxidase subunit via polypeptide 1 /// 0016491 // oxidoreductase activity /// 0005743 // mitochondrial inner membrane /// 0008152 // metabolic process 0.373 0.252 n n n ruditapes2_lrc3161 1.649 0.88 ferritin /// 0055114 // oxidation reduction /// 0004322 // ferroxidase activity /// 0006826 // iron ion transport /// 0006879 // cellular iron ion homeostasis /// 0005737 // cytoplasm /// 0008199 // ferric iron binding 0.14 0.23 n y n ruditapes_s39713 1.799 0.88 0.097 0.175 n y n ruditapes_lrc34358 2.248 0.88 wsc domain containing protein 0.047 0.106 n y n ruditapes_c27023 -2.224 0.88 0.111 0.05 n y n ruditapes_c28252 -2.224 0.88 0.111 0.05 n y n ruditapes_c30178 -2.224 0.88 0.111 0.05 n y n ruditapes_c8963 -2.224 0.88 0.11 0.05 n y n ruditapes_lrc39013 -2.224 0.88 0.11 0.05 n y n ruditapes2_c1744 ? 0.88 complement component q subcomponent-like 2 0 0.023 n y n ruditapes2_c3714 ? 0.88 inhibitor of apoptosis protein 0 0.023 n y n ruditapes_c26421 ? 0.88 0 0.023 n y n ruditapes_c28120 ? 0.88 0 0.023 n y n ruditapes_c28950 ? 0.88 0 0.023 n y n ruditapes_c29172 ? 0.88 0 0.023 n y n ruditapes_c32565 ? 0.88 0 0.023 n y n ruditapes_c35767 ? 0.88 chymotrypsin b1 0 0.023 n y n ruditapes2_c2712 1.047 0.881 loc734178 protein /// 0030154 // cell differentiation /// 0051179 // localization /// 0048513 // organ development /// 0030725 // ring canal formation /// 0007611 // learning or memory /// 0045172 // germline ring canal /// 0007293 // germarium-derived egg chamber formation 15.967 16.712 n n n ruditapes2_c264 1.047 0.881 secreted salivary gland /// 0008270 // zinc ion binding /// 0005622 // intracellular 15.607 16.345 n n n ruditapes_c7104 -1.068 0.881 13.177 12.337 n n n ruditapes_c24230 1.094 0.881 4.587 5.017 n n n ruditapes_c4745 -1.112 0.881 4.765 4.286 n n n ruditapes_c11402 1.119 0.881 3-hydroxybutyrate type 1 /// 0005759 // mitochondrial matrix /// 0003858 // 3-hydroxybutyrate dehydrogenase activity /// 0005743 // mitochondrial inner membrane 2.955 3.307 n n n ruditapes2_c1212 1.124 0.881 hydroxysteroid (17-beta) dehydrogenase 4 2.758 3.101 n n n ruditapes_c12658 1.124 0.881 2.739 3.08 n n n ruditapes_c12007 -1.17 0.881 2.127 1.817 n n n ruditapes_c22704 1.18 0.881 transcription factor with ap2 domain 1.382 1.631 n n n ruditapes_c19955 -1.186 0.881 1.819 1.534 n n n ruditapes_c26599 1.207 0.881 mitochondrial ribosomal protein s35 1.081 1.305 n n n ruditapes_c27275 -1.207 0.881 clathrin coat assembly protein ap-1 /// 0016192 // vesicle-mediated transport /// 0044444 // cytoplasmic part 1.509 1.25 n n n ruditapes_c18129 1.226 0.881 solute carrier family 40 (iron-regulated transporter) member 1 /// 0043362 // nucleate erythrocyte maturation /// 0046688 // response to copper ion /// 0006826 // iron ion transport /// 0008021 // synaptic vesicle /// 0035162 // embryonic hemopoiesis /// 0005886 // plasma membrane /// 0016021 // integral to membrane /// 0042541 // hemoglobin biosynthetic process /// 0005381 // iron ion transmembrane transporter activity /// 0010039 // response to iron ion 0.911 1.117 n n n ruditapes_c18673 -1.235 0.881 1.193 0.966 n n n ruditapes_c4140 -1.26 0.881 1 0.794 n n n ruditapes_c11520 -1.308 0.881 0.753 0.576 n n n ruditapes_c13607 1.349 0.881 chymotrypsin-like /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0005615 // extracellular space /// 0007586 // digestion 0.417 0.562 n n n ruditapes_c6633 1.349 0.881 0.415 0.559 n n n ruditapes_c19359 1.349 0.881 tyrosine recombinase 0.411 0.554 n n n ruditapes_c27249 -1.39 0.881 0.513 0.369 n n n ruditapes_lrc33991 -1.415 0.881 0.465 0.329 n n n ruditapes_c15907 -1.415 0.881 0.46 0.325 n n n ruditapes_s39612 1.574 0.881 40s ribosomal protein s5 /// 0006412 // translation /// 0022627 // cytosolic small ribosomal subunit 0.171 0.269 n y n ruditapes_c9562 1.649 0.881 0.137 0.226 n y n ruditapes_c28266 -1.668 0.881 nitrilase member 2 /// 0005739 // mitochondrion 0.228 0.137 n y n ruditapes_s35648 -1.668 0.881 protein /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.228 0.137 n y n ruditapes2_lrc3762 2.248 0.881 0.046 0.103 n y n ruditapes_c27804 -2.224 0.881 0.11 0.049 n y n ruditapes_lrc32542 -2.224 0.881 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0.108 0.049 n y n ruditapes_s39038 -2.224 0.881 0.108 0.049 n y n ruditapes_c11509 ? 0.881 sialic acid-binding lectin 0 0.023 n y n ruditapes_c12133 ? 0.881 peripheral myelin protein 22a 0 0.023 n y n ruditapes_c2500 ? 0.881 0 0.023 n y n ruditapes2_lrc3287 ? 0.881 0 0.022 n y n ruditapes2_lrc4771 ? 0.881 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0.022 n y n ruditapes_lrc35741 ? 0.881 lysozyme /// 0042742 // defense response to bacterium /// 0016787 // hydrolase activity 0 0.022 n y n ruditapes_c15219 1.062 0.882 9.606 10.198 n n n ruditapes_c1367 -1.077 0.882 nadh dehydrogenase fe-s protein 49kda (nadh-coenzyme q reductase) "/// 0006810 // transport /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0051287 // NAD or NADH binding /// 0005747 // mitochondrial respiratory chain complex I /// 0006979 // response to oxidative stress /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0009055 // electron carrier activity /// 0005506 // iron ion binding" 9.977 9.262 n n n ruditapes2_c1085 -1.112 0.882 4.741 4.264 n n n ruditapes2_c6145 -1.122 0.882 3.972 3.54 n n n ruditapes_c28878 1.174 0.882 1.459 1.714 n n n ruditapes2_c2075 -1.177 0.882 coatomer protein subunit zeta 1 /// 0031410 // cytoplasmic vesicle /// 0048193 // Golgi vesicle transport /// 0016020 // membrane /// 0044431 // Golgi apparatus part 1.969 1.672 n n n ruditapes_c7845 1.199 0.882 1.137 1.364 n n n ruditapes_c6207 1.226 0.882 0.899 1.103 n n n ruditapes_c18231 1.349 0.882 0.408 0.55 n n n ruditapes_c27126 -1.39 0.882 0.498 0.358 n n n ruditapes_c8430 1.499 0.882 0.214 0.321 n n n ruditapes_lrc36424 -1.43 0.882 0.432 0.302 n n n ruditapes_s38430 1.574 0.882 mitochondrial ribosomal protein s18a /// 0005622 // intracellular 0.167 0.263 n y n ruditapes_c15664 -1.668 0.882 0.227 0.136 n y n ruditapes_c20061 -1.668 0.882 0.227 0.136 n y n ruditapes_c7311 2.248 0.882 0.045 0.101 n y n ruditapes2_c901 -2.224 0.882 histidine triad nucleotide binding protein 1 /// 0005080 // protein kinase C binding /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0003824 // catalytic activity /// 0007165 // signal transduction 0.107 0.048 n y n ruditapes_c27416 -2.224 0.882 0.106 0.048 n y n ruditapes_c10718 ? 0.882 0 0.022 n y n ruditapes_c267 ? 0.882 0 0.022 n y n ruditapes_c32017 ? 0.882 0 0.022 n y n ruditapes_c32315 ? 0.882 galactoside- soluble isoform cra_a 0 0.022 n y n ruditapes_c4862 ? 0.882 0 0.022 n y n ruditapes2_lrc4854 -1.086 0.883 tyb_aplca ame: full=thymosin beta ame: full=beta-thymosin 7.845 7.222 n n n ruditapes2_c2908 -1.093 0.883 6.67 6.1 n n n ruditapes_c20456 1.165 0.883 1.568 1.827 n n n ruditapes_c11248 -1.17 0.883 2.056 1.757 n n n ruditapes_lrc15434 -1.181 0.883 1.852 1.568 n n n ruditapes_c21439 1.249 0.883 0.734 0.917 n n n ruditapes_s38611 1.349 0.883 transcription initiation factor tfiid subunit 10 0.403 0.543 n n n ruditapes_c12787 1.439 0.883 0.266 0.382 n n n ruditapes_c26775 -1.39 0.883 0.492 0.354 n n n ruditapes2_c4194 -1.415 0.883 0.443 0.313 n n n ruditapes_c2867 -1.43 0.883 mitochondrial ribosomal 0.426 0.298 n n n ruditapes_c30555 -1.439 0.883 0.407 0.283 n n n ruditapes_c21001 -1.668 0.883 0.223 0.133 n y n ruditapes_c28630 -1.668 0.883 0.221 0.133 n y n ruditapes_c11582 -1.668 0.883 cytoglobin /// 0005488 // binding /// 0044464 // cell part 0.221 0.132 n y n ruditapes_c27874 -1.779 0.883 0.179 0.101 n y n ruditapes_lrc34794 -2.224 0.883 heat shock protein 90 0.105 0.047 n y n ruditapes_lrc37163 -2.224 0.883 serine proteases and ovochymase regions /// 0008233 // peptidase activity 0.105 0.047 n y n ruditapes_c32065 -2.224 0.883 large subunit ribosomal protein 6 0.104 0.047 n y n ruditapes2_c3021 ? 0.883 0 0.022 n y n ruditapes_c10502 ? 0.883 0 0.022 n y n ruditapes_c30029 ? 0.883 0 0.022 n y n ruditapes_c30302 ? 0.883 0 0.022 n y n ruditapes_c33193 ? 0.883 0 0.022 n y n ruditapes_c30055 ? 0.883 0 0.021 n y n ruditapes_lrc21272 1.052 0.884 12.416 13.064 n n n ruditapes_c14125 -1.071 0.884 11.444 10.685 n n n ruditapes2_c923 -1.107 0.884 4.984 4.504 n n n ruditapes_c15011 1.116 0.884 methionine aminopeptidase 2 /// 0050897 // cobalt ion binding /// 0006508 // proteolysis /// 0004177 // aminopeptidase activity /// 0008235 // metalloexopeptidase activity 2.966 3.311 n n n ruditapes_c27059 -1.136 0.884 3.12 2.748 n n n ruditapes_c25830 1.132 0.884 2.341 2.65 n n n ruditapes2_c1434 1.138 0.884 2.149 2.446 n n n ruditapes_c18070 -1.148 0.884 2.645 2.304 n n n ruditapes_c26581 -1.17 0.884 methyltransferase type 11 2.044 1.746 n n n ruditapes_c16431 1.178 0.884 1.347 1.586 n n n ruditapes_c14504 -1.179 0.884 1.854 1.572 n n n ruditapes2_c3043 -1.189 0.884 1.679 1.413 n n n ruditapes_c24492 1.226 0.884 0.868 1.065 n n n ruditapes_c12385 1.245 0.884 light-induced brain protein 44 0.745 0.928 n n n ruditapes_c665 -1.243 0.884 transmembrane emp24 domain trafficking protein 2 /// 0006903 // vesicle targeting /// 0005793 // ER-Golgi intermediate compartment /// 0006886 // intracellular protein transport /// 0005515 // protein binding /// 0042589 // zymogen granule membrane /// 0016021 // integral to membrane /// 0005792 // microsome /// 0000139 // Golgi membrane 1.065 0.857 n n n ruditapes_c30977 -1.271 0.884 0.884 0.696 n n n ruditapes_c33569 1.349 0.884 hypothetical protein Strop_1435 [Salinispora tropica CNB-440] 0.395 0.533 n n n ruditapes_c18004 -1.334 0.884 isoform cra_a 0.626 0.469 n n n ruditapes_c19117 -1.359 0.884 predicted protein [Nematostella vectensis] 0.55 0.405 n n n ruditapes_c39561 -1.43 0.884 ferritin /// 0046914 // transition metal ion binding 0.415 0.29 n n n ruditapes_c3135 1.574 0.884 solute carrier family member 38 0.163 0.256 n y n ruditapes_c5402 1.574 0.884 mitochondrial ribosomal protein s14 /// 0044444 // cytoplasmic part /// 0043229 // intracellular organelle 0.163 0.256 n y n ruditapes_c26053 -1.483 0.884 0.346 0.233 n n n ruditapes_c26199 1.799 0.884 0.091 0.163 n y n ruditapes_c26447 -1.668 0.884 0.22 0.132 n y n ruditapes_c7782 -1.668 0.884 0.217 0.13 n y n ruditapes_s6707 -1.668 0.884 thioredoxin domain containing 9 /// 0005515 // protein binding 0.217 0.13 n y n ruditapes_c11576 -2.224 0.884 0.104 0.047 n y n ruditapes_s36026 -2.224 0.884 0.104 0.047 n y n ruditapes_s40207 -2.224 0.884 peptidyl-prolyl cis-trans isomerase /// 0001666 // response to hypoxia 0.104 0.047 n y n ruditapes_s40314 -2.224 0.884 0.104 0.047 n y n ruditapes_c27163 -2.224 0.884 0.103 0.046 n y n ruditapes2_c155 ? 0.884 isoform g 0 0.021 n y n ruditapes2_c214 ? 0.884 0 0.021 n y n ruditapes2_c900 ? 0.884 0 0.021 n y n ruditapes_c16068 ? 0.884 0 0.021 n y n ruditapes_lrc36360 ? 0.884 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity 0 0.021 n y n ruditapes_s40143 ? 0.884 ribosomal protein l4 /// 0030529 // ribonucleoprotein complex /// 0005488 // binding /// 0006412 // translation /// 0005829 // cytosol 0 0.021 n y n ruditapes_c4326 -1.072 0.885 11.091 10.347 n n n ruditapes_c26651 -1.083 0.885 8.111 7.487 n n n ruditapes_c25358 1.082 0.885 5.495 5.946 n n n ruditapes_c27129 -1.104 0.885 5.158 4.673 n n n ruditapes2_c820 -1.112 0.885 4.488 4.036 n n n ruditapes_c27681 -1.112 0.885 kl-2 1-beta dynein heavy chain 4.458 4.01 n n n ruditapes_c25413 -1.125 0.885 3.616 3.215 n n n ruditapes_c5121 -1.128 0.885 coactosin-like 1 3.4 3.013 n n n ruditapes_c7092 -1.154 0.885 2.401 2.08 n n n ruditapes_c16210 -1.189 0.885 chaperonin containing subunit 6a (zeta 1) /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0051082 // unfolded protein binding /// 0006457 // protein folding 1.665 1.401 n n n ruditapes_c11302 -1.205 0.885 jagged protein 1.441 1.196 n n n ruditapes_c15952 -1.205 0.885 mgc107908 protein 1.439 1.195 n n n ruditapes_c4880 1.285 0.885 0.556 0.714 n n n ruditapes_c11022 -1.308 0.885 0.697 0.533 n n n ruditapes_c11419 1.349 0.885 0.386 0.52 n n n ruditapes_c26476 -1.334 0.885 0.612 0.459 n n n ruditapes_c2097 -1.43 0.885 isoform c 0.409 0.286 n n n ruditapes2_c1219 -1.439 0.885 0.392 0.273 n n n ruditapes_c10719 1.574 0.885 0.16 0.252 n y n ruditapes_c13517 1.574 0.885 0.16 0.252 n y n ruditapes_c13526 -1.483 0.885 germ cell-specific gene 2 /// 0005524 // ATP binding /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0004674 // protein serine/threonine kinase activity /// 0007049 // cell cycle /// 0007243 // protein kinase cascade 0.345 0.233 n n n ruditapes_c19525 -1.483 0.885 0.344 0.232 n n n ruditapes_c21501 -2.224 0.885 0.102 0.046 n y n ruditapes_c22699 -2.224 0.885 0.102 0.046 n y n ruditapes_c26128 -2.224 0.885 0.102 0.046 n y n ruditapes_lrc16052 -2.224 0.885 0.102 0.046 n y n ruditapes_s38643 -2.224 0.885 0.102 0.046 n y n ruditapes_c15237 -2.224 0.885 0.101 0.046 n y n ruditapes_c27424 -2.224 0.885 0.101 0.046 n y n ruditapes2_c2314 ? 0.885 tpa: sco-spondin precursor 0 0.021 n y n ruditapes2_c257 ? 0.885 0 0.021 n y n ruditapes2_lrc6376 ? 0.885 0 0.021 n y n ruditapes_c12254 ? 0.885 c-type lectin superfamily member g 0 0.021 n y n ruditapes_c16843 ? 0.885 0 0.021 n y n ruditapes_lrc34087 ? 0.885 chymotrypsinogen 2 0 0.021 n y n ruditapes_lrc35973 ? 0.885 cd209 molecule 0 0.021 n y n ruditapes_c5116 -1.061 0.886 15.249 14.366 n n n ruditapes_lrc11492 -1.112 0.886 4.417 3.972 n n n ruditapes_c21663 1.124 0.886 2.522 2.835 n n n ruditapes2_lrc4747 -1.133 0.886 3.131 2.764 n n n ruditapes_c14490 -1.136 0.886 3.023 2.662 n n n ruditapes_lrc32942 -1.153 0.886 ribosomal protein l8 /// 0030529 // ribonucleoprotein complex /// 0006412 // translation /// 0005829 // cytosol 2.402 2.083 n n n ruditapes2_c654 1.149 0.886 ganglioside gm2 activator precursor 1.795 2.063 n n n ruditapes_c21712 -1.159 0.886 2.221 1.916 n n n ruditapes_c16633 -1.16 0.886 nucleoporin 62kda /// 0008285 // negative regulation of cell proliferation /// 0030159 // receptor signaling complex scaffold activity /// 0043066 // negative regulation of apoptosis /// 0006810 // transport /// 0033036 // macromolecule localization /// 0031965 // nuclear membrane /// 0005487 // nucleocytoplasmic transporter activity /// 0009755 // hormone-mediated signaling /// 0005730 // nucleolus /// 0005643 // nuclear pore /// 0046966 // thyroid hormone receptor binding /// 0043130 // ubiquitin binding /// 0004674 // protein serine/threonine kinase activity /// 0045742 // positive regulation of epidermal growth factor receptor signaling pathway /// 0030528 // transcription regulator activity /// 0042169 // SH2 domain binding /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005813 // centrosome /// 0003682 // chromatin binding /// 0031074 // nucleocytoplasmic shuttling complex /// 0045941 // positive regulation of transcription 2.205 1.901 n n n ruditapes_c31083 -1.167 0.886 2.021 1.731 n n n ruditapes_c8504 -1.19 0.886 asialoglycoprotein receptor 2 /// 0065007 // biological regulation /// 0005515 // protein binding /// 0009987 // cellular process /// 0004872 // receptor activity 1.612 1.354 n n n ruditapes_c14899 -1.209 0.886 proteasome ( macropain) 26s atpase 2 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005737 // cytoplasm 1.358 1.124 n n n ruditapes_c8704 1.249 0.886 0.7 0.875 n n n ruditapes_c22097 1.274 0.886 0.587 0.748 n n n ruditapes2_lrc5384 1.293 0.886 countin-like protein 0.522 0.675 n n n ruditapes_c14744 -1.271 0.886 0.85 0.669 n n n ruditapes2_lrc3543 -1.291 0.886 s-crystallin sl11 (major lens polypeptide) /// 0005515 // protein binding 0.758 0.587 n n n ruditapes_c11164 1.349 0.886 0.38 0.512 n n n ruditapes2_lrc4454 -1.368 0.886 cytochrome c oxidase subunit viic 0.508 0.371 n n n ruditapes_c5569 1.461 0.886 epdr1 protein 0.228 0.334 n n n ruditapes_c10069 1.499 0.886 GJ22832 [Drosophila virilis] 0.201 0.301 n n n ruditapes_c22999 1.574 0.886 0.157 0.246 n y n ruditapes_c24866 1.574 0.886 0.157 0.246 n y n ruditapes_c11625 1.799 0.886 0.089 0.16 n y n ruditapes_lrc36486 1.799 0.886 predicted protein [Nematostella vectensis] 0.088 0.159 n y n ruditapes2_lrc5711 -1.588 0.886 serine proteinase 0.25 0.157 n y n ruditapes_c13052 2.248 0.886 0.043 0.096 n y n ruditapes2_c5198 -2.224 0.886 mitochondrial ribosomal protein s18a /// 0005622 // intracellular 0.101 0.045 n y n ruditapes_lrc34751 -2.224 0.886 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 0.101 0.045 n y n ruditapes_c10388 -2.224 0.886 0.1 0.045 n y n ruditapes_c27839 -2.224 0.886 0.1 0.045 n y n ruditapes_c28479 -2.224 0.886 malic enzyme nad(+)- mitochondrial "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors" 0.1 0.045 n y n ruditapes_c28865 -2.224 0.886 0.099 0.045 n y n ruditapes_c29442 -2.224 0.886 0.099 0.045 n y n ruditapes2_c3738 ? 0.886 0 0.021 n y n ruditapes_c1272 ? 0.886 hemocyte kazal-type proteinase inhibitor 0 0.021 n y n ruditapes_c7755 1.064 0.887 8.241 8.77 n n n ruditapes2_c2927 -1.084 0.887 7.846 7.241 n n n ruditapes_c16415 -1.121 0.887 3.682 3.284 n n n ruditapes_c10955 1.114 0.887 dna-directed dna polymerase epsilon 4 /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0005515 // protein binding /// 0003887 // DNA-directed DNA polymerase activity 2.933 3.267 n n n ruditapes_c10757 -1.134 0.887 3.031 2.673 n n n ruditapes_c23593 1.154 0.887 1.683 1.942 n n n ruditapes_c17130 -1.174 0.887 regucalcin /// 0065007 // biological regulation 1.859 1.584 n n n ruditapes_lrc21544 1.176 0.887 1.315 1.547 n n n ruditapes_c15033 1.188 0.887 1.157 1.375 n n n ruditapes_c3575 1.199 0.887 1.042 1.249 n n n ruditapes_c28258 -1.197 0.887 1.483 1.239 n n n ruditapes_s40283 -1.197 0.887 1.475 1.232 n n n ruditapes_c13428 1.214 0.887 0.909 1.103 n n n ruditapes_c31860 1.229 0.887 0.799 0.982 n n n ruditapes_lrc32165 -1.26 0.887 galactoside- 8 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.905 0.719 n n n ruditapes_c17747 1.285 0.887 0.538 0.691 n n n ruditapes_c25003 -1.308 0.887 0.678 0.518 n n n ruditapes_lrc35774 -1.308 0.887 calcium binding protein 1 0.676 0.517 n n n ruditapes2_c699 1.424 0.887 inhibitor of apoptosis protein 1 /// 0005488 // binding 0.264 0.376 n n n ruditapes_c11079 -1.368 0.887 0.506 0.37 n n n ruditapes_c27344 -1.368 0.887 0.499 0.365 n n n ruditapes2_c735 -1.39 0.887 zygote arrest 1 0.463 0.333 n n n ruditapes_c20429 -1.415 0.887 yip1 domain member 5 /// 0044464 // cell part 0.418 0.295 n n n ruditapes_c20866 -1.483 0.887 0.331 0.223 n n n ruditapes_c22703 -1.483 0.887 0.331 0.223 n n n ruditapes_c28564 -1.483 0.887 epidermal retinal dehydrogenase 2 /// 0055114 // oxidation reduction /// 0005488 // binding /// 0016491 // oxidoreductase activity 0.327 0.221 n n n ruditapes_c18386 1.799 0.887 0.087 0.157 n y n ruditapes_c26288 1.799 0.887 0.086 0.155 n y n ruditapes_c10402 -1.668 0.887 0.205 0.123 n y n ruditapes_c27167 -2.224 0.887 0.099 0.044 n y n ruditapes_lrc28182 -2.224 0.887 0.099 0.044 n y n ruditapes_c15123 -2.224 0.887 0.098 0.044 n y n ruditapes_c27708 -2.224 0.887 0.098 0.044 n y n ruditapes_c4785 -2.224 0.887 0.098 0.044 n y n ruditapes2_lrc2202 ? 0.887 0 0.02 n y n ruditapes2_lrc3618 ? 0.887 0 0.02 n y n ruditapes_c15257 ? 0.887 0 0.02 n y n ruditapes_c30793 ? 0.887 0 0.02 n y n ruditapes_lrc27421 ? 0.887 0 0.02 n y n ruditapes_lrc32301 ? 0.887 angiopoietin-like 2 /// 0005576 // extracellular region 0 0.02 n y n ruditapes_c17417 -1.067 0.888 12.243 11.475 n n n ruditapes2_c2552 -1.074 0.888 9.672 9.002 n n n ruditapes_c8175 1.072 0.888 6.569 7.042 n n n ruditapes_c13151 1.089 0.888 4.554 4.958 n n n ruditapes_lrc29311 1.102 0.888 3.535 3.894 n n n ruditapes_c9871 -1.112 0.888 4.214 3.79 n n n ruditapes2_c3131 -1.127 0.888 sub1 homolog ( cerevisiae) /// 0006357 // regulation of transcription from RNA polymerase II promoter /// 0003713 // transcription coactivator activity /// 0005730 // nucleolus /// 0005667 // transcription factor complex /// 0003697 // single-stranded DNA binding 3.297 2.926 n n n ruditapes_lrc38501 -1.129 0.888 cofilin 1 (non-muscle) 3.184 2.819 n n n ruditapes_c21970 1.124 0.888 isopentenyl pyrophosphate:dimethyllallyl pyrophosphate partial 2.454 2.759 n n n ruditapes2_c2340 -1.138 0.888 2.809 2.469 n n n ruditapes_c15642 -1.169 0.888 sarcoplasmic calcium-binding protein 1.929 1.651 n n n ruditapes_c29249 1.187 0.888 1.147 1.362 n n n ruditapes_c12507 1.237 0.888 endonuclease-reverse transcriptase 0.751 0.928 n n n ruditapes_c12872 -1.245 0.888 0.98 0.787 n n n ruditapes_c12343 -1.271 0.888 0.829 0.653 n n n ruditapes2_lrc5903 1.424 0.888 glutathione s-transferase 0.256 0.364 n n n ruditapes2_c1384 1.574 0.888 0.152 0.239 n y n ruditapes_c14214 1.799 0.888 churchill domain containing 1 "/// 0042661 // regulation of mesodermal cell fate specification /// 0006355 // regulation of transcription, DNA-dependent /// 0030334 // regulation of cell migration /// 0046872 // metal ion binding /// 0045941 // positive regulation of transcription /// 0042074 // cell migration involved in gastrulation" 0.085 0.153 n y n ruditapes_c27860 1.799 0.888 0.085 0.153 n y n ruditapes_c9447 1.799 0.888 0.085 0.153 n y n ruditapes_c13432 1.799 0.888 0.085 0.152 n y n ruditapes_c24125 -1.668 0.888 0.201 0.121 n y n ruditapes_lrc19016 2.248 0.888 0.041 0.092 n y n ruditapes2_c5527 -2.224 0.888 0.097 0.043 n y n ruditapes2_lrc4513 -2.224 0.888 lethal neo18 /// 0005739 // mitochondrion 0.096 0.043 n y n ruditapes_c29819 -2.224 0.888 0.096 0.043 n y n ruditapes_c5227 -2.224 0.888 0.096 0.043 n y n ruditapes_s37091 -2.224 0.888 0.096 0.043 n y n ruditapes_s37447 -2.224 0.888 expressed hypothetical protein [Trichoplax adhaerens] 0.096 0.043 n y n ruditapes2_c2240 ? 0.888 haaf_limpo ame: full=hemagglutinin amebocyte aggregation factor ame: full=18k-laf flags: precursor 0 0.02 n y n ruditapes2_c358 ? 0.888 0 0.02 n y n ruditapes_c3568 ? 0.888 0 0.02 n y n ruditapes_c3570 ? 0.888 vitelline membrane outer layer 1 homolog 0 0.02 n y n ruditapes_c7477 ? 0.888 0 0.02 n y n ruditapes_c4399 1.049 0.889 12.887 13.514 n n n ruditapes2_lrc3818 -1.062 0.889 14.284 13.452 n n n ruditapes_c14892 1.071 0.889 6.631 7.101 n n n ruditapes_c23712 -1.103 0.889 4.954 4.491 n n n ruditapes_c8822 -1.123 0.889 3.456 3.077 n n n ruditapes_c28728 -1.124 0.889 3.407 3.032 n n n ruditapes_c13466 1.124 0.889 2.401 2.699 n n n ruditapes_c17891 1.14 0.889 isoform b /// 0007275 // multicellular organismal development /// 0015031 // protein transport /// 0005737 // cytoplasm /// 0008536 // Ran GTPase binding 1.931 2.202 n n n ruditapes_c13645 1.149 0.889 1.713 1.968 n n n ruditapes_c22441 -1.158 0.889 2.126 1.835 n n n ruditapes_c29033 1.18 0.889 1.196 1.412 n n n ruditapes_lrc12666 -1.186 0.889 1.573 1.327 n n n ruditapes2_c769 1.217 0.889 0.86 1.047 n n n ruditapes_c6058 1.237 0.889 0.727 0.899 n n n ruditapes_lrc9712 -1.243 0.889 0.978 0.787 n n n ruditapes_c20427 -1.39 0.889 0.446 0.321 n n n ruditapes_lrc32725 1.461 0.889 0.218 0.318 n n n ruditapes_c6398 -1.483 0.889 "secreted protein, putative [Ixodes scapularis]" 0.32 0.216 n n n ruditapes_lrc34119 -1.483 0.889 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 0.319 0.215 n n n ruditapes_c25187 -1.483 0.889 0.318 0.215 n n n ruditapes_c501 -1.483 0.889 0.318 0.215 n n n ruditapes_c19443 1.649 0.889 baculoviral iap repeat-containing 2 /// 0014070 // response to organic cyclic substance /// 0007166 // cell surface receptor linked signal transduction /// 0001890 // placenta development /// 0001741 // XY body /// 0045471 // response to ethanol /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity /// 0051591 // response to cAMP /// 0010243 // response to organic nitrogen 0.118 0.195 n y n ruditapes_c20303 1.799 0.889 angiopoietin-like 6 0.084 0.152 n y n ruditapes_c8010 1.799 0.889 0.084 0.15 n y n ruditapes_c6640 -1.73 0.889 0.177 0.102 n y n ruditapes_c27682 -2.224 0.889 0.095 0.043 n y n ruditapes_lrc39170 -2.224 0.889 0.095 0.043 n y n ruditapes_s38785 -2.224 0.889 0.095 0.043 n y n ruditapes_lrc22737 -2.224 0.889 0.094 0.042 n y n ruditapes_c19303 ? 0.889 0 0.02 n y n ruditapes_c6931 ? 0.889 sialic acid-binding lectin 0 0.02 n y n ruditapes2_c5138 -1.032 0.89 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 64.832 62.841 n n n ruditapes_c29549 -1.051 0.89 21.782 20.734 n n n ruditapes_c5541 1.07 0.89 6.673 7.14 n n n ruditapes_c29974 -1.133 0.89 2.887 2.548 n n n ruditapes_c22189 1.13 0.89 2.147 2.426 n n n ruditapes_c29053 -1.152 0.89 2.27 1.971 n n n ruditapes_lrc21698 -1.155 0.89 2.189 1.896 n n n ruditapes_c29839 -1.165 0.89 1.935 1.661 n n n ruditapes_c32374 1.178 0.89 chondroitin sulfate proteoglycan 3 /// 0032501 // multicellular organismal process /// 0009987 // cellular process 1.22 1.437 n n n ruditapes_c16913 -1.197 0.89 1.406 1.174 n n n ruditapes_c24481 1.199 0.89 0.979 1.174 n n n ruditapes2_lrc5028 -1.229 0.89 1.07 0.87 n n n ruditapes2_c2815 -1.271 0.89 0.803 0.632 n n n ruditapes_c8584 1.499 0.89 0.186 0.28 n n n ruditapes_lrc38408 1.574 0.89 cysteine-rich protein 1 0.146 0.229 n y n ruditapes_c14199 -1.483 0.89 0.316 0.213 n n n ruditapes_c13107 -1.483 0.89 0.314 0.212 n n n ruditapes_c6253 -1.483 0.89 0.314 0.212 n n n ruditapes_c24635 1.799 0.89 0.083 0.149 n y n ruditapes_lrc39937 1.799 0.89 ependymin related protein-1 precursor 0.083 0.149 n y n ruditapes_c10513 1.799 0.89 salivary secreted protein 0.082 0.148 n y n ruditapes_c19265 1.799 0.89 0.082 0.147 n y n ruditapes_c23658 1.799 0.89 0.082 0.147 n y n ruditapes_c20450 1.799 0.89 0.081 0.146 n y n ruditapes_c37533 1.799 0.89 stanniocalcin-like protein 0.081 0.146 n y n ruditapes_lrc36402 -1.668 0.89 glutathione s-transferase 0.197 0.118 n y n ruditapes_c26414 -2.224 0.89 0.093 0.042 n y n ruditapes_lrc35706 -2.224 0.89 0.092 0.041 n y n ruditapes2_c1601 ? 0.89 0 0.019 n y n ruditapes2_c1968 ? 0.89 0 0.019 n y n ruditapes_c21280 ? 0.89 0 0.019 n y n ruditapes_lrc32249 ? 0.89 0 0.019 n y n ruditapes_lrc13797 -1.04 0.891 cathepsin l 36.491 35.094 n n n ruditapes_c27962 1.034 0.891 23.106 23.885 n n n ruditapes2_c2358 -1.049 0.891 23.092 22.02 n n n ruditapes2_c2380 1.039 0.891 18.095 18.801 n n n ruditapes_c10369 1.042 0.891 15.77 16.44 n n n ruditapes_lrc33799 -1.084 0.891 mitochondrial atp synthase coupling factor 6 /// 0015992 // proton transport /// 0003824 // catalytic activity /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0015078 // hydrogen ion transmembrane transporter activity 7.11 6.556 n n n ruditapes_c12159 -1.086 0.891 6.749 6.213 n n n ruditapes_lrc36490 1.095 0.891 3.802 4.163 n n n ruditapes_c30596 1.108 0.891 2.978 3.299 n n n ruditapes_c13775 -1.12 0.891 mitochondrial ribosomal protein l4 /// 0030529 // ribonucleoprotein complex /// 0002119 // nematode larval development /// 0044444 // cytoplasmic part /// 0040010 // positive regulation of growth rate /// 0000003 // reproduction /// 0005515 // protein binding /// 0043229 // intracellular organelle /// 0040011 // locomotion /// 0009792 // embryonic development ending in birth or egg hatching 3.517 3.141 n n n ruditapes2_c1241 -1.13 0.891 ribosomal protein l6 "/// 0006355 // regulation of transcription, DNA-dependent /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003677 // DNA binding /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome" 3.045 2.696 n n n ruditapes_c9376 -1.131 0.891 2.942 2.602 n n n ruditapes_lrc14682 1.133 0.891 2.036 2.307 n n n ruditapes_c15129 -1.14 0.891 2.586 2.269 n n n ruditapes_c23616 -1.14 0.891 2.574 2.257 n n n ruditapes2_c2809 1.142 0.891 von willebrand factor type egf and pentraxin domain containing 1 1.81 2.066 n n n ruditapes_c13157 1.147 0.891 1.689 1.937 n n n ruditapes_c29010 1.162 0.891 1.425 1.655 n n n ruditapes_c10057 1.18 0.891 glutathione transferase omega-1 1.157 1.365 n n n ruditapes_c27511 -1.191 0.891 1.46 1.226 n n n ruditapes2_c1938 -1.223 0.891 lysozyme 2 1.09 0.891 n n n ruditapes2_c2572 1.237 0.891 0.71 0.878 n n n ruditapes_c15073 1.237 0.891 0.707 0.874 n n n ruditapes2_lrc6056 -1.287 0.891 unnamed protein product [Tetraodon nigroviridis] 0.705 0.548 n n n ruditapes_c27585 -1.308 0.891 0.628 0.48 n n n ruditapes_c12116 1.349 0.891 0.346 0.466 n n n ruditapes_c12513 1.349 0.891 0.346 0.466 n n n ruditapes2_c795 -1.314 0.891 keratinocyte associated protein 2 /// 0018279 // protein amino acid N-linked glycosylation via asparagine /// 0008250 // oligosaccharyltransferase complex /// 0004579 // dolichyl-diphosphooligosaccharide-protein glycotransferase activity 0.606 0.461 n n n ruditapes2_lrc5605 -1.334 0.891 ubiquinol-cytochrome c reductase-like protein /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 0.545 0.409 n n n ruditapes_c22299 -1.39 0.891 0.429 0.309 n n n ruditapes_c17527 1.574 0.891 0.144 0.226 n y n ruditapes_lrc24497 1.574 0.891 0.143 0.226 n y n ruditapes_lrc34771 1.574 0.891 hypothetical protein [Paramecium tetraurelia strain d4-2] 0.143 0.224 n y n ruditapes_s40025 1.799 0.891 s-crystallin sl11 (major lens polypeptide) /// 0005515 // protein binding 0.08 0.144 n y n ruditapes_c25839 -2.224 0.891 0.092 0.041 n y n ruditapes_c5200 -2.224 0.891 asialoglycoprotein receptor 2 /// 0016020 // membrane /// 0050789 // regulation of biological process /// 0005515 // protein binding /// 0009987 // cellular process /// 0004872 // receptor activity 0.091 0.041 n y n ruditapes_c7103 -2.224 0.891 0.091 0.041 n y n ruditapes_lrc17119 -2.224 0.891 0.091 0.041 n y n ruditapes_s39824 -2.224 0.891 0.091 0.041 n y n ruditapes_c24430 -2.224 0.891 0.09 0.041 n y n ruditapes_c23140 ? 0.891 ecto-adp-ribosyltransferase 5 precursor 0 0.019 n y n ruditapes_c29848 ? 0.891 tpa: sco-spondin precursor 0 0.019 n y n ruditapes_lrc32225 1.091 0.892 4.041 4.408 n n n ruditapes_c27624 -1.112 0.892 3.946 3.549 n n n ruditapes_c2779 -1.121 0.892 cytoplasmic actin /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm 3.352 2.99 n n n ruditapes_c27728 1.119 0.892 2.423 2.712 n n n ruditapes_c25351 1.134 0.892 accessory gland protein 1.978 2.243 n n n ruditapes_c10808 -1.145 0.892 2.401 2.098 n n n ruditapes_c17327 1.188 0.892 1.053 1.251 n n n ruditapes_c18159 1.214 0.892 0.827 1.004 n n n ruditapes_c7164 1.293 0.892 0.471 0.609 n n n ruditapes_c23673 -1.271 0.892 0.773 0.608 n n n ruditapes2_c5981 1.349 0.892 porin precursor 0.343 0.463 n n n ruditapes_c1277 -1.314 0.892 tpa_inf: variable region-containing chitin-binding protein 5 /// 0008152 // metabolic process /// 0016787 // hydrolase activity 0.599 0.455 n n n ruditapes2_c2699 -1.334 0.892 0.538 0.403 n n n ruditapes_lrc37210 -1.39 0.892 sialic acid binding lectin 0.423 0.305 n n n ruditapes_c17719 1.461 0.892 ankyrin repeat-containing 0.207 0.303 n n n ruditapes_c22995 -1.39 0.892 0.42 0.302 n n n ruditapes_c19001 -1.39 0.892 tena thi-4 family 0.419 0.301 n n n ruditapes_c28119 -1.483 0.892 cathepsin l /// 0008233 // peptidase activity 0.303 0.204 n n n ruditapes_c12205 1.799 0.892 0.08 0.143 n y n ruditapes_c14713 1.799 0.892 0.08 0.143 n y n ruditapes2_c1396 1.799 0.892 0.079 0.143 n y n ruditapes_c12681 1.799 0.892 0.079 0.143 n y n ruditapes_c20707 1.799 0.892 0.079 0.143 n y n ruditapes_s37356 1.799 0.892 f-type h+-transporting atpase subunit f 0.079 0.143 n y n ruditapes_c7432 1.799 0.892 0.079 0.142 n y n ruditapes_s34797 -2.224 0.892 mitochondrial atpase 0.09 0.04 n y n ruditapes2_lrc6951 -2.224 0.892 calmodulin /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0046872 // metal ion binding /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0000922 // spindle pole /// 0043169 // cation binding /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0017022 // myosin binding /// 0032465 // regulation of cytokinesis 0.089 0.04 n y n ruditapes_c9594 -2.224 0.892 0.089 0.04 n y n ruditapes_c16568 ? 0.892 0 0.019 n y n ruditapes2_c7 ? 0.892 0 0.018 n y n ruditapes2_lrc3307 ? 0.892 caveolin 1 /// 0030299 // intestinal cholesterol absorption /// 0016020 // membrane /// 0001756 // somitogenesis /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0048884 // neuromast development 0 0.018 n y n ruditapes_lrc29280 ? 0.892 mgc64417 protein /// 0016787 // hydrolase activity 0 0.018 n y n ruditapes_c17411 -1.067 0.893 11.256 10.552 n n n ruditapes_c7042 1.075 0.893 fmrfamide precursor 5.596 6.013 n n n ruditapes_c7275 -1.086 0.893 6.512 5.997 n n n ruditapes_c28523 1.09 0.893 4.037 4.399 n n n ruditapes_c24050 -1.125 0.893 3.11 2.763 n n n ruditapes_c20278 -1.162 0.893 1.897 1.632 n n n ruditapes_c12996 -1.18 0.893 #NAME? 1.558 1.32 n n n ruditapes_c26564 1.183 0.893 cysteine proteinase- isoform c /// 0032502 // developmental process 1.078 1.276 n n n ruditapes_lrc16152 -1.205 0.893 1.246 1.035 n n n ruditapes_c23095 1.214 0.893 0.818 0.993 n n n ruditapes_lrc13232 -1.245 0.893 0.901 0.723 n n n ruditapes_c4285 -1.26 0.893 protein kinase c inhibitor aswz variant 5 /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0.812 0.644 n n n ruditapes_c22070 -1.271 0.893 0.757 0.596 n n n ruditapes_c21758 1.349 0.893 0.336 0.453 n n n ruditapes_lrc33043 -1.334 0.893 0.532 0.399 n n n ruditapes_c13684 -1.334 0.893 0.528 0.396 n n n ruditapes_c7029 1.424 0.893 0.233 0.332 n n n ruditapes_lrc35905 -1.39 0.893 nadh dehydrogenase iron-sulfur protein 5 0.412 0.297 n n n ruditapes_c9959 1.799 0.893 0.078 0.14 n y n ruditapes_c24357 1.799 0.893 endonuclease-reverse transcriptase 0.077 0.139 n y n ruditapes_c29498 1.799 0.893 hemocyte protein-glutamine gamma- "/// 0044425 // membrane part /// 0016746 // transferase activity, transferring acyl groups /// 0030154 // cell differentiation /// 0005488 // binding" 0.077 0.139 n y n ruditapes_s37704 1.799 0.893 0.077 0.139 n y n ruditapes_c7541 -1.668 0.893 0.187 0.112 n y n ruditapes_c15637 -1.668 0.893 0.185 0.111 n y n ruditapes_c26399 -1.668 0.893 0.184 0.11 n y n ruditapes_c20049 -2.224 0.893 0.088 0.04 n y n ruditapes_lrc34072 -2.224 0.893 developmentally-regulated vdg3 0.088 0.04 n y n ruditapes2_c359 -2.224 0.893 0.088 0.039 n y n ruditapes2_c418 ? 0.893 0 0.018 n y n ruditapes_c8071 ? 0.893 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0.018 n y n ruditapes_lrc35319 ? 0.893 inhibitor of apoptosis protein 0 0.018 n y n ruditapes_c8224 -1.032 0.894 60.577 58.722 n n n ruditapes_c9722 -1.056 0.894 15.991 15.146 n n n ruditapes_c7934 1.046 0.894 12.852 13.447 n n n ruditapes_c30608 -1.061 0.894 13.53 12.756 n n n ruditapes_c21064 1.063 0.894 7.466 7.936 n n n ruditapes_c26223 1.069 0.894 6.323 6.758 n n n ruditapes2_c1375 1.108 0.894 2.796 3.099 n n n ruditapes_c27348 -1.126 0.894 2.968 2.635 n n n ruditapes_c18709 1.134 0.894 1.885 2.137 n n n ruditapes_c14985 -1.153 0.894 2.07 1.796 n n n ruditapes_c5143 -1.165 0.894 placenta-specific 8 1.821 1.563 n n n ruditapes_c29355 1.188 0.894 1.013 1.204 n n n ruditapes_c2812 -1.189 0.894 1.414 1.189 n n n ruditapes2_lrc3275 -1.197 0.894 1.301 1.087 n n n ruditapes_c8954 -1.213 0.894 1.122 0.925 n n n ruditapes_c31257 -1.251 0.894 0.846 0.676 n n n ruditapes_c28780 -1.251 0.894 0.84 0.671 n n n ruditapes_c8337 -1.257 0.894 0.808 0.643 n n n ruditapes_c13313 -1.334 0.894 0.515 0.386 n n n ruditapes_lrc35014 1.499 0.894 von willebrand factor c domain containing 2 0.173 0.259 n n n ruditapes_c12420 1.799 0.894 notch1 isoform 1 /// 0005488 // binding /// 0050793 // regulation of developmental process /// 0048513 // organ development /// 0048468 // cell development /// 0050794 // regulation of cellular process 0.077 0.138 n y n ruditapes_c19843 1.799 0.894 0.076 0.137 n y n ruditapes_lrc36249 1.799 0.894 0.076 0.137 n y n ruditapes_c30999 -1.668 0.894 0.181 0.109 n y n ruditapes2_c2349 -2.224 0.894 solute carrier family 1 (neuronal epithelial high affinity glutamate system xag) member 1 /// 0005624 // membrane fraction /// 0051260 // protein homooligomerization /// 0007268 // synaptic transmission /// 0005515 // protein binding /// 0015501 // glutamate:sodium symporter activity /// 0016595 // glutamate binding /// 0015813 // L-glutamate transport /// 0005887 // integral to plasma membrane 0.087 0.039 n y n ruditapes2_c5132 -2.224 0.894 placenta-specificprotein 8 protein (c15 protein) 0.087 0.039 n y n ruditapes_c22561 -2.224 0.894 0.087 0.039 n y n ruditapes_c36807 -2.224 0.894 0.087 0.039 n y n ruditapes_s35245 -2.224 0.894 0.087 0.039 n y n ruditapes_lrc36496 -2.224 0.894 ubiquinol-cytochrome c reductase hinge protein 0.086 0.039 n y n ruditapes2_c3282 -2.224 0.894 hypothetical protein C09D4.2 [Caenorhabditis elegans] 0.086 0.038 n y n ruditapes_s37687 -1.074 0.895 ribosomal protein s16 "/// 0005811 // lipid particle /// 0006414 // translational elongation /// 0040007 // growth /// 0002119 // nematode larval development /// 0000003 // reproduction /// 0005515 // protein binding /// 0042274 // ribosomal small subunit biogenesis /// 0000022 // mitotic spindle elongation /// 0006364 // rRNA processing /// 0018996 // molting cycle, collagen and cuticulin-based cuticle /// 0003723 // RNA binding /// 0022627 // cytosolic small ribosomal subunit /// 0009792 // embryonic development ending in birth or egg hatching" 8.754 8.154 n n n ruditapes_c4056 1.076 0.895 thioester-containing protein /// 0005576 // extracellular region /// 0005488 // binding 5.297 5.698 n n n ruditapes_c11719 -1.112 0.895 3.722 3.348 n n n ruditapes_c13439 -1.112 0.895 3.705 3.332 n n n ruditapes_c11072 -1.146 0.895 adp-ribosyl cyclase precursor 2.244 1.959 n n n ruditapes2_c1025 1.162 0.895 1.309 1.521 n n n ruditapes_lrc33907 1.169 0.895 1.202 1.406 n n n ruditapes_c16612 -1.174 0.895 1.616 1.377 n n n ruditapes_lrc34097 -1.186 0.895 1.405 1.185 n n n ruditapes_c3380 1.267 0.895 lysozyme 0.527 0.668 n n n ruditapes_c20534 1.274 0.895 0.5 0.637 n n n ruditapes_c27941 -1.271 0.895 0.72 0.567 n n n ruditapes_c13720 -1.271 0.895 chromosome 1 open reading frame 161 0.719 0.566 n n n ruditapes_c6744 1.349 0.895 0.322 0.435 n n n ruditapes_lrc36967 1.349 0.895 glutathione s-transferase /// 0005515 // protein binding 0.322 0.435 n n n ruditapes_c28651 1.349 0.895 0.321 0.433 n n n ruditapes_c7298 1.349 0.895 0.32 0.431 n n n ruditapes_c30233 -1.334 0.895 0.511 0.383 n n n ruditapes_c15431 1.461 0.895 0.194 0.283 n n n ruditapes_c31644 -1.483 0.895 0.284 0.191 n n n ruditapes_c12380 1.799 0.895 0.075 0.135 n y n ruditapes_c16148 1.799 0.895 0.075 0.134 n y n ruditapes2_c793 -1.668 0.895 0.18 0.108 n y n ruditapes_c17691 -1.668 0.895 0.179 0.108 n y n ruditapes2_c4576 -2.224 0.895 c16orf14 homolog 0.085 0.038 n y n ruditapes_c15770 -2.224 0.895 col protein 0.085 0.038 n y n ruditapes_c18561 -2.224 0.895 0.085 0.038 n y n ruditapes_c21533 -2.224 0.895 0.085 0.038 n y n ruditapes_lrc37201 -2.224 0.895 acyl carrier /// 0006633 // fatty acid biosynthetic process /// 0006810 // transport /// 0022900 // electron transport chain /// 0000036 // acyl carrier activity /// 0005747 // mitochondrial respiratory chain complex I /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 0.085 0.038 n y n ruditapes_s39672 -2.224 0.895 calmodulin /// 0005488 // binding /// 0044424 // intracellular part 0.085 0.038 n y n ruditapes_c9746 -2.224 0.895 0.084 0.038 n y n ruditapes2_c3027 ? 0.895 vitelline membrane outer layer protein 1 homolog precursor 0 0.018 n y n ruditapes_c7281 ? 0.895 0 0.018 n y n ruditapes_c480 -1.031 0.896 59.77 57.947 n n n ruditapes_c24685 -1.047 0.896 22.47 21.459 n n n ruditapes_c7961 -1.071 0.896 9.198 8.588 n n n ruditapes2_lrc4510 -1.099 0.896 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 4.642 4.222 n n n ruditapes_c10876 1.099 0.896 3.152 3.465 n n n ruditapes_c15796 -1.112 0.896 3.627 3.262 n n n ruditapes_c9053 1.124 0.896 x-box binding protein 2.086 2.345 n n n ruditapes2_lrc6044 -1.15 0.896 calponin-like protein 2.064 1.795 n n n ruditapes_lrc33476 -1.155 0.896 taf10 rna polymerase ii /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.946 1.686 n n n ruditapes_c18122 -1.17 0.896 xylose isomerase /// 0005975 // carbohydrate metabolic process 1.634 1.396 n n n ruditapes_c18320 -1.17 0.896 1.632 1.394 n n n ruditapes_c12315 1.169 0.896 neuroligin 4* 1.179 1.378 n n n ruditapes_c21088 1.211 0.896 0.794 0.961 n n n ruditapes2_lrc3147 -1.251 0.896 developmentally-regulated vdg3 0.808 0.646 n n n ruditapes_c9786 1.274 0.896 0.494 0.629 n n n ruditapes_c3736 1.274 0.896 aldose 1-epimerase /// 0005975 // carbohydrate metabolic process /// 0004034 // aldose 1-epimerase activity 0.488 0.621 n n n ruditapes2_lrc3958 -1.271 0.896 cystatin c 0.713 0.561 n n n ruditapes_c5967 -1.297 0.896 0.607 0.468 n n n ruditapes_lrc36900 -1.308 0.896 ribosomal protein s8 /// 0005622 // intracellular 0.574 0.439 n n n ruditapes_c29231 1.349 0.896 0.318 0.429 n n n ruditapes_c23118 -1.334 0.896 0.498 0.373 n n n ruditapes_c28278 -1.334 0.896 0.496 0.372 n n n ruditapes2_lrc6018 -1.368 0.896 protein 0.425 0.311 n n n ruditapes_c19020 -1.39 0.896 amp-dependent synthetase and ligase /// 0048046 // apoplast /// 0009507 // chloroplast /// 0046686 // response to cadmium ion 0.392 0.282 n n n ruditapes_c13131 -1.39 0.896 0.388 0.279 n n n ruditapes_c21921 -1.39 0.896 0.388 0.279 n n n ruditapes2_lrc3761 -1.415 0.896 serine proteinase 0.355 0.251 n n n ruditapes_c15308 1.799 0.896 graal protein 0.074 0.132 n y n ruditapes_lrc34612 1.799 0.896 signal transduction protein with efhand domain 0.074 0.132 n y n ruditapes2_lrc5923 -2.224 0.896 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.084 0.038 n y n ruditapes_lrc33307 -2.224 0.896 0.084 0.038 n y n ruditapes_lrc35069 -2.224 0.896 tyrosine kinase partial 0.084 0.038 n y n ruditapes_c12053 -2.224 0.896 0.083 0.037 n y n ruditapes_c19046 -2.224 0.896 0.083 0.037 n y n ruditapes_c22117 -2.224 0.896 down syndrome cell adhesion partial 0.083 0.037 n y n ruditapes_c9761 -2.224 0.896 0.083 0.037 n y n ruditapes_lrc25980 -2.224 0.896 0.083 0.037 n y n ruditapes_lrc38431 -2.224 0.896 0.083 0.037 n y n ruditapes2_c3320 -2.224 0.896 yd repeat protein 0.082 0.037 n y n ruditapes_c10447 -2.224 0.896 nicotinic acetylcholine receptor alpha 9-ii subunit 0.082 0.037 n y n ruditapes_s37340 -2.224 0.896 0.082 0.037 n y n ruditapes_lrc25800 1.008 0.897 ubiquitin b /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0005829 // cytosol /// 0045941 // positive regulation of transcription 146.336 147.565 n n n ruditapes2_c1574 -1.053 0.897 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 16.691 15.846 n n n ruditapes2_c1080 -1.07 0.897 9.362 8.75 n n n ruditapes_c16481 -1.087 0.897 5.963 5.485 n n n ruditapes_c8200 -1.112 0.897 cg11044 cg11044-pa 3.581 3.221 n n n ruditapes2_lrc4829 1.105 0.897 2.836 3.133 n n n ruditapes2_c1036 1.108 0.897 complement component q subcomponent binding protein /// 0005739 // mitochondrion 2.669 2.956 n n n ruditapes_c23061 1.11 0.897 2.546 2.827 n n n ruditapes_c8602 -1.122 0.897 cd63 antigen /// 0044446 // intracellular organelle part /// 0005886 // plasma membrane /// 0031090 // organelle membrane /// 0005764 // lysosome /// 0005770 // late endosome 3.028 2.698 n n n ruditapes_c20584 -1.16 0.897 1.801 1.552 n n n ruditapes_c27924 -1.162 0.897 1.764 1.518 n n n ruditapes2_lrc6064 1.169 0.897 calponin homolog 1.175 1.373 n n n ruditapes_c16160 -1.186 0.897 trove domain member 2 /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0005515 // protein binding /// 0003723 // RNA binding /// 0006383 // transcription from RNA polymerase III promoter 1.368 1.153 n n n ruditapes_c9482 -1.186 0.897 sirtuin 2 /// 0044238 // primary metabolic process /// 0050789 // regulation of biological process /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0034960 // cellular biopolymer metabolic process 1.364 1.15 n n n ruditapes_c19672 -1.189 0.897 universal stress protein /// 0006950 // response to stress 1.328 1.117 n n n ruditapes_c31847 -1.205 0.897 1.154 0.958 n n n ruditapes_c23152 -1.213 0.897 1.065 0.878 n n n ruditapes2_c2502 1.249 0.897 0.572 0.715 n n n ruditapes_c26559 1.249 0.897 0.57 0.711 n n n ruditapes_c24339 -1.271 0.897 allograft inflammatory factor 1 0.693 0.545 n n n ruditapes_lrc39538 1.349 0.897 0.307 0.414 n n n ruditapes_c19128 -1.334 0.897 0.491 0.368 n n n ruditapes_c19401 -1.334 0.897 zgc:162025 protein 0.486 0.365 n n n ruditapes_s38426 -1.334 0.897 0.485 0.364 n n n ruditapes2_lrc3736 -1.368 0.897 galactose soluble 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0.421 0.308 n n n ruditapes_c28654 1.574 0.897 0.128 0.201 n y n ruditapes_lrc16370 -1.483 0.897 0.275 0.186 n n n ruditapes_lrc37420 1.799 0.897 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 0.071 0.128 n y n ruditapes_c11732 -2.224 0.897 0.082 0.037 n y n ruditapes_c23681 -2.224 0.897 0.082 0.037 n y n ruditapes_c27204 -2.224 0.897 0.082 0.037 n y n ruditapes_c4759 -2.224 0.897 mitochondrial ribosomal protein l17 /// 0005622 // intracellular 0.082 0.037 n y n ruditapes_c9288 -2.224 0.897 0.082 0.037 n y n ruditapes_s35735 -2.224 0.897 0.082 0.037 n y n ruditapes_s38561 -2.224 0.897 0.082 0.037 n y n ruditapes_s39879 -2.224 0.897 fk506-binding protein /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0009092 // homoserine metabolic process /// 0005527 // macrolide binding /// 0006412 // translation /// 0005829 // cytosol /// 0006325 // chromatin organization /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.082 0.037 n y n ruditapes_c12571 -2.224 0.897 rab gtpase binding effector protein 1 0.081 0.037 n y n ruditapes_c15009 -2.224 0.897 0.081 0.037 n y n ruditapes_c27 -2.224 0.897 0.081 0.037 n y n ruditapes_s40220 -2.224 0.897 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0.081 0.037 n y n ruditapes_s40274 -2.224 0.897 0.081 0.037 n y n ruditapes_c12074 -2.224 0.897 0.081 0.036 n y n ruditapes_c12189 -2.224 0.897 0.081 0.036 n y n ruditapes_c18047 -2.224 0.897 0.081 0.036 n y n ruditapes_c19555 -2.224 0.897 0.081 0.036 n y n ruditapes_c19636 -2.224 0.897 0.081 0.036 n y n ruditapes_c39792 -2.224 0.897 0.081 0.036 n y n ruditapes_c9728 -2.224 0.897 0.081 0.036 n y n ruditapes_lrc35977 -2.224 0.897 0.081 0.036 n y n ruditapes_lrc39131 -2.224 0.897 0.081 0.036 n y n ruditapes_lrc40229 -2.224 0.897 translocon-associated protein gamma /// 0005811 // lipid particle /// 0030176 // integral to endoplasmic reticulum membrane /// 0006613 // cotranslational protein targeting to membrane /// 0005784 // translocon complex 0.081 0.036 n y n ruditapes_c9707 ? 0.897 sialic acid-binding lectin 0 0.017 n y n ruditapes_c22870 1.07 0.898 5.732 6.136 n n n ruditapes2_c2336 -1.083 0.898 protein disulfide isomerase-associated 3 precursor /// 0003824 // catalytic activity 6.403 5.914 n n n ruditapes_c8494 1.1 0.898 2.99 3.289 n n n ruditapes_c3844 -1.124 0.898 vacuolar atp synthase subunit e "/// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0033178 // proton-transporting two-sector ATPase complex, catalytic domain" 2.883 2.564 n n n ruditapes_c12399 1.124 0.898 2.014 2.265 n n n ruditapes_c24282 1.124 0.898 2.006 2.255 n n n ruditapes_c16889 1.143 0.898 1.563 1.786 n n n ruditapes_c4885 1.176 0.898 1.063 1.25 n n n ruditapes_lrc35857 1.176 0.898 taf10 rna polymerase tata box binding protein -associated factor /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity 1.059 1.245 n n n ruditapes_c10711 -1.223 0.898 0.97 0.793 n n n ruditapes_c8373 -1.223 0.898 0.963 0.787 n n n ruditapes_c21416 1.237 0.898 0.614 0.759 n n n ruditapes_c21834 1.259 0.898 0.524 0.66 n n n ruditapes_c6022 1.259 0.898 0.52 0.654 n n n ruditapes_c4852 -1.271 0.898 0.686 0.54 n n n ruditapes_c1754 1.299 0.898 0.398 0.517 n n n ruditapes_c25041 1.349 0.898 0.306 0.413 n n n ruditapes_s35968 1.349 0.898 0.305 0.412 n n n ruditapes_c17772 1.349 0.898 0.305 0.411 n n n ruditapes_c22129 1.349 0.898 0.304 0.411 n n n ruditapes_c25521 1.349 0.898 0.304 0.41 n n n ruditapes_lrc33801 1.349 0.898 40s ribosomal protein s10 /// 0005840 // ribosome 0.303 0.409 n n n ruditapes_c29689 1.349 0.898 0.301 0.406 n n n ruditapes_c15200 -1.334 0.898 0.478 0.359 n n n ruditapes_c20905 -1.334 0.898 GE26269 [Drosophila yakuba] 0.477 0.358 n n n ruditapes_c30256 1.461 0.898 loc733380 protein 0.183 0.267 n n n ruditapes2_lrc6172 -1.483 0.898 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.266 0.18 n n n ruditapes_c25575 -1.668 0.898 0.17 0.102 n y n ruditapes_c7921 -1.668 0.898 0.167 0.1 n y n ruditapes_c12241 -2.224 0.898 0.08 0.036 n y n ruditapes_c12740 -2.224 0.898 0.08 0.036 n y n ruditapes_c18113 -2.224 0.898 predicted protein [Nematostella vectensis] 0.08 0.036 n y n ruditapes_c19073 -2.224 0.898 0.08 0.036 n y n ruditapes_c19478 -2.224 0.898 0.08 0.036 n y n ruditapes_c22279 -2.224 0.898 0.08 0.036 n y n ruditapes_c23962 -2.224 0.898 0.08 0.036 n y n ruditapes_c25753 -2.224 0.898 0.08 0.036 n y n ruditapes_c26026 -2.224 0.898 0.08 0.036 n y n ruditapes_c35674 -2.224 0.898 0.08 0.036 n y n ruditapes_lrc26356 -2.224 0.898 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 0.08 0.036 n y n ruditapes_lrc37279 -2.224 0.898 galectin 3 0.08 0.036 n y n ruditapes_lrc39042 -2.224 0.898 ca2+ sensor 0.08 0.036 n y n ruditapes_s39903 -2.224 0.898 0.08 0.036 n y n ruditapes_c18671 -2.224 0.898 0.079 0.036 n y n ruditapes_c19339 -2.224 0.898 0.079 0.036 n y n ruditapes_c20992 -2.224 0.898 0.079 0.036 n y n ruditapes_c677 1.054 0.899 9.082 9.568 n n n ruditapes_c23234 -1.072 0.899 PREDICTED: hypothetical protein [Homo sapiens] 8.594 8.019 n n n ruditapes_c16340 1.064 0.899 6.663 7.088 n n n ruditapes_c25897 1.094 0.899 zinc finger protein 235 (zinc finger protein 93 homolog) (zfp-93) (zinc finger protein 6) 3.315 3.625 n n n ruditapes_c1531 -1.112 0.899 non-pou domain octamer-binding /// 0005488 // binding /// 0010467 // gene expression /// 0016070 // RNA metabolic process 3.436 3.09 n n n ruditapes_c28916 1.109 0.899 2.501 2.774 n n n ruditapes_c146 1.118 0.899 2.18 2.437 n n n ruditapes_c21205 -1.128 0.899 2.634 2.334 n n n ruditapes_c26936 -1.145 0.899 pms1 postmeiotic segregation increased 1 ( cerevisiae) 2.091 1.827 n n n ruditapes_c17609 -1.156 0.899 1.82 1.574 n n n ruditapes2_lrc3173 -1.159 0.899 1.758 1.517 n n n ruditapes_c19053 -1.174 0.899 bromodomain adjacent to zinc finger 1b /// 0003700 // transcription factor activity /// 0005721 // centromeric heterochromatin /// 0006350 // transcription /// 0005634 // nucleus /// 0005515 // protein binding /// 0000793 // condensed chromosome /// 0006333 // chromatin assembly or disassembly /// 0008270 // zinc ion binding /// 0006338 // chromatin remodeling 1.484 1.264 n n n ruditapes_c15414 -1.181 0.899 heat shock 70kda protein 12a 1.381 1.169 n n n ruditapes_c5658 -1.191 0.899 1.24 1.041 n n n ruditapes_c16733 -1.197 0.899 eukaryotic translation initiation factor 4e-binding protein 2 /// 0031333 // negative regulation of protein complex assembly /// 0045947 // negative regulation of translational initiation /// 0030371 // translation repressor activity /// 0003743 // translation initiation factor activity /// 0005829 // cytosol /// 0008286 // insulin receptor signaling pathway /// 0008190 // eukaryotic initiation factor 4E binding 1.177 0.983 n n n ruditapes_c29458 -1.213 0.899 1.014 0.836 n n n ruditapes2_c1508 -1.235 0.899 0.864 0.699 n n n ruditapes_lrc20722 -1.271 0.899 0.668 0.526 n n n ruditapes_c14027 -1.297 0.899 sulfide quinone reductase-like /// 0005743 // mitochondrial inner membrane 0.572 0.441 n n n ruditapes_c26571 1.349 0.899 pyridoxine biosynthesis protein 0.298 0.402 n n n ruditapes_c17453 1.349 0.899 0.295 0.398 n n n ruditapes_c4314 1.349 0.899 cytochrome b /// 0006810 // transport /// 0016491 // oxidoreductase activity /// 0016021 // integral to membrane /// 0005743 // mitochondrial inner membrane /// 0009055 // electron carrier activity /// 0005506 // iron ion binding /// 0022904 // respiratory electron transport chain 0.294 0.397 n n n ruditapes_lrc34656 -1.483 0.899 calcium binding protein 2 0.261 0.176 n n n ruditapes_lrc33990 1.799 0.899 0.069 0.124 n y n ruditapes2_c4038 -1.668 0.899 ependymin related protein-1 0.165 0.099 n y n ruditapes2_c3550 -1.668 0.899 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0.164 0.098 n y n ruditapes_c14148 -2.224 0.899 0.079 0.035 n y n ruditapes_c18639 -2.224 0.899 0.079 0.035 n y n ruditapes_c20496 -2.224 0.899 0.079 0.035 n y n ruditapes_c25097 -2.224 0.899 0.079 0.035 n y n ruditapes_lrc35257 -2.224 0.899 nucleoside diphosphate kinase /// 0048471 // perinuclear region of cytoplasm /// 0030819 // positive regulation of cAMP biosynthetic process /// 0009201 // ribonucleoside triphosphate biosynthetic process /// 0005515 // protein binding /// 0000166 // nucleotide binding /// 0005882 // intermediate filament /// 0002762 // negative regulation of myeloid leukocyte differentiation /// 0042995 // cell projection /// 0031252 // cell leading edge /// 0004550 // nucleoside diphosphate kinase activity /// 0006165 // nucleoside diphosphate phosphorylation 0.079 0.035 n y n ruditapes_c17661 -2.224 0.899 0.078 0.035 n y n ruditapes_c7910 -2.224 0.899 macrosialin precursor 0.078 0.035 n y n ruditapes_lrc19708 -2.224 0.899 0.078 0.035 n y n ruditapes_lrc38021 -2.224 0.899 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0.078 0.035 n y n ruditapes_lrc38488 -2.224 0.899 0.078 0.035 n y n ruditapes_s37553 -2.224 0.899 glutathione s-transferase 0.078 0.035 n y n ruditapes_c783 ? 0.899 0 0.016 n y n ruditapes_lrc6894 ? 0.899 lysozyme /// 0042742 // defense response to bacterium /// 0016787 // hydrolase activity 0 0.016 n y n ruditapes_c22784 -1.056 0.9 14.276 13.519 n n n ruditapes_s38570 -1.064 0.9 10.594 9.957 n n n ruditapes_c3335 1.091 0.9 3.41 3.721 n n n ruditapes_c20117 1.101 0.9 2.816 3.1 n n n ruditapes_c25027 -1.112 0.9 3.409 3.066 n n n ruditapes_c14043 -1.112 0.9 3.381 3.041 n n n ruditapes_c27513 -1.123 0.9 2.787 2.482 n n n ruditapes_s38521 1.116 0.9 2.202 2.459 n n n ruditapes_c16900 1.119 0.9 2.131 2.384 n n n ruditapes_c19602 1.131 0.9 1.746 1.974 n n n ruditapes2_c3675 1.151 0.9 hematopoietic stem progenitor cells /// 0048471 // perinuclear region of cytoplasm /// 0046872 // metal ion binding /// 0005783 // endoplasmic reticulum /// 0051536 // iron-sulfur cluster binding 1.341 1.544 n n n ruditapes_c18009 -1.177 0.9 1.397 1.187 n n n ruditapes_s39492 -1.181 0.9 translationally controlled tumor protein 1.353 1.145 n n n ruditapes_c20383 -1.181 0.9 1.339 1.133 n n n ruditapes_c12778 1.186 0.9 pyrimidine-nucleoside phosphorylase "/// 0016757 // transferase activity, transferring glycosyl groups" 0.923 1.094 n n n ruditapes2_c2814 -1.205 0.9 1.087 0.903 n n n ruditapes_c22253 -1.207 0.9 1.05 0.87 n n n ruditapes_c11851 -1.245 0.9 0.783 0.628 n n n ruditapes_c19725 -1.251 0.9 0.757 0.605 n n n ruditapes_c18333 -1.251 0.9 nucleolar complex associated 4 homolog ( cerevisiae) /// 0044464 // cell part 0.752 0.601 n n n ruditapes_c23812 -1.251 0.9 0.749 0.599 n n n ruditapes_c23629 -1.297 0.9 0.564 0.435 n n n ruditapes_c28692 -1.308 0.9 0.53 0.405 n n n ruditapes_lrc30767 1.349 0.9 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0005739 // mitochondrion /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006228 // UTP biosynthetic process 0.293 0.396 n n n ruditapes2_c5150 1.349 0.9 protein 0.292 0.394 n n n ruditapes_c9241 1.439 0.9 0.193 0.278 n n n ruditapes_s38057 -1.483 0.9 0.258 0.174 n n n ruditapes_lrc33933 1.799 0.9 multiple egf-like-domains 6 0.067 0.121 n y n ruditapes_lrc39547 -1.668 0.9 0.162 0.097 n y n ruditapes_c17278 -2.224 0.9 0.077 0.035 n y n ruditapes_c18762 -2.224 0.9 0.077 0.035 n y n ruditapes_c20583 -2.224 0.9 0.077 0.035 n y n ruditapes_c23519 -2.224 0.9 0.077 0.035 n y n ruditapes_c24281 -2.224 0.9 0.077 0.035 n y n ruditapes_c9964 -2.224 0.9 0.077 0.035 n y n ruditapes_s37441 -2.224 0.9 0.077 0.035 n y n ruditapes_c15634 -2.224 0.9 0.077 0.034 n y n ruditapes_c17981 -2.224 0.9 0.077 0.034 n y n ruditapes_c19395 -2.224 0.9 0.077 0.034 n y n ruditapes_lrc36874 -2.224 0.9 0.077 0.034 n y n ruditapes_c11216 -2.224 0.9 0.076 0.034 n y n ruditapes_c17826 -2.224 0.9 0.076 0.034 n y n ruditapes_c18212 -2.224 0.9 ras-related protein ric2 /// 0032555 // purine ribonucleotide binding /// 0051179 // localization /// 0016023 // cytoplasmic membrane-bounded vesicle /// 0050794 // regulation of cellular process 0.076 0.034 n y n ruditapes_c3186 -2.224 0.9 max dimerization protein 1 /// 0005739 // mitochondrion /// 0005488 // binding /// 0030528 // transcription regulator activity /// 0009987 // cellular process 0.076 0.034 n y n ruditapes_c6907 -2.224 0.9 0.076 0.034 n y n ruditapes_c9852 -2.224 0.9 0.076 0.034 n y n ruditapes_lrc36265 -2.224 0.9 nadh dehydrogenase 1 beta 8kda 0.076 0.034 n y n ruditapes2_c4532 1.008 0.901 tubulin alpha-1 chain "/// 0005524 // ATP binding /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0016021 // integral to membrane /// 0005874 // microtubule /// 0042626 // ATPase activity, coupled to transmembrane movement of substances /// 0007018 // microtubule-based movement" 133.452 134.571 n n n ruditapes2_c4497 1.021 0.901 small subunit ribosomal protein 27 /// 0005622 // intracellular 41.164 42.016 n n n ruditapes_c11462 -1.096 0.901 epididymal secretory protein e1 precursor /// 0006869 // lipid transport /// 0044424 // intracellular part 4.501 4.105 n n n ruditapes2_c379 -1.103 0.901 a kinase anchor protein 14 /// 0019904 // protein domain specific binding /// 0019901 // protein kinase binding 3.871 3.509 n n n ruditapes2_lrc4005 1.124 0.901 1.915 2.153 n n n ruditapes_c27470 1.134 0.901 mitogen-activated protein kinase associated protein 1 1.667 1.891 n n n ruditapes_c19613 -1.14 0.901 2.137 1.873 n n n ruditapes_c18074 1.145 0.901 1.45 1.659 n n n ruditapes_c22446 1.152 0.901 1.32 1.521 n n n ruditapes_c23076 1.176 0.901 1.009 1.187 n n n ruditapes_c25946 1.186 0.901 chromosome 10 open reading frame 65 protein /// 0003824 // catalytic activity 0.907 1.076 n n n ruditapes_c12063 -1.205 0.901 urease accessory protein ureg "/// 0005524 // ATP binding /// 0016788 // hydrolase activity, acting on ester bonds /// 0016151 // nickel ion binding /// 0006260 // DNA replication" 1.056 0.877 n n n ruditapes_c24536 1.221 0.901 0.658 0.803 n n n ruditapes_c25955 1.237 0.901 0.581 0.719 n n n ruditapes2_c1456 -1.235 0.901 0.83 0.672 n n n ruditapes_c19075 -1.251 0.901 0.734 0.587 n n n ruditapes_c9729 -1.271 0.901 0.647 0.509 n n n ruditapes_c12791 -1.271 0.901 cdgsh iron sulfur domain 2 /// 0044425 // membrane part /// 0046914 // transition metal ion binding /// 0048471 // perinuclear region of cytoplasm /// 0044446 // intracellular organelle part /// 0043234 // protein complex /// 0031090 // organelle membrane /// 0005783 // endoplasmic reticulum /// 0051536 // iron-sulfur cluster binding 0.643 0.506 n n n ruditapes_c3659 -1.287 0.901 0.588 0.456 n n n ruditapes_c17401 -1.297 0.901 0.547 0.421 n n n ruditapes_lrc39463 -1.39 0.901 lethal 06225 /// 0016020 // membrane /// 0044424 // intracellular part 0.351 0.252 n n n ruditapes_lrc39555 -1.483 0.901 0.253 0.171 n n n ruditapes_c31730 -1.483 0.901 0.251 0.17 n n n ruditapes2_lrc2077 1.799 0.901 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 0.066 0.118 n y n ruditapes_c17370 -2.224 0.901 0.076 0.034 n y n ruditapes_c3182 -2.224 0.901 0.076 0.034 n y n ruditapes_lrc29596 -2.224 0.901 0.076 0.034 n y n ruditapes_lrc35983 -2.224 0.901 macrophage migration inhibitory factor 2 0.076 0.034 n y n ruditapes_lrc38175 -2.224 0.901 0.076 0.034 n y n ruditapes_c18457 -2.224 0.901 0.075 0.034 n y n ruditapes_c3508 -2.224 0.901 0.075 0.034 n y n ruditapes_c9717 -2.224 0.901 0.075 0.034 n y n ruditapes_c9721 -2.224 0.901 0.075 0.034 n y n ruditapes_lrc26113 -2.224 0.901 ribosomal protein s15 /// 0030529 // ribonucleoprotein complex /// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0000003 // reproduction /// 0008340 // determination of adult lifespan /// 0009792 // embryonic development ending in birth or egg hatching 0.075 0.034 n y n ruditapes_lrc33767 -2.224 0.901 0.075 0.034 n y n ruditapes_c18852 1.062 0.902 6.528 6.935 n n n ruditapes_c26535 -1.09 0.902 5.055 4.637 n n n ruditapes_c12837 1.104 0.902 2.583 2.851 n n n ruditapes_lrc37974 1.114 0.902 2.213 2.464 n n n ruditapes2_c2695 -1.156 0.902 1.684 1.457 n n n ruditapes2_c6519 -1.17 0.902 rbx1 protein /// 0019941 // modification-dependent protein catabolic process /// 0005634 // nucleus /// 0005515 // protein binding /// 0006281 // DNA repair /// 0005829 // cytosol /// 0008270 // zinc ion binding /// 0016874 // ligase activity 1.434 1.225 n n n ruditapes_c15402 1.183 0.902 0.912 1.079 n n n ruditapes_c12354 1.186 0.902 0.886 1.051 n n n ruditapes2_c2905 1.237 0.902 dbh-like 1 /// 0044238 // primary metabolic process /// 0005488 // binding /// 0016020 // membrane /// 0016491 // oxidoreductase activity /// 0009987 // cellular process 0.566 0.7 n n n ruditapes_c17878 1.259 0.902 0.481 0.605 n n n ruditapes_c19557 -1.251 0.902 1700123o20rik protein 0.724 0.578 n n n ruditapes_c1244 1.299 0.902 serine threonine-protein partial 0.368 0.478 n n n ruditapes_c20240 -1.297 0.902 0.543 0.419 n n n ruditapes_c12405 -1.334 0.902 0.444 0.333 n n n ruditapes_c10425 -1.39 0.902 0.347 0.249 n n n ruditapes_c10345 -1.39 0.902 choline dehydrogenase /// 0050660 // FAD binding /// 0055114 // oxidation reduction /// 0050237 // pyridoxine 4-oxidase activity /// 0008812 // choline dehydrogenase activity /// 0006066 // alcohol metabolic process /// 0019285 // glycine betaine biosynthetic process from choline 0.344 0.247 n n n ruditapes_c31405 -1.483 0.902 0.249 0.168 n n n ruditapes_c14940 1.799 0.902 c type lectin receptor c 0.065 0.116 n y n ruditapes_c5311 -1.668 0.902 mitochondrial cytochrome c oxidase subunit 5a 0.155 0.093 n y n ruditapes_c10457 -2.224 0.902 0.074 0.033 n y n ruditapes_c14100 -2.224 0.902 toll receptor 0.073 0.033 n y n ruditapes_c17636 -2.224 0.902 0.073 0.033 n y n ruditapes_c28462 -2.224 0.902 0.073 0.033 n y n ruditapes_c7128 -2.224 0.902 0.073 0.033 n y n ruditapes2_c1479 ? 0.902 complement component q subcomponent-like 2 0 0.015 n y n ruditapes_c22830 1.036 0.903 16.684 17.28 n n n ruditapes_c10238 1.07 0.903 5.219 5.583 n n n ruditapes_c29562 -1.096 0.903 4.371 3.989 n n n ruditapes2_c5982 -1.098 0.903 4.077 3.712 n n n ruditapes_lrc38141 1.095 0.903 2.991 3.277 n n n ruditapes_c12757 -1.112 0.903 3.169 2.851 n n n ruditapes_c23893 1.109 0.903 2.31 2.563 n n n ruditapes2_c2308 1.111 0.903 enoyl coenzyme a hydratase peroxisomal /// 0006091 // generation of precursor metabolites and energy /// 0005739 // mitochondrion /// 0006635 // fatty acid beta-oxidation /// 0005515 // protein binding /// 0004300 // enoyl-CoA hydratase activity /// 0005777 // peroxisome 2.229 2.477 n n n ruditapes_c29443 1.112 0.903 2.218 2.467 n n n ruditapes_lrc11263 -1.128 0.903 2.479 2.198 n n n ruditapes2_lrc7501 -1.136 0.903 tandem repeat galectin 2.186 1.925 n n n ruditapes_c7210 -1.148 0.903 huntingtin interacting protein k 1.868 1.627 n n n ruditapes_c10996 -1.165 0.903 1.523 1.307 n n n ruditapes_c10727 1.169 0.903 chloride intracellular channel 1.025 1.199 n n n ruditapes_c21061 1.176 0.903 0.966 1.136 n n n ruditapes_c26061 -1.181 0.903 1.254 1.061 n n n ruditapes_c18504 -1.197 0.903 1.093 0.913 n n n ruditapes_c8997 1.221 0.903 0.633 0.773 n n n ruditapes_c23895 1.237 0.903 0.558 0.69 n n n ruditapes2_c1937 -1.235 0.903 0.792 0.641 n n n ruditapes2_c1595 -1.235 0.903 lpa-prov partial /// 0030194 // positive regulation of blood coagulation /// 0051209 // release of sequestered calcium ion into cytosol /// 0005576 // extracellular region /// 0007166 // cell surface receptor linked signal transduction /// 0042730 // fibrinolysis /// 0032967 // positive regulation of collagen biosynthetic process /// 0005886 // plasma membrane /// 0032502 // developmental process /// 0070053 // thrombospondin receptor activity /// 0004252 // serine-type endopeptidase activity /// 0005102 // receptor binding 0.787 0.637 n n n ruditapes_c8171 -1.235 0.903 0.786 0.636 n n n ruditapes_c10254 -1.251 0.903 0.704 0.563 n n n ruditapes_c20497 -1.251 0.903 0.704 0.563 n n n ruditapes_c28056 -1.257 0.903 protein phosphatase regulatory subunit b epsilon isoform /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding 0.676 0.538 n n n ruditapes2_c826 -1.26 0.903 peptidoglycan-recognition protein s2 0.657 0.522 n n n ruditapes_c7377 -1.297 0.903 0.529 0.408 n n n ruditapes_c580 -1.318 0.903 baculoviral iap repeat-containing 4 0.473 0.359 n n n ruditapes_lrc33331 -2.224 0.903 osteoblast specific factor 0.072 0.033 n y n ruditapes_lrc33873 -2.224 0.903 ca2+ sensor 0.072 0.033 n y n ruditapes_c12056 -2.224 0.903 0.072 0.032 n y n ruditapes_c15517 -2.224 0.903 0.072 0.032 n y n ruditapes_c17193 -2.224 0.903 0.072 0.032 n y n ruditapes_c8794 -2.224 0.903 0.072 0.032 n y n ruditapes2_c1119 ? 0.903 sialic acid-binding lectin 0 0.015 n y n ruditapes_c5307 -1.059 0.904 actin 5c /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0007605 // sensory perception of sound /// 0005856 // cytoskeleton /// 0042802 // identical protein binding /// 0035267 // NuA4 histone acetyltransferase complex /// 0005625 // soluble fraction /// 0050998 // nitric-oxide synthase binding /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0006928 // cell motion 11.474 10.831 n n n ruditapes2_c1441 -1.094 0.904 4.419 4.041 n n n ruditapes_c29358 -1.095 0.904 4.261 3.89 n n n ruditapes2_c1718 1.101 0.904 ependymin related protein-1 precursor 2.617 2.881 n n n ruditapes2_c3983 1.151 0.904 glutathione peroxidase 3 1.257 1.447 n n n ruditapes_c30661 1.156 0.904 1.176 1.36 n n n ruditapes_c21624 1.199 0.904 0.747 0.896 n n n ruditapes_c3658 -1.205 0.904 0.997 0.828 n n n ruditapes_c7693 -1.219 0.904 isoform cra_b /// 0005739 // mitochondrion /// 0005730 // nucleolus 0.883 0.724 n n n ruditapes_c8429 -1.223 0.904 0.847 0.693 n n n ruditapes_lrc28178 -1.235 0.904 0.767 0.621 n n n ruditapes_c21778 -1.297 0.904 0.52 0.401 n n n ruditapes_lrc33236 -1.297 0.904 ubiquinol-cytochrome c complex iii subunit vii 0.518 0.4 n n n ruditapes_c10315 -1.297 0.904 acyl-coenzyme a very long chain /// 0050660 // FAD binding /// 0006635 // fatty acid beta-oxidation /// 0004466 // long-chain-acyl-CoA dehydrogenase activity /// 0015980 // energy derivation by oxidation of organic compounds /// 0016020 // membrane /// 0042645 // mitochondrial nucleoid /// 0009055 // electron carrier activity 0.512 0.395 n n n ruditapes_lrc38363 1.349 0.904 0.271 0.365 n n n ruditapes_lrc34582 1.349 0.904 atp synthase beta subunit "/// 0005524 // ATP binding /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0046933 // hydrogen ion transporting ATP synthase activity, rotational mechanism /// 0015986 // ATP synthesis coupled proton transport /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 0.269 0.363 n n n ruditapes_c14691 -1.334 0.904 0.427 0.32 n n n ruditapes_c23479 -1.334 0.904 0.425 0.318 n n n ruditapes_c1090 -1.43 0.904 pe-pgrs family protein 0.282 0.197 n n n ruditapes_c1892 1.574 0.904 isoform b 0.109 0.172 n y n ruditapes_c23194 1.799 0.904 0.063 0.113 n y n ruditapes_lrc33815 1.799 0.904 transforming growth beta- 68kda 0.063 0.113 n y n ruditapes_c28482 1.799 0.904 hypothetical protein BRAFLDRAFT_74506 [Branchiostoma floridae] 0.062 0.112 n y n ruditapes2_c351 -2.224 0.904 0.071 0.032 n y n ruditapes2_c4031 -2.224 0.904 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0.071 0.032 n y n ruditapes_c14397 -2.224 0.904 0.071 0.032 n y n ruditapes_c8851 -2.224 0.904 0.071 0.032 n y n ruditapes_lrc33072 -2.224 0.904 signal transduction protein with efhand domain 0.07 0.032 n y n ruditapes_c736 1.018 0.905 48.055 48.904 n n n ruditapes2_c1224 -1.031 0.905 49.041 47.545 n n n ruditapes_lrc32669 -1.066 0.905 8.903 8.349 n n n ruditapes2_c1062 1.087 0.905 calponin-like protein 3.349 3.64 n n n ruditapes_lrc34912 1.112 0.905 2.111 2.347 n n n ruditapes_lrc39602 -1.135 0.905 2.145 1.89 n n n ruditapes_c21899 -1.167 0.905 1.429 1.225 n n n ruditapes_c10325 1.199 0.905 0.733 0.879 n n n ruditapes_c5156 -1.205 0.905 0.981 0.815 n n n ruditapes_c10012 1.211 0.905 0.668 0.809 n n n ruditapes_c20255 1.221 0.905 hypothetical protein BRAFLDRAFT_120924 [Branchiostoma floridae] 0.603 0.736 n n n ruditapes_s35212 -1.235 0.905 0.759 0.615 n n n ruditapes2_lrc5928 -1.235 0.905 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.755 0.611 n n n ruditapes_c19506 -1.251 0.905 0.682 0.545 n n n ruditapes_c3839 -1.271 0.905 glutathione s-transferase mu /// 0016740 // transferase activity 0.592 0.466 n n n ruditapes_c29228 1.349 0.905 0.264 0.357 n n n ruditapes_c7953 1.349 0.905 0.264 0.356 n n n ruditapes_c4542 -1.483 0.905 0.233 0.157 n n n ruditapes_c23840 -1.483 0.905 0.232 0.157 n n n ruditapes_c10911 -1.483 0.905 0.231 0.156 n n n ruditapes_c29392 1.799 0.905 0.061 0.109 n y n ruditapes_c20204 -2.224 0.905 0.069 0.031 n y n ruditapes_c21833 -2.224 0.905 0.069 0.031 n y n ruditapes2_c57 ? 0.905 0 0.014 n y n ruditapes2_c860 ? 0.905 sarcoplasmic calcium-binding protein 0 0.014 n y n ruditapes_c29899 1.068 0.906 5.113 5.461 n n n ruditapes2_c1147 1.097 0.906 mgc131051 protein /// 0006810 // transport /// 0044464 // cell part 2.667 2.926 n n n ruditapes_c9023 1.124 0.906 1.731 1.946 n n n ruditapes_c19123 -1.135 0.906 2.093 1.845 n n n ruditapes_c23442 -1.135 0.906 2.071 1.825 n n n ruditapes_c12644 1.169 0.906 0.965 1.128 n n n ruditapes_c10423 -1.197 0.906 1.013 0.846 n n n ruditapes_c28802 1.214 0.906 0.628 0.762 n n n ruditapes_c11146 -1.213 0.906 0.878 0.724 n n n ruditapes_c8985 1.237 0.906 0.527 0.652 n n n ruditapes_c1446 -1.227 0.906 hematopoietic stem progenitor cells /// 0048471 // perinuclear region of cytoplasm /// 0046872 // metal ion binding /// 0016020 // membrane /// 0005783 // endoplasmic reticulum /// 0051536 // iron-sulfur cluster binding 0.794 0.647 n n n ruditapes_c17294 1.249 0.906 0.478 0.597 n n n ruditapes_c20034 -1.251 0.906 0.659 0.527 n n n ruditapes_c8447 1.349 0.906 0.26 0.35 n n n ruditapes_c11661 1.349 0.906 0.257 0.347 n n n ruditapes_c15346 1.349 0.906 0.257 0.346 n n n ruditapes_c27035 1.349 0.906 0.257 0.346 n n n ruditapes_c30436 1.349 0.906 0.256 0.345 n n n ruditapes_c19527 1.349 0.906 0.255 0.343 n n n ruditapes_lrc33784 -2.224 0.906 0.068 0.03 n y n ruditapes_c3935 ? 0.906 type alpha 2 0 0.014 n y n ruditapes_c27550 -1.024 0.907 98.823 96.524 n n n ruditapes_c16520 1.051 0.907 8.381 8.807 n n n ruditapes_c18997 1.059 0.907 6.448 6.83 n n n ruditapes2_c698 -1.095 0.907 translocase of outer mitochondrial membrane 40 /// 0000299 // integral to membrane of membrane fraction /// 0005742 // mitochondrial outer membrane translocase complex /// 0008320 // protein transmembrane transporter activity /// 0016021 // integral to membrane 4.091 3.737 n n n ruditapes_c15578 1.102 0.907 2.397 2.641 n n n ruditapes_c433 -1.112 0.907 vacuolar proton pump subunit e 1 "/// 0015992 // proton transport /// 0000221 // vacuolar proton-transporting V-type ATPase, V1 domain /// 0008553 // hydrogen-exporting ATPase activity, phosphorylative mechanism" 2.913 2.62 n n n ruditapes_c30672 -1.112 0.907 2.905 2.613 n n n ruditapes_c22290 1.104 0.907 2.339 2.582 n n n ruditapes_c11241 1.136 0.907 1.429 1.623 n n n ruditapes_c7133 1.18 0.907 complement component q subcomponent-like 2 0.849 1.002 n n n ruditapes_c13714 -1.197 0.907 1.002 0.837 n n n ruditapes_c30090 -1.197 0.907 0.996 0.832 n n n ruditapes_c21943 -1.227 0.907 0.773 0.63 n n n ruditapes2_c4395 -1.271 0.907 unknown [Chrysomela tremulae] 0.57 0.448 n n n ruditapes_c27805 -1.271 0.907 0.566 0.445 n n n ruditapes_c26455 -1.334 0.907 3-hydroxyacyl-coa dehyrogenase 0.398 0.298 n n n ruditapes_c15645 -1.39 0.907 0.313 0.225 n n n ruditapes2_lrc4164 1.799 0.907 serum amyloid a 0.059 0.106 n y n ruditapes_lrc34171 1.799 0.907 0.059 0.106 n y n ruditapes_lrc15930 -2.224 0.907 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0.067 0.03 n y n ruditapes_c27125 -2.224 0.907 0.066 0.03 n y n ruditapes_c880 -2.224 0.907 0.066 0.03 n y n ruditapes_lrc16939 -2.224 0.907 0.066 0.03 n y n ruditapes_c21610 -1.049 0.908 16.413 15.649 n n n ruditapes_c15582 1.039 0.908 13.113 13.619 n n n ruditapes2_c1984 1.05 0.908 8.398 8.821 n n n ruditapes2_c873 -1.065 0.908 8.796 8.259 n n n ruditapes2_c4972 1.053 0.908 ribosomal protein l18a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 7.617 8.022 n n n ruditapes_c12220 -1.069 0.908 7.712 7.217 n n n ruditapes_c9780 -1.08 0.908 5.647 5.231 n n n ruditapes_c19113 -1.086 0.908 4.943 4.553 n n n ruditapes_lrc24064 1.074 0.908 4.226 4.54 n n n ruditapes2_c643 -1.093 0.908 ubiquitin-like 5 /// 0019941 // modification-dependent protein catabolic process /// 0005737 // cytoplasm /// 0006464 // protein modification process 4.118 3.768 n n n ruditapes_c19995 1.117 0.908 1.821 2.035 n n n ruditapes_c2611 -1.13 0.908 small nuclear ribonucleoprotein polypeptide f /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 2.164 1.916 n n n ruditapes_c30320 1.124 0.908 hypothetical protein BRAFLDRAFT_77339 [Branchiostoma floridae] 1.653 1.858 n n n ruditapes_lrc14637 -1.133 0.908 2.03 1.792 n n n ruditapes_c19098 -1.135 0.908 1.977 1.742 n n n ruditapes_c4710 -1.186 0.908 bone morphogenetic protein 1.082 0.912 n n n ruditapes2_lrc6580 -1.191 0.908 predicted protein [Nematostella vectensis] 1.037 0.87 n n n ruditapes_c7271 1.211 0.908 0.625 0.756 n n n ruditapes_c25565 1.221 0.908 0.569 0.694 n n n ruditapes2_c1487 -1.223 0.908 0.787 0.643 n n n ruditapes_c18896 -1.235 0.908 0.712 0.576 n n n ruditapes_c14826 1.259 0.908 0.421 0.531 n n n ruditapes_c25127 -1.271 0.908 0.561 0.441 n n n ruditapes_c20921 1.349 0.908 ferm domain-containing 0.246 0.332 n n n ruditapes_c26950 1.349 0.908 0.245 0.33 n n n ruditapes_c21702 1.349 0.908 0.244 0.329 n n n ruditapes_c15836 -1.39 0.908 proprotein convertase subtilisin kexin type 1 /// 0031410 // cytoplasmic vesicle /// 0003824 // catalytic activity /// 0065007 // biological regulation /// 0043687 // post-translational protein modification /// 0005488 // binding /// 0006508 // proteolysis 0.306 0.22 n n n ruditapes2_lrc4120 -1.39 0.908 cysteine protease inhibitor 0.302 0.218 n n n ruditapes_c7814 1.499 0.908 inhibitor of apoptosis protein 1 /// 0042981 // regulation of apoptosis /// 0006950 // response to stress /// 0051707 // response to other organism /// 0005515 // protein binding /// 0048513 // organ development /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol 0.129 0.194 n n n ruditapes2_c565 1.574 0.908 wsc domain protein 0.101 0.158 n y n ruditapes2_c7455 1.799 0.908 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0.057 0.103 n y n ruditapes_c27456 1.799 0.908 0.057 0.103 n y n ruditapes_c28117 -2.224 0.908 0.066 0.029 n y n ruditapes_c10117 -2.224 0.908 0.065 0.029 n y n ruditapes2_c1830 -2.224 0.908 flj45910 protein 0.064 0.029 n y n ruditapes_c10574 -1.043 0.909 21.351 20.469 n n n ruditapes_c17808 1.036 0.909 14.771 15.296 n n n ruditapes2_c195 -1.056 0.909 11.646 11.028 n n n ruditapes_c19793 -1.066 0.909 8.331 7.815 n n n ruditapes_c21694 1.075 0.909 4.084 4.39 n n n ruditapes2_c3598 -1.098 0.909 39s ribosomal protein mitochondrial /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part /// 0043229 // intracellular organelle 3.631 3.306 n n n ruditapes_lrc34101 1.091 0.909 cytochrome c oxidase subunit viic 2.83 3.086 n n n ruditapes_c12565 -1.112 0.909 2.803 2.521 n n n ruditapes_c25105 1.124 0.909 1.618 1.819 n n n ruditapes_c12085 -1.136 0.909 1.926 1.696 n n n ruditapes_c11316 1.136 0.909 splicing arginine serine-rich 2 "/// 0016607 // nuclear speck /// 0003714 // transcription corepressor activity /// 0005681 // spliceosomal complex /// 0016605 // PML body /// 0000166 // nucleotide binding /// 0003723 // RNA binding /// 0000398 // nuclear mRNA splicing, via spliceosome" 1.375 1.562 n n n ruditapes2_c2351 1.152 0.909 universal stress protein /// 0006950 // response to stress 1.098 1.265 n n n ruditapes_c3805 -1.162 0.909 1.378 1.186 n n n ruditapes_lrc35359 -1.181 0.909 60s acidic ribosomal protein p0 1.118 0.947 n n n ruditapes_s37363 -1.197 0.909 40s ribosomal protein s3 /// 0005840 // ribosome 0.949 0.792 n n n ruditapes_lrc37190 -1.205 0.909 60s ribosomal protein l10a /// 0044444 // cytoplasmic part /// 0009987 // cellular process 0.887 0.736 n n n ruditapes2_c6248 1.259 0.909 0.413 0.52 n n n ruditapes2_lrc6067 1.349 0.909 0.241 0.325 n n n ruditapes_c858 1.349 0.909 serine peptidase inhibitor- with kunitz and wap domains 1 /// 0005576 // extracellular region /// 0001669 // acrosomal vesicle /// 0004867 // serine-type endopeptidase inhibitor activity 0.24 0.324 n n n ruditapes_c20285 1.574 0.909 0.1 0.157 n y n ruditapes_c14539 1.574 0.909 0.099 0.156 n y n ruditapes_c26698 -1.483 0.909 0.212 0.143 n n n ruditapes_c6562 1.799 0.909 0.056 0.101 n y n ruditapes2_c76 ? 0.909 kazal-type serine proteinase inhibitor 0 0.013 n y n ruditapes_c27878 -1.053 0.91 13.173 12.512 n n n ruditapes_c7667 1.084 0.91 3.23 3.501 n n n ruditapes2_c2668 -1.121 0.91 2.348 2.094 n n n ruditapes_c26750 1.124 0.91 1.573 1.769 n n n ruditapes_c14223 -1.144 0.91 1.671 1.462 n n n ruditapes_c29325 -1.162 0.91 transmembrane protein 32 precursor 1.341 1.153 n n n ruditapes_c3331 -1.173 0.91 saposin b domain-containing protein 1.197 1.021 n n n ruditapes2_lrc4261 -1.197 0.91 mitochondrial ubiquinol cytochrome c reductase complex 0.921 0.769 n n n ruditapes_c38311 1.259 0.91 0.409 0.515 n n n ruditapes_s38980 1.259 0.91 0.405 0.509 n n n ruditapes_c24744 -1.271 0.91 0.538 0.424 n n n ruditapes_c13390 -1.271 0.91 chromosome 8 open reading frame 13 0.529 0.416 n n n ruditapes2_lrc4332 -1.368 0.91 calponin transgelin 0.317 0.231 n n n ruditapes2_c297 1.461 0.91 retinol binding protein like 0.144 0.211 n n n ruditapes_lrc34479 1.574 0.91 ganglioside gm2 activator precursor 0.097 0.152 n y n ruditapes_c327 -2.224 0.91 c-type lectin domain family member isoform cra_b 0.063 0.028 n y n ruditapes2_c529 -1.031 0.911 45.969 44.597 n n n ruditapes_c13199 1.035 0.911 14.408 14.911 n n n ruditapes2_c1805 1.059 0.911 5.984 6.337 n n n ruditapes_c21620 1.097 0.911 2.391 2.623 n n n ruditapes_c8706 1.099 0.911 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 2.301 2.529 n n n ruditapes_c14695 1.114 0.911 mitochondrial ribosomal protein l22 /// 0030529 // ribonucleoprotein complex /// 0044444 // cytoplasmic part /// 0043229 // intracellular organelle 1.826 2.034 n n n ruditapes_c14401 1.114 0.911 1.775 1.978 n n n ruditapes_c20039 1.124 0.911 1.548 1.74 n n n ruditapes_c30469 1.124 0.911 1.526 1.716 n n n ruditapes_c14481 -1.135 0.911 1.865 1.644 n n n ruditapes2_c2252 -1.15 0.911 cysteine rich bmp regulator 2 (chordin like) 1.506 1.309 n n n ruditapes2_lrc5949 1.162 0.911 0.945 1.098 n n n ruditapes_c10422 1.162 0.911 tpa_exp: gag protein 0.943 1.096 n n n ruditapes_c8445 1.349 0.911 0.229 0.308 n n n ruditapes_lrc33047 -1.334 0.911 coiled-coil-helix-coiled-coil-helix domain containing 3 0.368 0.276 n n n ruditapes_c31203 -1.334 0.911 0.362 0.271 n n n ruditapes_c8019 -1.39 0.911 0.284 0.204 n n n ruditapes2_c54 -1.483 0.911 expressed hypothetical protein [Trichoplax adhaerens] 0.206 0.139 n n n ruditapes_lrc36501 -1.483 0.911 galactoside- 8 /// 0005488 // binding 0.202 0.137 n n n ruditapes_c1251 1.799 0.911 0.053 0.096 n y n ruditapes2_c1593 -1.668 0.911 augmenter of liver regeneration /// 0005739 // mitochondrion 0.128 0.077 n y n ruditapes_c25235 -2.224 0.911 0.061 0.028 n y n ruditapes_c13789 -2.224 0.911 0.061 0.027 n y n ruditapes_c6376 -2.224 0.911 0.06 0.027 n y n ruditapes_lrc27822 -2.224 0.911 acyl carrier mitochondrial precursor /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding 0.06 0.027 n y n ruditapes_c13570 -1.043 0.912 19.525 18.715 n n n ruditapes_c8744 -1.051 0.912 13.955 13.284 n n n ruditapes_c15872 1.048 0.912 8.337 8.735 n n n ruditapes_lrc19190 -1.065 0.912 7.978 7.49 n n n ruditapes_c21284 1.053 0.912 6.973 7.342 n n n ruditapes_c17668 1.054 0.912 6.798 7.163 n n n ruditapes_c2025 -1.073 0.912 6.289 5.864 n n n ruditapes2_c2784 -1.081 0.912 5.015 4.638 n n n ruditapes_c29115 -1.087 0.912 4.328 3.983 n n n ruditapes_c15691 -1.091 0.912 3.957 3.627 n n n ruditapes_c9302 1.088 0.912 2.797 3.043 n n n ruditapes_c26620 -1.112 0.912 2.612 2.349 n n n ruditapes2_lrc6886 -1.112 0.912 2.594 2.333 n n n ruditapes_c26726 1.114 0.912 1.774 1.977 n n n ruditapes_c20053 -1.137 0.912 1.782 1.568 n n n ruditapes_c30137 -1.235 0.912 0.648 0.524 n n n ruditapes_c5392 1.259 0.912 0.39 0.491 n n n ruditapes_c5886 1.259 0.912 0.389 0.49 n n n ruditapes_c2177 -1.245 0.912 serum amyloid a 0.608 0.488 n n n ruditapes2_lrc4350 -1.251 0.912 0.584 0.467 n n n ruditapes2_c593 1.293 0.912 tandem repeat galectin 0.311 0.401 n n n ruditapes_c8509 -1.297 0.912 0.431 0.332 n n n ruditapes_c14801 1.349 0.912 lpa-prov partial /// 0005576 // extracellular region /// 0008236 // serine-type peptidase activity /// 0006810 // transport /// 0051240 // positive regulation of multicellular organismal process /// 0048519 // negative regulation of biological process /// 0005488 // binding /// 0030193 // regulation of blood coagulation /// 0032502 // developmental process /// 0044464 // cell part /// 0007165 // signal transduction /// 0043170 // macromolecule metabolic process 0.227 0.306 n n n ruditapes_c13682 -1.483 0.912 c4b-binding protein beta chain 0.201 0.136 n n n ruditapes_s39336 -1.483 0.912 0.199 0.134 n n n ruditapes2_c1681 1.799 0.912 0.052 0.094 n y n ruditapes_c3164 1.025 0.913 24.535 25.137 n n n ruditapes_c2550 1.031 0.913 16.672 17.196 n n n ruditapes_c15235 1.036 0.913 13.481 13.962 n n n ruditapes_c26064 -1.054 0.913 11.663 11.068 n n n ruditapes_c26713 -1.059 0.913 9.47 8.94 n n n ruditapes_lrc35765 1.055 0.913 GF24496 [Drosophila ananassae] 6.311 6.658 n n n ruditapes_c15429 -1.088 0.913 4.093 3.761 n n n ruditapes_c10882 1.078 0.913 3.454 3.724 n n n ruditapes_c26437 -1.112 0.913 2.552 2.296 n n n ruditapes_c28328 1.111 0.913 1.786 1.984 n n n ruditapes_c15283 -1.128 0.913 1.958 1.735 n n n ruditapes2_c1363 1.124 0.913 1.464 1.646 n n n ruditapes_c28881 -1.139 0.913 1.688 1.482 n n n ruditapes_c21820 -1.16 0.913 1.293 1.114 n n n ruditapes_c24052 -1.16 0.913 1.275 1.099 n n n ruditapes_c12811 1.169 0.913 0.832 0.973 n n n ruditapes_lrc39338 -1.177 0.913 1.059 0.899 n n n ruditapes2_c803 1.214 0.913 baculoviral iap repeat-containing 2 /// 0014070 // response to organic cyclic substance /// 0007166 // cell surface receptor linked signal transduction /// 0001890 // placenta development /// 0001741 // XY body /// 0046872 // metal ion binding /// 0045471 // response to ethanol /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0043234 // protein complex /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0005829 // cytosol /// 0045121 // membrane raft /// 0051291 // protein heterooligomerization /// 0004842 // ubiquitin-protein ligase activity /// 0051591 // response to cAMP /// 0010243 // response to organic nitrogen 0.543 0.66 n n n ruditapes_c19371 -1.223 0.913 heterochromatin protein 1 "/// 0044454 // nuclear chromosome part /// 0000781 // chromosome, telomeric region /// 0000775 // chromosome, centromeric region /// 0043565 // sequence-specific DNA binding /// 0006342 // chromatin silencing /// 0016568 // chromatin modification /// 0000793 // condensed chromosome /// 0006333 // chromatin assembly or disassembly /// 0005700 // polytene chromosome /// 0000792 // heterochromatin /// 0003682 // chromatin binding" 0.698 0.571 n n n ruditapes_c28920 -1.235 0.913 0.635 0.514 n n n ruditapes2_c2861 1.259 0.913 0.376 0.473 n n n ruditapes_c23440 1.349 0.913 0.221 0.298 n n n ruditapes_lrc38401 1.349 0.913 0.221 0.298 n n n ruditapes_c18898 -1.334 0.913 0.35 0.262 n n n ruditapes_lrc34614 -2.224 0.913 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.058 0.026 n y n ruditapes_c769 1.023 0.914 eukaryotic translation initiation factor 5a /// 0006413 // translational initiation /// 0003743 // translation initiation factor activity 26.212 26.814 n n n ruditapes_c7609 -1.042 0.914 19.889 19.086 n n n ruditapes_lrc23263 1.065 0.914 4.592 4.891 n n n ruditapes_c13560 -1.093 0.914 3.57 3.266 n n n ruditapes_c4504 1.089 0.914 2.674 2.911 n n n ruditapes_c12881 -1.112 0.914 2.488 2.238 n n n ruditapes_c29603 -1.112 0.914 2.483 2.233 n n n ruditapes2_lrc5395 -1.131 0.914 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 1.862 1.646 n n n ruditapes_c8150 1.124 0.914 leucine-rich repeat containing protein /// 0009987 // cellular process 1.432 1.61 n n n ruditapes_c21989 1.124 0.914 1.42 1.597 n n n ruditapes_c6090 -1.167 0.914 1.144 0.98 n n n ruditapes_c8544 1.199 0.914 0.6 0.72 n n n ruditapes2_c1491 -1.205 0.914 dipeptidase 1 /// 0046872 // metal ion binding /// 0008239 // dipeptidyl-peptidase activity /// 0006508 // proteolysis /// 0008235 // metalloexopeptidase activity /// 0016805 // dipeptidase activity 0.803 0.667 n n n ruditapes_c22396 1.221 0.914 0.501 0.611 n n n ruditapes_c23828 -1.223 0.914 dual oxidase-a 0.68 0.556 n n n ruditapes2_lrc5170 -1.271 0.914 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.49 0.386 n n n ruditapes2_c2516 -1.334 0.914 0.341 0.256 n n n ruditapes_lrc24214 -1.334 0.914 0.34 0.255 n n n ruditapes_c20741 -1.483 0.914 0.193 0.13 n n n ruditapes2_c2574 -1.483 0.914 0.192 0.129 n n n ruditapes_c25473 -1.483 0.914 0.192 0.129 n n n ruditapes_c10120 -1.483 0.914 0.189 0.127 n n n ruditapes_c3572 -1.668 0.914 0.12 0.072 n y n ruditapes2_c4466 -2.224 0.914 nadh dehydrogenase 1 alpha 7 ( ) /// 0005739 // mitochondrion 0.057 0.026 n y n ruditapes_c18336 -2.224 0.914 0.057 0.026 n y n ruditapes_c297 -2.224 0.914 0.057 0.026 n y n ruditapes_c25042 -2.224 0.914 0.056 0.025 n y n ruditapes2_c4182 ? 0.914 Pif177 [Pinctada fucata] 0 0.012 n y n ruditapes_c5991 1.029 0.915 17.7 18.215 n n n ruditapes2_c1945 1.052 0.915 6.713 7.061 n n n ruditapes_c34045 -1.076 0.915 mitochondrial cytochrome c1 "/// 0005811 // lipid particle /// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0045153 // electron transporter, transferring electrons within CoQH2-cytochrome c reductase complex activity /// 0020037 // heme binding /// 0005750 // mitochondrial respiratory chain complex III" 5.287 4.914 n n n ruditapes_c16155 1.064 0.915 4.615 4.911 n n n ruditapes_c30860 1.067 0.915 4.346 4.637 n n n ruditapes_c5817 -1.086 0.915 4.186 3.856 n n n ruditapes_c2387 1.088 0.915 1a1l1_fugru ame: full=1-aminocyclopropane-1-carboxylate synthase-like protein 1 short=acc synthase-like protein 2.647 2.879 n n n ruditapes_c23363 -1.098 0.915 3.137 2.857 n n n ruditapes_c25126 1.092 0.915 2.414 2.636 n n n ruditapes_c8550 1.095 0.915 2.29 2.509 n n n ruditapes_c11958 -1.112 0.915 2.456 2.209 n n n ruditapes_c28154 -1.128 0.915 1.873 1.661 n n n ruditapes_c13780 -1.137 0.915 1.643 1.445 n n n ruditapes2_c2451 -1.14 0.915 1.569 1.375 n n n ruditapes_c9603 1.136 0.915 1.175 1.335 n n n ruditapes_c31242 1.142 0.915 1.113 1.27 n n n ruditapes_c26099 -1.17 0.915 1.079 0.922 n n n ruditapes_lrc33125 -1.227 0.915 calponin-like protein 0.645 0.525 n n n ruditapes2_c2991 -1.251 0.915 0.543 0.434 n n n ruditapes_c23319 -1.257 0.915 0.519 0.413 n n n ruditapes_c30510 -1.271 0.915 ubiquinone menaquinone biosynthesis methyltransferase 0.478 0.376 n n n ruditapes_lrc36010 1.349 0.915 epididymal secretory protein e1 precursor /// 0006869 // lipid transport /// 0044424 // intracellular part 0.212 0.286 n n n ruditapes2_lrc5938 1.349 0.915 stromal cell derived factor receptor 2 homolog 0.211 0.284 n n n ruditapes2_lrc5247 1.349 0.915 countin-like protein 0.21 0.283 n n n ruditapes_c13818 -1.483 0.915 0.185 0.125 n n n ruditapes_c28750 1.799 0.915 0.049 0.088 n y n ruditapes_c30334 1.799 0.915 0.049 0.088 n y n ruditapes_c129 -2.224 0.915 0.056 0.025 n y n ruditapes_c15910 -2.224 0.915 structural maintenance of 0.056 0.025 n y n ruditapes_lrc37876 -2.224 0.915 0.055 0.025 n y n ruditapes2_c5386 1.012 0.916 ribosomal protein s11 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0019843 // rRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 65.319 66.078 n n n ruditapes2_c2060 1.064 0.916 comm domain containing 5 /// 0005634 // nucleus /// 0005515 // protein binding /// 0045595 // regulation of cell differentiation /// 0007050 // cell cycle arrest 4.485 4.774 n n n ruditapes2_c1976 1.074 0.916 chromosome 9 open reading frame 116 3.566 3.829 n n n ruditapes_c12142 1.105 0.916 1.848 2.043 n n n ruditapes_c24188 1.116 0.916 PREDICTED: hypothetical protein [Gallus gallus] 1.552 1.732 n n n ruditapes_c22340 1.124 0.916 1.37 1.54 n n n ruditapes_c17329 -1.14 0.916 1.534 1.345 n n n ruditapes_c4751 1.145 0.916 proline-rich transmembrane protein 1 1.033 1.182 n n n ruditapes_c7684 -1.177 0.916 0.996 0.846 n n n ruditapes_c4126 1.199 0.916 0.579 0.694 n n n ruditapes2_lrc6012 1.221 0.916 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 0.472 0.576 n n n ruditapes_c22336 1.237 0.916 fibrinogen and fibronectin /// 0030141 // secretory granule 0.421 0.521 n n n ruditapes2_c2147 1.259 0.916 0.353 0.445 n n n ruditapes_c14298 -1.251 0.916 hypothetical protein CC1G_06450 [Coprinopsis cinerea okayama7#130] 0.526 0.421 n n n ruditapes_c21086 1.349 0.916 0.207 0.28 n n n ruditapes2_c2517 1.349 0.916 serine protease inhibitor 2 0.203 0.274 n n n ruditapes_lrc35358 -1.334 0.916 0.328 0.246 n n n ruditapes_s35203 -1.334 0.916 0.324 0.243 n n n ruditapes_c10488 -1.39 0.916 type alpha 2 0.254 0.182 n n n ruditapes2_c2683 -1.483 0.916 hemagglutinin amebocyte aggregation factor precursor 0.182 0.123 n n n ruditapes_c3245 1.799 0.916 wsc domain protein 0.048 0.086 n y n ruditapes2_c190 -2.224 0.916 0.054 0.024 n y n ruditapes_c15960 -2.224 0.916 0.054 0.024 n y n ruditapes_c3891 -2.224 0.916 mitogen-activated protein-binding protein-interacting protein /// 0005515 // protein binding /// 0031902 // late endosome membrane /// 0000186 // activation of MAPKK activity /// 0005765 // lysosomal membrane 0.054 0.024 n y n ruditapes_lrc33145 -2.224 0.916 tripsin i-p1 0.054 0.024 n y n ruditapes_lrc11644 -2.224 0.916 0.053 0.024 n y n ruditapes_lrc8682 1.039 0.917 10.596 11.005 n n n ruditapes_c29653 -1.053 0.917 10.786 10.24 n n n ruditapes2_c1863 -1.062 0.917 mitochondrial ribosomal protein s35 7.987 7.522 n n n ruditapes_c14980 -1.072 0.917 5.632 5.252 n n n ruditapes2_c3690 -1.089 0.917 transport protein sec61 subunit beta 3.671 3.372 n n n ruditapes_lrc18275 -1.097 0.917 phospholipase d3 /// 0016020 // membrane /// 0016787 // hydrolase activity 3.11 2.835 n n n ruditapes2_c1783 1.149 0.917 0.959 1.102 n n n ruditapes_c11104 1.152 0.917 0.924 1.065 n n n ruditapes_c14083 -1.167 0.917 expressed sequence aw549877 1.074 0.92 n n n ruditapes_c22770 1.169 0.917 0.75 0.877 n n n ruditapes_c27888 1.199 0.917 mgc68831 partial 0.563 0.675 n n n ruditapes_c4218 1.199 0.917 0.561 0.673 n n n ruditapes_c21499 1.237 0.917 0.404 0.499 n n n ruditapes2_c1421 1.259 0.917 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0.347 0.437 n n n ruditapes2_c1181 -1.251 0.917 0.516 0.412 n n n ruditapes_c17111 -1.271 0.917 c4b-binding protein beta 0.458 0.36 n n n ruditapes_lrc34137 -1.297 0.917 anaphase promoting complex subunit 13 /// 0019941 // modification-dependent protein catabolic process /// 0051301 // cell division /// 0005634 // nucleus /// 0007067 // mitosis 0.386 0.298 n n n ruditapes_c29843 -1.297 0.917 stromal cell derived factor 2-like protein 0.386 0.297 n n n ruditapes_c18861 1.349 0.917 0.202 0.273 n n n ruditapes_c30757 1.349 0.917 0.202 0.273 n n n ruditapes_lrc32750 1.349 0.917 signal transduction protein with efhand domain 0.2 0.27 n n n ruditapes_c1691 1.349 0.917 0.199 0.268 n n n ruditapes2_lrc6434 1.574 0.917 transgelin 2 0.083 0.131 n y n ruditapes_c30209 1.799 0.917 0.047 0.084 n y n ruditapes_c49 -1.668 0.917 0.111 0.066 n y n ruditapes_lrc6950 -1.047 0.918 14.224 13.588 n n n ruditapes2_c186 -1.049 0.918 nadh-ubiquinone oxidoreductase subunit /// 0003954 // NADH dehydrogenase activity /// 0055114 // oxidation reduction /// 0016020 // membrane 12.599 12.005 n n n ruditapes_c8674 -1.052 0.918 11.216 10.662 n n n ruditapes_c3521 1.046 0.918 7.639 7.992 n n n ruditapes_c15677 1.089 0.918 2.405 2.618 n n n ruditapes_c17551 1.094 0.918 2.179 2.384 n n n ruditapes2_c5045 -1.112 0.918 thyroid hormone receptor interactor 3 /// 0005488 // binding 2.282 2.052 n n n ruditapes2_c2488 1.136 0.918 1.091 1.239 n n n ruditapes_c23799 -1.142 0.918 1.412 1.237 n n n ruditapes_c14976 -1.162 0.918 39s ribosomal protein l43 /// 0005840 // ribosome 1.103 0.949 n n n ruditapes_c17602 -1.165 0.918 1.082 0.929 n n n ruditapes_c6711 -1.17 0.918 1.004 0.858 n n n ruditapes_c21540 1.18 0.918 0.656 0.774 n n n ruditapes_c9588 -1.213 0.918 importin beta-3 /// 0006886 // intracellular protein transport /// 0005643 // nuclear pore /// 0008320 // protein transmembrane transporter activity /// 0005829 // cytosol 0.669 0.551 n n n ruditapes2_c4979 1.349 0.918 thioredoxin domain-containing protein 17 /// 0004601 // peroxidase activity /// 0005515 // protein binding /// 0033209 // tumor necrosis factor-mediated signaling pathway /// 0005829 // cytosol /// 0047134 // protein-disulfide reductase activity /// 0009055 // electron carrier activity 0.195 0.264 n n n ruditapes_c27043 -1.334 0.918 0.308 0.231 n n n ruditapes_c676 -1.39 0.918 uncharacterized protein 0.24 0.173 n n n ruditapes_c29257 1.574 0.918 0.081 0.128 n y n ruditapes2_c4091 -2.224 0.918 0.052 0.023 n y n ruditapes2_lrc6288 -2.224 0.918 0.052 0.023 n y n ruditapes_c14231 -2.224 0.918 0.052 0.023 n y n ruditapes2_c2435 -1.036 0.919 25.926 25.025 n n n ruditapes_lrc14605 -1.044 0.919 16.387 15.703 n n n ruditapes2_c3319 1.05 0.919 6.517 6.844 n n n ruditapes_c27693 -1.069 0.919 5.942 5.56 n n n ruditapes2_c1424 1.066 0.919 3.983 4.247 n n n ruditapes_c31333 -1.078 0.919 4.545 4.216 n n n ruditapes_c18144 -1.081 0.919 4.27 3.949 n n n ruditapes_c24438 -1.099 0.919 2.819 2.565 n n n ruditapes_c11674 -1.14 0.919 1.436 1.26 n n n ruditapes_c3969 1.156 0.919 0.827 0.957 n n n ruditapes_s38113 -1.17 0.919 0.996 0.851 n n n ruditapes_c23631 -1.197 0.919 0.751 0.627 n n n ruditapes_c10562 -1.205 0.919 0.714 0.593 n n n ruditapes_c9987 -1.213 0.919 0.657 0.542 n n n ruditapes_c572 1.249 0.919 0.351 0.439 n n n ruditapes_c4983 -1.251 0.919 cell death-regulatory protein grim19 "/// 0006810 // transport /// 0008624 // induction of apoptosis by extracellular signals /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005747 // mitochondrial respiratory chain complex I /// 0030262 // apoptotic nuclear changes /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0045892 // negative regulation of transcription, DNA-dependent /// 0017148 // negative regulation of translation /// 0030308 // negative regulation of cell growth" 0.491 0.393 n n n ruditapes_s39241 -1.271 0.919 histone h3 0.433 0.341 n n n ruditapes2_c2439 -1.297 0.919 0.368 0.284 n n n ruditapes_c10047 -1.297 0.919 0.364 0.28 n n n ruditapes_c24676 -1.483 0.919 0.171 0.115 n n n ruditapes_lrc35687 -1.483 0.919 sialic acid binding lectin 0.17 0.115 n n n ruditapes_s38773 -1.483 0.919 ribosomal protein s30 0.17 0.115 n n n ruditapes_c19789 -1.483 0.919 0.169 0.114 n n n ruditapes_s36593 -1.483 0.919 0.169 0.114 n n n ruditapes_c22384 -1.483 0.919 sialic acid-binding lectin 0.168 0.113 n n n ruditapes_c16147 -1.483 0.919 0.167 0.113 n n n ruditapes_c19089 -1.483 0.919 0.167 0.113 n n n ruditapes_c27862 -1.483 0.919 0.167 0.113 n n n ruditapes_c8585 -1.483 0.919 0.167 0.113 n n n ruditapes_c28837 1.799 0.919 0.045 0.081 n y n ruditapes_lrc17086 1.799 0.919 0.044 0.079 n y n ruditapes_c6602 -2.224 0.919 heavy polypeptide non-muscle /// 0055001 // muscle cell development /// 0005524 // ATP binding /// 0003774 // motor activity /// 0016459 // myosin complex /// 0043005 // neuron projection /// 0003779 // actin binding /// 0021591 // ventricular system development /// 0051649 // establishment of localization in cell /// 0031175 // neuron projection development /// 0030036 // actin cytoskeleton organization /// 0006928 // cell motion /// 0051146 // striated muscle cell differentiation /// 0022607 // cellular component assembly 0.051 0.023 n y n ruditapes_c12489 -2.224 0.919 0.05 0.023 n y n ruditapes_c8862 1.02 0.92 27.13 27.683 n n n ruditapes_lrc28305 -1.074 0.92 beta 2c /// 0005856 // cytoskeleton /// 0000166 // nucleotide binding /// 0006928 // cell motion /// 0042288 // MHC class I protein binding 4.923 4.583 n n n ruditapes_c19808 1.063 0.92 4.223 4.489 n n n ruditapes_c16232 1.069 0.92 3.66 3.912 n n n ruditapes_c30287 -1.083 0.92 3.876 3.578 n n n ruditapes_c31210 1.077 0.92 2.974 3.203 n n n ruditapes_c28165 -1.112 0.92 coiled-coil domain containing 138 2.164 1.946 n n n ruditapes_c16197 1.111 0.92 1.538 1.708 n n n ruditapes_c39076 1.111 0.92 1.53 1.7 n n n ruditapes_c4473 1.116 0.92 thioester-containing protein 1.392 1.554 n n n ruditapes_c20024 -1.142 0.92 1.344 1.177 n n n ruditapes_c11158 -1.148 0.92 1.25 1.089 n n n ruditapes_c14253 -1.177 0.92 0.89 0.756 n n n ruditapes_c22147 1.199 0.92 0.518 0.621 n n n ruditapes2_lrc5281 1.237 0.92 cg15828 cg15828- partial 0.379 0.468 n n n ruditapes_lrc38278 1.259 0.92 ribosomal protein s3a /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0006917 // induction of apoptosis /// 0022627 // cytosolic small ribosomal subunit 0.318 0.4 n n n ruditapes2_c1343 -1.271 0.92 cg3603-pa 0.425 0.334 n n n ruditapes_c18489 -1.271 0.92 0.425 0.334 n n n ruditapes_c6113 -1.271 0.92 0.416 0.327 n n n ruditapes2_lrc2102 1.349 0.92 0.188 0.254 n n n ruditapes_c27148 1.349 0.92 0.184 0.249 n n n ruditapes2_lrc5312 -1.334 0.92 0.295 0.221 n n n ruditapes2_lrc4002 -1.334 0.92 0.294 0.221 n n n ruditapes_c19322 -1.483 0.92 0.165 0.111 n n n ruditapes_s35318 -1.483 0.92 0.165 0.111 n n n ruditapes_lrc12538 -2.224 0.92 0.049 0.022 n y n ruditapes_lrc34412 -2.224 0.92 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0.049 0.022 n y n ruditapes2_c1892 1.032 0.921 12.918 13.336 n n n ruditapes_c9181 1.034 0.921 12.002 12.407 n n n ruditapes_c16566 -1.06 0.921 7.724 7.29 n n n ruditapes_c12075 -1.064 0.921 6.572 6.175 n n n ruditapes2_c3195 1.098 0.921 1.86 2.042 n n n ruditapes_c13370 -1.112 0.921 2.126 1.912 n n n ruditapes_lrc32468 1.124 0.921 1.195 1.344 n n n ruditapes_c24630 -1.148 0.921 1.235 1.076 n n n ruditapes_c5412 1.145 0.921 hepatitis b virus x interacting protein /// 0019079 // viral genome replication /// 0006916 // anti-apoptosis /// 0005515 // protein binding /// 0009615 // response to virus /// 0005829 // cytosol /// 0043154 // negative regulation of caspase activity 0.921 1.054 n n n ruditapes_c22339 -1.186 0.921 0.797 0.672 n n n ruditapes_c31356 -1.191 0.921 0.753 0.632 n n n ruditapes_c24285 1.199 0.921 0.511 0.613 n n n ruditapes_c262 1.199 0.921 0.51 0.611 n n n ruditapes_c8244 1.199 0.921 0.509 0.61 n n n ruditapes_c19956 1.199 0.921 0.507 0.608 n n n ruditapes_c21738 1.199 0.921 0.502 0.602 n n n ruditapes2_c1021 1.199 0.921 PREDICTED: hypothetical protein isoform 1 [Ciona intestinalis] 0.501 0.601 n n n ruditapes_c7893 -1.213 0.921 isoform a 0.618 0.509 n n n ruditapes2_c598 1.349 0.921 0.18 0.243 n n n ruditapes_c31536 1.349 0.921 af309564_1gtpase arhj 0.18 0.243 n n n ruditapes_c20138 1.349 0.921 0.179 0.242 n n n ruditapes_c22542 -1.334 0.921 0.288 0.216 n n n ruditapes_c17635 -1.483 0.921 0.162 0.109 n n n ruditapes_c18831 -1.483 0.921 0.161 0.109 n n n ruditapes_s36448 -1.483 0.921 class b basic helix-loop-helix 0.161 0.109 n n n ruditapes_s39152 -1.483 0.921 0.161 0.109 n n n ruditapes_c5930 -1.483 0.921 ubiquinol-cytochrome c reductase binding protein 0.16 0.108 n n n ruditapes_c29586 -1.483 0.921 0.159 0.107 n n n ruditapes2_c1381 1.036 0.922 hypothetical protein RUMHYD_03834 [Blautia hydrogenotrophica DSM 10507] 10.886 11.273 n n n ruditapes_c9950 -1.053 0.922 9.95 9.453 n n n ruditapes_c1518 1.089 0.922 2.208 2.404 n n n ruditapes_c14838 1.094 0.922 1.96 2.144 n n n ruditapes_c1944 -1.156 0.922 1.072 0.927 n n n ruditapes_c22202 -1.197 0.922 0.695 0.581 n n n ruditapes_lrc35788 -1.213 0.922 0.61 0.503 n n n ruditapes_c21191 1.237 0.922 0.356 0.44 n n n ruditapes_c20813 -1.235 0.922 0.513 0.415 n n n ruditapes2_lrc6829 -1.271 0.922 glutathione s-transferase 0.404 0.318 n n n ruditapes_c23521 -1.271 0.922 0.397 0.313 n n n ruditapes_c6651 1.349 0.922 0.178 0.24 n n n ruditapes2_c2851 -1.39 0.922 0.217 0.156 n n n ruditapes_lrc36160 -1.483 0.922 0.158 0.106 n n n ruditapes_lrc19949 -1.483 0.922 0.157 0.106 n n n ruditapes_s36150 -1.483 0.922 mitochondrial cytochrome c oxidase subunit 6b /// 0005739 // mitochondrion 0.155 0.105 n n n ruditapes_s39577 -1.483 0.922 0.155 0.105 n n n ruditapes2_lrc4858 1.021 0.923 actin /// 0000281 // cytokinesis after mitosis /// 0040007 // growth /// 0002119 // nematode larval development /// 0005515 // protein binding /// 0030036 // actin cytoskeleton organization /// 0040035 // hermaphrodite genitalia development /// 0007517 // muscle organ development /// 0044424 // intracellular part /// 0009792 // embryonic development ending in birth or egg hatching 24.832 25.351 n n n ruditapes_c20812 1.027 0.923 16.653 17.102 n n n ruditapes_lrc34763 1.044 0.923 developmentally-regulated vdg3 7.317 7.64 n n n ruditapes_c12508 -1.059 0.923 7.583 7.161 n n n ruditapes_c12503 1.058 0.923 4.553 4.817 n n n ruditapes2_c2501 -1.07 0.923 protein 5.13 4.793 n n n ruditapes_c15528 -1.096 0.923 2.757 2.516 n n n ruditapes_c18737 1.102 0.923 1.678 1.849 n n n ruditapes_c26583 -1.112 0.923 2.009 1.807 n n n ruditapes_c27734 -1.112 0.923 2.008 1.806 n n n ruditapes_c22812 -1.112 0.923 1.989 1.788 n n n ruditapes_c24737 1.124 0.923 1.162 1.306 n n n ruditapes_c16919 1.124 0.923 1.156 1.299 n n n ruditapes_c282 -1.134 0.923 1.416 1.249 n n n ruditapes2_lrc4275 1.139 0.923 0.925 1.054 n n n ruditapes_c17895 1.145 0.923 0.872 0.998 n n n ruditapes_c1278 -1.16 0.923 1.014 0.874 n n n ruditapes_c31167 -1.177 0.923 0.82 0.696 n n n ruditapes_c11409 1.199 0.923 0.478 0.574 n n n ruditapes2_c628 1.214 0.923 0.418 0.508 n n n ruditapes2_lrc4834 1.259 0.923 conserved hypothetical protein [Burkholderia pseudomallei 305] 0.3 0.378 n n n ruditapes_c19799 1.259 0.923 heparan sulfate proteoglycan 2 0.296 0.373 n n n ruditapes_c1180 -1.251 0.923 0.444 0.355 n n n ruditapes_c22298 -1.271 0.923 0.388 0.305 n n n ruditapes_lrc34216 1.349 0.923 developmentally-regulated vdg3 0.174 0.235 n n n ruditapes_c10024 1.349 0.923 0.171 0.231 n n n ruditapes_s38007 -1.483 0.923 ubiquitin-like protein fubi 0.154 0.104 n n n ruditapes_c11585 -1.483 0.923 0.153 0.103 n n n ruditapes_c16333 -1.483 0.923 0.152 0.102 n n n ruditapes_c17982 -1.483 0.923 0.151 0.102 n n n ruditapes_c6325 -1.483 0.923 0.151 0.102 n n n ruditapes2_lrc4761 -2.224 0.923 0.045 0.02 n y n ruditapes_c17962 -2.224 0.923 0.045 0.02 n y n ruditapes2_c3221 -1.028 0.924 cyclophilin a /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 40.231 39.118 n n n ruditapes_c829 1.027 0.924 arginine kinase /// 0005524 // ATP binding /// 0004054 // arginine kinase activity 16.125 16.56 n n n ruditapes2_c3337 -1.063 0.924 adhesion lipoprotein 6.283 5.91 n n n ruditapes_c5094 -1.074 0.924 myosin heavy chain /// 0005524 // ATP binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0003779 // actin binding /// 0005863 // striated muscle thick filament 4.498 4.188 n n n ruditapes2_c1576 1.064 0.924 3.652 3.887 n n n ruditapes2_c3331 1.077 0.924 26s protease regulatory subunit 6b "/// 0005524 // ATP binding /// 0008540 // proteasome regulatory particle, base subcomplex /// 0016887 // ATPase activity /// 0005634 // nucleus /// 0006508 // proteolysis /// 0005515 // protein binding /// 0030163 // protein catabolic process /// 0005737 // cytoplasm /// 0006457 // protein folding /// 0004175 // endopeptidase activity" 2.709 2.917 n n n ruditapes_c15356 1.082 0.924 2.377 2.571 n n n ruditapes_c5550 -1.096 0.924 2.672 2.438 n n n ruditapes_c19896 1.102 0.924 1.632 1.798 n n n ruditapes2_c1023 1.124 0.924 chitinase 2 1.129 1.27 n n n ruditapes_c27436 1.156 0.924 0.724 0.837 n n n ruditapes_c18658 1.169 0.924 0.627 0.733 n n n ruditapes2_c4011 1.18 0.924 0.566 0.668 n n n ruditapes_c16465 -1.189 0.924 0.715 0.601 n n n ruditapes_c22540 1.199 0.924 0.471 0.564 n n n ruditapes2_c4039 1.199 0.924 dna-binding nuclear protein p8 0.47 0.563 n n n ruditapes_c26677 1.199 0.924 0.468 0.561 n n n ruditapes_lrc37263 1.237 0.924 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0003012 // muscle system process /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0.343 0.424 n n n ruditapes_c21372 -1.251 0.924 0.434 0.347 n n n ruditapes_lrc28223 -1.271 0.924 0.384 0.302 n n n ruditapes2_c4654 -1.271 0.924 0.381 0.3 n n n ruditapes_c24426 1.349 0.924 0.169 0.228 n n n ruditapes_lrc26990 1.349 0.924 40s ribosomal protein s15 0.167 0.225 n n n ruditapes_c18771 1.349 0.924 development and differentiation enhancing factor 1 0.166 0.224 n n n ruditapes_c6920 1.349 0.924 0.166 0.224 n n n ruditapes_c8520 1.349 0.924 0.166 0.224 n n n ruditapes_c5528 -1.334 0.924 0.269 0.201 n n n ruditapes_c4995 -1.334 0.924 acn9 protein mitochondrial precursor 0.268 0.201 n n n ruditapes_s33962 -1.334 0.924 0.266 0.199 n n n ruditapes_c19737 -1.483 0.924 0.151 0.102 n n n ruditapes_lrc35896 -1.483 0.924 nadh: oxidoreductase subunit /// 0005743 // mitochondrial inner membrane 0.149 0.101 n n n ruditapes_c14916 -1.483 0.924 0.148 0.1 n n n ruditapes_lrc21495 -1.483 0.924 0.148 0.1 n n n ruditapes_c13732 -1.483 0.924 0.147 0.099 n n n ruditapes_c30551 -1.03 0.925 34.458 33.449 n n n ruditapes_c6310 1.053 0.925 5.098 5.367 n n n ruditapes_lrc9477 1.06 0.925 4.122 4.369 n n n ruditapes2_lrc3100 -1.076 0.925 ly-6 neurotoxin-related protein 4.065 3.776 n n n ruditapes2_c871 1.067 0.925 3.338 3.561 n n n ruditapes_c8489 1.095 0.925 1.786 1.955 n n n ruditapes2_c829 -1.112 0.925 1.912 1.719 n n n ruditapes_c1405 1.136 0.925 mitochondrial ribosomal protein l17 /// 0005622 // intracellular 0.914 1.039 n n n ruditapes_lrc38117 1.199 0.925 protein /// 0003824 // catalytic activity 0.452 0.542 n n n ruditapes_lrc20523 -1.197 0.925 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 0.642 0.536 n n n ruditapes_c15063 -1.213 0.925 protein 0.568 0.468 n n n ruditapes_c17907 1.237 0.925 0.335 0.414 n n n ruditapes_c18248 1.237 0.925 0.332 0.411 n n n ruditapes_c30448 -1.271 0.925 0.371 0.292 n n n ruditapes2_c1232 1.349 0.925 0.165 0.223 n n n ruditapes_c29721 1.349 0.925 odd oz protein 0.165 0.222 n n n ruditapes_lrc39202 1.349 0.925 nadh dehydrogenase 1 beta 8kda 0.163 0.22 n n n ruditapes_c20027 1.349 0.925 0.162 0.219 n n n ruditapes_c5180 1.349 0.925 0.162 0.219 n n n ruditapes_lrc26056 -1.334 0.925 0.26 0.195 n n n ruditapes2_c2387 -2.224 0.925 fibroblast growth factor receptor 2 /// 0044425 // membrane part /// 0004713 // protein tyrosine kinase activity /// 0006468 // protein amino acid phosphorylation /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0048522 // positive regulation of cellular process /// 0050793 // regulation of developmental process /// 0048513 // organ development /// 0007243 // protein kinase cascade /// 0048869 // cellular developmental process /// 0004872 // receptor activity 0.044 0.02 n y n ruditapes_c2400 -2.224 0.925 0.043 0.02 n y n ruditapes_lrc17267 -2.224 0.925 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0.043 0.019 n y n ruditapes2_c55 1.01 0.926 65.33 65.954 n n n ruditapes_c29296 -1.051 0.926 9.451 8.991 n n n ruditapes_c4591 1.049 0.926 5.575 5.85 n n n ruditapes2_lrc5299 1.056 0.926 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 4.427 4.675 n n n ruditapes_c16562 1.059 0.926 4.023 4.261 n n n ruditapes2_c2832 -1.078 0.926 3.832 3.555 n n n ruditapes_c11259 -1.079 0.926 3.755 3.48 n n n ruditapes2_c2962 1.069 0.926 glutaredoxin 5 /// 0005737 // cytoplasm 3.071 3.284 n n n ruditapes_c24965 1.072 0.926 2.833 3.038 n n n ruditapes_c18439 1.085 0.926 2.094 2.273 n n n ruditapes2_c2119 -1.112 0.926 fg-gap repeat family protein 1.866 1.678 n n n ruditapes_c10535 -1.112 0.926 1.832 1.648 n n n ruditapes_c8366 -1.112 0.926 inhibitor of apoptosis protein 1 1.822 1.639 n n n ruditapes_c22678 1.111 0.926 1.299 1.443 n n n ruditapes2_c2194 1.149 0.926 tyrosine kinase receptor /// 0016301 // kinase activity 0.749 0.86 n n n ruditapes_c17958 1.149 0.926 0.749 0.86 n n n ruditapes_c7219 -1.156 0.926 0.959 0.829 n n n ruditapes_lrc32498 -1.186 0.926 0.704 0.593 n n n ruditapes_c30631 -1.213 0.926 0.554 0.457 n n n ruditapes_c16787 -1.223 0.926 0.505 0.413 n n n ruditapes2_c1579 -1.223 0.926 protein 0.502 0.411 n n n ruditapes_c10148 -1.297 0.926 dynein light chain 0.311 0.24 n n n ruditapes_c19463 1.349 0.926 0.161 0.217 n n n ruditapes_c23713 1.349 0.926 0.161 0.217 n n n ruditapes_c8067 1.349 0.926 0.159 0.215 n n n ruditapes_c20105 1.349 0.926 0.159 0.214 n n n ruditapes_c20424 -1.334 0.926 0.253 0.19 n n n ruditapes_c22152 -1.334 0.926 0.252 0.189 n n n ruditapes_c22018 -1.334 0.926 0.25 0.187 n n n ruditapes2_c3008 -1.483 0.926 0.139 0.094 n n n ruditapes2_c591 -1.046 0.927 11.609 11.096 n n n ruditapes_c15415 1.04 0.927 7.596 7.903 n n n ruditapes2_c61 1.061 0.927 metallothionein 3.695 3.921 n n n ruditapes_c26116 -1.08 0.927 3.563 3.298 n n n ruditapes_c31306 -1.09 0.927 2.795 2.564 n n n ruditapes_c11990 -1.091 0.927 lsm5 u6 small nuclear rna associated /// 0008380 // RNA splicing /// 0030529 // ribonucleoprotein complex /// 0005634 // nucleus /// 0046982 // protein heterodimerization activity /// 0006397 // mRNA processing /// 0006402 // mRNA catabolic process /// 0005737 // cytoplasm /// 0003723 // RNA binding 2.667 2.444 n n n ruditapes_c20674 -1.095 0.927 2.469 2.255 n n n ruditapes2_c2138 -1.098 0.927 2.347 2.136 n n n ruditapes2_lrc5694 1.092 0.927 fk506-binding protein /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 1.766 1.929 n n n ruditapes_c18456 -1.112 0.927 dc2 protein /// 0016021 // integral to membrane 1.808 1.626 n n n ruditapes_c7595 -1.112 0.927 1.799 1.618 n n n ruditapes_lrc38101 1.107 0.927 glutathione s-transferase 1.349 1.494 n n n ruditapes_c11621 -1.138 0.927 1.204 1.058 n n n ruditapes_c9368 1.149 0.927 0.745 0.857 n n n ruditapes_c20981 1.156 0.927 0.671 0.776 n n n ruditapes_lrc33734 -1.165 0.927 0.854 0.733 n n n ruditapes_lrc24344 -1.177 0.927 0.745 0.633 n n n ruditapes_c14248 -1.197 0.927 0.619 0.517 n n n ruditapes2_c94 1.211 0.927 0.389 0.47 n n n ruditapes_c28501 -1.213 0.927 0.538 0.444 n n n ruditapes_c30970 1.221 0.927 0.36 0.439 n n n ruditapes_c13310 -1.213 0.927 0.529 0.436 n n n ruditapes_s39628 -1.213 0.927 calcium binding protein 2 0.529 0.436 n n n ruditapes_c22214 1.237 0.927 0.313 0.387 n n n ruditapes_c13463 -1.235 0.927 centrin /// 0005488 // binding /// 0009987 // cellular process 0.446 0.361 n n n ruditapes2_lrc7114 -1.271 0.927 0.351 0.276 n n n ruditapes_c23831 1.349 0.927 0.157 0.212 n n n ruditapes_c30834 1.349 0.927 0.157 0.211 n n n ruditapes_c17269 1.349 0.927 0.155 0.209 n n n ruditapes_c11930 1.349 0.927 peptidyl-prolyl cis-trans isomerase /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0.154 0.208 n n n ruditapes_s39595 1.349 0.927 f1f0-type atp synthase subunit 0.153 0.207 n n n ruditapes_c13857 -1.334 0.927 0.248 0.186 n n n ruditapes_lrc28060 -1.334 0.927 0.248 0.186 n n n ruditapes2_c2476 -1.334 0.927 0.245 0.184 n n n ruditapes_c19107 -1.334 0.927 0.243 0.182 n n n ruditapes_c16548 -1.483 0.927 0.138 0.093 n n n ruditapes2_lrc5514 -1.483 0.927 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 0.137 0.092 n n n ruditapes_c11382 -1.483 0.927 0.137 0.092 n n n ruditapes_lrc33177 -1.483 0.927 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 0.136 0.092 n n n ruditapes_lrc34585 -2.224 0.927 nucleoside diphosphate kinase /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process 0.041 0.019 n y n ruditapes2_c1655 1.015 0.928 33.951 34.462 n n n ruditapes_c30314 -1.031 0.928 28.859 27.986 n n n ruditapes_c18916 1.019 0.928 24.242 24.712 n n n ruditapes_c1972 1.041 0.928 7.346 7.643 n n n ruditapes2_c2957 1.045 0.928 6.241 6.523 n n n ruditapes2_c2748 -1.058 0.928 6.861 6.487 n n n ruditapes_lrc33837 -1.06 0.928 6.357 5.999 n n n ruditapes_c15501 1.052 0.928 4.936 5.191 n n n ruditapes_c4243 1.074 0.928 spi1_craviserine protease inhibitor cvsi-1 precursor 2.533 2.721 n n n ruditapes_c5922 -1.094 0.928 coactosin-like 1 2.492 2.278 n n n ruditapes_c11893 -1.098 0.928 2.277 2.074 n n n ruditapes_c27287 1.089 0.928 1.84 2.003 n n n ruditapes_c24806 1.092 0.928 1.721 1.879 n n n ruditapes_c13770 -1.112 0.928 apextrin 1.737 1.562 n n n ruditapes_c12677 -1.112 0.928 1.731 1.557 n n n ruditapes_c23666 -1.148 0.928 nonhomologous end-joining factor 1 /// 0030217 // T cell differentiation /// 0010212 // response to ionizing radiation /// 0005634 // nucleus /// 0042802 // identical protein binding /// 0030183 // B cell differentiation /// 0006303 // double-strand break repair via nonhomologous end joining 1.019 0.888 n n n ruditapes2_lrc4852 -1.153 0.928 ependymin related protein-1 precursor 0.947 0.821 n n n ruditapes_c20852 -1.17 0.928 talin 1 "/// 0005200 // structural constituent of cytoskeleton /// 0007016 // cytoskeletal anchoring at plasma membrane /// 0005856 // cytoskeleton /// 0005925 // focal adhesion /// 0043231 // intracellular membrane-bounded organelle /// 0035160 // maintenance of epithelial integrity, open tracheal system /// 0005537 // mannose binding /// 0030274 // LIM domain binding /// 0003779 // actin binding /// 0007044 // cell-substrate junction assembly /// 0001726 // ruffle /// 0006911 // phagocytosis, engulfment /// 0005911 // cell-cell junction /// 0007043 // cell-cell junction assembly /// 0005737 // cytoplasm /// 0016203 // muscle attachment /// 0006928 // cell motion /// 0030866 // cortical actin cytoskeleton organization /// 0007155 // cell adhesion /// 0032582 // negative regulation of gene-specific transcription /// 0008360 // regulation of cell shape /// 0017166 // vinculin binding" 0.786 0.671 n n n ruditapes_s32897 -1.17 0.928 0.775 0.662 n n n ruditapes_lrc38872 -1.197 0.928 transmembrane protein 14c /// 0005739 // mitochondrion /// 0016020 // membrane 0.598 0.499 n n n ruditapes2_c534 1.226 0.928 chorion peroxidase /// 0003824 // catalytic activity 0.336 0.413 n n n ruditapes_c24014 -1.271 0.928 wd repeat domain 3 0.337 0.265 n n n ruditapes_lrc32629 1.349 0.928 0.152 0.206 n n n ruditapes_s36880 1.349 0.928 coiled-coil-helix-coiled-coil-helix domain containing 3 0.152 0.206 n n n ruditapes_c16111 1.349 0.928 0.151 0.204 n n n ruditapes_c25333 1.349 0.928 0.15 0.203 n n n ruditapes2_c1366 1.349 0.928 heat shock protein 0.149 0.201 n n n ruditapes_c15996 -1.334 0.928 0.241 0.18 n n n ruditapes_c23343 -1.334 0.928 0.236 0.177 n n n ruditapes_c27356 -1.483 0.928 0.133 0.09 n n n ruditapes_c13384 -1.043 0.929 12.73 12.201 n n n ruditapes_c5512 -1.051 0.929 8.654 8.231 n n n ruditapes_lrc19861 -1.056 0.929 7.196 6.815 n n n ruditapes2_c891 1.058 0.929 3.901 4.126 n n n ruditapes_c883 -1.085 0.929 ribosomal protein s13 /// 0006414 // translational elongation /// 0040007 // growth /// 0002119 // nematode larval development /// 0005730 // nucleolus /// 0000003 // reproduction /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing /// 0009792 // embryonic development ending in birth or egg hatching 2.994 2.76 n n n ruditapes_c15066 1.109 0.929 1.24 1.375 n n n ruditapes2_c2967 -1.146 0.929 1.014 0.885 n n n ruditapes_c26282 1.145 0.929 0.736 0.843 n n n ruditapes_c10008 -1.17 0.929 0.752 0.642 n n n ruditapes_c17591 -1.177 0.929 0.713 0.606 n n n ruditapes2_c1071 -1.177 0.929 0.704 0.598 n n n ruditapes_c20436 -1.177 0.929 0.702 0.596 n n n ruditapes_c13576 -1.186 0.929 large homolog 2 /// 0005624 // membrane fraction /// 0030054 // cell junction /// 0045211 // postsynaptic membrane /// 0005515 // protein binding /// 0009986 // cell surface /// 0005887 // integral to plasma membrane /// 0007165 // signal transduction /// 0004385 // guanylate kinase activity 0.649 0.547 n n n ruditapes_lrc12637 -1.186 0.929 0.647 0.546 n n n ruditapes_c26187 1.199 0.929 0.414 0.496 n n n ruditapes_c14836 1.221 0.929 0.343 0.418 n n n ruditapes_c13359 -1.213 0.929 0.506 0.417 n n n ruditapes_lrc34165 1.237 0.929 ubiquinol-cytochrome c complex iii subunit vii /// 0005739 // mitochondrion /// 0016020 // membrane 0.3 0.371 n n n ruditapes_c21092 -1.271 0.929 transposase 0.331 0.261 n n n ruditapes_c8524 -1.271 0.929 0.33 0.26 n n n ruditapes_lrc38549 -1.271 0.929 macrophage migration inhibitory factor 2 0.326 0.257 n n n ruditapes_c14638 1.349 0.929 0.147 0.198 n n n ruditapes_c15366 1.349 0.929 0.144 0.195 n n n ruditapes_c9590 -1.334 0.929 0.234 0.175 n n n ruditapes_c9467 -1.334 0.929 predicted protein [Nematostella vectensis] 0.229 0.172 n n n ruditapes_c15933 -1.483 0.929 0.132 0.089 n n n ruditapes_c14269 -1.483 0.929 0.129 0.087 n n n ruditapes_c30140 -1.483 0.929 clca1 partial 0.129 0.087 n n n ruditapes_s34089 -1.483 0.929 rbx1 protein /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process 0.129 0.087 n n n ruditapes_c31611 -2.224 0.929 c1q and tumor necrosis factor related protein 4 0.039 0.017 n y n ruditapes2_c858 -2.224 0.929 heat shock protein 22 isoform 2 0.038 0.017 n y n ruditapes_c25219 -1.043 0.93 13.04 12.508 n n n ruditapes_c31895 1.038 0.93 centrosomal protein 164kda 7.813 8.11 n n n ruditapes_c7265 1.041 0.93 6.792 7.072 n n n ruditapes2_c703 1.067 0.93 aldolase 2.931 3.127 n n n ruditapes_c2566 -1.086 0.93 2.813 2.59 n n n ruditapes2_c3032 -1.088 0.93 rna binding motif protein 42 /// 0003676 // nucleic acid binding 2.661 2.445 n n n ruditapes_c24500 -1.094 0.93 2.382 2.178 n n n ruditapes_c23734 1.083 0.93 1.999 2.164 n n n ruditapes_c16983 -1.095 0.93 2.264 2.067 n n n ruditapes_c8044 1.095 0.93 1.547 1.694 n n n ruditapes_c18654 -1.112 0.93 1.664 1.497 n n n ruditapes_c21528 -1.112 0.93 1.657 1.49 n n n ruditapes_c23786 1.124 0.93 Conserved hypothetical protein [Leptospirillum sp. Group II '5-way CG'] 0.957 1.076 n n n ruditapes_c34409 1.137 0.93 sperm associated antigen 8 /// 0044464 // cell part 0.785 0.892 n n n ruditapes_c17553 -1.156 0.93 tkl family protein kinase /// 0016301 // kinase activity 0.86 0.743 n n n ruditapes_c25094 1.169 0.93 0.536 0.626 n n n ruditapes_c13704 1.169 0.93 0.533 0.623 n n n ruditapes_c19067 -1.197 0.93 0.566 0.473 n n n ruditapes_c24519 -1.213 0.93 0.49 0.404 n n n ruditapes_s38650 -1.213 0.93 glutathione s-transferase /// 0005515 // protein binding 0.486 0.401 n n n ruditapes_lrc11795 -1.235 0.93 0.41 0.332 n n n ruditapes_lrc34290 1.259 0.93 macrophage migration inhibitory factor 2 0.243 0.306 n n n ruditapes_c21198 -1.271 0.93 PREDICTED: similar to CG5937-PA [Apis mellifera] 0.323 0.254 n n n ruditapes_lrc36743 1.349 0.93 protein kinase c inhibitor aswz variant 5 /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0.142 0.191 n n n ruditapes_c13738 -1.334 0.93 endonuclease reverse transcriptase 0.228 0.171 n n n ruditapes_c21204 -1.334 0.93 0.226 0.17 n n n ruditapes_c8852 -1.334 0.93 0.225 0.168 n n n ruditapes_c18838 -1.334 0.93 queuine trna-ribosyltransferase 1 (trna-guanine transglycosylase) /// 0008616 // queuosine biosynthetic process /// 0008270 // zinc ion binding /// 0008479 // queuine tRNA-ribosyltransferase activity 0.223 0.167 n n n ruditapes_c11032 -1.483 0.93 0.126 0.085 n n n ruditapes_lrc37795 -1.483 0.93 0.126 0.085 n n n ruditapes_c8037 -2.224 0.93 hypothetical protein BRAFLDRAFT_74515 [Branchiostoma floridae] 0.038 0.017 n y n ruditapes2_lrc4956 -1.036 0.931 ribosomal protein l23 /// 0006414 // translational elongation /// 0006610 // ribosomal protein import into nucleus /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0003735 // structural constituent of ribosome 18.234 17.592 n n n ruditapes_c29261 1.029 0.931 11.662 12.001 n n n ruditapes_c16305 -1.062 0.931 5.354 5.039 n n n ruditapes_c9523 1.056 0.931 3.914 4.133 n n n ruditapes2_c2901 1.066 0.931 PREDICTED: hypothetical protein [Strongylocentrotus purpuratus] 2.892 3.082 n n n ruditapes2_c353 1.07 0.931 gm2 activator protein /// 0044238 // primary metabolic process /// 0044464 // cell part 2.68 2.866 n n n ruditapes_c11960 1.076 0.931 loc407663 protein 2.246 2.417 n n n ruditapes_c10742 -1.093 0.931 2.341 2.142 n n n ruditapes_c31622 -1.094 0.931 2.292 2.096 n n n ruditapes_c25138 -1.098 0.931 transcription factor-like protein 4 isoform 2 "/// 0003700 // transcription factor activity /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0008134 // transcription factor binding /// 0045892 // negative regulation of transcription, DNA-dependent /// 0042803 // protein homodimerization activity /// 0006913 // nucleocytoplasmic transport" 2.095 1.908 n n n ruditapes_lrc14599 -1.112 0.931 1.628 1.464 n n n ruditapes_c9805 -1.112 0.931 endo-beta- -glucanase 1.584 1.425 n n n ruditapes_c8756 1.124 0.931 0.924 1.039 n n n ruditapes_c14593 -1.148 0.931 aspartate aminotransferase "/// 0016769 // transferase activity, transferring nitrogenous groups" 0.933 0.812 n n n ruditapes_c21216 1.149 0.931 0.656 0.754 n n n ruditapes_c28649 -1.16 0.931 0.815 0.702 n n n ruditapes_c13263 1.156 0.931 0.597 0.69 n n n ruditapes_c22148 -1.177 0.931 0.668 0.567 n n n ruditapes_c18115 -1.213 0.931 0.482 0.398 n n n ruditapes_s38829 -1.213 0.931 dynein light chain cytoplasmic /// 0030286 // dynein complex /// 0002119 // nematode larval development /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0016459 // myosin complex /// 0005634 // nucleus /// 0043186 // P granule /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0046907 // intracellular transport /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007017 // microtubule-based process 0.478 0.394 n n n ruditapes_c25181 1.237 0.931 0.278 0.344 n n n ruditapes_c30031 1.237 0.931 0.278 0.344 n n n ruditapes_c30053 -1.235 0.931 0.393 0.318 n n n ruditapes2_c1213 -1.271 0.931 0.31 0.244 n n n ruditapes_c25124 -1.271 0.931 0.309 0.243 n n n ruditapes2_lrc5034 1.349 0.931 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.139 0.188 n n n ruditapes_c26868 1.349 0.931 PREDICTED: hypothetical protein [Rattus norvegicus] 0.137 0.184 n n n ruditapes_c12836 -1.39 0.931 fibropellin ia 0.172 0.124 n n n ruditapes_c10707 -2.224 0.931 0.036 0.016 n y n ruditapes2_lrc4077 -1.039 0.932 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 14.949 14.387 n n n ruditapes_c7668 1.038 0.932 7.433 7.716 n n n ruditapes_c25258 1.044 0.932 5.909 6.166 n n n ruditapes_c10450 -1.064 0.932 4.944 4.646 n n n ruditapes_c13795 -1.073 0.932 potassium channel tetramerisation domain containing 7 /// 0016021 // integral to membrane 3.795 3.538 n n n ruditapes2_c1800 -1.077 0.932 proteasome subunit alpha type-7 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 3.316 3.079 n n n ruditapes2_c2577 1.066 0.932 2.864 3.052 n n n ruditapes2_c1915 1.089 0.932 1.652 1.799 n n n ruditapes_c12093 -1.112 0.932 chromosome 10 open reading frame 53 1.563 1.405 n n n ruditapes_c15791 -1.112 0.932 ffr protein /// 0005794 // Golgi apparatus /// 0015031 // protein transport /// 0048193 // Golgi vesicle transport /// 0005634 // nucleus /// 0044241 // lipid digestion /// 0016021 // integral to membrane /// 0006869 // lipid transport /// 0007030 // Golgi organization 1.558 1.401 n n n ruditapes_c13672 -1.17 0.932 0.699 0.597 n n n ruditapes_c11901 -1.197 0.932 0.538 0.449 n n n ruditapes_lrc34553 -1.197 0.932 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.524 0.438 n n n ruditapes_c746 1.237 0.932 0.274 0.339 n n n ruditapes_c1798 -1.251 0.932 sarcoplasmic calcium-binding protein 0.35 0.28 n n n ruditapes2_lrc5186 1.349 0.932 xotch protein - african clawed frog 0.135 0.183 n n n ruditapes_lrc24328 1.349 0.932 tropomyosin 0.135 0.182 n n n ruditapes2_c1502 1.349 0.932 0.133 0.179 n n n ruditapes_c18207 1.349 0.932 0.133 0.179 n n n ruditapes_c8502 -1.334 0.932 0.212 0.159 n n n ruditapes_c7868 -2.224 0.932 0.036 0.016 n y n ruditapes2_c3083 -2.224 0.932 hemagglutinin amebocyte aggregation factor precursor 0.035 0.016 n y n ruditapes_c7226 1.036 0.933 hydroxysteroid (17-beta) dehydrogenase 10 /// 0008033 // tRNA processing /// 0055114 // oxidation reduction /// 0047015 // 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity /// 0005886 // plasma membrane /// 0006629 // lipid metabolic process /// 0005515 // protein binding /// 0003857 // 3-hydroxyacyl-CoA dehydrogenase activity /// 0008709 // 7-alpha-hydroxysteroid dehydrogenase activity /// 0005743 // mitochondrial inner membrane /// 0005783 // endoplasmic reticulum 7.614 7.892 n n n ruditapes_c7157 -1.075 0.933 homolog precursor 3.459 3.218 n n n ruditapes2_lrc5569 1.102 0.933 1.266 1.394 n n n ruditapes_c31305 -1.112 0.933 1.534 1.38 n n n ruditapes_c5314 -1.112 0.933 1.525 1.371 n n n ruditapes_c16030 -1.15 0.933 0.851 0.74 n n n ruditapes_c29920 -1.153 0.933 n-acetyltransferase 9 /// 0043234 // protein complex /// 0008415 // acyltransferase activity 0.817 0.709 n n n ruditapes_c13426 1.149 0.933 0.613 0.705 n n n ruditapes_lrc36621 -1.16 0.933 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.752 0.648 n n n ruditapes_c10374 -1.186 0.933 0.578 0.487 n n n ruditapes_c13772 -1.213 0.933 0.451 0.372 n n n ruditapes_c6210 -1.235 0.933 chromosome 17 open reading frame 37 0.376 0.304 n n n ruditapes_c30734 -1.271 0.933 0.297 0.234 n n n ruditapes2_c2936 -1.271 0.933 0.291 0.229 n n n ruditapes_c13817 1.349 0.933 heat shock 70kda protein 12a 0.132 0.178 n n n ruditapes2_c3621 1.349 0.933 0.131 0.177 n n n ruditapes_c18628 1.349 0.933 0.129 0.174 n n n ruditapes_c9626 -1.483 0.933 0.116 0.078 n n n ruditapes_c31934 -2.224 0.933 0.035 0.016 n y n ruditapes_c8940 1.02 0.934 18.492 18.868 n n n ruditapes_c3550 -1.064 0.934 4.725 4.443 n n n ruditapes_c8096 -1.064 0.934 4.589 4.311 n n n ruditapes_c24292 -1.079 0.934 3.029 2.808 n n n ruditapes2_c4464 -1.087 0.934 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 2.421 2.227 n n n ruditapes_c9184 1.076 0.934 2.053 2.209 n n n ruditapes2_c1808 -1.09 0.934 hephaestin 2.283 2.094 n n n ruditapes_c19034 -1.093 0.934 2.102 1.923 n n n ruditapes_c31854 1.096 0.934 1.349 1.478 n n n ruditapes_c12317 -1.112 0.934 1.446 1.3 n n n ruditapes_c17244 1.107 0.934 1.112 1.23 n n n ruditapes_c10412 -1.17 0.934 novel protein vertebrate interferon-induced protein 44 0.648 0.553 n n n ruditapes2_c2529 1.199 0.934 0.352 0.422 n n n ruditapes_c17250 -1.197 0.934 0.501 0.418 n n n ruditapes2_c3022 -1.235 0.934 0.37 0.299 n n n ruditapes_lrc33643 1.349 0.934 protein 0.126 0.17 n n n ruditapes_c25323 -1.334 0.934 0.203 0.152 n n n ruditapes_c1676 -1.334 0.934 0.199 0.149 n n n ruditapes_c26815 -1.483 0.934 phytanoyl- dioxygenase 0.113 0.076 n n n ruditapes_c551 1.799 0.934 elegans protein partially confirmed by transcript evidence 0.03 0.054 n y n ruditapes_c28800 -1.027 0.935 34.188 33.288 n n n ruditapes2_c2530 1.028 0.935 novel protein 11.186 11.497 n n n ruditapes_c14002 1.04 0.935 6.211 6.458 n n n ruditapes_c25594 1.043 0.935 5.434 5.666 n n n ruditapes_c5340 1.054 0.935 3.723 3.923 n n n ruditapes_c26508 1.056 0.935 3.514 3.71 n n n ruditapes_c29076 -1.074 0.935 3.377 3.145 n n n ruditapes_c28202 -1.078 0.935 2.901 2.691 n n n ruditapes_lrc30074 1.071 0.935 2.244 2.404 n n n ruditapes_c28903 -1.087 0.935 2.377 2.186 n n n ruditapes_c1193 -1.088 0.935 2.309 2.122 n n n ruditapes_c11589 1.079 0.935 1.885 2.034 n n n ruditapes_c29066 1.079 0.935 1.88 2.029 n n n ruditapes_c7923 -1.094 0.935 2.008 1.836 n n n ruditapes_c3750 -1.095 0.935 hypotherical protein /// 0040010 // positive regulation of growth rate /// 0009792 // embryonic development ending in birth or egg hatching 1.97 1.799 n n n ruditapes_c8193 -1.097 0.935 1.897 1.729 n n n ruditapes_lrc17660 -1.112 0.935 1.444 1.299 n n n ruditapes_c22627 -1.112 0.935 1.442 1.297 n n n ruditapes_c19986 -1.112 0.935 threonyl-trna synthetase "/// 0044238 // primary metabolic process /// 0016876 // ligase activity, forming aminoacyl-tRNA and related compounds /// 0034960 // cellular biopolymer metabolic process" 1.43 1.286 n n n ruditapes_c9009 1.104 0.935 1.134 1.252 n n n ruditapes_c19091 1.107 0.935 1.084 1.2 n n n ruditapes_c20779 1.107 0.935 1.081 1.197 n n n ruditapes_c9947 -1.142 0.935 0.885 0.775 n n n ruditapes2_lrc3965 -1.177 0.935 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 0.586 0.498 n n n ruditapes_c30202 -1.213 0.935 0.422 0.348 n n n ruditapes_c10266 1.221 0.935 protein isoform 2 0.285 0.347 n n n ruditapes_c18403 1.237 0.935 0.249 0.307 n n n ruditapes_c17120 -1.235 0.935 0.351 0.284 n n n ruditapes2_c2726 -1.271 0.935 0.277 0.218 n n n ruditapes_c27545 1.349 0.935 0.121 0.164 n n n ruditapes2_lrc4885 -1.334 0.935 ribosomal protein l21 /// 0006414 // translational elongation /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.195 0.146 n n n ruditapes_lrc32367 -1.483 0.935 calmodulin /// 0005524 // ATP binding /// 0042981 // regulation of apoptosis /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0005634 // nucleus /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0004721 // phosphoprotein phosphatase activity /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0008270 // zinc ion binding /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0005506 // iron ion binding /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0043388 // positive regulation of DNA binding /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 0.11 0.074 n n n ruditapes_lrc34062 -1.483 0.935 0.109 0.074 n n n ruditapes_c9062 1.028 0.936 10.81 11.111 n n n ruditapes2_c2894 -1.082 0.936 2.615 2.417 n n n ruditapes2_c1091 1.081 0.936 1.73 1.871 n n n ruditapes2_c2171 1.102 0.936 1.131 1.247 n n n ruditapes2_c1144 -1.112 0.936 1.382 1.243 n n n ruditapes_c11261 1.109 0.936 #NAME? "/// 0046622 // positive regulation of organ growth /// 0006355 // regulation of transcription, DNA-dependent /// 0003700 // transcription factor activity /// 0043565 // sequence-specific DNA binding /// 0008284 // positive regulation of cell proliferation /// 0048484 // enteric nervous system development /// 0005730 // nucleolus /// 0001889 // liver development /// 0045629 // negative regulation of T-helper 2 cell differentiation /// 0045627 // positive regulation of T-helper 1 cell differentiation /// 0005737 // cytoplasm /// 0007519 // skeletal muscle tissue development /// 0048558 // embryonic gut morphogenesis" 1.013 1.123 n n n ruditapes_c16011 1.124 0.936 0.793 0.892 n n n ruditapes_c4930 1.137 0.936 phosphonoacetaldehyde hydrolase /// 0003824 // catalytic activity 0.668 0.76 n n n ruditapes2_c916 -1.146 0.936 dead h (asp-glu-ala-asp his) box polypeptide rig- partial 0.831 0.725 n n n ruditapes_lrc35350 -1.146 0.936 nucleoside diphosphate kinase "/// 0005524 // ATP binding /// 0007427 // epithelial cell migration, open tracheal system /// 0005525 // GTP binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0005880 // nuclear microtubule /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006165 // nucleoside diphosphate phosphorylation /// 0006228 // UTP biosynthetic process /// 0008017 // microtubule binding /// 0018105 // peptidyl-serine phosphorylation /// 0046777 // protein amino acid autophosphorylation /// 0007067 // mitosis /// 0007017 // microtubule-based process" 0.82 0.716 n n n ruditapes_c17285 1.156 0.936 line-1 reverse transcriptase homolog 0.524 0.606 n n n ruditapes2_c2989 -1.17 0.936 nadh-ubiquinone oxidoreductase 20 kda subunit "/// 0006810 // transport /// 0022900 // electron transport chain /// 0005739 // mitochondrion /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0051539 // 4 iron, 4 sulfur cluster binding /// 0005506 // iron ion binding" 0.612 0.523 n n n ruditapes2_lrc7420 -1.177 0.936 cysteine protease inhibitor 0.579 0.492 n n n ruditapes2_lrc5652 1.18 0.936 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.401 0.473 n n n ruditapes_c19079 1.199 0.936 0.332 0.398 n n n ruditapes2_c2328 1.237 0.936 sialic acid binding lectin 0.239 0.295 n n n ruditapes_c26470 1.349 0.936 0.119 0.161 n n n ruditapes_lrc35987 -1.334 0.936 cytochrome c oxidase subunit va 0.188 0.141 n n n ruditapes_c8463 -1.483 0.936 0.107 0.072 n n n ruditapes_c2869 1.028 0.937 actin related protein 2 3 subunit 41kda /// 0044424 // intracellular part 10.525 10.815 n n n ruditapes_c21479 1.053 0.937 3.529 3.716 n n n ruditapes_c16338 -1.068 0.937 3.721 3.483 n n n ruditapes_c25511 -1.076 0.937 wd repeat domain 21 2.975 2.765 n n n ruditapes_c29616 -1.112 0.937 1.349 1.214 n n n ruditapes_c8565 -1.112 0.937 hd domain containing 2 /// 0003824 // catalytic activity 1.336 1.202 n n n ruditapes_c5219 -1.112 0.937 hypothetical protein BRAFLDRAFT_220632 [Branchiostoma floridae] 1.325 1.192 n n n ruditapes_c21522 1.109 0.937 0.964 1.069 n n n ruditapes_c36864 1.124 0.937 alkaline phosphatase 0.776 0.873 n n n ruditapes_c8388 1.124 0.937 0.773 0.869 n n n ruditapes2_c1230 1.156 0.937 0.511 0.591 n n n ruditapes_c13415 -1.16 0.937 0.67 0.577 n n n ruditapes_c16771 1.169 0.937 0.43 0.503 n n n ruditapes_c15916 -1.186 0.937 hypothetical protein BRAFLDRAFT_128762 [Branchiostoma floridae] 0.508 0.428 n n n ruditapes2_c840 1.237 0.937 0.234 0.289 n n n ruditapes_c16574 -1.235 0.937 0.335 0.271 n n n ruditapes_c15994 -1.235 0.937 0.332 0.269 n n n ruditapes_c16270 1.349 0.937 0.117 0.158 n n n ruditapes_c28894 1.349 0.937 0.117 0.157 n n n ruditapes_lrc35724 1.349 0.937 tandem repeat galectin /// 0005634 // nucleus /// 0005488 // binding /// 0005737 // cytoplasm 0.116 0.157 n n n ruditapes2_lrc5651 1.349 0.937 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 0.116 0.156 n n n ruditapes_c17266 -1.334 0.937 0.184 0.138 n n n ruditapes_c15461 -1.334 0.937 0.181 0.136 n n n ruditapes_c15697 -1.027 0.938 30.295 29.491 n n n ruditapes_c17599 -1.059 0.938 isoform b 4.896 4.623 n n n ruditapes_c18613 -1.08 0.938 2.53 2.343 n n n ruditapes_c29909 -1.085 0.938 2.23 2.055 n n n ruditapes_c7243 1.081 0.938 1.625 1.758 n n n ruditapes_c3645 1.092 0.938 protein 1.28 1.398 n n n ruditapes_c26403 -1.112 0.938 1.297 1.166 n n n ruditapes_c12177 1.124 0.938 0.744 0.836 n n n ruditapes_c18812 1.169 0.938 coiled-coil domain containing 55 /// 0016607 // nuclear speck 0.423 0.495 n n n ruditapes_c16157 1.199 0.938 0.311 0.373 n n n ruditapes2_lrc6438 -1.197 0.938 lethal neo18 0.446 0.372 n n n ruditapes2_c975 -1.235 0.938 0.322 0.261 n n n ruditapes2_c6971 1.349 0.938 0.113 0.153 n n n ruditapes_c22029 1.349 0.938 novel protein 0.113 0.152 n n n ruditapes_c5012 1.349 0.938 hypothetical protein TTHERM_00648850 [Tetrahymena thermophila] 0.112 0.152 n n n ruditapes_c28089 -1.334 0.938 0.178 0.134 n n n ruditapes_lrc34537 -1.483 0.938 isoform cra_a 0.101 0.068 n n n ruditapes_c18659 -1.483 0.938 0.1 0.068 n n n ruditapes2_c412 -1.483 0.938 0.099 0.067 n n n ruditapes2_lrc7052 -1.483 0.938 galectin family xgalectin-iiia 0.098 0.066 n n n ruditapes2_c1782 -1.049 0.939 7.242 6.907 n n n ruditapes_c20843 1.074 0.939 angiopoietin-like 2 /// 0007275 // multicellular organismal development 1.861 1.999 n n n ruditapes_c28669 1.073 0.939 1.855 1.991 n n n ruditapes_c3443 1.096 0.939 1.153 1.264 n n n ruditapes2_c2238 -1.112 0.939 1.244 1.119 n n n ruditapes_lrc35305 1.107 0.939 transport protein sec61 subunit beta /// 0005515 // protein binding /// 0043022 // ribosome binding 0.95 1.051 n n n ruditapes2_c1820 1.124 0.939 0.718 0.807 n n n ruditapes2_c1146 -1.165 0.939 zinc finger cdgsh domain-containing protein 1 "/// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0051537 // 2 iron, 2 sulfur cluster binding" 0.594 0.51 n n n ruditapes_c15388 1.169 0.939 0.409 0.478 n n n ruditapes_c17634 -1.213 0.939 0.366 0.302 n n n ruditapes_c14828 1.349 0.939 0.108 0.146 n n n ruditapes_s39220 1.349 0.939 0.107 0.144 n n n ruditapes2_c2568 -1.483 0.939 0.096 0.065 n n n ruditapes_c29777 -1.037 0.94 13.149 12.677 n n n ruditapes_c3393 1.025 0.94 11.639 11.926 n n n ruditapes_c12888 1.034 0.94 6.908 7.141 n n n ruditapes_c842 -1.059 0.94 protein 4.52 4.266 n n n ruditapes_c20182 1.053 0.94 3.175 3.344 n n n ruditapes_c35373 -1.088 0.94 1.982 1.821 n n n ruditapes_c11510 -1.089 0.94 1.938 1.779 n n n ruditapes_c17999 -1.112 0.94 leucine- glioma inactivated 1 1.229 1.105 n n n ruditapes2_c1252 -1.112 0.94 1.209 1.087 n n n ruditapes_c17060 1.156 0.94 0.455 0.526 n n n ruditapes_c18766 1.169 0.94 0.399 0.466 n n n ruditapes_lrc15529 1.169 0.94 aspartate aminotransferase 0.396 0.463 n n n ruditapes_lrc23288 1.169 0.94 0.394 0.46 n n n ruditapes_c16658 1.169 0.94 0.388 0.454 n n n ruditapes2_lrc4655 -1.197 0.94 0.41 0.342 n n n ruditapes_c3655 1.349 0.94 0.106 0.143 n n n ruditapes_c12808 1.349 0.94 0.105 0.142 n n n ruditapes2_lrc3572 1.349 0.94 transgelin 2 0.103 0.139 n n n ruditapes_lrc9569 1.349 0.94 0.103 0.139 n n n ruditapes2_lrc3270 -1.334 0.94 cysteine protease inhibitor 0.167 0.125 n n n ruditapes_lrc35241 -1.334 0.94 0.166 0.124 n n n ruditapes_lrc7322 -1.042 0.941 9.378 8.999 n n n ruditapes_c13936 -1.051 0.941 5.947 5.656 n n n ruditapes_c21361 -1.057 0.941 4.683 4.429 n n n ruditapes_c23370 1.049 0.941 3.525 3.698 n n n ruditapes_c30405 -1.069 0.941 enhancer of yellow 2 homolog "/// 0006355 // regulation of transcription, DNA-dependent /// 0000124 // SAGA complex" 3.142 2.938 n n n ruditapes_c18107 -1.071 0.941 3.022 2.822 n n n ruditapes_c21149 1.06 0.941 2.491 2.641 n n n ruditapes_c33392 -1.073 0.941 ae-like protein 2.788 2.599 n n n ruditapes2_c206 1.061 0.941 2.416 2.563 n n n ruditapes_lrc37653 1.064 0.941 2.225 2.368 n n n ruditapes_c23331 -1.08 0.941 2.296 2.125 n n n ruditapes_c9551 1.072 0.941 1.793 1.923 n n n ruditapes_c19588 -1.086 0.941 1.969 1.813 n n n ruditapes_lrc33758 1.079 0.941 1.522 1.642 n n n ruditapes2_c2021 -1.112 0.941 1.18 1.061 n n n ruditapes2_c1157 -1.112 0.941 1.157 1.04 n n n ruditapes_lrc34022 -1.112 0.941 ribosomal protein s3 /// 0006414 // translational elongation /// 0019901 // protein kinase binding /// 0006919 // activation of caspase activity /// 0032088 // negative regulation of NF-kappaB transcription factor activity /// 0005634 // nucleus /// 0004519 // endonuclease activity /// 0006413 // translational initiation /// 0045738 // negative regulation of DNA repair /// 0003729 // mRNA binding /// 0006917 // induction of apoptosis /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0032587 // ruffle membrane /// 0051059 // NF-kappaB binding /// 0003684 // damaged DNA binding /// 0003906 // DNA-(apurinic or apyrimidinic site) lyase activity /// 0009790 // embryonic development /// 0051536 // iron-sulfur cluster binding 1.154 1.038 n n n ruditapes_lrc23588 1.124 0.941 af195094_1gamma actin-like protein /// 0005524 // ATP binding /// 0005200 // structural constituent of cytoskeleton /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0045214 // sarcomere organization /// 0030016 // myofibril 0.671 0.754 n n n ruditapes_c22643 1.169 0.941 0.385 0.45 n n n ruditapes_lrc32551 -1.197 0.941 ribosomal protein l10 0.402 0.336 n n n ruditapes2_c3804 -1.197 0.941 caveolin 3 /// 0006810 // transport /// 0007009 // plasma membrane organization /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0060035 // notochord cell development /// 0005515 // protein binding /// 0043234 // protein complex /// 0055117 // regulation of cardiac muscle contraction /// 0006469 // negative regulation of protein kinase activity /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0048523 // negative regulation of cellular process /// 0045121 // membrane raft /// 0042391 // regulation of membrane potential 0.393 0.328 n n n ruditapes_c1434 -1.213 0.941 serine protease inhibitor dipetalogastin 0.353 0.291 n n n ruditapes_c4251 -1.271 0.941 0.231 0.182 n n n ruditapes_c29727 -1.271 0.941 lrp2 binding protein /// 0005488 // binding 0.227 0.179 n n n ruditapes_c29026 -1.271 0.941 0.225 0.177 n n n ruditapes_c26072 1.349 0.941 0.102 0.138 n n n ruditapes_c20757 1.349 0.941 0.101 0.136 n n n ruditapes_lrc37625 -1.334 0.941 tandem repeat galectin 0.157 0.118 n n n ruditapes_c6147 1.023 0.942 12.498 12.78 n n n ruditapes_c20575 -1.043 0.942 8.593 8.24 n n n ruditapes_lrc32469 1.038 0.942 AF339450_1hillarin [Hirudo medicinalis] 5.323 5.524 n n n ruditapes_c13202 1.043 0.942 kiaa1394 protein 4.429 4.619 n n n ruditapes_c16487 -1.06 0.942 4.025 3.796 n n n ruditapes_c21772 1.049 0.942 3.442 3.611 n n n ruditapes2_c1031 1.051 0.942 3.148 3.31 n n n ruditapes_c18807 -1.083 0.942 dihydropyrimidine dehydrogenase /// 0017113 // dihydropyrimidine dehydrogenase (NADP+) activity /// 0050660 // FAD binding /// 0006210 // thymine catabolic process /// 0010181 // FMN binding /// 0006212 // uracil catabolic process /// 0006214 // thymidine catabolic process /// 0050661 // NADP or NADPH binding /// 0006145 // purine base catabolic process /// 0005829 // cytosol /// 0004159 // dihydrouracil dehydrogenase (NAD+) activity /// 0042803 // protein homodimerization activity 2.076 1.916 n n n ruditapes_c2928 -1.087 0.942 malic enzyme nad(+)- mitochondrial /// 0004471 // malate dehydrogenase (decarboxylating) activity /// 0005488 // binding /// 0008152 // metabolic process /// 0009055 // electron carrier activity 1.854 1.706 n n n ruditapes_c17038 -1.09 0.942 1.753 1.608 n n n ruditapes_c28533 -1.112 0.942 profilin /// 0015629 // actin cytoskeleton /// 0003779 // actin binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization 1.142 1.027 n n n ruditapes_s37865 -1.112 0.942 1.137 1.023 n n n ruditapes2_c3283 -1.112 0.942 cytochrome c oxidase subunit iv 1.117 1.005 n n n ruditapes_c19102 1.124 0.942 exosome component 8 0.656 0.737 n n n ruditapes_c14258 -1.138 0.942 complement component c3 0.76 0.668 n n n ruditapes_c30583 -1.165 0.942 0.531 0.456 n n n ruditapes_c7250 1.169 0.942 nuclear factor of kappa light polypeptide gene enhancer in b-cells p49 p100 0.374 0.437 n n n ruditapes_c24673 1.199 0.942 0.269 0.322 n n n ruditapes_c14218 -1.197 0.942 0.385 0.321 n n n ruditapes_c7508 -1.271 0.942 glutamine amidotransferase subunit pdxt 0.223 0.176 n n n ruditapes_c23145 1.349 0.942 ubiquitin carboxyl-terminal hydrolase 64e 0.098 0.132 n n n ruditapes_s39402 1.349 0.942 0.098 0.132 n n n ruditapes_c25429 -1.334 0.942 zymogen granule membrane glycoprotein 2 0.156 0.117 n n n ruditapes2_c608 -1.334 0.942 0.155 0.116 n n n ruditapes_s39059 -1.023 0.943 38.569 37.685 n n n ruditapes2_c1407 -1.034 0.943 chitinase 2 14.786 14.302 n n n ruditapes_c9384 1.034 0.943 6.23 6.444 n n n ruditapes_c20825 -1.051 0.943 chromobox homolog 7 /// 0006350 // transcription /// 0005515 // protein binding /// 0043229 // intracellular organelle /// 0000151 // ubiquitin ligase complex /// 0004842 // ubiquitin-protein ligase activity /// 0016574 // histone ubiquitination 5.612 5.339 n n n ruditapes_c17965 -1.053 0.943 5.086 4.829 n n n ruditapes_c12524 1.049 0.943 3.358 3.523 n n n ruditapes_lrc23849 1.054 0.943 nadh dehydrogenase 1 alpha subcomplex subunit 13 /// 0044237 // cellular metabolic process /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0006915 // apoptosis /// 0050794 // regulation of cellular process /// 0031966 // mitochondrial membrane 2.841 2.994 n n n ruditapes_c14278 1.055 0.943 2.754 2.906 n n n ruditapes_c30879 -1.069 0.943 2.941 2.751 n n n ruditapes_c11952 1.06 0.943 2.314 2.453 n n n ruditapes_c10596 -1.086 0.943 1.862 1.715 n n n ruditapes_c20213 -1.086 0.943 1.826 1.682 n n n ruditapes_c19635 -1.087 0.943 1.795 1.651 n n n ruditapes_c14702 1.076 0.943 1.532 1.648 n n n ruditapes_c20889 -1.088 0.943 1.754 1.611 n n n ruditapes_lrc32850 1.102 0.943 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.909 1.001 n n n ruditapes2_lrc4124 1.124 0.943 serine proteinase 0.634 0.713 n n n ruditapes_c28318 1.124 0.943 0.619 0.695 n n n ruditapes_c6387 1.156 0.943 methionine sulfoxide reductase b3 "/// 0016671 // oxidoreductase activity, acting on sulfur group of donors, disulfide as acceptor /// 0005739 // mitochondrion /// 0046872 // metal ion binding /// 0008152 // metabolic process" 0.412 0.477 n n n ruditapes_c24930 1.156 0.943 0.411 0.475 n n n ruditapes_s39617 1.169 0.943 ependymin related protein-1 0.362 0.423 n n n ruditapes_lrc38867 1.199 0.943 0.264 0.316 n n n ruditapes_lrc33391 1.199 0.943 0.263 0.316 n n n ruditapes_c7041 -1.197 0.943 0.368 0.307 n n n ruditapes_lrc35710 1.237 0.943 serine proteinase 0.192 0.237 n n n ruditapes2_c2913 -1.235 0.943 0.269 0.218 n n n ruditapes_lrc16876 1.349 0.943 0.095 0.129 n n n ruditapes_c27090 1.349 0.943 0.095 0.128 n n n ruditapes2_lrc6407 1.349 0.943 0.094 0.127 n n n ruditapes_c7203 1.349 0.943 0.093 0.126 n n n ruditapes_c9480 -1.334 0.943 0.152 0.114 n n n ruditapes2_c6088 1.024 0.944 elongation factor 1-beta /// 0006414 // translational elongation /// 0005853 // eukaryotic translation elongation factor 1 complex /// 0003746 // translation elongation factor activity 10.416 10.665 n n n ruditapes_c9714 1.039 0.944 4.716 4.903 n n n ruditapes_c19875 1.046 0.944 3.564 3.728 n n n ruditapes_c27298 1.049 0.944 3.253 3.414 n n n ruditapes_c22047 -1.062 0.944 3.494 3.288 n n n ruditapes_c2609 1.054 0.944 2.719 2.865 n n n ruditapes_c8309 1.059 0.944 2.317 2.454 n n n ruditapes_c7125 1.066 0.944 1.896 2.021 n n n ruditapes_c28225 -1.083 0.944 1.933 1.784 n n n ruditapes_c5457 1.079 0.944 1.392 1.502 n n n ruditapes_c9207 1.099 0.944 glutathione s-transferase 0.918 1.009 n n n ruditapes_c3495 -1.112 0.944 1.065 0.958 n n n ruditapes_c18618 -1.112 0.944 hypothetical protein BVAVS116_N0017 [Borrelia valaisiana VS116] 1.059 0.952 n n n ruditapes_c13147 -1.112 0.944 1.055 0.949 n n n ruditapes_c25971 1.104 0.944 0.842 0.929 n n n ruditapes2_c4206 1.149 0.944 0.44 0.505 n n n ruditapes_lrc34265 1.169 0.944 activating transcription factor 4 /// 0016563 // transcription activator activity /// 0050811 // GABA receptor binding /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0003704 // specific RNA polymerase II transcription factor activity /// 0003677 // DNA binding /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0008022 // protein C-terminus binding /// 0006094 // gluconeogenesis 0.339 0.396 n n n ruditapes_c22361 1.199 0.944 0.253 0.303 n n n ruditapes_c21126 1.349 0.944 0.092 0.123 n n n ruditapes_c19608 1.349 0.944 0.091 0.123 n n n ruditapes2_c81 -1.334 0.944 achain methionine core mutant of t4 lysozyme 0.143 0.107 n n n ruditapes_c7534 -1.483 0.944 0.081 0.055 n n n ruditapes_c9013 -1.483 0.944 solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter) member 6 /// 0005769 // early endosome /// 0001504 // neurotransmitter uptake /// 0008021 // synaptic vesicle /// 0016020 // membrane /// 0007601 // visual perception /// 0005313 // L-glutamate transmembrane transporter activity 0.08 0.054 n n n ruditapes_c13504 -1.028 0.945 21.856 21.256 n n n ruditapes2_c2153 1.03 0.945 7.098 7.313 n n n ruditapes2_c1355 -1.048 0.945 6.077 5.798 n n n ruditapes_c28542 -1.05 0.945 5.361 5.104 n n n ruditapes_c5874 1.04 0.945 4.446 4.624 n n n ruditapes_lrc32262 -1.053 0.945 small nuclear ribonucleoprotein sm d2 "/// 0005681 // spliceosomal complex /// 0003676 // nucleic acid binding /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0000398 // nuclear mRNA splicing, via spliceosome /// 0007052 // mitotic spindle organization" 4.768 4.527 n n n ruditapes2_c1173 -1.053 0.945 4.728 4.489 n n n ruditapes_c16679 1.041 0.945 mannose-6-phosphate receptor binding domain-containing protein 4.094 4.263 n n n ruditapes_c12406 -1.059 0.945 3.85 3.636 n n n ruditapes_lrc23864 1.049 0.945 3.116 3.27 n n n ruditapes_c1419 -1.077 0.945 malic enzyme "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005488 // binding /// 0008152 // metabolic process" 2.152 1.998 n n n ruditapes2_lrc3941 -1.078 0.945 cellular retinoic acid binding protein 2.111 1.958 n n n ruditapes2_c1318 1.085 0.945 alpha beta hydrolase fold-3 domain protein 1.178 1.279 n n n ruditapes_c2853 -1.112 0.945 ependymin-related protein 1.025 0.922 n n n ruditapes_c8497 -1.112 0.945 1.013 0.911 n n n ruditapes_c14081 -1.112 0.945 myeloma overexpressed 2 1.001 0.901 n n n ruditapes_c5511 1.124 0.945 0.596 0.67 n n n ruditapes_s39455 1.124 0.945 0.578 0.65 n n n ruditapes2_c1870 1.149 0.945 chromosome 7 open reading frame 36 0.411 0.472 n n n ruditapes_c2201 1.18 0.945 0.29 0.342 n n n ruditapes_c20245 1.199 0.945 0.246 0.295 n n n ruditapes_c20380 1.199 0.945 0.246 0.295 n n n ruditapes_lrc33280 -1.271 0.945 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle 0.197 0.155 n n n ruditapes_c12202 1.349 0.945 0.089 0.12 n n n ruditapes_c12805 1.349 0.945 0.089 0.119 n n n ruditapes_c23306 1.349 0.945 0.089 0.119 n n n ruditapes2_c5612 1.349 0.945 0.087 0.117 n n n ruditapes_c8295 -1.483 0.945 mucin-like peritrophin 0.077 0.052 n n n ruditapes_s38074 1.01 0.946 60s ribosomal protein l9 31.28 31.601 n n n ruditapes_c14368 1.024 0.946 9.885 10.123 n n n ruditapes_lrc15031 1.024 0.946 9.802 10.039 n n n ruditapes_c19164 1.03 0.946 6.772 6.976 n n n ruditapes_c1048 1.033 0.946 5.884 6.079 n n n ruditapes_c21330 -1.046 0.946 6.293 6.014 n n n ruditapes_c25157 1.045 0.946 3.512 3.671 n n n ruditapes_c20042 -1.058 0.946 3.829 3.618 n n n ruditapes_c7920 1.049 0.946 2.956 3.102 n n n ruditapes2_c3568 -1.072 0.946 achain control of enzyme activity by an engineered disulfide bond 2.443 2.279 n n n ruditapes_c28143 -1.08 0.946 1.918 1.775 n n n ruditapes_lrc36571 1.083 0.946 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 1.167 1.264 n n n ruditapes2_c2554 1.092 0.946 0.983 1.074 n n n ruditapes_c7906 1.092 0.946 0.982 1.072 n n n ruditapes_c11432 1.092 0.946 corticotropin releasing hormone binding protein 0.973 1.062 n n n ruditapes_c16288 1.099 0.946 peptidylprolyl isomerase -like 6 0.844 0.928 n n n ruditapes_c22725 -1.112 0.946 0.997 0.897 n n n ruditapes_c26580 -1.112 0.946 0.992 0.892 n n n ruditapes_c11985 -1.112 0.946 0.987 0.888 n n n ruditapes_c15924 -1.112 0.946 0.975 0.877 n n n ruditapes2_c2374 -1.112 0.946 conserved hypothetical protein [Culex quinquefasciatus] 0.973 0.875 n n n ruditapes_c29352 1.124 0.946 0.563 0.633 n n n ruditapes_c24624 1.124 0.946 0.56 0.629 n n n ruditapes_c25749 1.124 0.946 thrombospondin type-1 domain-containing protein 7b 0.557 0.626 n n n ruditapes_c14921 1.169 0.946 0.323 0.377 n n n ruditapes_c1401 -1.17 0.946 0.439 0.375 n n n ruditapes_c13617 1.199 0.946 0.238 0.286 n n n ruditapes2_lrc5920 1.349 0.946 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0040007 // growth /// 0002119 // nematode larval development /// 0009792 // embryonic development ending in birth or egg hatching 0.086 0.116 n n n ruditapes_c18496 1.349 0.946 0.086 0.115 n n n ruditapes_c21278 1.349 0.946 0.085 0.115 n n n ruditapes_c15264 1.349 0.946 0.085 0.114 n n n ruditapes_c16688 1.349 0.946 0.085 0.114 n n n ruditapes_lrc35122 1.349 0.946 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0.085 0.114 n n n ruditapes_lrc36440 1.349 0.946 serine proteinase 0.085 0.114 n n n ruditapes_c13518 1.349 0.946 0.084 0.113 n n n ruditapes_c15763 1.349 0.946 0.084 0.113 n n n ruditapes_c31085 1.349 0.946 predicted protein [Nematostella vectensis] 0.084 0.113 n n n ruditapes_c17578 1.349 0.946 0.083 0.112 n n n ruditapes_c27324 1.349 0.946 0.083 0.112 n n n ruditapes_lrc35271 1.349 0.946 0.083 0.112 n n n ruditapes2_lrc4216 -1.483 0.946 complement c1q-like protein 4 precursor 0.074 0.05 n n n ruditapes2_c3138 -1.031 0.947 15.556 15.082 n n n ruditapes_c19946 -1.04 0.947 8.655 8.322 n n n ruditapes_c30831 1.029 0.947 6.83 7.028 n n n ruditapes_c5901 -1.044 0.947 transport protein sec61 subunit beta "/// 0006616 // SRP-dependent cotranslational protein targeting to membrane, translocation /// 0008565 // protein transporter activity /// 0005784 // translocon complex" 6.932 6.641 n n n ruditapes_c12701 1.032 0.947 5.865 6.053 n n n ruditapes_c12528 -1.051 0.947 5.002 4.76 n n n ruditapes_c26339 1.041 0.947 3.904 4.065 n n n ruditapes_lrc13123 1.041 0.947 3.866 4.026 n n n ruditapes_c31563 -1.057 0.947 growth arrest and dna-damage-inducible alpha-like protein 3.894 3.685 n n n ruditapes_c13349 -1.06 0.947 3.426 3.231 n n n ruditapes_c22028 -1.069 0.947 2.523 2.36 n n n ruditapes_c16056 1.058 0.947 2.117 2.24 n n n ruditapes2_c187 -1.081 0.947 1.791 1.656 n n n ruditapes_c16322 -1.083 0.947 1.752 1.618 n n n ruditapes_c22356 1.079 0.947 1.227 1.324 n n n ruditapes_c28814 -1.092 0.947 1.389 1.272 n n n ruditapes_c15477 1.096 0.947 0.885 0.971 n n n ruditapes_c24273 1.102 0.947 cg2010 cg2010-pa 0.796 0.878 n n n ruditapes_c3014 -1.112 0.947 deleted in malignant brain tumors 1 /// 0044464 // cell part 0.956 0.859 n n n ruditapes_c4097 -1.112 0.947 0.954 0.858 n n n ruditapes_c31923 -1.112 0.947 0.935 0.841 n n n ruditapes_c30538 1.124 0.947 0.534 0.6 n n n ruditapes_lrc33834 1.199 0.947 kallikrein plasma (fletcher factor) 1 /// 0008236 // serine-type peptidase activity /// 0006508 // proteolysis /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0006954 // inflammatory response /// 0005737 // cytoplasm 0.231 0.276 n n n ruditapes_c17558 1.199 0.947 0.23 0.275 n n n ruditapes_c26765 1.199 0.947 zinc finger protein 271 (zinc finger protein 7) (zinc finger protein znfphex133) (epstein-barr virus-induced zinc finger protein) (znf-eb) (ct-zfp48) (zinc finger protein dp) (znf-dp) /// 0005488 // binding /// 0005737 // cytoplasm 0.228 0.273 n n n ruditapes_s36002 1.199 0.947 nadh dehydrogenase subunit 1 /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0016021 // integral to membrane 0.224 0.268 n n n ruditapes2_c1261 1.237 0.947 superoxide dismutase 0.165 0.204 n n n ruditapes2_c1927 1.237 0.947 scavenger receptor cysteine-rich protein type 12 precursor 0.163 0.202 n n n ruditapes_c11870 1.349 0.947 0.083 0.112 n n n ruditapes_c13420 1.349 0.947 0.083 0.112 n n n ruditapes_s40180 1.349 0.947 translocator protein 0.083 0.112 n n n ruditapes_c16032 1.349 0.947 0.082 0.111 n n n ruditapes_c18942 1.349 0.947 0.082 0.111 n n n ruditapes_c6995 1.349 0.947 0.082 0.111 n n n ruditapes_c7941 1.349 0.947 0.082 0.111 n n n ruditapes_c9420 1.349 0.947 0.082 0.111 n n n ruditapes_s37443 1.349 0.947 ependymin related protein-1 precursor 0.082 0.111 n n n ruditapes_s37554 1.349 0.947 0.082 0.111 n n n ruditapes_s39722 1.349 0.947 0.082 0.11 n n n ruditapes_c20452 1.349 0.947 0.081 0.11 n n n ruditapes_c20345 1.349 0.947 0.081 0.109 n n n ruditapes_c30706 1.349 0.947 0.081 0.109 n n n ruditapes_c11639 1.349 0.947 0.08 0.108 n n n ruditapes_c4017 1.349 0.947 0.08 0.108 n n n ruditapes2_c1033 -1.483 0.947 vitelline membrane outer layer 1 homolog 0.072 0.049 n n n ruditapes_c3769 1.007 0.948 44.834 45.151 n n n ruditapes2_c1605 -1.032 0.948 14.814 14.361 n n n ruditapes_lrc33792 1.032 0.948 5.74 5.925 n n n ruditapes_c14271 1.049 0.948 2.795 2.932 n n n ruditapes_c27253 1.049 0.948 2.789 2.927 n n n ruditapes_c4911 1.057 0.948 transmembrane protein 85 /// 0016020 // membrane 2.121 2.243 n n n ruditapes_c28003 1.068 0.948 1.557 1.663 n n n ruditapes_c9463 -1.085 0.948 1.585 1.461 n n n ruditapes_c31317 -1.088 0.948 glyoxalase domain containing 4 /// 0005739 // mitochondrion 1.477 1.358 n n n ruditapes_c17697 -1.112 0.948 0.928 0.834 n n n ruditapes_c8571 -1.112 0.948 0.906 0.815 n n n ruditapes_c19811 -1.112 0.948 thioredoxin-like protein 4a "/// 0000245 // spliceosome assembly /// 0051301 // cell division /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0005682 // U5 snRNP /// 0005737 // cytoplasm /// 0007067 // mitosis" 0.903 0.812 n n n ruditapes_c21337 -1.112 0.948 0.898 0.807 n n n ruditapes_c7409 -1.112 0.948 peptidoglycan-recognition protein precursor 0.894 0.804 n n n ruditapes_lrc32472 1.124 0.948 0.527 0.593 n n n ruditapes_c29175 1.124 0.948 0.522 0.587 n n n ruditapes_c7386 1.124 0.948 hypothetical protein BRAFLDRAFT_265259 [Branchiostoma floridae] 0.518 0.583 n n n ruditapes2_c1127 1.156 0.948 0.345 0.399 n n n ruditapes2_lrc5887 1.169 0.948 0.292 0.341 n n n ruditapes_c9672 1.199 0.948 0.223 0.267 n n n ruditapes2_lrc5676 1.199 0.948 type alpha 1 0.215 0.258 n n n ruditapes_c11760 1.349 0.948 0.079 0.107 n n n ruditapes_c19705 1.349 0.948 0.079 0.107 n n n ruditapes2_lrc4931 1.349 0.948 cathepsin l 0.079 0.106 n n n ruditapes_s37102 1.349 0.948 ndufa13 protein 0.079 0.106 n n n ruditapes2_lrc5214 1.349 0.948 chromosome 4 open reading frame 34 /// 0016020 // membrane /// 0005515 // protein binding 0.078 0.105 n n n ruditapes_s36509 1.349 0.948 0.077 0.104 n n n ruditapes2_c435 -1.483 0.948 complement component q subcomponent-like 2 0.07 0.048 n n n ruditapes_c23204 1.025 0.949 7.985 8.188 n n n ruditapes_c25280 1.029 0.949 6.204 6.386 n n n ruditapes_c15922 -1.045 0.949 5.959 5.703 n n n ruditapes_c25287 -1.06 0.949 3.126 2.949 n n n ruditapes2_c1135 1.06 0.949 1.907 2.022 n n n ruditapes_c24476 -1.072 0.949 2.105 1.963 n n n ruditapes_c18023 -1.074 0.949 2.097 1.954 n n n ruditapes_c15036 1.061 0.949 1.816 1.927 n n n ruditapes_c8799 -1.078 0.949 1.845 1.712 n n n ruditapes_c2433 1.071 0.949 1.415 1.515 n n n ruditapes_c16034 1.074 0.949 1.293 1.389 n n n ruditapes_lrc36792 1.079 0.949 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 1.138 1.228 n n n ruditapes_s39383 1.099 0.949 0.752 0.827 n n n ruditapes_c7767 -1.112 0.949 0.883 0.794 n n n ruditapes_c10452 1.199 0.949 0.209 0.25 n n n ruditapes_c17536 1.349 0.949 0.076 0.103 n n n ruditapes_c14624 1.349 0.949 0.076 0.102 n n n ruditapes_c12000 1.349 0.949 0.075 0.101 n n n ruditapes_c5114 1.349 0.949 0.075 0.101 n n n ruditapes_s39047 1.349 0.949 0.075 0.101 n n n ruditapes_c3543 1.349 0.949 0.074 0.1 n n n ruditapes_c2639 -1.041 0.95 7.285 6.998 n n n ruditapes_c27546 -1.045 0.95 5.795 5.543 n n n ruditapes_c17209 1.035 0.95 4.578 4.739 n n n ruditapes2_c1082 1.046 0.95 hypothetical protein BRAFLDRAFT_91066 [Branchiostoma floridae] 2.809 2.939 n n n ruditapes_c24260 1.054 0.95 2.185 2.304 n n n ruditapes_c20927 -1.067 0.95 2.342 2.194 n n n ruditapes2_c2284 1.06 0.95 elegans protein confirmed by transcript evidence 1.784 1.891 n n n ruditapes2_c3593 -1.074 0.95 1.956 1.821 n n n ruditapes_c28168 -1.08 0.95 1.663 1.54 n n n ruditapes_c29908 -1.092 0.95 isoform a /// 0045955 // negative regulation of calcium ion-dependent exocytosis /// 0000149 // SNARE binding /// 0016079 // synaptic vesicle exocytosis /// 0005509 // calcium ion binding /// 0030285 // integral to synaptic vesicle membrane 1.236 1.132 n n n ruditapes_c30099 1.085 0.95 mCG1027110 [Mus musculus] 0.991 1.075 n n n ruditapes2_c6421 -1.112 0.95 0.852 0.766 n n n ruditapes_c31822 -1.112 0.95 0.852 0.766 n n n ruditapes_c24935 -1.112 0.95 0.849 0.763 n n n ruditapes_c9137 -1.112 0.95 0.848 0.762 n n n ruditapes_c7449 -1.112 0.95 0.846 0.761 n n n ruditapes2_c2459 -1.112 0.95 0.834 0.75 n n n ruditapes_c12361 -1.112 0.95 0.832 0.748 n n n ruditapes_c8733 -1.112 0.95 0.828 0.744 n n n ruditapes_c24434 1.124 0.95 0.482 0.542 n n n ruditapes_c23430 1.124 0.95 0.475 0.534 n n n ruditapes_c25695 1.124 0.95 0.475 0.534 n n n ruditapes2_lrc4406 1.199 0.95 transport protein sec61 subunit gamma /// 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity /// 0006886 // intracellular protein transport /// 0030176 // integral to endoplasmic reticulum membrane 0.199 0.239 n n n ruditapes_c14068 1.349 0.95 0.074 0.099 n n n ruditapes_c17430 1.349 0.95 0.073 0.099 n n n ruditapes_c21605 1.349 0.95 0.073 0.099 n n n ruditapes_c17341 1.349 0.95 egf-like protein 0.073 0.098 n n n ruditapes_lrc30156 -1.025 0.951 ribosomal protein l7a /// 0042788 // polysomal ribosome /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0005624 // membrane fraction /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 24.639 24.048 n n n ruditapes2_c1131 1.012 0.951 tropomyosin 22.151 22.412 n n n ruditapes_c2454 -1.028 0.951 18.477 17.98 n n n ruditapes_c7253 -1.036 0.951 9.281 8.956 n n n ruditapes_c25370 -1.048 0.951 4.754 4.535 n n n ruditapes_c8266 -1.049 0.951 4.537 4.324 n n n ruditapes2_c2301 1.038 0.951 myeloid lymphoid or mixed lineage-leukemia translocation to 3 homolog /// 0034961 // cellular biopolymer biosynthetic process /// 0010467 // gene expression /// 0016070 // RNA metabolic process /// 0044424 // intracellular part 3.765 3.909 n n n ruditapes_c14513 1.041 0.951 3.451 3.591 n n n ruditapes_c16934 -1.056 0.951 3.307 3.131 n n n ruditapes2_c1894 1.045 0.951 2.835 2.962 n n n ruditapes_c8473 1.049 0.951 2.453 2.574 n n n ruditapes_c11733 1.053 0.951 2.14 2.254 n n n ruditapes_c18313 1.056 0.951 1.987 2.097 n n n ruditapes_c30997 -1.086 0.951 1.393 1.283 n n n ruditapes_c8185 1.087 0.951 asialoglycoprotein receptor 2 /// 0065007 // biological regulation /// 0005488 // binding /// 0009987 // cellular process 0.882 0.958 n n n ruditapes_c14023 -1.112 0.951 0.812 0.73 n n n ruditapes_c29237 -1.112 0.951 0.808 0.727 n n n ruditapes_c31749 -1.112 0.951 0.806 0.725 n n n ruditapes_c25091 -1.112 0.951 0.804 0.723 n n n ruditapes_c27910 1.124 0.951 0.471 0.529 n n n ruditapes_c14005 1.124 0.951 von hippel-lindau tumor suppressor 0.467 0.525 n n n ruditapes_c29277 1.124 0.951 0.462 0.519 n n n ruditapes_c18952 1.124 0.951 0.457 0.514 n n n ruditapes_c20443 1.199 0.951 0.198 0.237 n n n ruditapes_c14820 1.349 0.951 unnamed protein product [Homo sapiens] 0.07 0.095 n n n ruditapes_lrc16619 1.349 0.951 0.069 0.093 n n n ruditapes2_c573 -1.483 0.951 vitelline membrane outer layer 1 homolog 0.062 0.042 n n n ruditapes_lrc38329 1.003 0.952 76.876 77.095 n n n ruditapes_c26236 1.019 0.952 10.858 11.064 n n n ruditapes_c24404 1.031 0.952 5.275 5.436 n n n ruditapes_c10354 -1.047 0.952 4.76 4.546 n n n ruditapes2_c696 -1.048 0.952 transketolase /// 0046872 // metal ion binding /// 0016740 // transferase activity 4.727 4.512 n n n ruditapes_c26654 1.039 0.952 3.501 3.638 n n n ruditapes_c25884 1.043 0.952 2.996 3.126 n n n ruditapes_lrc26019 1.046 0.952 2.661 2.783 n n n ruditapes_lrc16923 1.049 0.952 2.392 2.51 n n n ruditapes_c3634 1.049 0.952 2.348 2.464 n n n ruditapes_c15784 1.055 0.952 1.963 2.071 n n n ruditapes_c15432 1.056 0.952 mitochondrial manganese superoxide dismutase 1.865 1.969 n n n ruditapes_c9944 -1.071 0.952 1.982 1.851 n n n ruditapes2_c2062 -1.074 0.952 1.832 1.707 n n n ruditapes_c15801 1.065 0.952 endonuclease-reverse transcriptase 1.463 1.558 n n n ruditapes_c25870 -1.082 0.952 synaptotagmin v /// 0048471 // perinuclear region of cytoplasm /// 0005794 // Golgi apparatus /// 0043051 // regulation of pharyngeal pumping /// 0030421 // defecation /// 0045955 // negative regulation of calcium ion-dependent exocytosis /// 0000149 // SNARE binding /// 0016079 // synaptic vesicle exocytosis /// 0043025 // cell soma /// 0007626 // locomotory behavior /// 0046928 // regulation of neurotransmitter secretion /// 0005509 // calcium ion binding /// 0030285 // integral to synaptic vesicle membrane 1.488 1.375 n n n ruditapes2_lrc6034 -1.082 0.952 ubiquinol-cytochrome c complex iii subunit /// 0005739 // mitochondrion /// 0016020 // membrane 1.441 1.332 n n n ruditapes_c4135 -1.085 0.952 1.37 1.263 n n n ruditapes_c24377 -1.085 0.952 1.362 1.256 n n n ruditapes2_c567 1.079 0.952 glutathione s-transferase theta 1 /// 0014070 // response to organic cyclic substance /// 0042493 // response to drug /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005829 // cytosol /// 0004602 // glutathione peroxidase activity 1.016 1.097 n n n ruditapes_c28895 -1.112 0.952 0.789 0.71 n n n ruditapes_c25787 -1.112 0.952 0.786 0.707 n n n ruditapes2_c314 -1.112 0.952 0.768 0.691 n n n ruditapes2_c3096 1.109 0.952 0.565 0.627 n n n ruditapes2_c1296 1.111 0.952 0.538 0.598 n n n ruditapes_c15852 1.199 0.952 0.188 0.225 n n n ruditapes_c4307 1.349 0.952 0.066 0.089 n n n ruditapes_c10850 -1.021 0.953 34.964 34.234 n n n ruditapes_c8356 -1.03 0.953 14.252 13.843 n n n ruditapes_c10223 1.031 0.953 family with sequence similarity member a /// 0005634 // nucleus 4.859 5.009 n n n ruditapes_lrc35487 -1.046 0.953 4.879 4.666 n n n ruditapes_c5955 -1.05 0.953 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 4.083 3.888 n n n ruditapes_lrc17169 1.045 0.953 2.656 2.775 n n n ruditapes2_c864 1.057 0.953 translocase of outer mitochondrial membrane 22 homolog /// 0000299 // integral to membrane of membrane fraction /// 0006886 // intracellular protein transport /// 0005742 // mitochondrial outer membrane translocase complex /// 0008320 // protein transmembrane transporter activity /// 0005743 // mitochondrial inner membrane /// 0070096 // mitochondrial outer membrane translocase complex assembly 1.765 1.865 n n n ruditapes_c24964 -1.074 0.953 1.778 1.656 n n n ruditapes_c23742 -1.075 0.953 1.667 1.551 n n n ruditapes2_c1476 1.065 0.953 1.359 1.448 n n n ruditapes_c18802 1.068 0.953 1.278 1.365 n n n ruditapes_c29789 1.096 0.953 0.673 0.737 n n n ruditapes2_c2241 -1.112 0.953 0.745 0.67 n n n ruditapes2_c650 -1.112 0.953 0.74 0.665 n n n ruditapes_c23951 1.199 0.953 protein 0.18 0.216 n n n ruditapes_c18876 1.199 0.953 0.176 0.212 n n n ruditapes_c2547 1.199 0.953 proline-rich transmembrane protein 1 0.176 0.211 n n n ruditapes2_c2216 1.349 0.953 solute carrier family 6 (neurotransmitter creatine) member 8 /// 0006810 // transport /// 0016020 // membrane /// 0005328 // neurotransmitter:sodium symporter activity 0.065 0.088 n n n ruditapes_c5547 1.349 0.953 ribosomal protein l3 /// 0000022 // mitotic spindle elongation /// 0022626 // cytosolic ribosome 0.065 0.088 n n n ruditapes_c17164 1.349 0.953 0.064 0.086 n n n ruditapes_c24954 1.349 0.953 0.064 0.086 n n n ruditapes_lrc36863 1.349 0.953 transport protein sec61 subunit gamma /// 0005789 // endoplasmic reticulum membrane /// 0006886 // intracellular protein transport /// 0016021 // integral to membrane /// 0008565 // protein transporter activity 0.063 0.085 n n n ruditapes_c29391 -1.034 0.954 9.354 9.044 n n n ruditapes_c11017 1.026 0.954 iq motif containing with aaa domain 6.264 6.424 n n n ruditapes_lrc35751 1.041 0.954 atp h+ mitochondrial f0 subunit isoform 1 /// 0015992 // proton transport /// 0046034 // ATP metabolic process /// 0005743 // mitochondrial inner membrane /// 0016787 // hydrolase activity 2.99 3.111 n n n ruditapes_c14293 -1.062 0.954 2.45 2.306 n n n ruditapes_c24177 -1.08 0.954 1.375 1.273 n n n ruditapes2_c1482 -1.088 0.954 down-regulator of transcription 1 /// 0003714 // transcription corepressor activity /// 0043565 // sequence-specific DNA binding /// 0005634 // nucleus /// 0000122 // negative regulation of transcription from RNA polymerase II promoter /// 0003887 // DNA-directed DNA polymerase activity 1.144 1.051 n n n ruditapes2_lrc2359 1.079 0.954 0.949 1.024 n n n ruditapes2_lrc5465 1.079 0.954 40s ribosomal protein s20 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.938 1.012 n n n ruditapes_c16497 1.079 0.954 tho complex 7 homolog 0.92 0.993 n n n ruditapes_c23503 -1.112 0.954 0.724 0.651 n n n ruditapes_c25549 -1.112 0.954 eukaryotic translation initiation factor 3 subunit (eif-3) 0.715 0.643 n n n ruditapes_c3801 1.109 0.954 0.509 0.564 n n n ruditapes_c26549 1.169 0.954 0.232 0.271 n n n ruditapes2_c836 -1.271 0.954 heat shock protein 0.14 0.11 n n n ruditapes_c27008 1.349 0.954 0.06 0.081 n n n ruditapes_c5986 1.015 0.955 13.305 13.506 n n n ruditapes_c4668 -1.029 0.955 13.355 12.979 n n n ruditapes2_c771 1.018 0.955 10.716 10.905 n n n ruditapes_c23123 -1.034 0.955 9.239 8.937 n n n ruditapes_c10938 1.037 0.955 3.303 3.425 n n n ruditapes2_c551 -1.06 0.955 2.465 2.325 n n n ruditapes_c28061 1.063 0.955 1.322 1.406 n n n ruditapes_c25423 1.068 0.955 1.173 1.253 n n n ruditapes2_c6046 1.099 0.955 proteasome maturation protein 0.58 0.638 n n n ruditapes_c17514 -1.112 0.955 0.685 0.616 n n n ruditapes_lrc35709 -1.112 0.955 caveolin 3 /// 0006810 // transport /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0060035 // notochord cell development /// 0005515 // protein binding /// 0043234 // protein complex /// 0006469 // negative regulation of protein kinase activity /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0045214 // sarcomere organization /// 0008016 // regulation of heart contraction /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0048523 // negative regulation of cellular process /// 0045121 // membrane raft /// 0042391 // regulation of membrane potential 0.674 0.606 n n n ruditapes_c25503 1.104 0.955 0.548 0.605 n n n ruditapes2_c1180 -1.112 0.955 0.67 0.603 n n n ruditapes_lrc32289 1.107 0.955 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0005739 // mitochondrion 0.517 0.572 n n n ruditapes_c18721 1.124 0.955 0.396 0.446 n n n ruditapes_c14272 1.124 0.955 0.395 0.444 n n n ruditapes_c3504 1.156 0.955 0.26 0.301 n n n ruditapes_c1947 -1.213 0.955 0.201 0.166 n n n ruditapes2_c411 1.349 0.955 protein 0.06 0.08 n n n ruditapes_c2950 1.349 0.955 0.059 0.08 n n n ruditapes2_c785 1.349 0.955 0.059 0.079 n n n ruditapes_c29972 1.018 0.956 9.56 9.735 n n n ruditapes_c17300 -1.039 0.956 6.354 6.118 n n n ruditapes_lrc34338 -1.053 0.956 ribosomal protein l35a /// 0006414 // translational elongation /// 0005515 // protein binding /// 0005840 // ribosome /// 0006364 // rRNA processing /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome /// 0000049 // tRNA binding /// 0042273 // ribosomal large subunit biogenesis 3.034 2.881 n n n ruditapes_c27001 1.046 0.956 PREDICTED: hypothetical protein [Rattus norvegicus] 2.147 2.246 n n n ruditapes_c15278 -1.065 0.956 1.982 1.861 n n n ruditapes_c11061 1.054 0.956 1.68 1.771 n n n ruditapes_c12552 -1.071 0.956 1.64 1.532 n n n ruditapes_c30900 1.06 0.956 1.406 1.49 n n n ruditapes_c28307 -1.085 0.956 aminoacylase 1-like 2 1.125 1.037 n n n ruditapes_lrc37177 -1.112 0.956 flagellar outer dynein arm light chain 8 /// 0048856 // anatomical structure development /// 0007275 // multicellular organismal development /// 0044444 // cytoplasmic part /// 0005875 // microtubule associated complex /// 0000003 // reproduction /// 0003777 // microtubule motor activity /// 0007017 // microtubule-based process 0.661 0.595 n n n ruditapes_c13382 -1.112 0.956 0.654 0.588 n n n ruditapes_c17903 -1.213 0.956 0.198 0.163 n n n ruditapes_c37266 1.349 0.956 0.057 0.077 n n n ruditapes_c4558 1.349 0.956 0.057 0.077 n n n ruditapes_c14118 1.349 0.956 solute carrier family 28 (sodium-coupled nucleoside transporter) member 3 /// 0006810 // transport /// 0005415 // nucleoside:sodium symporter activity 0.057 0.076 n n n ruditapes2_c2943 -1.041 0.957 5.33 5.119 n n n ruditapes_c13823 -1.046 0.957 heat shock protein 9 /// 0005524 // ATP binding /// 0040007 // growth /// 0002119 // nematode larval development /// 0016887 // ATPase activity /// 0006916 // anti-apoptosis /// 0000003 // reproduction /// 0016491 // oxidoreductase activity /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0030097 // hemopoiesis /// 0051082 // unfolded protein binding /// 0006457 // protein folding /// 0009792 // embryonic development ending in birth or egg hatching 3.984 3.808 n n n ruditapes_c8926 -1.048 0.957 protein 3.711 3.542 n n n ruditapes_c22413 -1.055 0.957 2.746 2.602 n n n ruditapes_c15518 1.049 0.957 1.882 1.975 n n n ruditapes_c15808 -1.065 0.957 sco-spondin 1.949 1.83 n n n ruditapes_c17865 1.079 0.957 0.828 0.894 n n n ruditapes_s32816 1.079 0.957 ribosomal protein s20 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.809 0.873 n n n ruditapes2_c844 1.092 0.957 transcription elongation factor spt4 /// 0006350 // transcription /// 0005488 // binding 0.624 0.682 n n n ruditapes_c7388 1.099 0.957 0.53 0.583 n n n ruditapes_c27808 -1.112 0.957 cathepsin c /// 0006508 // proteolysis /// 0005764 // lysosome /// 0006955 // immune response /// 0004197 // cysteine-type endopeptidase activity 0.634 0.571 n n n ruditapes_c27826 -1.112 0.957 conserved hypothetical protein [Pediculus humanus corporis] 0.628 0.564 n n n ruditapes_s35457 -1.112 0.957 developmentally-regulated vdg3 0.619 0.556 n n n ruditapes_c22525 -1.112 0.957 0.612 0.55 n n n ruditapes2_c2426 -1.112 0.957 complement component q subcomponent-like 4 /// 0005576 // extracellular region 0.611 0.55 n n n ruditapes_lrc34710 1.124 0.957 protein /// 0016853 // isomerase activity 0.361 0.406 n n n ruditapes_lrc32451 1.199 0.957 myosin heavy skeletal muscle or cardiac /// 0005524 // ATP binding /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0051015 // actin filament binding /// 0005863 // striated muscle thick filament 0.148 0.178 n n n ruditapes_c10605 1.349 0.957 0.054 0.073 n n n ruditapes_c3160 1.349 0.957 mitochondrial ribosomal 0.054 0.073 n n n ruditapes_lrc36305 1.349 0.957 stanniocalcin-like protein 0.053 0.072 n n n ruditapes_c6721 -1.023 0.958 21.495 21.006 n n n ruditapes_c28484 -1.024 0.958 hla-b associated transcript 1 "/// 0005524 // ATP binding /// 0015175 // neutral amino acid transmembrane transporter activity /// 0005681 // spliceosomal complex /// 0006520 // cellular amino acid metabolic process /// 0015804 // neutral amino acid transport /// 0006406 // mRNA export from nucleus /// 0042802 // identical protein binding /// 0004004 // ATP-dependent RNA helicase activity /// 0006461 // protein complex assembly /// 0003723 // RNA binding /// 0042605 // peptide antigen binding /// 0005887 // integral to plasma membrane /// 0015184 // L-cystine transmembrane transporter activity /// 0000398 // nuclear mRNA splicing, via spliceosome" 19.175 18.723 n n n ruditapes_c9536 -1.025 0.958 17.075 16.657 n n n ruditapes_c8790 1.016 0.958 10.653 10.823 n n n ruditapes_c10832 1.025 0.958 5.611 5.749 n n n ruditapes2_lrc3074 1.032 0.958 3.805 3.926 n n n ruditapes_c12100 -1.049 0.958 thyroid hormone receptor interactor 11 /// 0006366 // transcription from RNA polymerase II promoter /// 0003713 // transcription coactivator activity /// 0005634 // nucleus 3.234 3.082 n n n ruditapes_c24267 -1.052 0.958 2.889 2.746 n n n ruditapes_c15566 -1.06 0.958 ubiquitin fusion degradation protein 1 homolog 2.136 2.015 n n n ruditapes_c20846 1.049 0.958 malate dehydrogenase nad /// 0003824 // catalytic activity /// 0008152 // metabolic process 1.762 1.849 n n n ruditapes_c18397 -1.066 0.958 1.8 1.689 n n n ruditapes_c15673 1.054 0.958 1.483 1.564 n n n ruditapes_c9216 1.065 0.958 ureidoglycolate hydrolase /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0003824 // catalytic activity 1.106 1.178 n n n ruditapes_c9312 -1.083 0.958 1.096 1.011 n n n ruditapes_c17092 1.079 0.958 0.764 0.824 n n n ruditapes_c8008 1.087 0.958 0.672 0.73 n n n ruditapes2_c5199 -1.112 0.958 mannose receptor c1 0.605 0.544 n n n ruditapes_c8395 -1.112 0.958 gm2 activator protein 0.603 0.542 n n n ruditapes_lrc35437 -1.112 0.958 hydrogen-transporting atp g- /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0006811 // ion transport /// 0005515 // protein binding 0.592 0.532 n n n ruditapes_c27636 -1.112 0.958 0.584 0.525 n n n ruditapes_c23312 -1.112 0.958 cleft lip and palate associated transmembrane protein 1 /// 0044425 // membrane part /// 0032502 // developmental process 0.583 0.524 n n n ruditapes_c3956 -1.112 0.958 0.582 0.524 n n n ruditapes_c6106 -1.112 0.958 0.58 0.521 n n n ruditapes_lrc33053 1.124 0.958 0.339 0.382 n n n ruditapes_c19640 1.199 0.958 0.142 0.17 n n n ruditapes_c23439 1.349 0.958 0.052 0.07 n n n ruditapes_c3040 1.349 0.958 0.052 0.07 n n n ruditapes_c3064 -1.027 0.959 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0055114 // oxidation reduction /// 0006108 // malate metabolic process /// 0006099 // tricarboxylic acid cycle /// 0005488 // binding /// 0006096 // glycolysis /// 0005829 // cytosol 13.491 13.133 n n n ruditapes_c1186 1.021 0.959 6.831 6.975 n n n ruditapes2_c3642 1.022 0.959 myosin heavy chain /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0003774 // motor activity /// 0006941 // striated muscle contraction /// 0051015 // actin filament binding /// 0005863 // striated muscle thick filament 6.521 6.665 n n n ruditapes2_c2457 1.027 0.959 4.621 4.744 n n n ruditapes_c29440 1.028 0.959 4.365 4.487 n n n ruditapes_c25080 -1.049 0.959 3.183 3.033 n n n ruditapes_c6637 1.037 0.959 selenium binding protein 1 /// 0006810 // transport /// 0008430 // selenium binding /// 0044424 // intracellular part 2.746 2.848 n n n ruditapes_c29129 -1.052 0.959 2.73 2.594 n n n ruditapes_c28066 -1.053 0.959 2.635 2.501 n n n ruditapes_c29679 1.044 0.959 2.085 2.177 n n n ruditapes_c5217 -1.06 0.959 2.011 1.897 n n n ruditapes_c29649 1.049 0.959 1.68 1.762 n n n ruditapes_c30217 -1.064 0.959 1.77 1.664 n n n ruditapes_c15166 1.058 0.959 complement component q subcomponent-like 4 1.312 1.388 n n n ruditapes2_c1770 -1.072 0.959 leukocyte receptor cluster member 9 1.384 1.291 n n n ruditapes_c7439 -1.075 0.959 1.278 1.189 n n n ruditapes_c14983 1.072 0.959 0.851 0.912 n n n ruditapes2_c2841 1.092 0.959 0.551 0.602 n n n ruditapes_c27706 1.092 0.959 0.551 0.602 n n n ruditapes_lrc32727 -1.112 0.959 0.571 0.514 n n n ruditapes_c19302 -1.112 0.959 0.564 0.507 n n n ruditapes2_c685 -1.112 0.959 0.563 0.506 n n n ruditapes_c5434 1.124 0.959 0.331 0.372 n n n ruditapes_c20834 1.124 0.959 0.325 0.365 n n n ruditapes_c13527 1.124 0.959 0.324 0.365 n n n ruditapes_lrc12476 1.124 0.959 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.323 0.363 n n n ruditapes_c8066 1.124 0.959 0.321 0.361 n n n ruditapes_c11649 1.349 0.959 0.05 0.067 n n n ruditapes_lrc16059 1.349 0.959 0.049 0.066 n n n ruditapes_c6757 1.018 0.96 8.181 8.329 n n n ruditapes_c22000 -1.033 0.96 7.336 7.099 n n n ruditapes_c9960 -1.044 0.96 4.019 3.85 n n n ruditapes_c857 -1.045 0.96 chaperonin containing subunit 2 /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0005730 // nucleolus /// 0051082 // unfolded protein binding /// 0006457 // protein folding 3.599 3.443 n n n ruditapes_c13547 1.032 0.96 3.309 3.415 n n n ruditapes_c2364 -1.046 0.96 3.376 3.226 n n n ruditapes_c13628 1.04 0.96 2.356 2.449 n n n ruditapes2_c794 -1.055 0.96 translocase of outer mitochondrial membrane 7 homolog 2.365 2.242 n n n ruditapes_lrc37243 -1.066 0.96 ribosomal protein s6 1.652 1.55 n n n ruditapes_c22574 1.06 0.96 1.16 1.229 n n n ruditapes_c12183 1.06 0.96 lsm2 u6 small nuclear rna associated ( cerevisiae) "/// 0019901 // protein kinase binding /// 0005688 // U6 snRNP /// 0017070 // U6 snRNA binding /// 0000244 // assembly of spliceosomal tri-snRNP /// 0006402 // mRNA catabolic process /// 0005737 // cytoplasm /// 0046540 // U4/U6 x U5 tri-snRNP complex /// 0000381 // regulation of alternative nuclear mRNA splicing, via spliceosome" 1.135 1.203 n n n ruditapes_c27583 -1.074 0.96 1.284 1.196 n n n ruditapes_c4247 1.063 0.96 caveolin 3 /// 0006810 // transport /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0060035 // notochord cell development /// 0005515 // protein binding /// 0043234 // protein complex /// 0006469 // negative regulation of protein kinase activity /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0045214 // sarcomere organization /// 0008016 // regulation of heart contraction /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0048523 // negative regulation of cellular process /// 0045121 // membrane raft /// 0042391 // regulation of membrane potential 1.053 1.12 n n n ruditapes_c10959 1.064 0.96 1.006 1.07 n n n ruditapes_c28757 1.079 0.96 programmed cell death 2-like 0.712 0.768 n n n ruditapes_c17443 -1.112 0.96 0.548 0.493 n n n ruditapes_c24524 -1.112 0.96 0.547 0.492 n n n ruditapes_c11701 -1.112 0.96 0.546 0.491 n n n ruditapes_c10653 1.124 0.96 0.317 0.356 n n n ruditapes_c9416 1.124 0.96 0.315 0.354 n n n ruditapes_c13632 1.124 0.96 0.309 0.348 n n n ruditapes2_c1320 1.199 0.96 0.13 0.156 n n n ruditapes2_c2189 1.349 0.96 cysteine rich bmp regulator 2 (chordin like) 0.045 0.061 n n n ruditapes_s36753 -1.004 0.961 nadh dehydrogenase subunit 4l 797.676 794.228 n n n ruditapes_c27890 1.015 0.961 9.721 9.869 n n n ruditapes_c23625 -1.036 0.961 5.94 5.731 n n n ruditapes_c14348 -1.046 0.961 3.299 3.152 n n n ruditapes_lrc24658 1.036 0.961 2.687 2.783 n n n ruditapes_c13577 -1.057 0.961 2.083 1.97 n n n ruditapes_c11275 -1.068 0.961 1.387 1.298 n n n ruditapes_c6983 1.06 0.961 1.126 1.193 n n n ruditapes_c23411 -1.076 0.961 1.144 1.063 n n n ruditapes_c3006 1.068 0.961 0.9 0.961 n n n ruditapes_c14625 1.068 0.961 0.892 0.953 n n n ruditapes_c9109 -1.112 0.961 0.524 0.472 n n n ruditapes_c11936 -1.112 0.961 0.524 0.471 n n n ruditapes_s34275 -1.112 0.961 0.522 0.47 n n n ruditapes2_lrc5753 -1.112 0.961 0.521 0.469 n n n ruditapes2_lrc6294 -1.112 0.961 calcium-binding ef-hand domain protein 0.52 0.468 n n n ruditapes_c26827 -1.112 0.961 0.511 0.46 n n n ruditapes_c12882 -1.112 0.961 0.501 0.451 n n n ruditapes_c23250 -1.112 0.961 glutamate synthetase /// 0003824 // catalytic activity /// 0008152 // metabolic process 0.5 0.45 n n n ruditapes_c13221 1.124 0.961 adaptor-related protein complex ap- sigma 1 /// 0006810 // transport /// 0044464 // cell part 0.301 0.338 n n n ruditapes_c23550 1.124 0.961 0.296 0.332 n n n ruditapes_c17442 1.124 0.961 0.295 0.332 n n n ruditapes2_c6634 1.349 0.961 angiopoietin-like 2 0.045 0.061 n n n ruditapes2_c810 -1.021 0.962 gelsolin 23.462 22.977 n n n ruditapes2_c5696 1.014 0.962 11.092 11.244 n n n ruditapes_c9261 -1.038 0.962 wd repeat domain 18 5.004 4.822 n n n ruditapes_c17470 1.026 0.962 4.261 4.373 n n n ruditapes_c15282 -1.044 0.962 3.552 3.402 n n n ruditapes_c26791 -1.046 0.962 3.188 3.046 n n n ruditapes_c16579 -1.053 0.962 2.298 2.182 n n n ruditapes_c10307 1.042 0.962 1.871 1.95 n n n ruditapes_c15508 -1.059 0.962 1.806 1.706 n n n ruditapes2_c2433 1.049 0.962 1.507 1.581 n n n ruditapes_c26011 1.049 0.962 1.445 1.517 n n n ruditapes_c24217 -1.064 0.962 1.54 1.448 n n n ruditapes_c8613 1.058 0.962 ubiquitin specific peptidase 14 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0007268 // synaptic transmission /// 0004221 // ubiquitin thiolesterase activity /// 0019717 // synaptosome /// 0008234 // cysteine-type peptidase activity /// 0005625 // soluble fraction /// 0005737 // cytoplasm /// 0006464 // protein modification process 1.111 1.175 n n n ruditapes_lrc23337 1.06 0.962 1.055 1.118 n n n ruditapes_c11779 -1.112 0.962 0.498 0.448 n n n ruditapes_c14987 -1.112 0.962 0.494 0.444 n n n ruditapes2_lrc4037 -1.112 0.962 predicted protein [Nematostella vectensis] 0.493 0.443 n n n ruditapes_c11363 -1.112 0.962 0.481 0.432 n n n ruditapes_c28323 -1.112 0.962 0.479 0.431 n n n ruditapes_c16480 1.124 0.962 0.279 0.314 n n n ruditapes_c841 1.349 0.962 0.042 0.057 n n n ruditapes2_c96 -1.023 0.963 17.514 17.121 n n n ruditapes_c15287 1.012 0.963 12.716 12.866 n n n ruditapes_c20640 1.012 0.963 11.63 11.774 n n n ruditapes2_c324 -1.029 0.963 dynein light chain roadblock-type 2 /// 0005868 // cytoplasmic dynein complex /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0005874 // microtubule /// 0003777 // microtubule motor activity /// 0007018 // microtubule-based movement 9.727 9.456 n n n ruditapes2_c2797 1.022 0.963 5.165 5.281 n n n ruditapes_c28488 -1.046 0.963 3.159 3.021 n n n ruditapes_c10162 -1.051 0.963 2.397 2.28 n n n ruditapes_c9596 1.042 0.963 1.852 1.93 n n n ruditapes_c14905 1.043 0.963 proteasome ( macropain) 26s non- 2 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0030234 // enzyme regulator activity /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0042176 // regulation of protein catabolic process /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle 1.772 1.849 n n n ruditapes_c5167 1.049 0.963 1.372 1.44 n n n ruditapes_c30888 -1.066 0.963 1.385 1.3 n n n ruditapes2_lrc4820 -1.071 0.963 developmentally-regulated vdg3 1.187 1.109 n n n ruditapes_c9659 -1.074 0.963 1.085 1.01 n n n ruditapes_c21971 1.063 0.963 0.903 0.96 n n n ruditapes_c8004 1.072 0.963 0.717 0.769 n n n ruditapes_s36200 -1.112 0.963 0.468 0.421 n n n ruditapes2_c7467 -1.112 0.963 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0.462 0.416 n n n ruditapes_c10322 -1.112 0.963 0.452 0.407 n n n ruditapes_c26191 -1.112 0.963 0.451 0.406 n n n ruditapes2_c1154 1.199 0.963 0.108 0.13 n n n ruditapes_lrc33573 1.349 0.963 elastase 2 like 0.041 0.055 n n n ruditapes_c1168 1.004 0.964 37.014 37.153 n n n ruditapes_c1776 -1.023 0.964 15.399 15.048 n n n ruditapes_c822 1.014 0.964 9.588 9.721 n n n ruditapes_c23043 1.031 0.964 2.823 2.91 n n n ruditapes_c15932 1.06 0.964 fibrocystin l 0.96 1.018 n n n ruditapes_c23347 1.063 0.964 0.843 0.896 n n n ruditapes_c39373 -1.112 0.964 translocon-associated protein subunit gamma /// 0005811 // lipid particle /// 0005789 // endoplasmic reticulum membrane /// 0032991 // macromolecular complex 0.437 0.393 n n n ruditapes_c13464 -1.112 0.964 0.427 0.384 n n n ruditapes_c20322 -1.112 0.964 protein kinase 0.424 0.382 n n n ruditapes_lrc32688 1.124 0.964 0.256 0.288 n n n ruditapes2_c236 1.199 0.964 0.105 0.126 n n n ruditapes_lrc12553 -1.02 0.965 23.997 23.532 n n n ruditapes_c27851 1.012 0.965 10.634 10.766 n n n ruditapes_c1795 -1.031 0.965 7.214 7.001 n n n ruditapes_c9776 1.022 0.965 4.785 4.89 n n n ruditapes2_lrc6087 1.022 0.965 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 4.722 4.826 n n n ruditapes_c3938 -1.037 0.965 4.656 4.492 n n n ruditapes_c21739 -1.043 0.965 3.189 3.057 n n n ruditapes_c9048 1.03 0.965 2.938 3.025 n n n ruditapes_c7912 -1.044 0.965 surfeit 2 2.954 2.829 n n n ruditapes_c12341 1.031 0.965 vitelline membrane outer layer 1 homolog 2.735 2.819 n n n ruditapes_c4866 1.032 0.965 2.683 2.768 n n n ruditapes_c10244 1.033 0.965 2.519 2.602 n n n ruditapes_c15072 -1.05 0.965 solute carrier family 28 (sodium-coupled nucleoside transporter) member 3 /// 0015858 // nucleoside transport /// 0005415 // nucleoside:sodium symporter activity 2.221 2.115 n n n ruditapes_c29640 1.04 0.965 1.771 1.842 n n n ruditapes_c22851 -1.055 0.965 1.784 1.69 n n n ruditapes2_c695 -1.059 0.965 1.572 1.484 n n n ruditapes_lrc34842 -1.064 0.965 mitochondrial 28s ribosomal protein s33 /// 0005763 // mitochondrial small ribosomal subunit /// 0003735 // structural constituent of ribosome 1.325 1.245 n n n ruditapes_c5050 -1.071 0.965 1.079 1.008 n n n ruditapes_c18048 -1.071 0.965 succinate- adp- beta subunit /// 0004774 // succinate-CoA ligase activity /// 0005739 // mitochondrion /// 0005488 // binding /// 0008152 // metabolic process 1.072 1.001 n n n ruditapes_c16728 1.06 0.965 0.885 0.938 n n n ruditapes2_lrc5193 1.063 0.965 dynein light chain 2 "/// 0005868 // cytoplasmic dynein complex /// 0002119 // nematode larval development /// 0007290 // spermatid nucleus elongation /// 0035046 // pronuclear migration /// 0040010 // positive regulation of growth rate /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0040011 // locomotion /// 0005829 // cytosol /// 0002009 // morphogenesis of an epithelium /// 0010171 // body morphogenesis /// 0005874 // microtubule /// 0040035 // hermaphrodite genitalia development /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0009792 // embryonic development ending in birth or egg hatching /// 0007018 // microtubule-based movement" 0.816 0.867 n n n ruditapes_c7161 -1.078 0.965 0.856 0.794 n n n ruditapes_lrc24564 1.079 0.965 0.539 0.581 n n n ruditapes_c20664 1.079 0.965 angiopoietin-like 1 0.528 0.57 n n n ruditapes2_c1792 -1.112 0.965 0.423 0.38 n n n ruditapes_c31127 -1.112 0.965 0.416 0.374 n n n ruditapes_c7218 -1.112 0.965 0.411 0.37 n n n ruditapes_c22247 -1.112 0.965 0.41 0.369 n n n ruditapes_c24890 -1.112 0.965 0.408 0.367 n n n ruditapes_c31015 -1.112 0.965 0.408 0.367 n n n ruditapes_c13161 -1.112 0.965 0.406 0.365 n n n ruditapes_c7338 1.124 0.965 0.233 0.262 n n n ruditapes2_c384 1.006 0.966 23.4 23.53 n n n ruditapes2_c1189 -1.027 0.966 9.452 9.204 n n n ruditapes_c2515 -1.029 0.966 7.564 7.35 n n n ruditapes_c10463 1.019 0.966 serine protease inhibitor 2 5.314 5.417 n n n ruditapes_c22609 1.021 0.966 4.842 4.942 n n n ruditapes_c25203 1.063 0.966 0.79 0.84 n n n ruditapes2_c2633 1.063 0.966 0.774 0.823 n n n ruditapes_lrc37608 1.063 0.966 PREDICTED: similar to GA21374-PA [Strongylocentrotus purpuratus] 0.76 0.808 n n n ruditapes_c28301 1.092 0.966 brevican isoform 1 /// 0005488 // binding /// 0030672 // synaptic vesicle membrane /// 0048168 // regulation of neuronal synaptic plasticity 0.392 0.428 n n n ruditapes_lrc39092 -1.112 0.966 0.4 0.36 n n n ruditapes_c15266 -1.112 0.966 0.396 0.356 n n n ruditapes2_c2674 -1.112 0.966 0.392 0.352 n n n ruditapes_c19745 -1.112 0.966 0.39 0.351 n n n ruditapes_c16007 -1.112 0.966 p21-activated pak /// 0005524 // ATP binding /// 0005856 // cytoskeleton /// 0005925 // focal adhesion /// 0050803 // regulation of synapse structure and activity /// 0006468 // protein amino acid phosphorylation /// 0007391 // dorsal closure /// 0007254 // JNK cascade /// 0004702 // receptor signaling protein serine/threonine kinase activity /// 0050770 // regulation of axonogenesis /// 0007155 // cell adhesion /// 0007411 // axon guidance /// 0008360 // regulation of cell shape /// 0016601 // Rac protein signal transduction 0.384 0.346 n n n ruditapes_c22141 -1.112 0.966 0.378 0.34 n n n ruditapes_c27484 1.124 0.966 0.224 0.252 n n n ruditapes_c28843 1.124 0.966 GF19540 [Drosophila ananassae] 0.221 0.249 n n n ruditapes_c23975 -1.024 0.967 atp h+ mitochondrial f1 alpha subunit cardiac muscle /// 0005739 // mitochondrion /// 0005488 // binding /// 0016787 // hydrolase activity /// 0009987 // cellular process /// 0016469 // proton-transporting two-sector ATPase complex 12.345 12.056 n n n ruditapes_c4492 -1.027 0.967 8.983 8.75 n n n ruditapes_c15475 -1.028 0.967 7.704 7.493 n n n ruditapes_c37164 -1.036 0.967 heavy polypeptide 1 /// 0005488 // binding /// 0016787 // hydrolase activity 4.212 4.065 n n n ruditapes_c19225 -1.039 0.967 3.516 3.383 n n n ruditapes2_c1170 -1.04 0.967 3.238 3.113 n n n ruditapes_lrc31823 1.03 0.967 ppia protein /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 2.47 2.544 n n n ruditapes2_c68 1.04 0.967 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 1.573 1.636 n n n ruditapes_c26953 1.042 0.967 1.46 1.522 n n n ruditapes_c20853 -1.057 0.967 1.461 1.382 n n n ruditapes_c27605 1.049 0.967 1.139 1.195 n n n ruditapes2_lrc3560 -1.074 0.967 cytosolic malate dehydrogenase /// 0030060 // L-malate dehydrogenase activity /// 0005975 // carbohydrate metabolic process /// 0044237 // cellular metabolic process /// 0005829 // cytosol /// 0004470 // malic enzyme activity 0.883 0.823 n n n ruditapes_c19953 -1.074 0.967 0.879 0.819 n n n ruditapes_c26637 -1.076 0.967 0.828 0.769 n n n ruditapes_c9049 1.079 0.967 0.487 0.525 n n n ruditapes2_lrc4919 1.079 0.967 0.468 0.505 n n n ruditapes_c22897 1.092 0.967 0.367 0.401 n n n ruditapes_c13573 -1.112 0.967 0.373 0.336 n n n ruditapes_c19533 -1.112 0.967 solute carrier family 22 member 5 /// 0006811 // ion transport /// 0016020 // membrane /// 0022857 // transmembrane transporter activity 0.373 0.335 n n n ruditapes_c2681 1.124 0.967 0.205 0.231 n n n ruditapes_c5469 1.124 0.967 0.205 0.231 n n n ruditapes2_c4414 -1.017 0.968 glyceraldehyde-3-phosphate dehydrogenase /// 0055114 // oxidation reduction /// 0004365 // glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity /// 0006096 // glycolysis /// 0051287 // NAD or NADH binding /// 0005737 // cytoplasm 31.296 30.765 n n n ruditapes2_c1692 -1.023 0.968 cytochrome b-c1 complex subunit mitochondrial precursor 13.122 12.828 n n n ruditapes_c13812 1.01 0.968 11.478 11.593 n n n ruditapes_c1890 -1.025 0.968 9.777 9.536 n n n ruditapes_lrc21623 1.013 0.968 8.442 8.547 n n n ruditapes2_c71 1.03 0.968 smp-30 cgr1 family protein 2.437 2.509 n n n ruditapes_c23449 1.03 0.968 2.359 2.429 n n n ruditapes_lrc33899 1.041 0.968 ribosomal protein l10 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 1.437 1.497 n n n ruditapes_c18656 1.041 0.968 1.404 1.462 n n n ruditapes_c14577 1.041 0.968 1.385 1.443 n n n ruditapes_c12331 -1.059 0.968 1.272 1.201 n n n ruditapes_c22370 -1.064 0.968 1.075 1.011 n n n ruditapes_c20566 -1.067 0.968 0.961 0.9 n n n ruditapes_c21546 -1.112 0.968 0.351 0.315 n n n ruditapes2_c2510 -1.112 0.968 dopamine beta hydroxylase /// 0009308 // amine metabolic process /// 0005488 // binding /// 0006519 // cellular amino acid and derivative metabolic process /// 0004497 // monooxygenase activity /// 0009056 // catabolic process 0.336 0.303 n n n ruditapes_c38419 -1.112 0.968 0.336 0.302 n n n ruditapes_lrc33701 -1.112 0.968 predicted protein [Nematostella vectensis] 0.335 0.301 n n n ruditapes_s38464 1.124 0.968 ubiquitin-like protein fubi and ribosomal protein s30 precursor /// 0006414 // translational elongation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit 0.203 0.228 n n n ruditapes_lrc8788 1.124 0.968 0.199 0.223 n n n ruditapes_c10785 1.124 0.968 0.196 0.221 n n n ruditapes_c13735 1.124 0.968 0.192 0.216 n n n ruditapes_c30108 1.006 0.969 20.088 20.202 n n n ruditapes2_c3760 1.006 0.969 mitochondrial cytochrome c oxidase subunit 5b isoform 1 /// 0005811 // lipid particle /// 0005739 // mitochondrion 17.311 17.419 n n n ruditapes_c9303 -1.022 0.969 14.24 13.935 n n n ruditapes_c22650 1.01 0.969 10.72 10.83 n n n ruditapes_c16273 1.015 0.969 6.252 6.348 n n n ruditapes_c25630 -1.031 0.969 5.581 5.414 n n n ruditapes_c20659 -1.034 0.969 4.467 4.321 n n n ruditapes_c8825 -1.043 0.969 pentatricopeptide repeat domain 1 2.393 2.294 n n n ruditapes_lrc7530 -1.046 0.969 2.073 1.981 n n n ruditapes_c13288 1.036 0.969 1.652 1.711 n n n ruditapes_c23810 -1.059 0.969 1.241 1.172 n n n ruditapes_c963 -1.069 0.969 protein 0.84 0.786 n n n ruditapes_c30284 -1.074 0.969 0.739 0.688 n n n ruditapes_c10765 1.063 0.969 0.642 0.682 n n n ruditapes_c9051 1.063 0.969 protein jtb 0.621 0.66 n n n ruditapes_lrc16355 -1.076 0.969 0.694 0.645 n n n ruditapes_c19356 -1.112 0.969 0.331 0.298 n n n ruditapes_lrc26036 -1.112 0.969 glutathione s-transferase 0.327 0.294 n n n ruditapes_c10918 -1.112 0.969 0.321 0.289 n n n ruditapes_c7082 -1.112 0.969 0.32 0.288 n n n ruditapes_c30743 -1.112 0.969 0.318 0.286 n n n ruditapes_c21458 -1.112 0.969 0.314 0.283 n n n ruditapes_c9900 1.124 0.969 0.182 0.205 n n n ruditapes_s36553 1.124 0.969 0.18 0.202 n n n ruditapes2_c1900 1.199 0.969 "PREDICTED: similar to somatostatin receptor, putative [Hydra magnipapillata]" 0.075 0.091 n n n ruditapes_c2254 -1.019 0.97 mucin-like peritrophin 19.7 19.33 n n n ruditapes_c24522 -1.022 0.97 12.226 11.962 n n n ruditapes_c18992 -1.03 0.97 5.943 5.772 n n n ruditapes_c13619 -1.034 0.97 3.978 3.847 n n n ruditapes_c4712 -1.039 0.97 citrate synthase /// 0005759 // mitochondrial matrix /// 0044262 // cellular carbohydrate metabolic process /// 0004108 // citrate (Si)-synthase activity /// 0008415 // acyltransferase activity 2.974 2.863 n n n ruditapes_c13470 1.026 0.97 mgc82641 partial 2.656 2.725 n n n ruditapes_s39684 -1.04 0.97 ependymin related protein-1 precursor 2.667 2.564 n n n ruditapes2_c1101 1.036 0.97 urease accessory protein ureg /// 0005524 // ATP binding /// 0016151 // nickel ion binding 1.556 1.612 n n n ruditapes_c9831 -1.053 0.97 1.442 1.369 n n n ruditapes_c9875 -1.059 0.97 1.155 1.091 n n n ruditapes_c1270 1.049 0.97 selenium binding protein 1 /// 0015031 // protein transport /// 0005634 // nucleus /// 0016020 // membrane /// 0008430 // selenium binding /// 0005737 // cytoplasm 0.894 0.938 n n n ruditapes_c15337 -1.064 0.97 0.957 0.899 n n n ruditapes2_c3171 -1.078 0.97 si:ch211- protein 0.619 0.574 n n n ruditapes_c20481 1.068 0.97 0.508 0.542 n n n ruditapes_c31216 -1.112 0.97 0.312 0.28 n n n ruditapes_c28623 -1.112 0.97 hypothetical protein BRAFLDRAFT_76225 [Branchiostoma floridae] 0.309 0.278 n n n ruditapes_lrc27817 -1.112 0.97 0.306 0.275 n n n ruditapes_s36427 -1.112 0.97 0.305 0.274 n n n ruditapes_c4859 -1.112 0.97 0.304 0.274 n n n ruditapes2_c1282 -1.112 0.97 0.304 0.273 n n n ruditapes_c15218 -1.112 0.97 0.301 0.271 n n n ruditapes_c31268 -1.112 0.97 0.295 0.265 n n n ruditapes_c21632 1.124 0.97 0.178 0.2 n n n ruditapes_c12629 1.124 0.97 0.177 0.199 n n n ruditapes_c29754 1.124 0.97 0.17 0.191 n n n ruditapes_c12588 -1.017 0.971 27.698 27.246 n n n ruditapes_c17973 -1.019 0.971 19.362 19.01 n n n ruditapes2_c3122 1.01 0.971 cysteine- angiogenic 61 9.508 9.603 n n n ruditapes_lrc10579 -1.031 0.971 5.078 4.927 n n n ruditapes_c24456 1.019 0.971 4.139 4.216 n n n ruditapes_c12305 1.032 0.971 1.816 1.873 n n n ruditapes_c21317 1.034 0.971 1.618 1.674 n n n ruditapes_c14939 1.034 0.971 hypothetical protein AND4_12277 [Vibrio campbellii AND4] 1.567 1.621 n n n ruditapes_c25072 -1.05 0.971 1.475 1.405 n n n ruditapes_c18140 -1.053 0.971 1.32 1.253 n n n ruditapes2_c1652 -1.056 0.971 1.157 1.095 n n n ruditapes_c10503 -1.064 0.971 0.915 0.86 n n n ruditapes_c8440 -1.078 0.971 0.593 0.55 n n n ruditapes_lrc33185 1.079 0.971 0.36 0.388 n n n ruditapes_c28417 -1.112 0.971 0.286 0.258 n n n ruditapes_c16135 -1.112 0.971 retinol dehydrogenase 16 0.282 0.254 n n n ruditapes2_c2545 -1.112 0.971 endo-beta 1-4 mannanase "/// 0046355 // mannan catabolic process /// 0016985 // mannan endo-1, 4-beta-mannosidase activity" 0.273 0.246 n n n ruditapes_c22084 1.124 0.971 la ribonucleoprotein domain member 7 0.167 0.188 n n n ruditapes_lrc35964 1.124 0.971 cathepsin l 0.167 0.188 n n n ruditapes_c2006 1.124 0.971 serine proteinase /// 0004866 // endopeptidase inhibitor activity 0.167 0.187 n n n ruditapes_c22251 1.124 0.971 0.166 0.186 n n n ruditapes_s40453 1.124 0.971 0.166 0.186 n n n ruditapes_c30370 1.124 0.971 0.165 0.186 n n n ruditapes_s39730 1.124 0.971 ppia protein 0.165 0.185 n n n ruditapes_lrc33720 1.124 0.971 macrophage migration inhibitory factor 2 0.164 0.185 n n n ruditapes2_lrc4729 1.124 0.971 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity 0.162 0.182 n n n ruditapes_c9260 1.124 0.971 0.162 0.182 n n n ruditapes_c11278 1.124 0.971 0.161 0.181 n n n ruditapes_lrc36128 1.124 0.971 epididymal secretory protein e1 precursor /// 0043231 // intracellular membrane-bounded organelle /// 0065007 // biological regulation /// 0005488 // binding /// 0005737 // cytoplasm /// 0009987 // cellular process /// 0006869 // lipid transport 0.161 0.181 n n n ruditapes_lrc6844 1.124 0.971 0.161 0.181 n n n ruditapes_c20968 1.124 0.971 0.158 0.178 n n n ruditapes_c22327 1.124 0.971 0.158 0.178 n n n ruditapes_c12984 1.124 0.971 0.157 0.177 n n n ruditapes2_c852 1.349 0.971 type alpha 1 0.024 0.032 n n n ruditapes2_c304 -1.014 0.972 47.112 46.459 n n n ruditapes2_lrc4101 -1.025 0.972 glutathione s-transferase protein confirmed by transcript evidence 7.908 7.716 n n n ruditapes_c22009 -1.032 0.972 4.253 4.122 n n n ruditapes_c18716 -1.033 0.972 zinc finger protein 21 isoform 1 /// 0005488 // binding 3.778 3.656 n n n ruditapes_c11572 1.021 0.972 3.203 3.27 n n n ruditapes_c27505 -1.038 0.972 2.802 2.7 n n n ruditapes_c29153 1.034 0.972 1.475 1.526 n n n ruditapes_c20309 1.049 0.972 thap domain-containing protein 9 0.772 0.81 n n n ruditapes_lrc35345 -1.067 0.972 atp synthase beta subunit "/// 0043499 // eukaryotic cell surface binding /// 0006091 // generation of precursor metabolites and energy /// 0045261 // proton-transporting ATP synthase complex, catalytic core F(1) /// 0015992 // proton transport /// 0001525 // angiogenesis /// 0005886 // plasma membrane /// 0006629 // lipid metabolic process /// 0006933 // negative regulation of cell adhesion involved in substrate-bound cell migration /// 0046034 // ATP metabolic process /// 0005753 // mitochondrial proton-transporting ATP synthase complex /// 0046961 // proton-transporting ATPase activity, rotational mechanism /// 0042645 // mitochondrial nucleoid /// 0009986 // cell surface /// 0051453 // regulation of intracellular pH /// 0042288 // MHC class I protein binding" 0.759 0.711 n n n ruditapes_c30005 -1.067 0.972 0.747 0.7 n n n ruditapes_c28017 -1.067 0.972 angiopoietin-like 2 0.736 0.69 n n n ruditapes2_c1661 1.063 0.972 caprin family member 2 0.539 0.573 n n n ruditapes_lrc34632 1.063 0.972 ribosomal protein s3 /// 0005515 // protein binding /// 0003676 // nucleic acid binding /// 0005840 // ribosome /// 0006412 // translation /// 0032502 // developmental process /// 0050794 // regulation of cellular process 0.538 0.572 n n n ruditapes_c24289 1.063 0.972 0.528 0.561 n n n ruditapes_c1532 1.079 0.972 0.356 0.384 n n n ruditapes_lrc35416 -1.112 0.972 epdr1 protein 0.27 0.242 n n n ruditapes_c3348 -1.112 0.972 0.262 0.236 n n n ruditapes_c34150 -1.112 0.972 heavy polypeptide 1 /// 0040010 // positive regulation of growth rate /// 0042802 // identical protein binding /// 0016491 // oxidoreductase activity /// 0005506 // iron ion binding 0.26 0.233 n n n ruditapes_c29118 -1.112 0.972 0.256 0.23 n n n ruditapes_c12279 1.124 0.972 0.157 0.176 n n n ruditapes_lrc32913 1.124 0.972 riken cdna 1810013l24 gene 0.155 0.174 n n n ruditapes_lrc7146 1.124 0.972 0.15 0.168 n n n ruditapes_c11773 1.124 0.972 0.148 0.167 n n n ruditapes_c12959 1.124 0.972 0.148 0.166 n n n ruditapes_c24825 -1.017 0.973 21.89 21.519 n n n ruditapes_c10249 -1.026 0.973 6.831 6.661 n n n ruditapes_c11664 1.021 0.973 2.993 3.057 n n n ruditapes_c17415 -1.036 0.973 2.835 2.737 n n n ruditapes_c21697 -1.044 0.973 1.845 1.768 n n n ruditapes_c24995 1.031 0.973 ribonuclease large subunit /// 0016787 // hydrolase activity 1.714 1.766 n n n ruditapes2_c572 1.032 0.973 hypothetical protein BRAFLDRAFT_100109 [Branchiostoma floridae] 1.565 1.615 n n n ruditapes_c25918 -1.046 0.973 1.584 1.514 n n n ruditapes2_c3190 1.034 0.973 cytochrome c oxidase subunit iv 1.376 1.423 n n n ruditapes_c10620 1.036 0.973 1.208 1.252 n n n ruditapes_c26015 1.04 0.973 1.058 1.1 n n n ruditapes_c8932 1.063 0.973 0.491 0.522 n n n ruditapes2_lrc4115 1.063 0.973 0.49 0.521 n n n ruditapes_c28345 1.079 0.973 0.331 0.357 n n n ruditapes2_c3748 1.079 0.973 c-type lectin 0.314 0.339 n n n ruditapes_c18219 -1.112 0.973 0.254 0.229 n n n ruditapes_c19528 -1.112 0.973 0.253 0.228 n n n ruditapes_c17806 -1.112 0.973 dipeptidase 1 /// 0044237 // cellular metabolic process /// 0005488 // binding /// 0008238 // exopeptidase activity 0.246 0.221 n n n ruditapes_lrc34434 -1.112 0.973 coiled-coil-helix-coiled-coil-helix domain containing 3 0.24 0.216 n n n ruditapes_c12645 -1.112 0.973 0.239 0.215 n n n ruditapes_c22051 -1.112 0.973 0.238 0.214 n n n ruditapes2_lrc1565 -1.112 0.973 calmodulin /// 0042981 // regulation of apoptosis /// 0043277 // apoptotic cell clearance /// 0030424 // axon /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0040010 // positive regulation of growth rate /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0051726 // regulation of cell cycle /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0045211 // postsynaptic membrane /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005737 // cytoplasm /// 0007616 // long-term memory /// 0004683 // calmodulin-dependent protein kinase activity /// 0016061 // regulation of light-activated channel activity /// 0016028 // rhabdomere /// 0016477 // cell migration /// 0030425 // dendrite /// 0009792 // embryonic development ending in birth or egg hatching /// 0007052 // mitotic spindle organization 0.236 0.212 n n n ruditapes_lrc39263 1.124 0.973 calcium binding protein 2 0.145 0.163 n n n ruditapes_c11480 1.124 0.973 0.142 0.159 n n n ruditapes_c18181 1.124 0.973 0.142 0.159 n n n ruditapes_c25968 1.124 0.973 glycerol-3-phosphate dehydrogenase 0.136 0.153 n n n ruditapes2_c5869 -1.015 0.974 40s ribosomal protein s9 /// 0015935 // small ribosomal subunit /// 0019843 // rRNA binding /// 0006412 // translation /// 0003735 // structural constituent of ribosome 32.627 32.141 n n n ruditapes_c9600 1.003 0.974 20.659 20.726 n n n ruditapes_c10751 1.007 0.974 10.929 11.005 n n n ruditapes2_c284 -1.021 0.974 eukaryotic translation initiation factor subunit h /// 0005852 // eukaryotic translation initiation factor 3 complex /// 0006446 // regulation of translational initiation /// 0032403 // protein complex binding /// 0005829 // cytosol /// 0005792 // microsome 10.977 10.75 n n n ruditapes_c15655 1.01 0.974 7.566 7.644 n n n ruditapes_c7816 1.023 0.974 2.407 2.464 n n n ruditapes2_c2333 1.028 0.974 proteasome alpha 6 subunit /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005739 // mitochondrion /// 0005634 // nucleus /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005829 // cytosol /// 0003723 // RNA binding /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 1.808 1.858 n n n ruditapes_c27774 -1.044 0.974 1.703 1.631 n n n ruditapes_c28860 -1.046 0.974 mgc84531 protein 1.405 1.343 n n n ruditapes_c3863 1.034 0.974 1.288 1.333 n n n ruditapes_c611 -1.048 0.974 pancreatic lipase-related protein /// 0051384 // response to glucocorticoid stimulus /// 0005515 // protein binding /// 0005615 // extracellular space /// 0009791 // post-embryonic development /// 0043434 // response to peptide hormone stimulus 1.349 1.287 n n n ruditapes_c14629 1.038 0.974 wd repeat domain 1 /// 0005856 // cytoskeleton /// 0050789 // regulation of biological process /// 0008154 // actin polymerization or depolymerization 1.072 1.113 n n n ruditapes_s39232 -1.053 0.974 1.092 1.037 n n n ruditapes_lrc37863 -1.059 0.974 ribosomal protein s15 /// 0005622 // intracellular 0.836 0.789 n n n ruditapes2_lrc3591 1.068 0.974 0.384 0.411 n n n ruditapes_c19379 1.079 0.974 0.308 0.332 n n n ruditapes_c10405 1.079 0.974 0.3 0.323 n n n ruditapes_lrc35673 -1.112 0.974 0.235 0.212 n n n ruditapes_c10348 -1.112 0.974 0.234 0.21 n n n ruditapes_c18505 -1.112 0.974 0.234 0.21 n n n ruditapes_c11929 -1.112 0.974 0.233 0.21 n n n ruditapes_c14074 -1.112 0.974 0.233 0.209 n n n ruditapes2_lrc5076 -1.112 0.974 0.23 0.207 n n n ruditapes_c4482 -1.112 0.974 0.23 0.207 n n n ruditapes2_c4534 -1.112 0.974 0.228 0.205 n n n ruditapes_c17795 -1.112 0.974 0.227 0.204 n n n ruditapes_c29450 -1.112 0.974 0.225 0.202 n n n ruditapes2_lrc5060 -1.112 0.974 kallikrein plasma (fletcher factor) 1 /// 0031639 // plasminogen activation /// 0005615 // extracellular space /// 0051919 // positive regulation of fibrinolysis /// 0005737 // cytoplasm /// 0008233 // peptidase activity 0.223 0.201 n n n ruditapes_c20727 -1.112 0.974 0.223 0.2 n n n ruditapes_c11725 1.124 0.974 0.13 0.146 n n n ruditapes2_c1067 1.124 0.974 0.127 0.143 n n n ruditapes_c7589 -1.016 0.975 22.342 21.986 n n n ruditapes_c2965 1.007 0.975 10.135 10.209 n n n ruditapes2_c100 -1.027 0.975 lps-induced tnf-alpha factor 5.101 4.966 n n n ruditapes_c3932 -1.027 0.975 4.874 4.745 n n n ruditapes_c14666 -1.038 0.975 member ras oncogene family /// 0006810 // transport /// 0005794 // Golgi apparatus /// 0009987 // cellular process 2.251 2.169 n n n ruditapes_c4967 -1.038 0.975 2.211 2.131 n n n ruditapes_c2065 1.028 0.975 1.601 1.646 n n n ruditapes2_c1253 -1.046 0.975 1.334 1.275 n n n ruditapes_c14898 1.038 0.975 0.968 1.005 n n n ruditapes2_c1278 -1.053 0.975 0.953 0.905 n n n ruditapes_c12968 -1.059 0.975 trna 2 -phosphotransferase 1 "/// 0016772 // transferase activity, transferring phosphorus-containing groups /// 0008665 // 2'-phosphotransferase activity /// 0006388 // tRNA splicing, via endonucleolytic cleavage and ligation" 0.813 0.767 n n n ruditapes_lrc16417 1.049 0.975 0.623 0.654 n n n ruditapes_c3986 1.068 0.975 allograft inflammatory factor 1 /// 0043229 // intracellular organelle /// 0009987 // cellular process 0.358 0.382 n n n ruditapes_c23007 -1.112 0.975 0.217 0.195 n n n ruditapes_s39556 -1.112 0.975 calcium binding protein 2 0.217 0.195 n n n ruditapes2_lrc6980 -1.112 0.975 0.215 0.194 n n n ruditapes_c31369 -1.112 0.975 0.215 0.194 n n n ruditapes_s40209 -1.112 0.975 0.212 0.191 n n n ruditapes_s34488 -1.112 0.975 0.21 0.189 n n n ruditapes_c11327 -1.112 0.975 predicted protein [Nematostella vectensis] 0.205 0.184 n n n ruditapes_s34242 -1.112 0.975 0.204 0.183 n n n ruditapes2_lrc4311 1.124 0.975 cysteine protease inhibitor 0.123 0.138 n n n ruditapes_c21888 1.124 0.975 0.122 0.137 n n n ruditapes_lrc32955 1.124 0.975 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.121 0.136 n n n ruditapes_lrc34227 1.124 0.975 cathepsin l precursor 0.12 0.135 n n n ruditapes_lrc35165 1.124 0.975 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.12 0.135 n n n ruditapes_c26234 1.124 0.975 0.119 0.133 n n n ruditapes_lrc20700 1.124 0.975 serine proteinase 0.117 0.131 n n n ruditapes2_c3370 1.002 0.976 20.834 20.886 n n n ruditapes2_c4556 -1.017 0.976 ependymin related protein 1 precursor 17.051 16.762 n n n ruditapes_c17043 1.003 0.976 16.534 16.592 n n n ruditapes_c12941 1.019 0.976 2.78 2.832 n n n ruditapes_c18 -1.034 0.976 2.673 2.586 n n n ruditapes_c24722 1.022 0.976 2.276 2.326 n n n ruditapes2_c1416 1.025 0.976 1.863 1.91 n n n ruditapes_c13023 -1.044 0.976 1.463 1.401 n n n ruditapes_c10137 -1.046 0.976 1.289 1.232 n n n ruditapes_c16835 -1.046 0.976 1.26 1.204 n n n ruditapes_c14575 -1.053 0.976 0.943 0.895 n n n ruditapes2_lrc5343 1.049 0.976 developmentally-regulated vdg3 0.601 0.63 n n n ruditapes2_c3489 1.079 0.976 0.263 0.283 n n n ruditapes_lrc37274 1.079 0.976 tandem repeat galectin 0.254 0.274 n n n ruditapes_c13431 -1.112 0.976 karyopherin alpha 6 /// 0005488 // binding /// 0005643 // nuclear pore /// 0006606 // protein import into nucleus /// 0005737 // cytoplasm /// 0008565 // protein transporter activity 0.199 0.179 n n n ruditapes2_c2217 -1.112 0.976 low-density lipoprotein receptor 0.198 0.178 n n n ruditapes_c21450 -1.112 0.976 0.198 0.178 n n n ruditapes_s39745 -1.112 0.976 0.197 0.177 n n n ruditapes_s36484 -1.112 0.976 beta-ig-h3 fasciclin 0.191 0.172 n n n ruditapes_s40333 -1.112 0.976 0.191 0.172 n n n ruditapes_c22760 -1.112 0.976 0.19 0.171 n n n ruditapes_c10470 -1.112 0.976 0.189 0.17 n n n ruditapes2_lrc4141 1.124 0.976 cysteine protease inhibitor 0.116 0.13 n n n ruditapes_lrc38657 1.124 0.976 0.111 0.125 n n n ruditapes_c9548 1.124 0.976 0.108 0.121 n n n ruditapes2_c3077 1.006 0.977 10.57 10.629 n n n ruditapes_c30992 1.01 0.977 aldehyde dehydrogenase 1 member a2 /// 0055114 // oxidation reduction /// 0007399 // nervous system development /// 0065008 // regulation of biological quality /// 0016491 // oxidoreductase activity /// 0048513 // organ development /// 0048468 // cell development /// 0009653 // anatomical structure morphogenesis 5.981 6.039 n n n ruditapes_c24594 1.014 0.977 3.648 3.701 n n n ruditapes_c7071 1.015 0.977 3.56 3.614 n n n ruditapes_c15455 -1.031 0.977 2.808 2.723 n n n ruditapes_c8377 1.028 0.977 gamma complex associated protein 4 /// 0005200 // structural constituent of cytoskeleton /// 0000922 // spindle pole /// 0005813 // centrosome /// 0006461 // protein complex assembly /// 0005874 // microtubule /// 0008274 // gamma-tubulin ring complex /// 0007020 // microtubule nucleation 1.436 1.476 n n n ruditapes_c20406 1.028 0.977 1.391 1.43 n n n ruditapes_s34927 1.028 0.977 glutathione s-transferase pi class a /// 0006749 // glutathione metabolic process /// 0004364 // glutathione transferase activity /// 0005515 // protein binding /// 0032502 // developmental process 1.363 1.401 n n n ruditapes_c15316 1.041 0.977 xotch protein - african clawed frog 0.745 0.776 n n n ruditapes_c21978 -1.059 0.977 0.669 0.632 n n n ruditapes_lrc35154 -1.059 0.977 0.667 0.63 n n n ruditapes_c23412 1.049 0.977 0.549 0.576 n n n ruditapes2_lrc6651 1.049 0.977 ubiquinol-cytochrome c reductase binding protein /// 0006119 // oxidative phosphorylation /// 0022900 // electron transport chain /// 0005746 // mitochondrial respiratory chain 0.54 0.567 n n n ruditapes_c13975 1.049 0.977 rna polymerase i polypeptide b /// 0046872 // metal ion binding /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0016779 // nucleotidyltransferase activity 0.533 0.559 n n n ruditapes_c23181 1.049 0.977 0.529 0.555 n n n ruditapes_c6036 -1.112 0.977 beta 2c /// 0005856 // cytoskeleton /// 0005525 // GTP binding /// 0042267 // natural killer cell mediated cytotoxicity /// 0006928 // cell motion /// 0051082 // unfolded protein binding /// 0042288 // MHC class I protein binding 0.184 0.165 n n n ruditapes_c19235 -1.112 0.977 0.183 0.165 n n n ruditapes_lrc27697 -1.112 0.977 0.183 0.164 n n n ruditapes_c25705 -1.112 0.977 loc495415 protein 0.182 0.163 n n n ruditapes2_c7611 -1.112 0.977 mitochondrial 50s ribosomal protein 0.179 0.161 n n n ruditapes_s34368 -1.112 0.977 0.176 0.158 n n n ruditapes2_c1980 -1.112 0.977 hypothetical protein BRAFLDRAFT_76550 [Branchiostoma floridae] 0.175 0.157 n n n ruditapes_s36747 -1.112 0.977 0.175 0.157 n n n ruditapes_s39632 -1.112 0.977 0.174 0.157 n n n ruditapes_c23146 -1.112 0.977 brain rptpmam4 isoform ii 0.172 0.155 n n n ruditapes_c35230 1.124 0.977 0.104 0.117 n n n ruditapes_c31380 1.124 0.977 0.103 0.116 n n n ruditapes_c12995 1.124 0.977 mucin partial /// 0005488 // binding /// 0007155 // cell adhesion 0.1 0.112 n n n ruditapes_lrc35761 1.124 0.977 0.098 0.11 n n n ruditapes2_c2256 -1.011 0.978 86.532 85.591 n n n ruditapes_c8145 -1.016 0.978 chaperonin containing subunit 3 /// 0005524 // ATP binding /// 0005832 // chaperonin-containing T-complex /// 0005856 // cytoskeleton /// 0005634 // nucleus /// 0005886 // plasma membrane /// 0051082 // unfolded protein binding /// 0006457 // protein folding 19.361 19.062 n n n ruditapes2_c990 -1.019 0.978 10.043 9.851 n n n ruditapes2_lrc4828 1.008 0.978 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 6.856 6.912 n n n ruditapes_c15044 1.009 0.978 6.143 6.197 n n n ruditapes_c28541 1.011 0.978 5.251 5.306 n n n ruditapes_c28831 1.012 0.978 4.566 4.619 n n n ruditapes_c24844 -1.026 0.978 4.325 4.214 n n n ruditapes_c26875 -1.026 0.978 4.101 3.996 n n n ruditapes_c29664 1.015 0.978 alpha-glucosidase-like protein 3.056 3.103 n n n ruditapes_c18590 1.022 0.978 mana_myted ame: full=mannan endo- -beta-mannosidase ame: full=beta-mannanase ame: full=endo-beta- -mannanase short= flags: precursor /// 0003824 // catalytic activity /// 0008152 // metabolic process 1.871 1.912 n n n ruditapes_c15587 1.022 0.978 mitochondrial ribosomal protein l42 /// 0005739 // mitochondrion /// 0005840 // ribosome 1.838 1.879 n n n ruditapes_c23083 -1.038 0.978 1.692 1.63 n n n ruditapes_c18116 -1.038 0.978 1.685 1.624 n n n ruditapes_c14239 -1.042 0.978 1.256 1.205 n n n ruditapes_c24794 -1.046 0.978 1.079 1.031 n n n ruditapes_c19854 1.034 0.978 antigen b membrane protein 0.954 0.987 n n n ruditapes_c23710 -1.059 0.978 0.61 0.576 n n n ruditapes_c26781 -1.059 0.978 methyltransferase like 1 /// 0016740 // transferase activity 0.596 0.562 n n n ruditapes_lrc32680 1.049 0.978 ribosomal protein s8 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.488 0.512 n n n ruditapes_c7795 1.049 0.978 tyrosine 3-monooxygenase tryptophan 5-monooxygenase activation eta polypeptide /// 0044238 // primary metabolic process /// 0044249 // cellular biosynthetic process /// 0031323 // regulation of cellular metabolic process /// 0005102 // receptor binding /// 0007165 // signal transduction 0.48 0.504 n n n ruditapes_c15776 1.049 0.978 0.477 0.501 n n n ruditapes_c11917 1.049 0.978 trove domain member 2 /// 0005634 // nucleus /// 0005515 // protein binding /// 0003676 // nucleic acid binding 0.472 0.496 n n n ruditapes_c24044 -1.112 0.978 0.169 0.152 n n n ruditapes_c1853 -1.112 0.978 countin-like protein 0.168 0.151 n n n ruditapes_c19125 -1.112 0.978 0.168 0.151 n n n ruditapes_c29457 -1.112 0.978 0.168 0.151 n n n ruditapes_c39431 -1.112 0.978 myc homolog 0.167 0.15 n n n ruditapes_s40043 -1.112 0.978 0.167 0.15 n n n ruditapes_c10842 -1.112 0.978 alkaline phosphatase /// 0016791 // phosphatase activity /// 0008152 // metabolic process 0.166 0.149 n n n ruditapes_lrc20302 -1.112 0.978 0.165 0.148 n n n ruditapes_c29028 -1.112 0.978 0.164 0.147 n n n ruditapes_c12137 -1.112 0.978 0.163 0.147 n n n ruditapes_c24566 -1.112 0.978 0.163 0.147 n n n ruditapes_c7445 -1.112 0.978 serine protease inhibitor 0.162 0.146 n n n ruditapes_s37698 -1.112 0.978 protein 0.161 0.145 n n n ruditapes_c14151 -1.112 0.978 0.16 0.144 n n n ruditapes_c21980 -1.112 0.978 0.16 0.144 n n n ruditapes_lrc33275 -1.112 0.978 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity 0.157 0.141 n n n ruditapes_c17899 -1.112 0.978 0.156 0.14 n n n ruditapes_c26501 -1.112 0.978 cd209d antigen 0.156 0.14 n n n ruditapes_lrc6842 1.124 0.978 0.097 0.11 n n n ruditapes_c2727 1.124 0.978 0.094 0.106 n n n ruditapes_c7327 1.124 0.978 0.092 0.104 n n n ruditapes_lrc34596 -1.023 0.979 ubiquitin a-52 residue ribosomal protein fusion product 1 "/// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0006355 // regulation of transcription, DNA-dependent /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005811 // lipid particle /// 0006950 // response to stress /// 0006414 // translational elongation /// 0042254 // ribosome biogenesis /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0022625 // cytosolic large ribosomal subunit /// 0030433 // ER-associated protein catabolic process /// 0030528 // transcription regulator activity /// 0016567 // protein ubiquitination /// 0006325 // chromatin organization /// 0003735 // structural constituent of ribosome /// 0048167 // regulation of synaptic plasticity /// 0007411 // axon guidance /// 0045941 // positive regulation of transcription /// 0042062 // long-term strengthening of neuromuscular junction" 5.606 5.481 n n n ruditapes_c23333 1.01 0.979 5.18 5.231 n n n ruditapes_c16154 -1.031 0.979 2.356 2.284 n n n ruditapes_c4125 1.022 0.979 1.738 1.776 n n n ruditapes_c23955 1.022 0.979 1.722 1.76 n n n ruditapes_lrc20994 1.024 0.979 1.426 1.461 n n n ruditapes_c24435 -1.042 0.979 1.146 1.099 n n n ruditapes_c9789 1.032 0.979 unc-119 homolog b /// 0007399 // nervous system development 0.934 0.964 n n n ruditapes_c30246 1.038 0.979 0.728 0.755 n n n ruditapes_c10053 -1.053 0.979 0.7 0.665 n n n ruditapes_lrc32593 -1.053 0.979 cysteine-rich protein 1 /// 0008283 // cell proliferation /// 0005737 // cytoplasm /// 0008270 // zinc ion binding 0.674 0.64 n n n ruditapes_c29455 -1.059 0.979 0.536 0.506 n n n ruditapes_c21054 1.049 0.979 0.469 0.492 n n n ruditapes_c20123 1.049 0.979 0.468 0.491 n n n ruditapes_c10606 1.049 0.979 0.438 0.46 n n n ruditapes_c13243 1.079 0.979 0.191 0.206 n n n ruditapes_c25659 -1.112 0.979 0.154 0.138 n n n ruditapes_lrc37314 -1.112 0.979 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0005739 // mitochondrion /// 0015992 // proton transport /// 0016020 // membrane /// 0005515 // protein binding 0.152 0.136 n n n ruditapes_c18373 -1.112 0.979 0.15 0.135 n n n ruditapes_c12311 -1.112 0.979 0.15 0.134 n n n ruditapes2_lrc4568 -1.112 0.979 leucine rich repeat containing 59 /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid 0.147 0.132 n n n ruditapes_c22556 -1.112 0.979 0.147 0.132 n n n ruditapes_lrc12934 -1.112 0.979 0.147 0.132 n n n ruditapes_c11024 -1.112 0.979 0.146 0.131 n n n ruditapes_c7807 -1.112 0.979 0.146 0.131 n n n ruditapes2_c3392 -1.112 0.979 yd repeat protein 0.144 0.13 n n n ruditapes_c11869 -1.112 0.979 0.144 0.129 n n n ruditapes_lrc25300 -1.112 0.979 0.142 0.127 n n n ruditapes_c12900 1.124 0.979 0.088 0.099 n n n ruditapes_c1376 1.124 0.979 peptidoglycan-recognition protein precursor 0.086 0.097 n n n ruditapes_c9670 1.001 0.98 21.645 21.66 n n n ruditapes_c5538 -1.014 0.98 beta tubulin /// 0005198 // structural molecule activity /// 0051258 // protein polymerization /// 0005525 // GTP binding /// 0003924 // GTPase activity /// 0043234 // protein complex /// 0005874 // microtubule /// 0007018 // microtubule-based movement 21.297 20.993 n n n ruditapes_c17654 1.007 0.98 6.932 6.98 n n n ruditapes_c14200 -1.022 0.98 5.534 5.414 n n n ruditapes_c17676 -1.026 0.98 tgf-beta-inducible nuclear protein 1 3.417 3.33 n n n ruditapes_c14381 1.015 0.98 2.627 2.666 n n n ruditapes_lrc26372 1.015 0.98 2.547 2.585 n n n ruditapes_c25883 1.028 0.98 1.1 1.131 n n n ruditapes_c8235 1.034 0.98 0.77 0.796 n n n ruditapes2_c1578 1.04 0.98 0.606 0.631 n n n ruditapes_c22235 -1.053 0.98 0.655 0.622 n n n ruditapes_c14814 1.049 0.98 0.425 0.445 n n n ruditapes_c8545 1.049 0.98 0.421 0.441 n n n ruditapes_c16638 -1.112 0.98 0.14 0.126 n n n ruditapes_s39521 -1.112 0.98 0.14 0.126 n n n ruditapes_c14428 -1.112 0.98 0.139 0.125 n n n ruditapes_c30758 -1.112 0.98 0.136 0.122 n n n ruditapes_c12351 -1.112 0.98 0.132 0.119 n n n ruditapes_c28392 -1.112 0.98 0.132 0.119 n n n ruditapes_c26177 -1.112 0.98 0.13 0.117 n n n ruditapes2_c1470 1.124 0.98 0.08 0.09 n n n ruditapes_lrc32339 1.124 0.98 heat shock protein 0.077 0.087 n n n ruditapes_lrc35026 1.004 0.981 9.91 9.951 n n n ruditapes_c28292 -1.018 0.981 8.389 8.238 n n n ruditapes_c28693 1.005 0.981 7.951 7.992 n n n ruditapes_c25922 1.005 0.981 7.473 7.513 n n n ruditapes_lrc35786 -1.02 0.981 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 6.887 6.751 n n n ruditapes_c25633 1.006 0.981 6.243 6.283 n n n ruditapes_c25899 -1.022 0.981 4.925 4.817 n n n ruditapes2_c949 -1.023 0.981 4.153 4.058 n n n ruditapes_c22495 -1.024 0.981 3.995 3.901 n n n ruditapes_c35357 1.012 0.981 3.299 3.338 n n n ruditapes_c11694 1.014 0.981 mechanosensory abnormality family member (mec-2) /// 0007638 // mechanosensory behavior /// 0043005 // neuron projection 2.469 2.504 n n n ruditapes_c14875 -1.028 0.981 2.434 2.366 n n n ruditapes_lrc11688 -1.032 0.981 1.878 1.819 n n n ruditapes_c19826 -1.034 0.981 1.667 1.612 n n n ruditapes_c31442 1.022 0.981 1.333 1.362 n n n ruditapes_c21643 -1.038 0.981 1.288 1.241 n n n ruditapes_c21650 1.024 0.981 1.201 1.23 n n n ruditapes2_c1215 -1.042 0.981 0.954 0.915 n n n ruditapes_c8421 1.049 0.981 pancreatic lipase-related protein partial 0.377 0.395 n n n ruditapes_c15391 1.049 0.981 0.353 0.37 n n n ruditapes2_lrc3402 -1.112 0.981 0.127 0.114 n n n ruditapes2_c14 -1.112 0.981 0.126 0.114 n n n ruditapes_c704 -1.112 0.981 0.125 0.112 n n n ruditapes_lrc25909 -1.112 0.981 0.123 0.11 n n n ruditapes2_lrc4476 -1.112 0.981 kallikrein plasma (fletcher factor) 1 /// 0003824 // catalytic activity /// 0009611 // response to wounding 0.121 0.109 n n n ruditapes_c8112 -1.112 0.981 0.119 0.107 n n n ruditapes_c8455 -1.112 0.981 0.119 0.107 n n n ruditapes2_c2132 -1.112 0.981 hypothetical protein BRAFLDRAFT_75508 [Branchiostoma floridae] 0.118 0.106 n n n ruditapes_c7917 -1.112 0.981 0.117 0.105 n n n ruditapes2_c1107 -1.112 0.981 0.115 0.104 n n n ruditapes_c28377 -1.112 0.981 alpha macroglobulin 0.115 0.104 n n n ruditapes_c1300 1.124 0.981 g protein-coupled /// 0004983 // neuropeptide Y receptor activity /// 0016021 // integral to membrane /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0050254 // rhodopsin kinase activity 0.07 0.078 n n n ruditapes_lrc7926 1.124 0.981 0.07 0.078 n n n ruditapes_c18789 1.001 0.982 17.821 17.835 n n n ruditapes_c831 -1.016 0.982 "PREDICTED: similar to predicted protein, partial [Hydra magnipapillata]" 12.617 12.418 n n n ruditapes_c924 1.004 0.982 8.331 8.365 n n n ruditapes_c8047 -1.02 0.982 6.672 6.544 n n n ruditapes_c15205 -1.022 0.982 4.644 4.543 n n n ruditapes_c15598 -1.022 0.982 4.303 4.21 n n n ruditapes_c27649 1.01 0.982 3.702 3.738 n n n ruditapes2_c2513 -1.025 0.982 sjchgc01974 protein 3.344 3.264 n n n ruditapes_c15585 -1.028 0.982 2.319 2.254 n n n ruditapes_c21263 1.017 0.982 1.771 1.801 n n n ruditapes_c16364 -1.034 0.982 1.504 1.454 n n n ruditapes_c30996 1.022 0.982 1.202 1.228 n n n ruditapes_c27111 1.024 0.982 1.079 1.105 n n n ruditapes_c9623 -1.038 0.982 1.13 1.089 n n n ruditapes2_c2350 -1.046 0.982 0.683 0.653 n n n ruditapes_c8871 -1.046 0.982 0.671 0.642 n n n ruditapes_c37548 1.034 0.982 regucalcin 0.6 0.621 n n n ruditapes_lrc32405 1.034 0.982 0.578 0.598 n n n ruditapes_c4945 1.049 0.982 0.326 0.342 n n n ruditapes_lrc35507 1.049 0.982 0.318 0.334 n n n ruditapes_c17548 1.049 0.982 0.314 0.33 n n n ruditapes_c23663 -1.112 0.982 0.115 0.103 n n n ruditapes_c26542 -1.112 0.982 0.113 0.102 n n n ruditapes2_c7049 -1.112 0.982 0.113 0.101 n n n ruditapes_c1923 -1.112 0.982 0.11 0.099 n n n ruditapes_c27118 -1.112 0.982 0.11 0.099 n n n ruditapes_lrc36392 -1.112 0.982 0.109 0.098 n n n ruditapes_c18197 -1.112 0.982 0.108 0.097 n n n ruditapes_c23976 -1.112 0.982 0.108 0.097 n n n ruditapes_lrc33872 -1.112 0.982 0.108 0.097 n n n ruditapes_c6978 -1.112 0.982 0.107 0.096 n n n ruditapes_lrc16694 -1.112 0.982 0.107 0.096 n n n ruditapes2_c117 -1.112 0.982 mitogen-activated protein kinase kinase 1-interacting protein 1 /// 0005515 // protein binding 0.106 0.095 n n n ruditapes_c14805 -1.112 0.982 0.106 0.095 n n n ruditapes_c15514 -1.112 0.982 0.104 0.093 n n n ruditapes_c22956 -1.112 0.982 0.103 0.093 n n n ruditapes_c29395 -1.112 0.982 0.103 0.093 n n n ruditapes_s37700 -1.112 0.982 0.103 0.093 n n n ruditapes_c8269 -1.014 0.983 18.648 18.393 n n n ruditapes_c7849 1.002 0.983 11.796 11.82 n n n ruditapes_c9225 -1.021 0.983 4.485 4.392 n n n ruditapes_c31055 -1.022 0.983 4.101 4.012 n n n ruditapes2_c3045 1.012 0.983 2.704 2.736 n n n ruditapes_c18879 -1.03 0.983 1.949 1.893 n n n ruditapes_c22034 -1.03 0.983 1.929 1.874 n n n ruditapes_c17298 -1.03 0.983 1.921 1.866 n n n ruditapes_c17648 1.017 0.983 1.75 1.779 n n n ruditapes_c17490 -1.032 0.983 1.441 1.396 n n n ruditapes_lrc24643 -1.032 0.983 1.429 1.384 n n n ruditapes_c2268 -1.034 0.983 1.279 1.237 n n n ruditapes_c20382 -1.046 0.983 0.645 0.616 n n n ruditapes_c23093 -1.046 0.983 atg12 autophagy related 12 homolog ( cerevisiae) /// 0019941 // modification-dependent protein catabolic process /// 0005624 // membrane fraction /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005625 // soluble fraction /// 0005737 // cytoplasm /// 0000045 // autophagic vacuole formation 0.645 0.616 n n n ruditapes_c22481 -1.046 0.983 0.639 0.611 n n n ruditapes_c16436 -1.046 0.983 0.621 0.593 n n n ruditapes2_c1122 -1.046 0.983 0.617 0.59 n n n ruditapes_c14958 -1.046 0.983 chromosome 6 open reading frame 125 0.609 0.582 n n n ruditapes_c22681 -1.046 0.983 0.604 0.577 n n n ruditapes_lrc8201 1.034 0.983 calmodulin /// 0005524 // ATP binding /// 0005516 // calmodulin binding /// 0005513 // detection of calcium ion /// 0030424 // axon /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0051383 // kinetochore organization /// 0007268 // synaptic transmission /// 0008049 // male courtship behavior /// 0032036 // myosin heavy chain binding /// 0005634 // nucleus /// 0051533 // positive regulation of NFAT protein import into nucleus /// 0006468 // protein amino acid phosphorylation /// 0048786 // presynaptic active zone /// 0005886 // plasma membrane /// 0045211 // postsynaptic membrane /// 0005876 // spindle microtubule /// 0031432 // titin binding /// 0051489 // regulation of filopodium assembly /// 0000922 // spindle pole /// 0016060 // metarhodopsin inactivation /// 0005829 // cytosol /// 0004721 // phosphoprotein phosphatase activity /// 0005813 // centrosome /// 0016062 // adaptation of rhodopsin mediated signaling /// 0008270 // zinc ion binding /// 0007528 // neuromuscular junction development /// 0005954 // calcium- and calmodulin-dependent protein kinase complex /// 0007616 // long-term memory /// 0005246 // calcium channel regulator activity /// 0005506 // iron ion binding /// 0004683 // calmodulin-dependent protein kinase activity /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0016061 // regulation of light-activated channel activity /// 0043388 // positive regulation of DNA binding /// 0016028 // rhabdomere /// 0030425 // dendrite /// 0007052 // mitotic spindle organization 0.533 0.551 n n n ruditapes_c17237 -1.053 0.983 calmodulin 0.475 0.451 n n n ruditapes_c29201 1.049 0.983 0.309 0.325 n n n ruditapes_c37693 1.049 0.983 0.309 0.325 n n n ruditapes_c24923 1.049 0.983 0.284 0.298 n n n ruditapes_c30059 1.049 0.983 0.278 0.292 n n n ruditapes_c21211 -1.112 0.983 0.103 0.092 n n n ruditapes_c24163 -1.112 0.983 0.102 0.092 n n n ruditapes_lrc8854 -1.112 0.983 0.102 0.091 n n n ruditapes2_c1115 -1.112 0.983 0.101 0.091 n n n ruditapes2_lrc4776 -1.112 0.983 0.1 0.09 n n n ruditapes_c7415 -1.112 0.983 0.1 0.09 n n n ruditapes2_lrc4290 -1.112 0.983 0.099 0.089 n n n ruditapes_c14105 -1.112 0.983 0.099 0.089 n n n ruditapes_c31582 -1.112 0.983 0.098 0.088 n n n ruditapes2_c417 -1.112 0.983 0.097 0.087 n n n ruditapes_lrc38115 -1.112 0.983 0.096 0.086 n n n ruditapes_c5057 -1.112 0.983 vitelline membrane outer layer 1 homolog 0.095 0.085 n n n ruditapes_c3744 -1.112 0.983 0.094 0.085 n n n ruditapes_s40420 -1.112 0.983 0.094 0.085 n n n ruditapes2_c7352 -1.112 0.983 0.094 0.084 n n n ruditapes_c13578 -1.112 0.983 0.093 0.084 n n n ruditapes_c15290 -1.112 0.983 0.092 0.083 n n n ruditapes_c25721 -1.112 0.983 0.092 0.083 n n n ruditapes_c3111 -1.002 0.984 40.116 40.021 n n n ruditapes_c27834 -1.014 0.984 14.605 14.397 n n n ruditapes_c4600 1.005 0.984 6.031 6.059 n n n ruditapes_c1291 -1.021 0.984 4.01 3.926 n n n ruditapes_c29342 -1.023 0.984 3.156 3.085 n n n ruditapes_c27740 -1.024 0.984 2.779 2.714 n n n ruditapes_c6482 1.012 0.984 proteasome subunit beta type-7 precursor /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 2.451 2.48 n n n ruditapes_c8242 1.012 0.984 2.435 2.464 n n n ruditapes2_c1988 -1.026 0.984 2.273 2.214 n n n ruditapes_c7145 -1.026 0.984 novel protein vertebrate complement component 3 2.159 2.103 n n n ruditapes_c20495 -1.031 0.984 1.487 1.443 n n n ruditapes_c31357 -1.031 0.984 hypothetical protein BRAFLDRAFT_119002 [Branchiostoma floridae] 1.46 1.417 n n n ruditapes_c19333 -1.032 0.984 1.302 1.261 n n n ruditapes_c7954 1.02 0.984 apextrin 1.06 1.081 n n n ruditapes_c29528 -1.038 0.984 0.926 0.892 n n n ruditapes_c29106 -1.038 0.984 0.907 0.874 n n n ruditapes2_c1155 -1.038 0.984 0.906 0.873 n n n ruditapes_c11776 -1.042 0.984 0.716 0.687 n n n ruditapes_c26954 1.028 0.984 0.666 0.685 n n n ruditapes_c8130 -1.053 0.984 glutamine synthetase /// 0004356 // glutamate-ammonia ligase activity /// 0006542 // glutamine biosynthetic process 0.392 0.372 n n n ruditapes_c22626 1.049 0.984 0.272 0.285 n n n ruditapes_c7081 1.049 0.984 0.254 0.266 n n n ruditapes_s38420 1.049 0.984 protein 0.253 0.266 n n n ruditapes_c25068 1.049 0.984 0.246 0.258 n n n ruditapes_s38169 -1.112 0.984 0.092 0.082 n n n ruditapes_c13421 -1.112 0.984 0.091 0.082 n n n ruditapes_c24392 -1.112 0.984 0.091 0.082 n n n ruditapes_c2525 -1.112 0.984 0.09 0.081 n n n ruditapes_c5646 -1.112 0.984 g protein beta subunit- isoform cra_a /// 0032314 // regulation of Rac GTPase activity /// 0005515 // protein binding /// 0030838 // positive regulation of actin filament polymerization /// 0031931 // TORC1 complex /// 0005737 // cytoplasm /// 0031932 // TORC2 complex /// 0050731 // positive regulation of peptidyl-tyrosine phosphorylation 0.089 0.08 n n n ruditapes2_c3375 -1.112 0.984 wsc domain protein 0.088 0.079 n n n ruditapes_lrc38147 -1.112 0.984 0.087 0.078 n n n ruditapes_c25666 -1.112 0.984 0.086 0.078 n n n ruditapes2_lrc5951 -1.112 0.984 predicted protein [Physcomitrella patens subsp. patens] 0.086 0.077 n n n ruditapes_lrc35686 -1.112 0.984 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0004550 // nucleoside diphosphate kinase activity /// 0006228 // UTP biosynthetic process 0.086 0.077 n n n ruditapes_lrc34103 -1.112 0.984 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0.085 0.077 n n n ruditapes_c20304 -1.112 0.984 0.085 0.076 n n n ruditapes_lrc30318 -1.112 0.984 0.085 0.076 n n n ruditapes_s36622 -1.112 0.984 40s ribosomal protein s20 /// 0002119 // nematode larval development /// 0040018 // positive regulation of multicellular organism growth /// 0000003 // reproduction /// 0005840 // ribosome /// 0009792 // embryonic development ending in birth or egg hatching 0.084 0.076 n n n ruditapes_c25949 -1.112 0.984 0.084 0.075 n n n ruditapes_s36638 -1.112 0.984 0.083 0.074 n n n ruditapes2_lrc5786 -1.112 0.984 dynein light chain lc8-type 2 "/// 0005868 // cytoplasmic dynein complex /// 0007290 // spermatid nucleus elongation /// 0042623 // ATPase activity, coupled /// 0007476 // imaginal disc-derived wing morphogenesis /// 0016459 // myosin complex /// 0051017 // actin filament bundle formation /// 0005634 // nucleus /// 0043186 // P granule /// 0008407 // bristle morphogenesis /// 0005886 // plasma membrane /// 0008039 // synaptic target recognition /// 0007291 // sperm individualization /// 0005829 // cytosol /// 0005874 // microtubule /// 0008092 // cytoskeletal protein binding /// 0003777 // microtubule motor activity /// 0045505 // dynein intermediate chain binding /// 0042803 // protein homodimerization activity /// 0007018 // microtubule-based movement" 0.082 0.074 n n n ruditapes_s38424 -1.112 0.984 0.082 0.074 n n n ruditapes_s38815 -1.112 0.984 0.082 0.074 n n n ruditapes_c5940 -1.112 0.984 anaphase promoting complex subunit 13 0.082 0.073 n n n ruditapes_c13837 -1.112 0.984 0.081 0.073 n n n ruditapes_c18548 -1.112 0.984 0.081 0.073 n n n ruditapes_c19444 -1.112 0.984 0.081 0.073 n n n ruditapes_c8362 -1.112 0.984 0.081 0.073 n n n ruditapes_lrc38700 -1.112 0.984 galactoside- 8 /// 0005488 // binding /// 0044424 // intracellular part 0.081 0.073 n n n ruditapes_s39274 -1.112 0.984 prefoldin subunit 1 0.081 0.073 n n n ruditapes_c1003 -1.014 0.985 13.925 13.733 n n n ruditapes2_lrc3316 1.002 0.985 small nuclear ribonucleoprotein polypeptide g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0005829 // cytosol /// 0035195 // gene silencing by miRNA /// 0004672 // protein kinase activity /// 0000387 // spliceosomal snRNP biogenesis /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 10.179 10.196 n n n ruditapes_c26355 -1.018 0.985 6.512 6.399 n n n ruditapes_c8068 -1.019 0.985 5.024 4.933 n n n ruditapes_c21470 -1.019 0.985 4.896 4.803 n n n ruditapes_c16421 -1.021 0.985 3.515 3.442 n n n ruditapes2_c2191 1.008 0.985 myo-inositol oxygenase /// 0005488 // binding /// 0016491 // oxidoreductase activity 3.154 3.179 n n n ruditapes2_c3439 -1.024 0.985 2.434 2.377 n n n ruditapes_c14516 1.012 0.985 2.165 2.19 n n n ruditapes2_c302 -1.026 0.985 hypotheticial protein 1.988 1.937 n n n ruditapes_c26450 -1.031 0.985 1.407 1.365 n n n ruditapes_lrc14061 -1.03 0.985 actophorin related protein /// 0044424 // intracellular part 1.396 1.356 n n n ruditapes_c28823 -1.032 0.985 1.196 1.158 n n n ruditapes_c23498 1.022 0.985 0.899 0.919 n n n ruditapes2_c2309 1.022 0.985 fch domain only 2 0.83 0.849 n n n ruditapes_c5425 1.028 0.985 0.584 0.6 n n n ruditapes_c10157 1.028 0.985 0.581 0.597 n n n ruditapes_lrc34762 1.028 0.985 calcium binding protein 2 0.564 0.58 n n n ruditapes_c21787 1.028 0.985 0.556 0.571 n n n ruditapes_c12960 1.034 0.985 mitogen-activated protein kinase kinase 4 /// 0005524 // ATP binding /// 0032839 // dendrite cytoplasm /// 0004713 // protein tyrosine kinase activity /// 0031435 // mitogen-activated protein kinase kinase kinase binding /// 0005634 // nucleus /// 0043525 // positive regulation of neuron apoptosis /// 0008545 // JUN kinase kinase activity /// 0043204 // perikaryon /// 0045740 // positive regulation of DNA replication /// 0007257 // activation of JUN kinase activity /// 0004674 // protein serine/threonine kinase activity /// 0005829 // cytosol /// 0001934 // positive regulation of protein amino acid phosphorylation /// 0048263 // determination of dorsal identity /// 0033267 // axon part 0.451 0.467 n n n ruditapes2_c3827 -1.046 0.985 0.48 0.459 n n n ruditapes_c25648 -1.046 0.985 0.466 0.445 n n n ruditapes_c8574 1.049 0.985 0.244 0.256 n n n ruditapes_c20030 1.049 0.985 0.242 0.254 n n n ruditapes_c23967 1.049 0.985 0.24 0.252 n n n ruditapes_c30665 1.049 0.985 0.239 0.25 n n n ruditapes_lrc34462 1.049 0.985 nadh dehydrogenase iron-sulfur protein mitochondrial precursor "/// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0009055 // electron carrier activity" 0.236 0.247 n n n ruditapes_c18371 1.049 0.985 0.234 0.245 n n n ruditapes_c13830 1.049 0.985 0.232 0.243 n n n ruditapes_c24471 1.049 0.985 0.23 0.241 n n n ruditapes_c12364 -1.112 0.985 0.081 0.073 n n n ruditapes_c18201 -1.112 0.985 0.081 0.073 n n n ruditapes_c20329 -1.112 0.985 wbscr27 partial 0.081 0.072 n n n ruditapes_c9615 -1.112 0.985 0.081 0.072 n n n ruditapes_lrc32695 -1.112 0.985 0.081 0.072 n n n ruditapes_s39018 -1.112 0.985 ubiquinol-cytochrome c reductase complex 14kd subunit /// 0005739 // mitochondrion /// 0016020 // membrane /// 0009987 // cellular process 0.081 0.072 n n n ruditapes_c12519 -1.112 0.985 0.08 0.072 n n n ruditapes_c17679 -1.112 0.985 0.08 0.072 n n n ruditapes_c21638 -1.112 0.985 0.08 0.072 n n n ruditapes_c28539 -1.112 0.985 0.08 0.072 n n n ruditapes_c4835 -1.112 0.985 0.08 0.072 n n n ruditapes_c11550 -1.112 0.985 0.079 0.071 n n n ruditapes_c12170 -1.112 0.985 0.079 0.071 n n n ruditapes_c12858 -1.112 0.985 galactokinase 1 /// 0005524 // ATP binding /// 0019402 // galactitol metabolic process /// 0004335 // galactokinase activity /// 0005794 // Golgi apparatus /// 0005624 // membrane fraction /// 0005515 // protein binding /// 0046835 // carbohydrate phosphorylation /// 0005829 // cytosol /// 0005534 // galactose binding /// 0006012 // galactose metabolic process 0.079 0.071 n n n ruditapes_c15291 -1.112 0.985 0.079 0.071 n n n ruditapes_c18698 -1.112 0.985 0.079 0.071 n n n ruditapes_c6716 -1.112 0.985 calmodulin /// 0006091 // generation of precursor metabolites and energy /// 0019904 // protein domain specific binding /// 0031997 // N-terminal myristoylation domain binding /// 0005886 // plasma membrane /// 0005876 // spindle microtubule /// 0016740 // transferase activity /// 0031432 // titin binding /// 0000922 // spindle pole /// 0005829 // cytosol /// 0051592 // response to calcium ion /// 0007049 // cell cycle /// 0005813 // centrosome /// 0008218 // bioluminescence /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0005246 // calcium channel regulator activity /// 0017022 // myosin binding /// 0005509 // calcium ion binding /// 0032465 // regulation of cytokinesis /// 0043388 // positive regulation of DNA binding 0.079 0.071 n n n ruditapes_c17831 -1.112 0.985 0.078 0.071 n n n ruditapes_c15417 -1.112 0.985 0.078 0.07 n n n ruditapes_c17400 -1.112 0.985 0.078 0.07 n n n ruditapes_c17538 -1.112 0.985 0.077 0.07 n n n ruditapes_c19435 -1.112 0.985 0.077 0.07 n n n ruditapes_c19775 -1.112 0.985 n-acetylglucosaminyltransferase vi 0.077 0.07 n n n ruditapes_s35756 -1.112 0.985 mitochondrial cytochrome c oxidase subunit 6b /// 0005739 // mitochondrion 0.077 0.07 n n n ruditapes_c14092 -1.112 0.985 0.077 0.069 n n n ruditapes_c17557 -1.112 0.985 0.077 0.069 n n n ruditapes_c19204 -1.112 0.985 0.077 0.069 n n n ruditapes_c26460 -1.112 0.985 0.077 0.069 n n n ruditapes_c30556 -1.112 0.985 0.077 0.069 n n n ruditapes_lrc27183 -1.112 0.985 0.076 0.069 n n n ruditapes_lrc34281 -1.112 0.985 macrophage migration inhibitory factor 2 0.076 0.068 n n n ruditapes_s40216 -1.112 0.985 glutathione s-transferase a 0.076 0.068 n n n ruditapes2_c725 -1.112 0.985 serine protease inhibitor 2 0.075 0.067 n n n ruditapes_c3709 -1.112 0.985 0.075 0.067 n n n ruditapes_c15660 -1.112 0.985 receptor-type tyrosine-protein phosphatase alpha 0.074 0.066 n n n ruditapes_c17524 -1.112 0.985 0.074 0.066 n n n ruditapes2_c925 -1.112 0.985 0.073 0.066 n n n ruditapes_c15371 -1.112 0.985 0.073 0.066 n n n ruditapes_c20459 -1.112 0.985 0.073 0.066 n n n ruditapes_c29642 -1.112 0.985 0.073 0.066 n n n ruditapes_c4892 -1.112 0.985 rna exonuclease 0.072 0.065 n n n ruditapes2_lrc5687 -1.112 0.985 elegans protein partially confirmed by transcript evidence /// 0005515 // protein binding 0.072 0.064 n n n ruditapes2_c1427 -1.112 0.985 0.071 0.064 n n n ruditapes2_c708 -1.112 0.985 0.071 0.064 n n n ruditapes_c9654 -1.013 0.986 13.909 13.724 n n n ruditapes2_lrc4658 1.006 0.986 3.709 3.732 n n n ruditapes2_c3216 -1.02 0.986 complement component q subcomponent-like 3 /// 0005488 // binding 3.673 3.601 n n n ruditapes_c26479 1.008 0.986 negative elongation factor e /// 0003676 // nucleic acid binding 2.772 2.793 n n n ruditapes_c11605 1.008 0.986 2.572 2.594 n n n ruditapes_c16332 -1.023 0.986 2.365 2.312 n n n ruditapes_c19242 -1.024 0.986 2.131 2.081 n n n ruditapes_c21669 1.012 0.986 1.826 1.848 n n n ruditapes_lrc35201 -1.026 0.986 mitochondrial ubiquinol cytochrome c reductase complex 1.77 1.725 n n n ruditapes2_c533 -1.026 0.986 proline-rich transmembrane protein 1 1.768 1.722 n n n ruditapes_c24235 -1.026 0.986 1.632 1.59 n n n ruditapes_c12209 -1.032 0.986 1.009 0.977 n n n ruditapes_c22422 1.019 0.986 bactericidal permeability increasing protein 0.874 0.891 n n n ruditapes_c24145 -1.038 0.986 0.68 0.655 n n n ruditapes_c13380 1.028 0.986 0.516 0.531 n n n ruditapes_lrc34444 -1.046 0.986 hypothetical protein [Schistosoma mansoni] 0.445 0.426 n n n ruditapes_c29860 -1.046 0.986 calmodulin am13 /// 0005515 // protein binding 0.442 0.422 n n n ruditapes2_c2361 1.034 0.986 poly (adp-ribose) polymerase member 14 0.357 0.369 n n n ruditapes_c31209 1.049 0.986 0.206 0.216 n n n ruditapes_c20294 -1.112 0.986 0.07 0.063 n n n ruditapes_lrc37934 -1.112 0.986 cytosolic malate dehydrogenase "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005975 // carbohydrate metabolic process /// 0044237 // cellular metabolic process" 0.07 0.063 n n n ruditapes_c16507 -1.112 0.986 0.069 0.062 n n n ruditapes_c8532 -1.112 0.986 0.069 0.062 n n n ruditapes_c15272 -1.112 0.986 0.068 0.061 n n n ruditapes_c12347 -1.112 0.986 0.067 0.06 n n n ruditapes2_lrc5064 -1.112 0.986 mitochondrial cytochrome c oxidase subunit 6b /// 0005751 // mitochondrial respiratory chain complex IV 0.066 0.06 n n n ruditapes_c22204 -1.112 0.986 0.066 0.059 n n n ruditapes2_lrc5868 -1.112 0.986 predicted protein [Physcomitrella patens subsp. patens] 0.065 0.058 n n n ruditapes_lrc36106 -1.112 0.986 0.065 0.058 n n n ruditapes_c14990 -1.112 0.986 0.064 0.058 n n n ruditapes_c16252 -1.112 0.986 beta-lactamase family protein 0.064 0.058 n n n ruditapes_c7736 -1.112 0.986 0.064 0.058 n n n ruditapes_lrc37603 -1.112 0.986 60s ribosomal protein l13a /// 0030529 // ribonucleoprotein complex 0.062 0.056 n n n ruditapes2_lrc6988 -1.112 0.986 0.062 0.055 n n n ruditapes_lrc34777 -1.112 0.986 0.062 0.055 n n n ruditapes_c23213 1 0.987 11.787 11.787 n n n ruditapes_c21050 -1.013 0.987 eukaryotic translation initiation factor subunit 6 interacting protein /// 0001650 // fibrillar center /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0006412 // translation /// 0003743 // translation initiation factor activity /// 0005737 // cytoplasm 11.74 11.585 n n n ruditapes2_c1178 -1.016 0.987 ribosomal protein s12 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0005829 // cytosol /// 0003735 // structural constituent of ribosome 6.775 6.668 n n n ruditapes2_c5757 -1.016 0.987 6.768 6.662 n n n ruditapes_c17833 -1.016 0.987 5.852 5.759 n n n ruditapes_c28998 1.009 0.987 2.16 2.18 n n n ruditapes_c18954 -1.023 0.987 2.075 2.029 n n n ruditapes_c26525 -1.026 0.987 1.514 1.475 n n n ruditapes_lrc27286 -1.026 0.987 1.497 1.458 n n n ruditapes_c23148 -1.026 0.987 1.447 1.41 n n n ruditapes_c22986 -1.026 0.987 1.42 1.384 n n n ruditapes_c15451 1.018 0.987 f-actin-capping protein subunit alpha /// 0016043 // cellular component organization 0.857 0.872 n n n ruditapes_c8294 -1.032 0.987 0.805 0.78 n n n ruditapes_c23316 -1.038 0.987 thyroid hormone receptor interactor 12 /// 0019941 // modification-dependent protein catabolic process /// 0016881 // acid-amino acid ligase activity /// 0046966 // thyroid hormone receptor binding /// 0005622 // intracellular /// 0006464 // protein modification process 0.621 0.599 n n n ruditapes_c26205 -1.038 0.987 0.619 0.596 n n n ruditapes_c21821 -1.038 0.987 0.613 0.591 n n n ruditapes_c19254 -1.038 0.987 dna-mediated transposase 0.585 0.564 n n n ruditapes_lrc33975 -1.038 0.987 transcription initiation factor tfiid subunit 10 "/// 0006355 // regulation of transcription, DNA-dependent /// 0048471 // perinuclear region of cytoplasm /// 0005515 // protein binding /// 0006368 // RNA elongation from RNA polymerase II promoter /// 0005669 // transcription factor TFIID complex /// 0006915 // apoptosis /// 0000082 // G1/S transition of mitotic cell cycle /// 0003743 // translation initiation factor activity /// 0006367 // transcription initiation from RNA polymerase II promoter /// 0003702 // RNA polymerase II transcription factor activity" 0.582 0.561 n n n ruditapes_lrc9360 -1.038 0.987 0.568 0.547 n n n ruditapes_c12260 -1.038 0.987 monocarboxylate transporter 0.565 0.545 n n n ruditapes_c6646 1.028 0.987 protein 0.465 0.478 n n n ruditapes_c29256 1.049 0.987 0.174 0.183 n n n ruditapes_c4984 1.049 0.987 0.166 0.174 n n n ruditapes_c7000 -1.112 0.987 0.061 0.055 n n n ruditapes_lrc33362 -1.112 0.987 atp binding 0.061 0.055 n n n ruditapes2_lrc7298 -1.112 0.987 0.06 0.054 n n n ruditapes_c26806 -1.112 0.987 0.06 0.054 n n n ruditapes_c30381 -1.112 0.987 0.06 0.054 n n n ruditapes_c6196 -1.112 0.987 pe-pgrs family protein 0.06 0.054 n n n ruditapes_lrc21447 -1.112 0.987 protein 0.06 0.054 n n n ruditapes2_c1901 -1.112 0.987 0.059 0.053 n n n ruditapes2_c4594 -1.112 0.987 methionine sulfoxide reductase b3 0.059 0.053 n n n ruditapes_c15516 -1.112 0.987 notch 2 0.059 0.053 n n n ruditapes_c29666 -1.112 0.987 ovulatory protein-2 precursor 0.059 0.053 n n n ruditapes_lrc33302 -1.112 0.987 methyltransferase type 11 0.058 0.053 n n n ruditapes_c32994 -1.112 0.987 0.058 0.052 n n n ruditapes_lrc37346 -1.112 0.987 von willebrand factor c domain containing 2 0.058 0.052 n n n ruditapes_c1856 -1.112 0.987 antimicrobial peptide hydramacin 0.057 0.052 n n n ruditapes2_lrc4111 -1.112 0.987 nucleoside diphosphate kinase /// 0005524 // ATP binding /// 0007424 // open tracheal system development /// 0006468 // protein amino acid phosphorylation /// 0006183 // GTP biosynthetic process /// 0006241 // CTP biosynthetic process /// 0005880 // nuclear microtubule /// 0004550 // nucleoside diphosphate kinase activity /// 0000287 // magnesium ion binding /// 0006228 // UTP biosynthetic process 0.057 0.051 n n n ruditapes_c29301 -1.112 0.987 0.057 0.051 n n n ruditapes_lrc36366 -1.112 0.987 protein 0.057 0.051 n n n ruditapes2_lrc3753 -1.112 0.987 0.055 0.049 n n n ruditapes_lrc36800 -1.112 0.987 malate dehydrogenase nad /// 0003824 // catalytic activity /// 0008152 // metabolic process 0.055 0.049 n n n ruditapes2_lrc6008 -1.112 0.987 0.054 0.049 n n n ruditapes_c7006 -1.112 0.987 0.054 0.049 n n n ruditapes2_lrc4299 -1.112 0.987 s-adenosylhomocysteine hydrolase /// 0004013 // adenosylhomocysteinase activity /// 0005488 // binding /// 0006730 // one-carbon metabolic process 0.053 0.048 n n n ruditapes_c20632 -1.112 0.987 0.053 0.048 n n n ruditapes_lrc35362 -1.112 0.987 abnormal wing discs /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process 0.053 0.048 n n n ruditapes_lrc36274 -1.112 0.987 serum amyloid a 0.053 0.047 n n n ruditapes_c818 -1.013 0.988 11.965 11.809 n n n ruditapes_c2412 1.002 0.988 26s protease regulatory subunit s10b /// 0005524 // ATP binding /// 0005634 // nucleus /// 0006508 // proteolysis /// 0017111 // nucleoside-triphosphatase activity /// 0030163 // protein catabolic process /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle /// 0004175 // endopeptidase activity 6.035 6.045 n n n ruditapes_c3679 1.002 0.988 4.982 4.994 n n n ruditapes_c3450 1.003 0.988 aldehyde dehydrogenase 1a1 /// 0005759 // mitochondrial matrix /// 0055114 // oxidation reduction /// 0005975 // carbohydrate metabolic process /// 0005634 // nucleus /// 0001758 // retinal dehydrogenase activity /// 0004029 // aldehyde dehydrogenase (NAD) activity 4.412 4.426 n n n ruditapes_c1851 -1.017 0.988 4.252 4.182 n n n ruditapes_c5145 1.012 0.988 1.404 1.421 n n n ruditapes_s38346 -1.026 0.988 1.24 1.209 n n n ruditapes_s36630 -1.026 0.988 eukaryotic translation initiation factor subunit h /// 0005488 // binding /// 0005737 // cytoplasm 1.18 1.15 n n n ruditapes_c28902 1.022 0.988 mannose c type 1-like 1 /// 0006810 // transport /// 0005634 // nucleus /// 0005488 // binding /// 0016020 // membrane /// 0005737 // cytoplasm /// 0009987 // cellular process 0.575 0.587 n n n ruditapes2_c4507 1.022 0.988 mitogen-activated protein-binding protein-interacting protein /// 0016020 // membrane /// 0005515 // protein binding /// 0000186 // activation of MAPKK activity /// 0005770 // late endosome 0.573 0.586 n n n ruditapes_c15467 -1.038 0.988 0.499 0.481 n n n ruditapes_c18032 -1.038 0.988 0.473 0.455 n n n ruditapes2_c2090 1.028 0.988 3-hydroxybutyrate type 1 "/// 0016616 // oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor /// 0044446 // intracellular organelle part /// 0044444 // cytoplasmic part /// 0044237 // cellular metabolic process /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane /// 0042445 // hormone metabolic process" 0.394 0.405 n n n ruditapes_c18353 1.028 0.988 sestrin 1 0.37 0.38 n n n ruditapes2_lrc3127 1.028 0.988 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0.359 0.369 n n n ruditapes_lrc32214 1.028 0.988 mitochondrial cytochrome c oxidase subunit 5a /// 0005811 // lipid particle /// 0045787 // positive regulation of cell cycle /// 0005743 // mitochondrial inner membrane 0.357 0.367 n n n ruditapes2_lrc3845 1.049 0.988 0.152 0.159 n n n ruditapes_lrc33888 -1.112 0.988 kallikrein plasma (fletcher factor) 1 /// 0044267 // cellular protein metabolic process /// 0005576 // extracellular region /// 0042730 // fibrinolysis /// 0008233 // peptidase activity 0.052 0.047 n n n ruditapes_c2740 -1.112 0.988 cu zn superoxide dismutase /// 0051239 // regulation of multicellular organismal process /// 0051087 // chaperone binding /// 0050665 // hydrogen peroxide biosynthetic process /// 0005507 // copper ion binding /// 0048731 // system development /// 0004784 // superoxide dismutase activity /// 0005739 // mitochondrion /// 0016043 // cellular component organization /// 0044238 // primary metabolic process /// 0005634 // nucleus /// 0046688 // response to copper ion /// 0006873 // cellular ion homeostasis /// 0006916 // anti-apoptosis /// 0000302 // response to reactive oxygen species /// 0007154 // cell communication /// 0031667 // response to nutrient levels /// 0043025 // cell soma /// 0043085 // positive regulation of catalytic activity /// 0022414 // reproductive process /// 0019430 // removal of superoxide radicals /// 0008015 // blood circulation /// 0050877 // neurological system process /// 0034960 // cellular biopolymer metabolic process 0.052 0.046 n n n ruditapes2_c2337 -1.112 0.988 0.051 0.046 n n n ruditapes_c31047 -1.112 0.988 0.05 0.045 n n n ruditapes_c31594 -1.112 0.988 baculoviral iap repeat-containing 4 /// 0042981 // regulation of apoptosis /// 0005488 // binding /// 0005622 // intracellular 0.05 0.045 n n n ruditapes2_c6 -1.112 0.988 blood-stage membrane protein ag-1 0.049 0.044 n n n ruditapes_c45 -1.112 0.988 0.049 0.044 n n n ruditapes2_c2190 -1.112 0.988 chitin synthase "/// 0048731 // system development /// 0016757 // transferase activity, transferring glycosyl groups" 0.047 0.042 n n n ruditapes_lrc32216 -1.112 0.988 0.046 0.042 n n n ruditapes_c2621 -1.112 0.988 0.046 0.041 n n n ruditapes2_c1357 -1.012 0.989 15.555 15.376 n n n ruditapes_c23585 -1.001 0.989 13.158 13.142 n n n ruditapes_c17840 -1.001 0.989 10.216 10.209 n n n ruditapes_c9136 1.002 0.989 4.983 4.99 n n n ruditapes_c27152 1.002 0.989 4.953 4.964 n n n ruditapes2_c1315 -1.017 0.989 3.58 3.52 n n n ruditapes_c18765 -1.018 0.989 3.042 2.988 n n n ruditapes_c13315 1.005 0.989 2.782 2.797 n n n ruditapes_c3742 1.006 0.989 2.321 2.334 n n n ruditapes_c18221 -1.021 0.989 2.073 2.031 n n n ruditapes_c14374 1.012 0.989 1.173 1.187 n n n ruditapes2_c1717 1.012 0.989 1.162 1.176 n n n ruditapes_c31846 1.012 0.989 1.128 1.141 n n n ruditapes_c17080 1.012 0.989 1.091 1.103 n n n ruditapes_c16495 -1.026 0.989 PREDICTED: similar to chaperonin [Strongylocentrotus purpuratus] 1.027 1.001 n n n ruditapes_c26591 -1.026 0.989 vacuolar protein sorting 8 homolog /// 0046872 // metal ion binding 0.99 0.964 n n n ruditapes_c10323 -1.032 0.989 cysteine dioxygenase 0.647 0.626 n n n ruditapes_c9912 -1.038 0.989 lsm domain containing 1 0.439 0.423 n n n ruditapes2_lrc5960 -1.038 0.989 0.419 0.404 n n n ruditapes_c16383 -1.038 0.989 0.391 0.377 n n n ruditapes_c13020 -1.112 0.989 0.037 0.034 n n n ruditapes2_c652 -1.112 0.989 0.037 0.033 n n n ruditapes_c14917 -1.011 0.99 20.939 20.72 n n n ruditapes2_c388 -1.011 0.99 vdg3 [Mytilus edulis] 16.572 16.387 n n n ruditapes_lrc36854 -1.002 0.99 15.54 15.506 n n n ruditapes_c15925 -1.013 0.99 8.364 8.256 n n n ruditapes_c11226 -1 0.99 7.25 7.25 n n n ruditapes_c21783 -1 0.99 6.378 6.378 n n n ruditapes_c21167 1.001 0.99 5.661 5.665 n n n ruditapes2_c44 1.002 0.99 tetraspanin isoform a 4.195 4.204 n n n ruditapes_c29210 1.003 0.99 3.792 3.801 n n n ruditapes_c12266 1.003 0.99 alpha-galactosidase alpha-n-acetylgalactosaminidase 3.357 3.368 n n n ruditapes2_c1210 1.005 0.99 proteasome ( macropain) beta 5 /// 0006511 // ubiquitin-dependent protein catabolic process /// 0005634 // nucleus /// 0005829 // cytosol /// 0005839 // proteasome core complex /// 0004298 // threonine-type endopeptidase activity 2.18 2.192 n n n ruditapes_c19446 1.006 0.99 isoform a 1.964 1.976 n n n ruditapes_c21109 1.006 0.99 1.822 1.834 n n n ruditapes_c14032 1.006 0.99 protein 1.624 1.634 n n n ruditapes_c9865 1.008 0.99 acetyl-coenzyme a synthetase "/// 0016208 // AMP binding /// 0003987 // acetate-CoA ligase activity /// 0019287 // isopentenyl diphosphate biosynthetic process, mevalonate pathway" 1.517 1.529 n n n ruditapes_c18030 -1.022 0.99 leukocyte receptor cluster member 9 1.393 1.363 n n n ruditapes2_c3702 1.012 0.99 nadh dehydrogenase 1 alpha 7 ( ) /// 0005739 // mitochondrion 0.947 0.958 n n n ruditapes_c4910 1.012 0.99 0.868 0.878 n n n ruditapes_c27669 1.012 0.99 0.867 0.877 n n n ruditapes_c29667 1.012 0.99 0.867 0.877 n n n ruditapes_c11422 -1.026 0.99 0.892 0.869 n n n ruditapes_c27895 -1.026 0.99 0.878 0.856 n n n ruditapes_c18467 -1.026 0.99 0.862 0.84 n n n ruditapes_c15646 -1.026 0.99 f-box and wd40 domain protein 7 0.81 0.789 n n n ruditapes_c1404 -1.038 0.99 PREDICTED: similar to GA21374-PA [Strongylocentrotus purpuratus] 0.375 0.362 n n n ruditapes_c17477 -1.038 0.99 amp dependent coa ligase /// 0003824 // catalytic activity 0.37 0.357 n n n ruditapes_c8562 -1.038 0.99 asialoglycoprotein receptor 2 0.339 0.327 n n n ruditapes_lrc23878 -1.038 0.99 0.335 0.323 n n n ruditapes_lrc29965 -1.038 0.99 novel protein vertebrate interferon-induced protein 44 0.32 0.308 n n n ruditapes2_c1011 -1.112 0.99 0.035 0.031 n n n ruditapes2_lrc4486 -1.003 0.991 tyb_aplca ame: full=thymosin beta ame: full=beta-thymosin 13.414 13.38 n n n ruditapes_c14741 -1.002 0.991 11.915 11.888 n n n ruditapes2_c1151 -1.011 0.991 11.497 11.367 n n n ruditapes_c15042 -1.013 0.991 6.691 6.605 n n n ruditapes_c25730 1 0.991 5.102 5.103 n n n ruditapes_c1639 -1.016 0.991 3.504 3.449 n n n ruditapes_c12577 -1.016 0.991 replication factor c (activator 1) 37kda "/// 0005524 // ATP binding /// 0006271 // DNA strand elongation during DNA replication /// 0006297 // nucleotide-excision repair, DNA gap filling /// 0005663 // DNA replication factor C complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0003689 // DNA clamp loader activity /// 0048015 // phosphoinositide-mediated signaling" 3.478 3.424 n n n ruditapes_c17227 -1.016 0.991 3.066 3.017 n n n ruditapes_c18601 -1.016 0.991 3.006 2.96 n n n ruditapes_c18768 1.003 0.991 nadh-ubiquinone oxidoreductase fe-s protein 2 "/// 0003954 // NADH dehydrogenase activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0051287 // NAD or NADH binding /// 0005747 // mitochondrial respiratory chain complex I /// 0009055 // electron carrier activity" 2.659 2.667 n n n ruditapes2_c866 -1.018 0.991 polcalcin jun 2.145 2.107 n n n ruditapes_c23301 -1.018 0.991 2.143 2.105 n n n ruditapes_lrc34730 -1.018 0.991 ribosomal protein s8 /// 0030529 // ribonucleoprotein complex 2.088 2.051 n n n ruditapes2_c1284 1.005 0.991 peroxisomal trans-2-enoyl- reductase /// 0006633 // fatty acid biosynthetic process /// 0016491 // oxidoreductase activity 2.028 2.037 n n n ruditapes_c20911 -1.019 0.991 1.773 1.739 n n n ruditapes2_c2385 1.006 0.991 1.57 1.58 n n n ruditapes_lrc24365 -1.022 0.991 1.309 1.281 n n n ruditapes_c7603 -1.022 0.991 translation initiation factor eif-2b subunit alpha beta delta-like protein /// 0042802 // identical protein binding /// 0044249 // cellular biosynthetic process 1.14 1.116 n n n ruditapes2_c2698 1.012 0.991 phospholipase eta 2 /// 0005886 // plasma membrane /// 0030384 // phosphoinositide metabolic process /// 0004629 // phospholipase C activity 0.803 0.813 n n n ruditapes_lrc13520 1.012 0.991 0.801 0.811 n n n ruditapes_c12071 1.012 0.991 rhamnospondin 1 /// 0009987 // cellular process 0.792 0.801 n n n ruditapes_c21207 1.012 0.991 0.736 0.744 n n n ruditapes2_c2586 1.012 0.991 0.699 0.708 n n n ruditapes_c13362 1.012 0.991 0.686 0.694 n n n ruditapes_c25201 -1.026 0.991 0.693 0.675 n n n ruditapes_c11068 -1.026 0.991 signal peptidase 12kda /// 0006508 // proteolysis /// 0030176 // integral to endoplasmic reticulum membrane /// 0005787 // signal peptidase complex /// 0006465 // signal peptide processing /// 0008233 // peptidase activity /// 0005792 // microsome 0.692 0.674 n n n ruditapes_lrc24875 -1.026 0.991 0.647 0.631 n n n ruditapes_c23028 -1.011 0.992 13.427 13.283 n n n ruditapes_lrc31207 -1.001 0.992 6.917 6.907 n n n ruditapes_c4235 -1.001 0.992 6.134 6.129 n n n ruditapes_c26714 -1.015 0.992 fstl4 protein 3.301 3.251 n n n ruditapes_c28420 1.003 0.992 2.297 2.305 n n n ruditapes2_c2175 1.005 0.992 1.539 1.547 n n n ruditapes_c27262 -1.022 0.992 1.022 1 n n n ruditapes_c25496 1.012 0.992 0.635 0.643 n n n ruditapes_c21326 1.012 0.992 0.578 0.585 n n n ruditapes_lrc33014 1.012 0.992 mitochondrial atp synthase coupling factor 6 0.567 0.574 n n n ruditapes_lrc21972 -1.026 0.992 0.568 0.554 n n n ruditapes2_lrc4219 1.012 0.992 ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0.542 0.548 n n n ruditapes2_c2855 -1.026 0.992 0.506 0.493 n n n ruditapes_c18582 -1.026 0.992 0.485 0.473 n n n ruditapes_c24458 -1.002 0.993 4.908 4.901 n n n ruditapes_c13449 -1.013 0.993 anopheles gambiae pest agap012902-pa 3.709 3.66 n n n ruditapes_c8336 -1.001 0.993 3.629 3.627 n n n ruditapes_c17101 1.002 0.993 2.18 2.184 n n n ruditapes_c6549 -1.017 0.993 1.497 1.472 n n n ruditapes2_c4636 1.005 0.993 lpa-prov partial 0.998 1.004 n n n ruditapes_c19144 -1.019 0.993 0.898 0.881 n n n ruditapes_c9191 -1.026 0.993 beta-lactamase 0.473 0.461 n n n ruditapes_c10304 -1.026 0.993 clathrin coat assembly protein /// 0016192 // vesicle-mediated transport /// 0006886 // intracellular protein transport /// 0005515 // protein binding /// 0048072 // compound eye pigmentation /// 0008565 // protein transporter activity /// 0006727 // ommochrome biosynthetic process /// 0030117 // membrane coat 0.471 0.458 n n n ruditapes_c12950 -1.026 0.993 0.471 0.458 n n n ruditapes_c22333 1.012 0.993 tousled-like kinase 2 /// 0005524 // ATP binding /// 0007242 // intracellular signaling cascade /// 0005634 // nucleus /// 0006468 // protein amino acid phosphorylation /// 0005515 // protein binding /// 0001672 // regulation of chromatin assembly or disassembly /// 0004674 // protein serine/threonine kinase activity 0.449 0.454 n n n ruditapes_lrc34299 1.012 0.993 60s ribosomal protein l10a /// 0006396 // RNA processing /// 0005840 // ribosome /// 0006412 // translation /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0.424 0.429 n n n ruditapes_c7932 1.012 0.993 0.416 0.421 n n n ruditapes_c27746 1.012 0.993 0.413 0.418 n n n ruditapes_c28203 -1.026 0.993 phospholipase b1 0.419 0.408 n n n ruditapes_c3440 -1.026 0.993 0.417 0.406 n n n ruditapes_s37398 1.012 0.993 ribosomal protein s5 /// 0015935 // small ribosomal subunit /// 0006412 // translation /// 0005829 // cytosol 0.387 0.392 n n n ruditapes_lrc13010 -1.026 0.993 0.38 0.371 n n n ruditapes_c16229 -1.003 0.994 7.706 7.683 n n n ruditapes_c16654 -1.011 0.994 7.375 7.296 n n n ruditapes_c26558 -1.002 0.994 4.398 4.39 n n n ruditapes_c26275 -1.001 0.994 3.31 3.307 n n n ruditapes_c2340 -1.001 0.994 3.154 3.151 n n n ruditapes_c20021 -1.013 0.994 3.041 3.002 n n n ruditapes2_c2631 -1.013 0.994 2.761 2.726 n n n ruditapes2_c938 -1.014 0.994 2.208 2.177 n n n ruditapes_c31529 -1.014 0.994 2.086 2.057 n n n ruditapes_c10043 -1.014 0.994 3-hydroxyacyl-coa dehyrogenase /// 0003824 // catalytic activity /// 0008152 // metabolic process 1.963 1.935 n n n ruditapes_c11151 -1.015 0.994 1.667 1.642 n n n ruditapes_c27044 -1.017 0.994 hypothetical protein BRAFLDRAFT_94321 [Branchiostoma floridae] 1.349 1.327 n n n ruditapes_c278 1.003 0.994 1.288 1.292 n n n ruditapes_c22916 1.005 0.994 collagen triple helix repeat protein 0.812 0.816 n n n ruditapes_c9380 -1.019 0.994 0.814 0.799 n n n ruditapes_c1008 1.012 0.994 0.369 0.374 n n n ruditapes_lrc22575 1.012 0.994 ribosomal protein s13 /// 0006414 // translational elongation /// 0005730 // nucleolus /// 0005515 // protein binding /// 0003729 // mRNA binding /// 0003735 // structural constituent of ribosome /// 0022627 // cytosolic small ribosomal subunit /// 0033119 // negative regulation of RNA splicing 0.359 0.363 n n n ruditapes_c21684 1.012 0.994 ser thr-like protein kinase lyk4 /// 0005730 // nucleolus /// 0005737 // cytoplasm /// 0004672 // protein kinase activity 0.357 0.361 n n n ruditapes_c24617 1.012 0.994 0.338 0.342 n n n ruditapes_c20267 1.012 0.994 0.337 0.341 n n n ruditapes_c13778 1.012 0.994 0.332 0.336 n n n ruditapes_lrc9718 1.012 0.994 0.33 0.334 n n n ruditapes2_c2714 1.012 0.994 0.306 0.309 n n n ruditapes_c26825 1.012 0.994 0.299 0.303 n n n ruditapes_lrc35701 -1.026 0.994 calponin homolog 0.308 0.3 n n n ruditapes_lrc10071 -1.006 0.995 actin /// 0005625 // soluble fraction /// 0005829 // cytosol /// 0030863 // cortical cytoskeleton 68.757 68.367 n n n ruditapes_c13457 -1.01 0.995 9.699 9.606 n n n ruditapes_c12920 -1.003 0.995 6.905 6.883 n n n ruditapes_c12045 -1.003 0.995 5.973 5.956 n n n ruditapes2_lrc4626 -1.011 0.995 acyl carrier mitochondrial precursor 4.086 4.042 n n n ruditapes_s32402 -1.002 0.995 2.912 2.906 n n n ruditapes_c7911 -1.001 0.995 2.343 2.341 n n n ruditapes_c22240 -1.014 0.995 1.693 1.669 n n n ruditapes_c27447 -1.015 0.995 hypothetical protein BRAFLDRAFT_124696 [Branchiostoma floridae] 1.327 1.307 n n n ruditapes_c11547 -1.015 0.995 1.211 1.193 n n n ruditapes_c28600 -1.015 0.995 integrin-linked kinase-associated serine threonine phosphatase 2c 1.039 1.024 n n n ruditapes_c8394 1.003 0.995 0.872 0.874 n n n ruditapes_c16918 1.003 0.995 0.671 0.673 n n n ruditapes_c29809 -1.019 0.995 complement component c3 0.5 0.491 n n n ruditapes_lrc34225 1.012 0.995 0.255 0.258 n n n ruditapes2_lrc2113 1.012 0.995 serum amyloid a /// 0005515 // protein binding /// 0005615 // extracellular space /// 0008203 // cholesterol metabolic process 0.241 0.244 n n n ruditapes_c9175 1.012 0.995 complement component q subcomponent-like 4 0.239 0.242 n n n ruditapes_c2586 1.012 0.995 n inhibitor 0.211 0.213 n n n ruditapes_lrc35880 -1.008 0.996 ribosomal protein l7a 65.22 64.721 n n n ruditapes2_c1240 -1.005 0.996 19.351 19.25 n n n ruditapes_c13479 -1.005 0.996 19.274 19.174 n n n ruditapes_c13583 -1.005 0.996 alpha isoform a /// 0007016 // cytoskeletal anchoring at plasma membrane /// 0032440 // 2-alkenal reductase activity /// 0055114 // oxidation reduction /// 0004725 // protein tyrosine phosphatase activity /// 0005925 // focal adhesion /// 0051017 // actin filament bundle formation /// 0051015 // actin filament binding /// 0031532 // actin cytoskeleton reorganization /// 0007629 // flight behavior /// 0005509 // calcium ion binding 13.955 13.889 n n n ruditapes2_c3532 -1.004 0.996 ae-like protein 5.553 5.531 n n n ruditapes_c4309 -1.002 0.996 2.874 2.868 n n n ruditapes_c10962 -1.011 0.996 2.645 2.617 n n n ruditapes2_c169 -1.011 0.996 2.544 2.516 n n n ruditapes_c25386 -1.011 0.996 2.484 2.457 n n n ruditapes_c2485 -1.012 0.996 1.915 1.892 n n n ruditapes_c12672 -1.001 0.996 1.444 1.443 n n n ruditapes_c12466 1.002 0.996 0.634 0.635 n n n ruditapes_c14162 1.003 0.996 0.609 0.611 n n n ruditapes_c33590 -1.019 0.996 AF339450_1hillarin [Hirudo medicinalis] 0.368 0.361 n n n ruditapes_c12099 1.012 0.996 0.168 0.17 n n n ruditapes2_c1727 -1.005 0.997 9.215 9.167 n n n ruditapes_c2631 -1.003 0.997 2.381 2.373 n n n ruditapes_c15690 -1.011 0.997 alcohol iron 1 /// 0015993 // molecular hydrogen transport /// 0055114 // oxidation reduction /// 0005739 // mitochondrion /// 0046872 // metal ion binding /// 0047988 // hydroxyacid-oxoacid transhydrogenase activity 2.386 2.361 n n n ruditapes_c24480 -1.011 0.997 1.625 1.608 n n n ruditapes_c12488 -1.002 0.997 1.611 1.607 n n n ruditapes_c12262 -1.011 0.997 1.615 1.598 n n n ruditapes_c28696 -1.011 0.997 1.506 1.49 n n n ruditapes_c20606 -1.001 0.997 0.854 0.854 n n n ruditapes_c18284 -1.001 0.997 0.733 0.732 n n n ruditapes_lrc8288 -1.001 0.997 0.616 0.616 n n n ruditapes_c25766 -1.001 0.997 0.568 0.567 n n n ruditapes_c19706 -1.008 0.998 13.162 13.062 n n n ruditapes2_c1839 -1.009 0.998 5.253 5.208 n n n ruditapes2_c3220 -1.005 0.998 mago-nashi proliferation-associated "/// 0005681 // spliceosomal complex /// 0007292 // female gamete generation /// 0005515 // protein binding /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0051028 // mRNA transport /// 0003723 // RNA binding /// 0000398 // nuclear mRNA splicing, via spliceosome" 5.071 5.045 n n n ruditapes_c26676 -1.004 0.998 2.739 2.728 n n n ruditapes2_c3469 -1.004 0.998 proteasome ( macropain) 26s 1 /// 0005524 // ATP binding /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0000502 // proteasome complex /// 0016887 // ATPase activity /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005829 // cytosol 2.572 2.561 n n n ruditapes_c19566 -1.004 0.998 protein /// 0003720 // telomerase activity /// 0008283 // cell proliferation /// 0005697 // telomerase holoenzyme complex /// 0005730 // nucleolus /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0007004 // telomere maintenance via telomerase /// 0001522 // pseudouridine synthesis /// 0009982 // pseudouridine synthase activity /// 0006364 // rRNA processing /// 0003723 // RNA binding 1.904 1.896 n n n ruditapes_c27526 -1.003 0.998 1.205 1.202 n n n ruditapes_c18268 -1.011 0.998 1.189 1.176 n n n ruditapes_c15483 -1.011 0.998 1.013 1.002 n n n ruditapes_c21229 -1.011 0.998 1.007 0.996 n n n ruditapes_lrc35408 -1.011 0.998 0.994 0.983 n n n ruditapes_c18653 -1.011 0.998 peptidylglycine-alpha-hydroxylating isoform a "/// 0046914 // transition metal ion binding /// 0051087 // chaperone binding /// 0001700 // embryonic development via the syncytial blastoderm /// 0043283 // biopolymer metabolic process /// 0030708 // germarium-derived female germ-line cyst encapsulation /// 0005730 // nucleolus /// 0016715 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen /// 0006518 // peptide metabolic process /// 0035186 // syncytial blastoderm mitotic cell cycle /// 0021954 // central nervous system neuron development /// 0006697 // ecdysone biosynthetic process /// 0005783 // endoplasmic reticulum /// 0035102 // PRC1 complex /// 0030713 // ovarian follicle cell stalk formation /// 0035302 // ecdysteroid 25-hydroxylase activity /// 0003682 // chromatin binding /// 0016458 // gene silencing /// 0035075 // response to ecdysone" 0.882 0.872 n n n ruditapes_c19940 -1.011 0.998 0.836 0.827 n n n ruditapes_c15213 -1.011 0.998 0.801 0.792 n n n ruditapes_c18727 -1.011 0.998 0.797 0.789 n n n ruditapes_c12469 -1.011 0.998 0.791 0.782 n n n ruditapes_c20250 -1.011 0.998 0.697 0.69 n n n ruditapes_c13162 -1.011 0.998 0.664 0.656 n n n ruditapes_c8751 -1.011 0.998 0.625 0.618 n n n ruditapes_c29942 -1.011 0.998 0.566 0.56 n n n ruditapes_c24447 -1.011 0.998 0.551 0.545 n n n ruditapes2_lrc6274 -1.001 0.998 0.464 0.464 n n n ruditapes_c27279 -1.011 0.998 0.46 0.455 n n n ruditapes_c3173 -1.006 0.999 myc homolog 22.994 22.85 n n n ruditapes_c27519 -1.006 0.999 8.096 8.048 n n n ruditapes_lrc8884 -1.008 0.999 4.345 4.311 n n n ruditapes_c16051 -1.008 0.999 3.468 3.44 n n n ruditapes_c24729 -1.008 0.999 3.014 2.991 n n n ruditapes_c9343 -1.008 0.999 2.151 2.135 n n n ruditapes_c12546 -1.006 0.999 proteasome ( macropain) 26s non- 13 /// 0031145 // anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process /// 0007127 // meiosis I /// 0051436 // negative regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0051437 // positive regulation of ubiquitin-protein ligase activity during mitotic cell cycle /// 0005829 // cytosol /// 0005838 // proteasome regulatory particle 2.094 2.081 n n n ruditapes_c11835 -1.008 0.999 1.857 1.842 n n n ruditapes_c12922 -1.006 0.999 1.57 1.561 n n n ruditapes_c16449 -1.006 0.999 1.375 1.367 n n n ruditapes_c15557 -1.004 0.999 1.13 1.126 n n n ruditapes_c5030 -1.004 0.999 1.112 1.107 n n n ruditapes_c18198 -1.004 0.999 1.096 1.091 n n n ruditapes2_c1188 -1.004 0.999 0.75 0.747 n n n ruditapes_c10338 -1.004 0.999 0.634 0.631 n n n ruditapes_c22440 -1.011 0.999 0.436 0.431 n n n ruditapes_c19978 -1.011 0.999 0.431 0.426 n n n ruditapes_c22773 -1.011 0.999 trafficking protein particle complex 4 /// 0016192 // vesicle-mediated transport /// 0045212 // neurotransmitter receptor biosynthetic process /// 0008021 // synaptic vesicle /// 0016020 // membrane /// 0005515 // protein binding /// 0030008 // TRAPP complex /// 0005795 // Golgi stack /// 0016358 // dendrite development 0.429 0.424 n n n ruditapes_c3008 -1.011 0.999 enhancer of rudimentary homolog /// 0007049 // cell cycle /// 0006221 // pyrimidine nucleotide biosynthetic process /// 0006207 // 'de novo' pyrimidine base biosynthetic process 0.428 0.423 n n n ruditapes_c4970 -1.011 0.999 0.419 0.414 n n n ruditapes2_c3649 -1.011 0.999 0.405 0.4 n n n ruditapes2_c3203 -1.011 0.999 protein /// 0005488 // binding 0.397 0.393 n n n ruditapes_c23233 -1.011 0.999 0.387 0.383 n n n ruditapes_lrc25492 -1.011 0.999 0.387 0.383 n n n ruditapes_c24084 -1.011 0.999 0.385 0.381 n n n ruditapes_lrc36902 -1.011 0.999 ferritin /// 0055114 // oxidation reduction /// 0004322 // ferroxidase activity /// 0006826 // iron ion transport /// 0006879 // cellular iron ion homeostasis /// 0005737 // cytoplasm /// 0008199 // ferric iron binding 0.339 0.335 n n n ruditapes_c6797 -1.011 0.999 tetraspanin 3 0.334 0.331 n n n ruditapes_c30552 -1.011 0.999 0.327 0.323 n n n ruditapes2_c6048 -1.011 0.999 0.321 0.317 n n n ruditapes_lrc35213 -1.011 0.999 calcium binding protein 2 0.319 0.315 n n n ruditapes2_lrc5836 -1.011 0.999 lethal 06225 /// 0005811 // lipid particle /// 0016887 // ATPase activity /// 0006811 // ion transport /// 0005515 // protein binding 0.301 0.298 n n n ruditapes_c31477 -1.011 0.999 0.264 0.261 n n n ruditapes_c31249 -1.011 0.999 elongation factor tu gtp binding domain containing 1 isoform 1 0.253 0.25 n n n ruditapes_c8195 -1.011 0.999 protein 0.175 0.173 n n n ruditapes_c21358 -1.007 1 nardilysin (n-arginine dibasic convertase) /// 0051044 // positive regulation of membrane protein ectodomain proteolysis /// 0005515 // protein binding /// 0008233 // peptidase activity /// 0044464 // cell part /// 0052548 // regulation of endopeptidase activity 4.481 4.452 n n n ruditapes_c14291 -1.007 1 2.471 2.454 n n n ruditapes2_c289 -1.007 1 2.08 2.065 n n n ruditapes_c16821 -1.007 1 1.906 1.892 n n n ruditapes_c7440 -1.006 1 adaptor-related protein complex alpha 2 subunit /// 0016192 // vesicle-mediated transport /// 0030131 // clathrin adaptor complex /// 0006886 // intracellular protein transport /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0050690 // regulation of defense response to virus by virus /// 0030141 // secretory granule /// 0005829 // cytosol /// 0008565 // protein transporter activity 0.977 0.971 n n n ruditapes2_c1002 1 1 0 0 n n n ruditapes2_c1003 1 1 0 0 n n n ruditapes2_c1020 1 1 0 0 n n n ruditapes2_c1045 1 1 0 0 n n n ruditapes2_c1054 1 1 0 0 n n n ruditapes2_c111 1 1 protein 0 0 n n n ruditapes2_c1111 1 1 0 0 n n n ruditapes2_c1126 1 1 c-type lectin 0 0 n n n ruditapes2_c1148 1 1 0 0 n n n ruditapes2_c1158 1 1 0 0 n n n ruditapes2_c1186 1 1 0 0 n n n ruditapes2_c1207 1 1 0 0 n n n ruditapes2_c1208 1 1 0 0 n n n ruditapes2_c125 1 1 complement component q subcomponent-like 4 /// 0005488 // binding 0 0 n n n ruditapes2_c1267 1 1 0 0 n n n ruditapes2_c1305 1 1 serrate protein 0 0 n n n ruditapes2_c135 1 1 0 0 n n n ruditapes2_c1379 1 1 0 0 n n n ruditapes2_c1397 1 1 0 0 n n n ruditapes2_c1403 1 1 0 0 n n n ruditapes2_c1420 1 1 0 0 n n n ruditapes2_c144 1 1 0 0 n n n ruditapes2_c1501 1 1 0 0 n n n ruditapes2_c1525 1 1 tetraspanin 3 0 0 n n n ruditapes2_c1623 1 1 0 0 n n n ruditapes2_c165 1 1 protein 0 0 n n n ruditapes2_c1653 1 1 0 0 n n n ruditapes2_c1666 1 1 0 0 n n n ruditapes2_c1682 1 1 0 0 n n n ruditapes2_c1690 1 1 0 0 n n n ruditapes2_c1722 1 1 0 0 n n n ruditapes2_c1724 1 1 0 0 n n n ruditapes2_c1733 1 1 caveolin 3 /// 0030315 // T-tubule /// 0019905 // syntaxin binding /// 0030299 // intestinal cholesterol absorption /// 0010332 // response to gamma radiation /// 0031410 // cytoplasmic vesicle /// 0005811 // lipid particle /// 0045768 // positive regulation of anti-apoptosis /// 0005901 // caveola /// 0019900 // kinase binding /// 0005925 // focal adhesion /// 0005739 // mitochondrion /// 0042493 // response to drug /// 0007584 // response to nutrient /// 0009967 // positive regulation of signal transduction /// 0042802 // identical protein binding /// 0051384 // response to glucocorticoid stimulus /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0000165 // MAPKKK cascade /// 0006469 // negative regulation of protein kinase activity /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0007520 // myoblast fusion /// 0032947 // protein complex scaffold /// 0050998 // nitric-oxide synthase binding /// 0016021 // integral to membrane /// 0033344 // cholesterol efflux /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0005829 // cytosol /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0001937 // negative regulation of endothelial cell proliferation /// 0007204 // elevation of cytosolic calcium ion concentration /// 0009612 // response to mechanical stimulus /// 0042391 // regulation of membrane potential /// 0010741 // negative regulation of protein kinase cascade /// 0031594 // neuromuscular junction /// 0009925 // basal plasma membrane /// 0045807 // positive regulation of endocytosis /// 0048884 // neuromast development 0 0 n n n ruditapes2_c1742 1 1 0 0 n n n ruditapes2_c175 1 1 cd209f protein /// 0005537 // mannose binding 0 0 n n n ruditapes2_c1750 1 1 lysozyme 0 0 n n n ruditapes2_c1757 1 1 0 0 n n n ruditapes2_c1793 1 1 0 0 n n n ruditapes2_c1815 1 1 0 0 n n n ruditapes2_c1825 1 1 0 0 n n n ruditapes2_c1850 1 1 0 0 n n n ruditapes2_c1867 1 1 0 0 n n n ruditapes2_c1878 1 1 sialic acid binding lectin 0 0 n n n ruditapes2_c1896 1 1 0 0 n n n ruditapes2_c1933 1 1 calmodulin 0 0 n n n ruditapes2_c1946 1 1 0 0 n n n ruditapes2_c1950 1 1 si:rp71- protein 0 0 n n n ruditapes2_c1963 1 1 l-asparaginase /// 0016787 // hydrolase activity 0 0 n n n ruditapes2_c1967 1 1 0 0 n n n ruditapes2_c1979 1 1 0 0 n n n ruditapes2_c1990 1 1 0 0 n n n ruditapes2_c1993 1 1 0 0 n n n ruditapes2_c2009 1 1 0 0 n n n ruditapes2_c201 1 1 0 0 n n n ruditapes2_c2018 1 1 0 0 n n n ruditapes2_c2046 1 1 0 0 n n n ruditapes2_c2052 1 1 0 0 n n n ruditapes2_c2057 1 1 0 0 n n n ruditapes2_c2080 1 1 asialoglycoprotein receptor 0 0 n n n ruditapes2_c2093 1 1 0 0 n n n ruditapes2_c2098 1 1 0 0 n n n ruditapes2_c2137 1 1 astacin-like squid metalloprotease type i 0 0 n n n ruditapes2_c2145 1 1 0 0 n n n ruditapes2_c2150 1 1 0 0 n n n ruditapes2_c2181 1 1 0 0 n n n ruditapes2_c2185 1 1 0 0 n n n ruditapes2_c2220 1 1 0 0 n n n ruditapes2_c2233 1 1 0 0 n n n ruditapes2_c2260 1 1 0 0 n n n ruditapes2_c2273 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes2_c2283 1 1 0 0 n n n ruditapes2_c2294 1 1 0 0 n n n ruditapes2_c2335 1 1 0 0 n n n ruditapes2_c234 1 1 0 0 n n n ruditapes2_c2353 1 1 0 0 n n n ruditapes2_c2360 1 1 0 0 n n n ruditapes2_c2366 1 1 0 0 n n n ruditapes2_c238 1 1 neurm_aplca ame: full=neuromacin-like protein flags: precursor 0 0 n n n ruditapes2_c2403 1 1 0 0 n n n ruditapes2_c2406 1 1 0 0 n n n ruditapes2_c2409 1 1 0 0 n n n ruditapes2_c2429 1 1 0 0 n n n ruditapes2_c2432 1 1 0 0 n n n ruditapes2_c2437 1 1 0 0 n n n ruditapes2_c2441 1 1 0 0 n n n ruditapes2_c2477 1 1 0 0 n n n ruditapes2_c2487 1 1 0 0 n n n ruditapes2_c2504 1 1 actp2_cymec ame: full=echotoxin-2 short=echt 2 flags: precursor 0 0 n n n ruditapes2_c2508 1 1 placenta-specific 8 0 0 n n n ruditapes2_c2536 1 1 0 0 n n n ruditapes2_c2537 1 1 0 0 n n n ruditapes2_c2547 1 1 pulmonary surfactant-associated protein d precursor /// 0043129 // surfactant homeostasis /// 0005576 // extracellular region /// 0048246 // macrophage chemotaxis /// 0005529 // sugar binding /// 0008367 // bacterial binding /// 0050766 // positive regulation of phagocytosis /// 0005764 // lysosome /// 0048286 // lung alveolus development /// 0006800 // oxygen and reactive oxygen species metabolic process /// 0042130 // negative regulation of T cell proliferation /// 0006898 // receptor-mediated endocytosis /// 0045087 // innate immune response /// 0030139 // endocytic vesicle /// 0045085 // negative regulation of interleukin-2 biosynthetic process 0 0 n n n ruditapes2_c2555 1 1 0 0 n n n ruditapes2_c256 1 1 ovary-specific c1q-like factor 0 0 n n n ruditapes2_c2570 1 1 0 0 n n n ruditapes2_c2603 1 1 0 0 n n n ruditapes2_c2621 1 1 0 0 n n n ruditapes2_c2629 1 1 0 0 n n n ruditapes2_c2645 1 1 cathepsin l 0 0 n n n ruditapes2_c2673 1 1 0 0 n n n ruditapes2_c2678 1 1 0 0 n n n ruditapes2_c2743 1 1 0 0 n n n ruditapes2_c2770 1 1 0 0 n n n ruditapes2_c2778 1 1 0 0 n n n ruditapes2_c279 1 1 hypothetical protein BRAFLDRAFT_74515 [Branchiostoma floridae] 0 0 n n n ruditapes2_c2794 1 1 0 0 n n n ruditapes2_c2848 1 1 0 0 n n n ruditapes2_c2852 1 1 0 0 n n n ruditapes2_c2876 1 1 0 0 n n n ruditapes2_c2879 1 1 0 0 n n n ruditapes2_c2889 1 1 0 0 n n n ruditapes2_c2895 1 1 isoform b 0 0 n n n ruditapes2_c2906 1 1 ficolin 2 /// 0005488 // binding /// 0044424 // intracellular part 0 0 n n n ruditapes2_c2911 1 1 pol-like protein 0 0 n n n ruditapes2_c2917 1 1 0 0 n n n ruditapes2_c2919 1 1 0 0 n n n ruditapes2_c2937 1 1 0 0 n n n ruditapes2_c2942 1 1 0 0 n n n ruditapes2_c296 1 1 0 0 n n n ruditapes2_c2961 1 1 0 0 n n n ruditapes2_c2976 1 1 0 0 n n n ruditapes2_c3014 1 1 0 0 n n n ruditapes2_c3018 1 1 asparaginyl-trna synthetase /// 0016874 // ligase activity 0 0 n n n ruditapes2_c3041 1 1 0 0 n n n ruditapes2_c3090 1 1 c-type lectin /// 0005488 // binding 0 0 n n n ruditapes2_c3102 1 1 suppression of tumorigenicity 14 (colon carcinoma) b /// 0016787 // hydrolase activity 0 0 n n n ruditapes2_c313 1 1 hypothetical protein BRAFLDRAFT_74063 [Branchiostoma floridae] 0 0 n n n ruditapes2_c3167 1 1 zygote arrest 1 0 0 n n n ruditapes2_c3178 1 1 0 0 n n n ruditapes2_c3202 1 1 0 0 n n n ruditapes2_c323 1 1 type alpha 1 0 0 n n n ruditapes2_c3245 1 1 0 0 n n n ruditapes2_c3260 1 1 0 0 n n n ruditapes2_c3284 1 1 asialoglycoprotein receptor 2 /// 0065007 // biological regulation /// 0005488 // binding /// 0009987 // cellular process 0 0 n n n ruditapes2_c3300 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes2_c333 1 1 serine protease inhibitor-1l 0 0 n n n ruditapes2_c3338 1 1 0 0 n n n ruditapes2_c3349 1 1 0 0 n n n ruditapes2_c336 1 1 0 0 n n n ruditapes2_c337 1 1 0 0 n n n ruditapes2_c3373 1 1 protein /// 0005488 // binding 0 0 n n n ruditapes2_c3384 1 1 putative pheromone [Aplysia californica] 0 0 n n n ruditapes2_c34 1 1 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0003824 // catalytic activity 0 0 n n n ruditapes2_c3419 1 1 asialoglycoprotein receptor 1 0 0 n n n ruditapes2_c3444 1 1 mantle gene 6 0 0 n n n ruditapes2_c3475 1 1 0 0 n n n ruditapes2_c3495 1 1 cathepsin l /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0 0 n n n ruditapes2_c3527 1 1 c-type lectin 0 0 n n n ruditapes2_c354 1 1 0 0 n n n ruditapes2_c3551 1 1 0 0 n n n ruditapes2_c3581 1 1 cg32512 cg32512-pa 0 0 n n n ruditapes2_c3600 1 1 0 0 n n n ruditapes2_c3602 1 1 AGAP002737-PA [Anopheles gambiae str. PEST] 0 0 n n n ruditapes2_c3613 1 1 0 0 n n n ruditapes2_c3629 1 1 protein 0 0 n n n ruditapes2_c3653 1 1 protein 0 0 n n n ruditapes2_c366 1 1 0 0 n n n ruditapes2_c3688 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes2_c37 1 1 0 0 n n n ruditapes2_c3708 1 1 0 0 n n n ruditapes2_c3744 1 1 galactoside- soluble isoform cra_a 0 0 n n n ruditapes2_c3777 1 1 0 0 n n n ruditapes2_c3856 1 1 0 0 n n n ruditapes2_c3857 1 1 0 0 n n n ruditapes2_c389 1 1 0 0 n n n ruditapes2_c3890 1 1 0 0 n n n ruditapes2_c3898 1 1 beta- precursor 0 0 n n n ruditapes2_c3926 1 1 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation 0 0 n n n ruditapes2_c3977 1 1 0 0 n n n ruditapes2_c3997 1 1 short-chain dehydrogenase reductase sdr 0 0 n n n ruditapes2_c4025 1 1 novel protein human megf11 protein 0 0 n n n ruditapes2_c405 1 1 0 0 n n n ruditapes2_c4066 1 1 0 0 n n n ruditapes2_c4080 1 1 0 0 n n n ruditapes2_c42 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes2_c4208 1 1 yd repeat protein 0 0 n n n ruditapes2_c4277 1 1 0 0 n n n ruditapes2_c4318 1 1 methyltransferase type 11 0 0 n n n ruditapes2_c441 1 1 mannose c type 1-like 1 0 0 n n n ruditapes2_c4418 1 1 0 0 n n n ruditapes2_c4502 1 1 0 0 n n n ruditapes2_c451 1 1 0 0 n n n ruditapes2_c4541 1 1 cathepsin l precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0 0 n n n ruditapes2_c457 1 1 mannose c type 2 /// 0005488 // binding 0 0 n n n ruditapes2_c4581 1 1 histidine triad nucleotide binding protein 1 /// 0005634 // nucleus /// 0003824 // catalytic activity 0 0 n n n ruditapes2_c460 1 1 0 0 n n n ruditapes2_c4600 1 1 0 0 n n n ruditapes2_c465 1 1 0 0 n n n ruditapes2_c4682 1 1 0 0 n n n ruditapes2_c486 1 1 0 0 n n n ruditapes2_c494 1 1 0 0 n n n ruditapes2_c496 1 1 0 0 n n n ruditapes2_c5077 1 1 tyrosine kinase partial 0 0 n n n ruditapes2_c508 1 1 period clock protein 0 0 n n n ruditapes2_c5180 1 1 0 0 n n n ruditapes2_c519 1 1 0 0 n n n ruditapes2_c5203 1 1 protein 0 0 n n n ruditapes2_c5319 1 1 0 0 n n n ruditapes2_c5325 1 1 0 0 n n n ruditapes2_c5372 1 1 0 0 n n n ruditapes2_c5503 1 1 0 0 n n n ruditapes2_c5513 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes2_c560 1 1 0 0 n n n ruditapes2_c566 1 1 0 0 n n n ruditapes2_c5832 1 1 0 0 n n n ruditapes2_c5924 1 1 0 0 n n n ruditapes2_c6055 1 1 0 0 n n n ruditapes2_c6070 1 1 0 0 n n n ruditapes2_c610 1 1 serine proteinase /// 0004866 // endopeptidase inhibitor activity 0 0 n n n ruditapes2_c612 1 1 0 0 n n n ruditapes2_c6142 1 1 0 0 n n n ruditapes2_c6214 1 1 0 0 n n n ruditapes2_c6217 1 1 0 0 n n n ruditapes2_c6309 1 1 0 0 n n n ruditapes2_c633 1 1 0 0 n n n ruditapes2_c640 1 1 macrophage receptor with collagenous structure 0 0 n n n ruditapes2_c6452 1 1 hypothetical protein [Mercenaria mercenaria] 0 0 n n n ruditapes2_c6476 1 1 pr-5-like protein /// 0044464 // cell part 0 0 n n n ruditapes2_c6546 1 1 0 0 n n n ruditapes2_c656 1 1 protein kinase c-binding protein nell1 0 0 n n n ruditapes2_c661 1 1 b chain streptavidin-2-iminobiotin ph space group i222 0 0 n n n ruditapes2_c668 1 1 0 0 n n n ruditapes2_c670 1 1 0 0 n n n ruditapes2_c6727 1 1 c-type lectin superfamily member g 0 0 n n n ruditapes2_c682 1 1 0 0 n n n ruditapes2_c6823 1 1 hypothetical protein BRAFLDRAFT_84061 [Branchiostoma floridae] 0 0 n n n ruditapes2_c7013 1 1 0 0 n n n ruditapes2_c707 1 1 cathepsin l 0 0 n n n ruditapes2_c715 1 1 0 0 n n n ruditapes2_c719 1 1 0 0 n n n ruditapes2_c723 1 1 0 0 n n n ruditapes2_c7337 1 1 metal binding protein 0 0 n n n ruditapes2_c738 1 1 0 0 n n n ruditapes2_c741 1 1 centriole proteome protein 0 0 n n n ruditapes2_c787 1 1 sialic acid-binding lectin 0 0 n n n ruditapes2_c796 1 1 0 0 n n n ruditapes2_c809 1 1 zygote arrest 1 0 0 n n n ruditapes2_c815 1 1 0 0 n n n ruditapes2_c818 1 1 0 0 n n n ruditapes2_c823 1 1 0 0 n n n ruditapes2_c882 1 1 0 0 n n n ruditapes2_c893 1 1 hemagglutinin amebocyte aggregation factor precursor 0 0 n n n ruditapes2_c952 1 1 0 0 n n n ruditapes2_c971 1 1 0 0 n n n ruditapes2_c978 1 1 0 0 n n n ruditapes2_lrc1546 1 1 0 0 n n n ruditapes2_lrc1551 1 1 mitochondrial atp synthase lipid binding protein precursor 0 0 n n n ruditapes2_lrc1597 1 1 0 0 n n n ruditapes2_lrc1603 1 1 prophage dlp12 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc1644 1 1 0 0 n n n ruditapes2_lrc1647 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc1868 1 1 0 0 n n n ruditapes2_lrc1929 1 1 0 0 n n n ruditapes2_lrc1987 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc2378 1 1 0 0 n n n ruditapes2_lrc2654 1 1 0 0 n n n ruditapes2_lrc2659 1 1 0 0 n n n ruditapes2_lrc2838 1 1 0 0 n n n ruditapes2_lrc2981 1 1 0 0 n n n ruditapes2_lrc3013 1 1 0 0 n n n ruditapes2_lrc3075 1 1 0 0 n n n ruditapes2_lrc3110 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes2_lrc3158 1 1 0 0 n n n ruditapes2_lrc3162 1 1 protein /// 0005488 // binding 0 0 n n n ruditapes2_lrc3224 1 1 mantle gene 6 0 0 n n n ruditapes2_lrc3274 1 1 antimicrobial peptide hydramacin 0 0 n n n ruditapes2_lrc3312 1 1 complement component q subcomponent-like 4 /// 0005488 // binding 0 0 n n n ruditapes2_lrc3313 1 1 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0 0 n n n ruditapes2_lrc3352 1 1 0 0 n n n ruditapes2_lrc3377 1 1 0 0 n n n ruditapes2_lrc3405 1 1 0 0 n n n ruditapes2_lrc3420 1 1 prophage dlp12 integrase /// 0008979 // prophage integrase activity /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc3425 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes2_lrc3460 1 1 0 0 n n n ruditapes2_lrc3484 1 1 neurm_aplca ame: full=neuromacin-like protein flags: precursor 0 0 n n n ruditapes2_lrc3498 1 1 mantle gene 6 0 0 n n n ruditapes2_lrc3520 1 1 0 0 n n n ruditapes2_lrc3556 1 1 bdef_tactr ame: full=big defensin flags: precursor 0 0 n n n ruditapes2_lrc3590 1 1 mantle gene 6 0 0 n n n ruditapes2_lrc3657 1 1 caveolin 2 /// 0016020 // membrane /// 0050789 // regulation of biological process /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc3668 1 1 ovary-specific c1q-like factor 0 0 n n n ruditapes2_lrc3711 1 1 0 0 n n n ruditapes2_lrc3720 1 1 0 0 n n n ruditapes2_lrc3775 1 1 0 0 n n n ruditapes2_lrc3779 1 1 integrase /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc3793 1 1 bdef_tactr ame: full=big defensin flags: precursor /// 0050896 // response to stimulus 0 0 n n n ruditapes2_lrc3819 1 1 0 0 n n n ruditapes2_lrc3830 1 1 0 0 n n n ruditapes2_lrc3849 1 1 0 0 n n n ruditapes2_lrc3851 1 1 0 0 n n n ruditapes2_lrc3867 1 1 dlp12 prophage integrase 0 0 n n n ruditapes2_lrc3905 1 1 unknown protein 7 [Haliotis diversicolor] 0 0 n n n ruditapes2_lrc3907 1 1 sialic acid-binding lectin 0 0 n n n ruditapes2_lrc3933 1 1 0 0 n n n ruditapes2_lrc3953 1 1 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes2_lrc3956 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc3959 1 1 ly-6 neurotoxin-related protein 0 0 n n n ruditapes2_lrc3964 1 1 protein 0 0 n n n ruditapes2_lrc4003 1 1 0 0 n n n ruditapes2_lrc4006 1 1 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc4016 1 1 0 0 n n n ruditapes2_lrc4017 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes2_lrc4083 1 1 0 0 n n n ruditapes2_lrc4088 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes2_lrc4128 1 1 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc4131 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc4134 1 1 site-specific phage integrase family /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc4143 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc4146 1 1 prophage dlp12 integrase /// 0003824 // catalytic activity /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc4147 1 1 integrase /// 0006259 // DNA metabolic process 0 0 n n n ruditapes2_lrc4152 1 1 prophage dlp12 integrase /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc4156 1 1 0 0 n n n ruditapes2_lrc4167 1 1 0 0 n n n ruditapes2_lrc4171 1 1 0 0 n n n ruditapes2_lrc4175 1 1 0 0 n n n ruditapes2_lrc4178 1 1 integrase 0 0 n n n ruditapes2_lrc4192 1 1 0 0 n n n ruditapes2_lrc4199 1 1 prophage dlp12 integrase /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc4203 1 1 0 0 n n n ruditapes2_lrc4215 1 1 integrase /// 0006259 // DNA metabolic process /// 0008979 // prophage integrase activity 0 0 n n n ruditapes2_lrc4223 1 1 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0032196 // transposition /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes2_lrc4244 1 1 60s ribosomal protein l21 /// 0005840 // ribosome /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0 n n n ruditapes2_lrc4248 1 1 0 0 n n n ruditapes2_lrc4249 1 1 0 0 n n n ruditapes2_lrc4280 1 1 integrase 0 0 n n n ruditapes2_lrc4283 1 1 prophage dlp12 integrase 0 0 n n n ruditapes2_lrc4321 1 1 0 0 n n n ruditapes2_lrc4360 1 1 chymotrypsinogen 2 /// 0016787 // hydrolase activity 0 0 n n n ruditapes2_lrc4366 1 1 integrase /// 0008979 // prophage integrase activity /// 0009987 // cellular process 0 0 n n n ruditapes2_lrc4374 1 1 0 0 n n n ruditapes2_lrc4397 1 1 0 0 n n n ruditapes2_lrc4417 1 1 keratin associated protein 19-3 0 0 n n n ruditapes2_lrc4443 1 1 0 0 n n n ruditapes2_lrc4450 1 1 0 0 n n n ruditapes2_lrc4548 1 1 0 0 n n n ruditapes2_lrc4604 1 1 dicarbonyl l-xylulose reductase "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005996 // monosaccharide metabolic process /// 0044464 // cell part" 0 0 n n n ruditapes2_lrc4611 1 1 0 0 n n n ruditapes2_lrc4615 1 1 0 0 n n n ruditapes2_lrc4637 1 1 0 0 n n n ruditapes2_lrc4684 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes2_lrc4708 1 1 mantle gene 6 0 0 n n n ruditapes2_lrc4769 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes2_lrc4795 1 1 ca2+ sensor 0 0 n n n ruditapes2_lrc4817 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes2_lrc4884 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes2_lrc4888 1 1 fad binding domain containing protein 0 0 n n n ruditapes2_lrc4895 1 1 0 0 n n n ruditapes2_lrc4903 1 1 0 0 n n n ruditapes2_lrc4907 1 1 0 0 n n n ruditapes2_lrc4936 1 1 0 0 n n n ruditapes2_lrc4941 1 1 trypsin /// 0016787 // hydrolase activity 0 0 n n n ruditapes2_lrc4946 1 1 0 0 n n n ruditapes2_lrc4962 1 1 calcium binding protein 1 0 0 n n n ruditapes2_lrc4965 1 1 0 0 n n n ruditapes2_lrc4966 1 1 0 0 n n n ruditapes2_lrc4968 1 1 0 0 n n n ruditapes2_lrc4999 1 1 0 0 n n n ruditapes2_lrc5047 1 1 0 0 n n n ruditapes2_lrc5078 1 1 0 0 n n n ruditapes2_lrc5085 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes2_lrc5118 1 1 0 0 n n n ruditapes2_lrc5129 1 1 0 0 n n n ruditapes2_lrc5159 1 1 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0 0 n n n ruditapes2_lrc5164 1 1 0 0 n n n ruditapes2_lrc5174 1 1 0 0 n n n ruditapes2_lrc5213 1 1 ca2+ sensor 0 0 n n n ruditapes2_lrc5244 1 1 interferon-alpha beta receptor alpha chain 0 0 n n n ruditapes2_lrc5245 1 1 0 0 n n n ruditapes2_lrc5262 1 1 0 0 n n n ruditapes2_lrc5266 1 1 0 0 n n n ruditapes2_lrc5293 1 1 0 0 n n n ruditapes2_lrc5322 1 1 0 0 n n n ruditapes2_lrc5337 1 1 0 0 n n n ruditapes2_lrc5357 1 1 0 0 n n n ruditapes2_lrc5383 1 1 0 0 n n n ruditapes2_lrc5401 1 1 0 0 n n n ruditapes2_lrc5405 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes2_lrc5411 1 1 ca2+ sensor 0 0 n n n ruditapes2_lrc5423 1 1 0 0 n n n ruditapes2_lrc5456 1 1 0 0 n n n ruditapes2_lrc5460 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes2_lrc5462 1 1 0 0 n n n ruditapes2_lrc5463 1 1 antimicrobial peptide hydramacin 0 0 n n n ruditapes2_lrc5535 1 1 0 0 n n n ruditapes2_lrc5604 1 1 0 0 n n n ruditapes2_lrc5741 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes2_lrc5804 1 1 0 0 n n n ruditapes2_lrc5866 1 1 0 0 n n n ruditapes2_lrc5899 1 1 0 0 n n n ruditapes2_lrc5918 1 1 0 0 n n n ruditapes2_lrc5977 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes2_lrc6041 1 1 histidine kinase 0 0 n n n ruditapes2_lrc6073 1 1 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes2_lrc6151 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes2_lrc6160 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes2_lrc6297 1 1 0 0 n n n ruditapes2_lrc6303 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes2_lrc6305 1 1 0 0 n n n ruditapes2_lrc6315 1 1 0 0 n n n ruditapes2_lrc6423 1 1 0 0 n n n ruditapes2_lrc6437 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes2_lrc6443 1 1 0 0 n n n ruditapes2_lrc6525 1 1 0 0 n n n ruditapes2_lrc6542 1 1 bdef_tactr ame: full=big defensin flags: precursor 0 0 n n n ruditapes2_lrc6557 1 1 cd209 antigen-like protein a 0 0 n n n ruditapes2_lrc6622 1 1 0 0 n n n ruditapes2_lrc6653 1 1 0 0 n n n ruditapes2_lrc6701 1 1 0 0 n n n ruditapes2_lrc6719 1 1 0 0 n n n ruditapes2_lrc6756 1 1 0 0 n n n ruditapes2_lrc6761 1 1 serine proteinase 0 0 n n n ruditapes2_lrc6819 1 1 0 0 n n n ruditapes2_lrc6848 1 1 0 0 n n n ruditapes2_lrc6897 1 1 0 0 n n n ruditapes2_lrc6949 1 1 0 0 n n n ruditapes2_lrc7105 1 1 0 0 n n n ruditapes2_lrc7120 1 1 0 0 n n n ruditapes2_lrc7157 1 1 0 0 n n n ruditapes2_lrc7203 1 1 0 0 n n n ruditapes2_lrc7229 1 1 cysteine-rich protein 1 0 0 n n n ruditapes2_lrc7295 1 1 DEC-3 [Lymnaea stagnalis] 0 0 n n n ruditapes2_lrc7378 1 1 0 0 n n n ruditapes2_lrc7381 1 1 0 0 n n n ruditapes2_lrc7416 1 1 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0 n n n ruditapes2_lrc7484 1 1 0 0 n n n ruditapes2_lrc7533 1 1 0 0 n n n ruditapes2_lrc7587 1 1 0 0 n n n ruditapes2_lrc7652 1 1 0 0 n n n ruditapes2_lrc7681 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes2_lrc7721 1 1 0 0 n n n ruditapes2_lrc7748 1 1 hypothetical protein [Mercenaria mercenaria] 0 0 n n n ruditapes_c100 1 1 0 0 n n n ruditapes_c10005 1 1 0 0 n n n ruditapes_c10029 1 1 0 0 n n n ruditapes_c1005 1 1 0 0 n n n ruditapes_c10050 1 1 0 0 n n n ruditapes_c10064 1 1 0 0 n n n ruditapes_c10074 1 1 0 0 n n n ruditapes_c10082 1 1 0 0 n n n ruditapes_c10083 1 1 0 0 n n n ruditapes_c10102 1 1 chromosome 17 open reading frame 27 0 0 n n n ruditapes_c10111 1 1 0 0 n n n ruditapes_c10114 1 1 0 0 n n n ruditapes_c10124 1 1 0 0 n n n ruditapes_c10126 1 1 0 0 n n n ruditapes_c10133 1 1 0 0 n n n ruditapes_c10149 1 1 0 0 n n n ruditapes_c10179 1 1 0 0 n n n ruditapes_c10184 1 1 0 0 n n n ruditapes_c10190 1 1 0 0 n n n ruditapes_c10231 1 1 0 0 n n n ruditapes_c10252 1 1 sarcoplasmic calsium binding protein 0 0 n n n ruditapes_c10253 1 1 0 0 n n n ruditapes_c10258 1 1 0 0 n n n ruditapes_c10291 1 1 0 0 n n n ruditapes_c10309 1 1 hypothetical protein NEMVEDRAFT_v1g145169 [Nematostella vectensis] 0 0 n n n ruditapes_c10316 1 1 0 0 n n n ruditapes_c10341 1 1 cg8129 cg8129-pb /// 0003824 // catalytic activity /// 0005488 // binding 0 0 n n n ruditapes_c10347 1 1 protein 0 0 n n n ruditapes_c1035 1 1 0 0 n n n ruditapes_c10350 1 1 hypothetical protein BRAFLDRAFT_118373 [Branchiostoma floridae] 0 0 n n n ruditapes_c10357 1 1 scavenger receptor cysteine-rich protein type 12 precursor 0 0 n n n ruditapes_c10378 1 1 hypothetical protein BRAFLDRAFT_205221 [Branchiostoma floridae] 0 0 n n n ruditapes_c10397 1 1 0 0 n n n ruditapes_c10398 1 1 0 0 n n n ruditapes_c10407 1 1 0 0 n n n ruditapes_c10413 1 1 0 0 n n n ruditapes_c10426 1 1 0 0 n n n ruditapes_c10440 1 1 0 0 n n n ruditapes_c10449 1 1 0 0 n n n ruditapes_c10482 1 1 0 0 n n n ruditapes_c10492 1 1 0 0 n n n ruditapes_c10505 1 1 radical sam domain protein 0 0 n n n ruditapes_c1056 1 1 cpyc type 0 0 n n n ruditapes_c10570 1 1 0 0 n n n ruditapes_c10575 1 1 hypothetical protein CLOBAR_00823 [Clostridium bartlettii DSM 16795] 0 0 n n n ruditapes_c10581 1 1 0 0 n n n ruditapes_c10585 1 1 0 0 n n n ruditapes_c10586 1 1 0 0 n n n ruditapes_c10587 1 1 hypothetical protein BRAFLDRAFT_206639 [Branchiostoma floridae] 0 0 n n n ruditapes_c10589 1 1 0 0 n n n ruditapes_c10607 1 1 0 0 n n n ruditapes_c10610 1 1 0 0 n n n ruditapes_c10613 1 1 immunity adhesion receptor cd209l2 /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0044464 // cell part /// 0007155 // cell adhesion 0 0 n n n ruditapes_c10630 1 1 predicted protein [Laccaria bicolor S238N-H82] 0 0 n n n ruditapes_c10683 1 1 0 0 n n n ruditapes_c10729 1 1 0 0 n n n ruditapes_c10750 1 1 0 0 n n n ruditapes_c10756 1 1 0 0 n n n ruditapes_c1077 1 1 0 0 n n n ruditapes_c10771 1 1 0 0 n n n ruditapes_c10791 1 1 0 0 n n n ruditapes_c10813 1 1 0 0 n n n ruditapes_c10818 1 1 0 0 n n n ruditapes_c10826 1 1 0 0 n n n ruditapes_c10831 1 1 0 0 n n n ruditapes_c10837 1 1 a chain crystal spectroscopic and catalytic properties of cobalt copper nickel and mercury derivatives of the zinc endopeptidase a correlation of structure and proteolytic activity 0 0 n n n ruditapes_c10838 1 1 0 0 n n n ruditapes_c10854 1 1 0 0 n n n ruditapes_c10864 1 1 0 0 n n n ruditapes_c10869 1 1 0 0 n n n ruditapes_c10870 1 1 0 0 n n n ruditapes_c10893 1 1 0 0 n n n ruditapes_c10920 1 1 collagen type iv alpha 2 0 0 n n n ruditapes_c10923 1 1 0 0 n n n ruditapes_c10936 1 1 0 0 n n n ruditapes_c10937 1 1 PREDICTED: hypothetical protein [Ciona intestinalis] 0 0 n n n ruditapes_c10952 1 1 0 0 n n n ruditapes_c10970 1 1 0 0 n n n ruditapes_c10979 1 1 0 0 n n n ruditapes_c11010 1 1 0 0 n n n ruditapes_c11014 1 1 0 0 n n n ruditapes_c11016 1 1 0 0 n n n ruditapes_c11020 1 1 0 0 n n n ruditapes_c11021 1 1 0 0 n n n ruditapes_c11025 1 1 0 0 n n n ruditapes_c11084 1 1 0 0 n n n ruditapes_c11096 1 1 0 0 n n n ruditapes_c11099 1 1 0 0 n n n ruditapes_c11133 1 1 0 0 n n n ruditapes_c11156 1 1 alpha kinase 0 0 n n n ruditapes_c11166 1 1 0 0 n n n ruditapes_c11188 1 1 0 0 n n n ruditapes_c11199 1 1 0 0 n n n ruditapes_c11205 1 1 0 0 n n n ruditapes_c11211 1 1 0 0 n n n ruditapes_c11220 1 1 0 0 n n n ruditapes_c11229 1 1 0 0 n n n ruditapes_c11268 1 1 0 0 n n n ruditapes_c11281 1 1 0 0 n n n ruditapes_c11319 1 1 0 0 n n n ruditapes_c11320 1 1 0 0 n n n ruditapes_c11328 1 1 0 0 n n n ruditapes_c1133 1 1 0 0 n n n ruditapes_c11334 1 1 0 0 n n n ruditapes_c11337 1 1 carcinolectin 5a isoform /// 0005529 // sugar binding /// 0016337 // cell-cell adhesion 0 0 n n n ruditapes_c11344 1 1 von willebrand factor type egf and pentraxin domain containing 1 0 0 n n n ruditapes_c11345 1 1 0 0 n n n ruditapes_c11362 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c11368 1 1 0 0 n n n ruditapes_c11386 1 1 0 0 n n n ruditapes_c11389 1 1 hemocyte kazal-type proteinase inhibitor 0 0 n n n ruditapes_c11406 1 1 0 0 n n n ruditapes_c11410 1 1 0 0 n n n ruditapes_c11415 1 1 0 0 n n n ruditapes_c11425 1 1 cd209e antigen /// 0005529 // sugar binding 0 0 n n n ruditapes_c11441 1 1 0 0 n n n ruditapes_c11454 1 1 0 0 n n n ruditapes_c11471 1 1 0 0 n n n ruditapes_c11476 1 1 0 0 n n n ruditapes_c11496 1 1 class a rhodopsin-like g-protein coupled receptor 0 0 n n n ruditapes_c11505 1 1 endonuclease reverse transcriptase 0 0 n n n ruditapes_c11526 1 1 0 0 n n n ruditapes_c11556 1 1 tyrosine kinase receptor 0 0 n n n ruditapes_c11561 1 1 0 0 n n n ruditapes_c11568 1 1 0 0 n n n ruditapes_c11573 1 1 0 0 n n n ruditapes_c11606 1 1 0 0 n n n ruditapes_c11616 1 1 0 0 n n n ruditapes_c1162 1 1 0 0 n n n ruditapes_c11628 1 1 0 0 n n n ruditapes_c1164 1 1 0 0 n n n ruditapes_c11642 1 1 0 0 n n n ruditapes_c11643 1 1 0 0 n n n ruditapes_c11646 1 1 0 0 n n n ruditapes_c11650 1 1 0 0 n n n ruditapes_c11669 1 1 0 0 n n n ruditapes_c11685 1 1 0 0 n n n ruditapes_c11707 1 1 0 0 n n n ruditapes_c11716 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c11723 1 1 0 0 n n n ruditapes_c11741 1 1 0 0 n n n ruditapes_c11752 1 1 0 0 n n n ruditapes_c11758 1 1 0 0 n n n ruditapes_c11775 1 1 0 0 n n n ruditapes_c11782 1 1 0 0 n n n ruditapes_c11784 1 1 0 0 n n n ruditapes_c11802 1 1 0 0 n n n ruditapes_c11811 1 1 tenascin r ( janusin) /// 0046625 // sphingolipid binding /// 0005576 // extracellular region /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0007162 // negative regulation of cell adhesion /// 0009986 // cell surface /// 0045121 // membrane raft /// 0007411 // axon guidance 0 0 n n n ruditapes_c11819 1 1 0 0 n n n ruditapes_c11826 1 1 0 0 n n n ruditapes_c11832 1 1 0 0 n n n ruditapes_c11862 1 1 0 0 n n n ruditapes_c11882 1 1 0 0 n n n ruditapes_c11915 1 1 0 0 n n n ruditapes_c11923 1 1 0 0 n n n ruditapes_c11969 1 1 0 0 n n n ruditapes_c11979 1 1 0 0 n n n ruditapes_c11987 1 1 0 0 n n n ruditapes_c11998 1 1 0 0 n n n ruditapes_c11999 1 1 bowman-birk serine protease inhibitor family protein 0 0 n n n ruditapes_c12001 1 1 0 0 n n n ruditapes_c12016 1 1 0 0 n n n ruditapes_c12020 1 1 0 0 n n n ruditapes_c12046 1 1 0 0 n n n ruditapes_c12047 1 1 complement component q subcomponent-like 4 0 0 n n n ruditapes_c1205 1 1 0 0 n n n ruditapes_c12055 1 1 0 0 n n n ruditapes_c12080 1 1 0 0 n n n ruditapes_c12089 1 1 0 0 n n n ruditapes_c12102 1 1 0 0 n n n ruditapes_c12111 1 1 sialic acid binding lectin 0 0 n n n ruditapes_c1213 1 1 0 0 n n n ruditapes_c12135 1 1 0 0 n n n ruditapes_c12144 1 1 0 0 n n n ruditapes_c12150 1 1 0 0 n n n ruditapes_c12153 1 1 0 0 n n n ruditapes_c12160 1 1 hypothetical protein BRAFLDRAFT_67698 [Branchiostoma floridae] 0 0 n n n ruditapes_c12169 1 1 0 0 n n n ruditapes_c1218 1 1 0 0 n n n ruditapes_c12197 1 1 0 0 n n n ruditapes_c12208 1 1 0 0 n n n ruditapes_c12217 1 1 0 0 n n n ruditapes_c12223 1 1 heat shock 70kd protein 12b 0 0 n n n ruditapes_c12251 1 1 0 0 n n n ruditapes_c12257 1 1 0 0 n n n ruditapes_c12268 1 1 0 0 n n n ruditapes_c12285 1 1 0 0 n n n ruditapes_c12291 1 1 0 0 n n n ruditapes_c12296 1 1 0 0 n n n ruditapes_c12313 1 1 0 0 n n n ruditapes_c12333 1 1 0 0 n n n ruditapes_c12338 1 1 0 0 n n n ruditapes_c12339 1 1 c1q and tumor necrosis factor related protein 6 0 0 n n n ruditapes_c12345 1 1 0 0 n n n ruditapes_c12349 1 1 0 0 n n n ruditapes_c12363 1 1 c-type lectin 0 0 n n n ruditapes_c12374 1 1 0 0 n n n ruditapes_c12423 1 1 0 0 n n n ruditapes_c12438 1 1 0 0 n n n ruditapes_c12457 1 1 0 0 n n n ruditapes_c12463 1 1 0 0 n n n ruditapes_c12465 1 1 0 0 n n n ruditapes_c12482 1 1 0 0 n n n ruditapes_c12484 1 1 heat shock protein 8 0 0 n n n ruditapes_c12518 1 1 protein tyrosine receptor c 0 0 n n n ruditapes_c12537 1 1 0 0 n n n ruditapes_c12551 1 1 0 0 n n n ruditapes_c12561 1 1 0 0 n n n ruditapes_c12579 1 1 0 0 n n n ruditapes_c126 1 1 protein 0 0 n n n ruditapes_c12604 1 1 tripartite motif-containing 33 0 0 n n n ruditapes_c12616 1 1 0 0 n n n ruditapes_c12621 1 1 0 0 n n n ruditapes_c12642 1 1 0 0 n n n ruditapes_c12667 1 1 leishmanolysin family protein 0 0 n n n ruditapes_c12676 1 1 0 0 n n n ruditapes_c12685 1 1 0 0 n n n ruditapes_c12702 1 1 0 0 n n n ruditapes_c12716 1 1 0 0 n n n ruditapes_c12720 1 1 0 0 n n n ruditapes_c12731 1 1 0 0 n n n ruditapes_c12732 1 1 0 0 n n n ruditapes_c12741 1 1 0 0 n n n ruditapes_c12746 1 1 0 0 n n n ruditapes_c1276 1 1 lysozyme 0 0 n n n ruditapes_c12779 1 1 0 0 n n n ruditapes_c12786 1 1 0 0 n n n ruditapes_c12796 1 1 0 0 n n n ruditapes_c12820 1 1 0 0 n n n ruditapes_c12862 1 1 0 0 n n n ruditapes_c12863 1 1 0 0 n n n ruditapes_c12884 1 1 0 0 n n n ruditapes_c12916 1 1 0 0 n n n ruditapes_c12919 1 1 0 0 n n n ruditapes_c12924 1 1 0 0 n n n ruditapes_c12945 1 1 0 0 n n n ruditapes_c12948 1 1 general transcription factor ii polypeptide 4 /// 0045449 // regulation of transcription /// 0005622 // intracellular 0 0 n n n ruditapes_c12956 1 1 0 0 n n n ruditapes_c1297 1 1 transmembrane protein 0 0 n n n ruditapes_c12972 1 1 0 0 n n n ruditapes_c12976 1 1 0 0 n n n ruditapes_c12991 1 1 0 0 n n n ruditapes_c12992 1 1 0 0 n n n ruditapes_c13011 1 1 0 0 n n n ruditapes_c13017 1 1 0 0 n n n ruditapes_c13041 1 1 0 0 n n n ruditapes_c13095 1 1 0 0 n n n ruditapes_c13100 1 1 0 0 n n n ruditapes_c13117 1 1 0 0 n n n ruditapes_c13138 1 1 protein /// 0005515 // protein binding /// 0016740 // transferase activity /// 0009987 // cellular process 0 0 n n n ruditapes_c13139 1 1 0 0 n n n ruditapes_c13149 1 1 0 0 n n n ruditapes_c13153 1 1 0 0 n n n ruditapes_c13155 1 1 0 0 n n n ruditapes_c13174 1 1 0 0 n n n ruditapes_c13196 1 1 0 0 n n n ruditapes_c13205 1 1 0 0 n n n ruditapes_c13211 1 1 0 0 n n n ruditapes_c13217 1 1 0 0 n n n ruditapes_c13218 1 1 scavenger receptor class member 1 0 0 n n n ruditapes_c13229 1 1 0 0 n n n ruditapes_c13231 1 1 0 0 n n n ruditapes_c13237 1 1 0 0 n n n ruditapes_c13238 1 1 0 0 n n n ruditapes_c13264 1 1 0 0 n n n ruditapes_c13271 1 1 0 0 n n n ruditapes_c13276 1 1 0 0 n n n ruditapes_c13280 1 1 0 0 n n n ruditapes_c13284 1 1 0 0 n n n ruditapes_c13286 1 1 0 0 n n n ruditapes_c13291 1 1 0 0 n n n ruditapes_c133 1 1 0 0 n n n ruditapes_c13309 1 1 0 0 n n n ruditapes_c13316 1 1 glycoprotein receptor gp330 megalin precursor /// 0044444 // cytoplasmic part /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane /// 0005515 // protein binding 0 0 n n n ruditapes_c13322 1 1 0 0 n n n ruditapes_c13340 1 1 0 0 n n n ruditapes_c13341 1 1 0 0 n n n ruditapes_c13343 1 1 0 0 n n n ruditapes_c13414 1 1 0 0 n n n ruditapes_c13429 1 1 0 0 n n n ruditapes_c13437 1 1 0 0 n n n ruditapes_c13460 1 1 0 0 n n n ruditapes_c13468 1 1 0 0 n n n ruditapes_c13482 1 1 0 0 n n n ruditapes_c13484 1 1 0 0 n n n ruditapes_c13488 1 1 isoform c 0 0 n n n ruditapes_c13496 1 1 0 0 n n n ruditapes_c13497 1 1 0 0 n n n ruditapes_c13511 1 1 0 0 n n n ruditapes_c13515 1 1 0 0 n n n ruditapes_c13524 1 1 0 0 n n n ruditapes_c13532 1 1 0 0 n n n ruditapes_c13543 1 1 0 0 n n n ruditapes_c13555 1 1 0 0 n n n ruditapes_c13568 1 1 0 0 n n n ruditapes_c13571 1 1 0 0 n n n ruditapes_c13582 1 1 map7d2 protein 0 0 n n n ruditapes_c13592 1 1 0 0 n n n ruditapes_c13610 1 1 0 0 n n n ruditapes_c13627 1 1 0 0 n n n ruditapes_c13637 1 1 0 0 n n n ruditapes_c13652 1 1 0 0 n n n ruditapes_c13664 1 1 0 0 n n n ruditapes_c13671 1 1 0 0 n n n ruditapes_c13686 1 1 0 0 n n n ruditapes_c13687 1 1 0 0 n n n ruditapes_c13689 1 1 0 0 n n n ruditapes_c13695 1 1 0 0 n n n ruditapes_c13707 1 1 0 0 n n n ruditapes_c13724 1 1 0 0 n n n ruditapes_c13744 1 1 0 0 n n n ruditapes_c13766 1 1 0 0 n n n ruditapes_c13767 1 1 0 0 n n n ruditapes_c13799 1 1 0 0 n n n ruditapes_c13831 1 1 0 0 n n n ruditapes_c13838 1 1 0 0 n n n ruditapes_c13839 1 1 0 0 n n n ruditapes_c13840 1 1 0 0 n n n ruditapes_c13841 1 1 0 0 n n n ruditapes_c13861 1 1 0 0 n n n ruditapes_c13865 1 1 0 0 n n n ruditapes_c13874 1 1 udp-glucose pyrophosphorylase /// 0008152 // metabolic process /// 0005737 // cytoplasm /// 0000287 // magnesium ion binding /// 0003983 // UTP:glucose-1-phosphate uridylyltransferase activity 0 0 n n n ruditapes_c13875 1 1 0 0 n n n ruditapes_c13887 1 1 0 0 n n n ruditapes_c13890 1 1 low-density lipoprotein 0 0 n n n ruditapes_c13921 1 1 0 0 n n n ruditapes_c13932 1 1 extracellular proteinase inhibitor 0 0 n n n ruditapes_c13933 1 1 0 0 n n n ruditapes_c13935 1 1 0 0 n n n ruditapes_c13938 1 1 0 0 n n n ruditapes_c13942 1 1 0 0 n n n ruditapes_c13951 1 1 0 0 n n n ruditapes_c13952 1 1 mgc82104 protein /// 0033345 // asparagine catabolic process via L-aspartate /// 0004067 // asparaginase activity /// 0005737 // cytoplasm 0 0 n n n ruditapes_c13953 1 1 0 0 n n n ruditapes_c13972 1 1 0 0 n n n ruditapes_c13974 1 1 0 0 n n n ruditapes_c13984 1 1 0 0 n n n ruditapes_c13987 1 1 0 0 n n n ruditapes_c13992 1 1 0 0 n n n ruditapes_c14001 1 1 0 0 n n n ruditapes_c14034 1 1 0 0 n n n ruditapes_c14037 1 1 0 0 n n n ruditapes_c14070 1 1 0 0 n n n ruditapes_c14073 1 1 0 0 n n n ruditapes_c14078 1 1 0 0 n n n ruditapes_c14086 1 1 0 0 n n n ruditapes_c14103 1 1 myosin-rhogap myr /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0044430 // cytoskeletal part 0 0 n n n ruditapes_c14138 1 1 0 0 n n n ruditapes_c14160 1 1 0 0 n n n ruditapes_c14163 1 1 0 0 n n n ruditapes_c14180 1 1 0 0 n n n ruditapes_c14194 1 1 0 0 n n n ruditapes_c14201 1 1 limbic system-associated membrane protein 0 0 n n n ruditapes_c14240 1 1 copper radical oxidase /// 0000910 // cytokinesis /// 0040018 // positive regulation of multicellular organism growth /// 0008340 // determination of adult lifespan /// 0040011 // locomotion /// 0002009 // morphogenesis of an epithelium /// 0044464 // cell part /// 0018991 // oviposition /// 0040025 // vulval development 0 0 n n n ruditapes_c14268 1 1 0 0 n n n ruditapes_c14270 1 1 0 0 n n n ruditapes_c14274 1 1 complement 1 subcomponent q polypeptide gamma 0 0 n n n ruditapes_c14292 1 1 0 0 n n n ruditapes_c14299 1 1 0 0 n n n ruditapes_c14305 1 1 0 0 n n n ruditapes_c14320 1 1 0 0 n n n ruditapes_c14332 1 1 0 0 n n n ruditapes_c14339 1 1 0 0 n n n ruditapes_c14343 1 1 0 0 n n n ruditapes_c14346 1 1 0 0 n n n ruditapes_c14349 1 1 0 0 n n n ruditapes_c14357 1 1 0 0 n n n ruditapes_c14359 1 1 0 0 n n n ruditapes_c14367 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c1438 1 1 metalloproteinase inhibitor 2 precursor 0 0 n n n ruditapes_c14431 1 1 0 0 n n n ruditapes_c14432 1 1 0 0 n n n ruditapes_c14437 1 1 0 0 n n n ruditapes_c14449 1 1 0 0 n n n ruditapes_c14475 1 1 0 0 n n n ruditapes_c14478 1 1 phytanoyl- dioxygenase 0 0 n n n ruditapes_c14483 1 1 0 0 n n n ruditapes_c14484 1 1 0 0 n n n ruditapes_c14500 1 1 0 0 n n n ruditapes_c14509 1 1 0 0 n n n ruditapes_c14523 1 1 0 0 n n n ruditapes_c14529 1 1 0 0 n n n ruditapes_c14544 1 1 zgc:55448 protein 0 0 n n n ruditapes_c14549 1 1 0 0 n n n ruditapes_c14554 1 1 alcohol dehydrogenase /// 0016491 // oxidoreductase activity 0 0 n n n ruditapes_c14559 1 1 0 0 n n n ruditapes_c14568 1 1 0 0 n n n ruditapes_c14571 1 1 0 0 n n n ruditapes_c14594 1 1 0 0 n n n ruditapes_c14611 1 1 0 0 n n n ruditapes_c14633 1 1 hypothetical protein [Plasmodium vivax SaI-1] /// 0005488 // binding /// 0016787 // hydrolase activity 0 0 n n n ruditapes_c14635 1 1 0 0 n n n ruditapes_c14636 1 1 0 0 n n n ruditapes_c14641 1 1 0 0 n n n ruditapes_c14652 1 1 0 0 n n n ruditapes_c14656 1 1 0 0 n n n ruditapes_c14663 1 1 0 0 n n n ruditapes_c14672 1 1 0 0 n n n ruditapes_c14684 1 1 glutaredoxin-1 0 0 n n n ruditapes_c14689 1 1 0 0 n n n ruditapes_c14707 1 1 0 0 n n n ruditapes_c14714 1 1 s-adenosyl-methyltransferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_c14726 1 1 0 0 n n n ruditapes_c14727 1 1 0 0 n n n ruditapes_c1473 1 1 0 0 n n n ruditapes_c14747 1 1 0 0 n n n ruditapes_c14755 1 1 0 0 n n n ruditapes_c14756 1 1 tumor necrosis factor-like protein 0 0 n n n ruditapes_c1476 1 1 0 0 n n n ruditapes_c14763 1 1 0 0 n n n ruditapes_c14768 1 1 0 0 n n n ruditapes_c14780 1 1 0 0 n n n ruditapes_c14785 1 1 0 0 n n n ruditapes_c14792 1 1 tbc1 domain member 23 0 0 n n n ruditapes_c14798 1 1 cytochrome p450 1c2 0 0 n n n ruditapes_c14816 1 1 imap family member 8 0 0 n n n ruditapes_c14818 1 1 0 0 n n n ruditapes_c14827 1 1 0 0 n n n ruditapes_c14833 1 1 0 0 n n n ruditapes_c14841 1 1 carbonic anhydrase ii /// 0042539 // hypotonic salinity response /// 0006814 // sodium ion transport /// 0006885 // regulation of pH /// 0005737 // cytoplasm 0 0 n n n ruditapes_c14842 1 1 0 0 n n n ruditapes_c14845 1 1 hypothetical protein BRAFLDRAFT_74509 [Branchiostoma floridae] 0 0 n n n ruditapes_c14864 1 1 0 0 n n n ruditapes_c14866 1 1 0 0 n n n ruditapes_c14869 1 1 0 0 n n n ruditapes_c14904 1 1 0 0 n n n ruditapes_c14923 1 1 0 0 n n n ruditapes_c14946 1 1 0 0 n n n ruditapes_c14947 1 1 0 0 n n n ruditapes_c14950 1 1 scavenger receptor cysteine-rich protein type 12 precursor 0 0 n n n ruditapes_c1499 1 1 0 0 n n n ruditapes_c15004 1 1 0 0 n n n ruditapes_c15035 1 1 0 0 n n n ruditapes_c15057 1 1 0 0 n n n ruditapes_c15067 1 1 0 0 n n n ruditapes_c15080 1 1 0 0 n n n ruditapes_c15087 1 1 0 0 n n n ruditapes_c15098 1 1 0 0 n n n ruditapes_c15111 1 1 0 0 n n n ruditapes_c15125 1 1 0 0 n n n ruditapes_c15131 1 1 0 0 n n n ruditapes_c15136 1 1 0 0 n n n ruditapes_c15148 1 1 0 0 n n n ruditapes_c15158 1 1 0 0 n n n ruditapes_c15173 1 1 0 0 n n n ruditapes_c15176 1 1 0 0 n n n ruditapes_c15231 1 1 0 0 n n n ruditapes_c15234 1 1 0 0 n n n ruditapes_c15271 1 1 0 0 n n n ruditapes_c15284 1 1 0 0 n n n ruditapes_c15288 1 1 heat shock 70kd protein 12b 0 0 n n n ruditapes_c1530 1 1 0 0 n n n ruditapes_c15305 1 1 0 0 n n n ruditapes_c15321 1 1 0 0 n n n ruditapes_c15343 1 1 mgc108470 protein /// 0005488 // binding 0 0 n n n ruditapes_c15355 1 1 hypothetical protein BRAFLDRAFT_82399 [Branchiostoma floridae] 0 0 n n n ruditapes_c15357 1 1 Pif177 [Pinctada fucata] 0 0 n n n ruditapes_c15384 1 1 0 0 n n n ruditapes_c15387 1 1 0 0 n n n ruditapes_c15400 1 1 0 0 n n n ruditapes_c15405 1 1 0 0 n n n ruditapes_c15427 1 1 0 0 n n n ruditapes_c15437 1 1 0 0 n n n ruditapes_c15453 1 1 0 0 n n n ruditapes_c15458 1 1 0 0 n n n ruditapes_c15469 1 1 0 0 n n n ruditapes_c15472 1 1 glutaredoxin-1 0 0 n n n ruditapes_c15478 1 1 0 0 n n n ruditapes_c15487 1 1 0 0 n n n ruditapes_c15498 1 1 0 0 n n n ruditapes_c15502 1 1 0 0 n n n ruditapes_c15507 1 1 0 0 n n n ruditapes_c15520 1 1 0 0 n n n ruditapes_c15524 1 1 0 0 n n n ruditapes_c15537 1 1 0 0 n n n ruditapes_c15540 1 1 0 0 n n n ruditapes_c15541 1 1 0 0 n n n ruditapes_c15548 1 1 0 0 n n n ruditapes_c15550 1 1 0 0 n n n ruditapes_c15554 1 1 0 0 n n n ruditapes_c15564 1 1 0 0 n n n ruditapes_c15575 1 1 0 0 n n n ruditapes_c15633 1 1 hemagglutinin amebocyte aggregation factor precursor 0 0 n n n ruditapes_c15635 1 1 0 0 n n n ruditapes_c15654 1 1 0 0 n n n ruditapes_c15672 1 1 loc795887 protein 0 0 n n n ruditapes_c15689 1 1 nadh dehydrogenase 1 alpha 8kda "/// 0006810 // transport /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I" 0 0 n n n ruditapes_c15699 1 1 0 0 n n n ruditapes_c15709 1 1 loc795887 protein 0 0 n n n ruditapes_c15715 1 1 0 0 n n n ruditapes_c15721 1 1 0 0 n n n ruditapes_c15722 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c15727 1 1 0 0 n n n ruditapes_c15757 1 1 0 0 n n n ruditapes_c15802 1 1 primary mesenchyme specific protein msp130-related-2 0 0 n n n ruditapes_c15807 1 1 "sidestep protein, putative [Pediculus humanus corporis]" 0 0 n n n ruditapes_c15811 1 1 0 0 n n n ruditapes_c1582 1 1 0 0 n n n ruditapes_c1583 1 1 lysozyme 0 0 n n n ruditapes_c15843 1 1 0 0 n n n ruditapes_c15849 1 1 0 0 n n n ruditapes_c15854 1 1 0 0 n n n ruditapes_c15861 1 1 0 0 n n n ruditapes_c15862 1 1 dopamine n acetyltransferase 0 0 n n n ruditapes_c15878 1 1 c-type lectin 2 0 0 n n n ruditapes_c15882 1 1 0 0 n n n ruditapes_c15935 1 1 0 0 n n n ruditapes_c15942 1 1 haloacid type ii /// 0016787 // hydrolase activity 0 0 n n n ruditapes_c15998 1 1 0 0 n n n ruditapes_c16015 1 1 nfx1-type zinc finger-containing protein 1 /// 0005488 // binding /// 0005622 // intracellular 0 0 n n n ruditapes_c16017 1 1 0 0 n n n ruditapes_c16021 1 1 0 0 n n n ruditapes_c16026 1 1 0 0 n n n ruditapes_c16031 1 1 0 0 n n n ruditapes_c16048 1 1 0 0 n n n ruditapes_c16054 1 1 type alpha 2 0 0 n n n ruditapes_c16064 1 1 0 0 n n n ruditapes_c16114 1 1 hypothetical protein BRAFLDRAFT_76550 [Branchiostoma floridae] 0 0 n n n ruditapes_c1612 1 1 0 0 n n n ruditapes_c16127 1 1 0 0 n n n ruditapes_c16143 1 1 0 0 n n n ruditapes_c16198 1 1 0 0 n n n ruditapes_c16200 1 1 0 0 n n n ruditapes_c16203 1 1 0 0 n n n ruditapes_c16216 1 1 sialic acid binding lectin 0 0 n n n ruditapes_c16223 1 1 0 0 n n n ruditapes_c16230 1 1 0 0 n n n ruditapes_c16244 1 1 0 0 n n n ruditapes_c16266 1 1 0 0 n n n ruditapes_c16283 1 1 0 0 n n n ruditapes_c16299 1 1 0 0 n n n ruditapes_c16302 1 1 0 0 n n n ruditapes_c16303 1 1 0 0 n n n ruditapes_c16325 1 1 0 0 n n n ruditapes_c1635 1 1 0 0 n n n ruditapes_c16362 1 1 0 0 n n n ruditapes_c16379 1 1 0 0 n n n ruditapes_c16385 1 1 mam domain containing glycosylphosphatidylinositol anchor 1 0 0 n n n ruditapes_c16435 1 1 0 0 n n n ruditapes_c16440 1 1 0 0 n n n ruditapes_c16452 1 1 0 0 n n n ruditapes_c16453 1 1 0 0 n n n ruditapes_c16460 1 1 0 0 n n n ruditapes_c16462 1 1 0 0 n n n ruditapes_c16485 1 1 0 0 n n n ruditapes_c16513 1 1 0 0 n n n ruditapes_c16516 1 1 0 0 n n n ruditapes_c16528 1 1 0 0 n n n ruditapes_c16531 1 1 0 0 n n n ruditapes_c16534 1 1 0 0 n n n ruditapes_c16557 1 1 0 0 n n n ruditapes_c16596 1 1 0 0 n n n ruditapes_c16602 1 1 0 0 n n n ruditapes_c16631 1 1 0 0 n n n ruditapes_c16648 1 1 0 0 n n n ruditapes_c16655 1 1 0 0 n n n ruditapes_c16674 1 1 0 0 n n n ruditapes_c16690 1 1 0 0 n n n ruditapes_c16707 1 1 0 0 n n n ruditapes_c16716 1 1 0 0 n n n ruditapes_c16740 1 1 wingless-type mmtv integration site member 2bb "/// 0007275 // multicellular organismal development /// 0007223 // Wnt receptor signaling pathway, calcium modulating pathway /// 0004871 // signal transducer activity /// 0005578 // proteinaceous extracellular matrix" 0 0 n n n ruditapes_c16742 1 1 0 0 n n n ruditapes_c16746 1 1 0 0 n n n ruditapes_c16755 1 1 0 0 n n n ruditapes_c16768 1 1 0 0 n n n ruditapes_c16770 1 1 0 0 n n n ruditapes_c16789 1 1 0 0 n n n ruditapes_c16844 1 1 0 0 n n n ruditapes_c16854 1 1 0 0 n n n ruditapes_c16859 1 1 0 0 n n n ruditapes_c16866 1 1 0 0 n n n ruditapes_c16880 1 1 0 0 n n n ruditapes_c16896 1 1 0 0 n n n ruditapes_c16914 1 1 cg8129 cg8129-pb 0 0 n n n ruditapes_c16970 1 1 0 0 n n n ruditapes_c16975 1 1 0 0 n n n ruditapes_c16995 1 1 btb poz domain containing protein 0 0 n n n ruditapes_c17 1 1 c-type lectin 2 0 0 n n n ruditapes_c1700 1 1 0 0 n n n ruditapes_c17008 1 1 0 0 n n n ruditapes_c17010 1 1 0 0 n n n ruditapes_c17018 1 1 0 0 n n n ruditapes_c17030 1 1 0 0 n n n ruditapes_c17035 1 1 0 0 n n n ruditapes_c17045 1 1 mannose c type 2 0 0 n n n ruditapes_c17050 1 1 0 0 n n n ruditapes_c17057 1 1 0 0 n n n ruditapes_c17065 1 1 0 0 n n n ruditapes_c17081 1 1 0 0 n n n ruditapes_c17112 1 1 0 0 n n n ruditapes_c17114 1 1 0 0 n n n ruditapes_c17118 1 1 0 0 n n n ruditapes_c17149 1 1 0 0 n n n ruditapes_c17155 1 1 0 0 n n n ruditapes_c17157 1 1 0 0 n n n ruditapes_c17165 1 1 0 0 n n n ruditapes_c17166 1 1 0 0 n n n ruditapes_c17188 1 1 0 0 n n n ruditapes_c17197 1 1 0 0 n n n ruditapes_c17200 1 1 0 0 n n n ruditapes_c17232 1 1 retinol retinaldehyde reductase 0 0 n n n ruditapes_c17233 1 1 0 0 n n n ruditapes_c17314 1 1 0 0 n n n ruditapes_c17316 1 1 0 0 n n n ruditapes_c17322 1 1 0 0 n n n ruditapes_c17331 1 1 0 0 n n n ruditapes_c17336 1 1 0 0 n n n ruditapes_c17342 1 1 0 0 n n n ruditapes_c17343 1 1 0 0 n n n ruditapes_c17352 1 1 0 0 n n n ruditapes_c17357 1 1 0 0 n n n ruditapes_c17368 1 1 0 0 n n n ruditapes_c17369 1 1 0 0 n n n ruditapes_c17396 1 1 0 0 n n n ruditapes_c17432 1 1 0 0 n n n ruditapes_c1744 1 1 b chain streptavidin-2-iminobiotin ph space group i222 0 0 n n n ruditapes_c17445 1 1 0 0 n n n ruditapes_c17448 1 1 0 0 n n n ruditapes_c17461 1 1 0 0 n n n ruditapes_c17462 1 1 0 0 n n n ruditapes_c17463 1 1 0 0 n n n ruditapes_c17479 1 1 0 0 n n n ruditapes_c17481 1 1 0 0 n n n ruditapes_c1749 1 1 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0 0 n n n ruditapes_c17505 1 1 0 0 n n n ruditapes_c17507 1 1 0 0 n n n ruditapes_c17511 1 1 0 0 n n n ruditapes_c17515 1 1 0 0 n n n ruditapes_c17537 1 1 sj-bmp2 4 0 0 n n n ruditapes_c17544 1 1 0 0 n n n ruditapes_c17568 1 1 0 0 n n n ruditapes_c17569 1 1 cu zn-superoxide dismutase /// 0006950 // response to stress /// 0044237 // cellular metabolic process /// 0042221 // response to chemical stimulus /// 0005488 // binding /// 0050789 // regulation of biological process /// 0032502 // developmental process /// 0003008 // system process /// 0044424 // intracellular part /// 0042592 // homeostatic process 0 0 n n n ruditapes_c17575 1 1 0 0 n n n ruditapes_c17592 1 1 0 0 n n n ruditapes_c17605 1 1 0 0 n n n ruditapes_c17619 1 1 0 0 n n n ruditapes_c17620 1 1 0 0 n n n ruditapes_c17624 1 1 0 0 n n n ruditapes_c17626 1 1 0 0 n n n ruditapes_c17641 1 1 0 0 n n n ruditapes_c17657 1 1 0 0 n n n ruditapes_c17667 1 1 0 0 n n n ruditapes_c17673 1 1 0 0 n n n ruditapes_c17675 1 1 0 0 n n n ruditapes_c17681 1 1 0 0 n n n ruditapes_c17699 1 1 0 0 n n n ruditapes_c17714 1 1 transmembrane protein 0 0 n n n ruditapes_c17731 1 1 0 0 n n n ruditapes_c17734 1 1 0 0 n n n ruditapes_c17743 1 1 0 0 n n n ruditapes_c17744 1 1 0 0 n n n ruditapes_c17754 1 1 0 0 n n n ruditapes_c17769 1 1 0 0 n n n ruditapes_c17770 1 1 0 0 n n n ruditapes_c17782 1 1 0 0 n n n ruditapes_c17792 1 1 0 0 n n n ruditapes_c17807 1 1 0 0 n n n ruditapes_c17810 1 1 0 0 n n n ruditapes_c17811 1 1 tripartite motif-containing 59 0 0 n n n ruditapes_c17819 1 1 0 0 n n n ruditapes_c17825 1 1 0 0 n n n ruditapes_c17829 1 1 o-glycosyl hydrolase family 30 protein 0 0 n n n ruditapes_c17830 1 1 guanylate binding protein 7 0 0 n n n ruditapes_c17835 1 1 0 0 n n n ruditapes_c17845 1 1 0 0 n n n ruditapes_c17858 1 1 0 0 n n n ruditapes_c17897 1 1 0 0 n n n ruditapes_c17900 1 1 0 0 n n n ruditapes_c17913 1 1 hypothetical protein BRAFLDRAFT_101236 [Branchiostoma floridae] 0 0 n n n ruditapes_c17930 1 1 0 0 n n n ruditapes_c17937 1 1 0 0 n n n ruditapes_c17938 1 1 0 0 n n n ruditapes_c17943 1 1 0 0 n n n ruditapes_c17976 1 1 0 0 n n n ruditapes_c17978 1 1 0 0 n n n ruditapes_c17979 1 1 0 0 n n n ruditapes_c18000 1 1 0 0 n n n ruditapes_c18010 1 1 0 0 n n n ruditapes_c18014 1 1 0 0 n n n ruditapes_c18015 1 1 0 0 n n n ruditapes_c18022 1 1 0 0 n n n ruditapes_c18034 1 1 0 0 n n n ruditapes_c18051 1 1 0 0 n n n ruditapes_c18061 1 1 0 0 n n n ruditapes_c18073 1 1 0 0 n n n ruditapes_c18100 1 1 tripartite motif-containing 25 0 0 n n n ruditapes_c18108 1 1 0 0 n n n ruditapes_c18111 1 1 0 0 n n n ruditapes_c18114 1 1 0 0 n n n ruditapes_c18121 1 1 0 0 n n n ruditapes_c18130 1 1 0 0 n n n ruditapes_c18134 1 1 0 0 n n n ruditapes_c18139 1 1 0 0 n n n ruditapes_c18176 1 1 0 0 n n n ruditapes_c18188 1 1 0 0 n n n ruditapes_c18193 1 1 0 0 n n n ruditapes_c18203 1 1 mgc80260 protein 0 0 n n n ruditapes_c18226 1 1 0 0 n n n ruditapes_c18237 1 1 0 0 n n n ruditapes_c18249 1 1 twitchin [Mytilus galloprovincialis] 0 0 n n n ruditapes_c18255 1 1 0 0 n n n ruditapes_c18282 1 1 0 0 n n n ruditapes_c18283 1 1 0 0 n n n ruditapes_c18304 1 1 hypothetical protein BRAFLDRAFT_225056 [Branchiostoma floridae] 0 0 n n n ruditapes_c18308 1 1 0 0 n n n ruditapes_c18309 1 1 0 0 n n n ruditapes_c18310 1 1 0 0 n n n ruditapes_c18330 1 1 0 0 n n n ruditapes_c18341 1 1 small gtp-binding protein 0 0 n n n ruditapes_c18358 1 1 0 0 n n n ruditapes_c18360 1 1 0 0 n n n ruditapes_c18367 1 1 0 0 n n n ruditapes_c18370 1 1 0 0 n n n ruditapes_c18374 1 1 0 0 n n n ruditapes_c18376 1 1 sodium-dependent glucose transporter 1 0 0 n n n ruditapes_c18383 1 1 0 0 n n n ruditapes_c18385 1 1 tissue specific transplantation antigen p35b /// 0055114 // oxidation reduction /// 0019835 // cytolysis /// 0019941 // modification-dependent protein catabolic process /// 0050577 // GDP-L-fucose synthase activity /// 0019787 // small conjugating protein ligase activity /// 0050662 // coenzyme binding /// 0051246 // regulation of protein metabolic process /// 0043687 // post-translational protein modification /// 0005737 // cytoplasm /// 0042351 // 'de novo' GDP-L-fucose biosynthetic process /// 0042356 // GDP-4-dehydro-D-rhamnose reductase activity /// 0009055 // electron carrier activity /// 0007159 // leukocyte adhesion /// 0016853 // isomerase activity 0 0 n n n ruditapes_c18402 1 1 0 0 n n n ruditapes_c18406 1 1 0 0 n n n ruditapes_c18407 1 1 0 0 n n n ruditapes_c18409 1 1 0 0 n n n ruditapes_c18413 1 1 0 0 n n n ruditapes_c18421 1 1 0 0 n n n ruditapes_c18435 1 1 0 0 n n n ruditapes_c18436 1 1 0 0 n n n ruditapes_c18442 1 1 transposable element tc3 0 0 n n n ruditapes_c18447 1 1 protein 0 0 n n n ruditapes_c18450 1 1 0 0 n n n ruditapes_c18459 1 1 0 0 n n n ruditapes_c18476 1 1 0 0 n n n ruditapes_c18481 1 1 0 0 n n n ruditapes_c18482 1 1 0 0 n n n ruditapes_c18495 1 1 0 0 n n n ruditapes_c18498 1 1 0 0 n n n ruditapes_c18499 1 1 0 0 n n n ruditapes_c18500 1 1 b cell rag associated protein /// 0019319 // hexose biosynthetic process /// 0044464 // cell part /// 0050656 // 3'-phosphoadenosine 5'-phosphosulfate binding /// 0050659 // N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity 0 0 n n n ruditapes_c18503 1 1 0 0 n n n ruditapes_c18511 1 1 0 0 n n n ruditapes_c18517 1 1 0 0 n n n ruditapes_c18533 1 1 0 0 n n n ruditapes_c18537 1 1 0 0 n n n ruditapes_c18542 1 1 0 0 n n n ruditapes_c18544 1 1 0 0 n n n ruditapes_c18552 1 1 0 0 n n n ruditapes_c18554 1 1 0 0 n n n ruditapes_c18555 1 1 0 0 n n n ruditapes_c18556 1 1 protein /// 0005488 // binding /// 0044424 // intracellular part 0 0 n n n ruditapes_c18562 1 1 0 0 n n n ruditapes_c18572 1 1 0 0 n n n ruditapes_c18579 1 1 0 0 n n n ruditapes_c18588 1 1 0 0 n n n ruditapes_c18589 1 1 0 0 n n n ruditapes_c18599 1 1 0 0 n n n ruditapes_c18604 1 1 0 0 n n n ruditapes_c18605 1 1 0 0 n n n ruditapes_c18614 1 1 0 0 n n n ruditapes_c18631 1 1 0 0 n n n ruditapes_c18634 1 1 0 0 n n n ruditapes_c18636 1 1 0 0 n n n ruditapes_c18648 1 1 c-type superfamily member 14 /// 0016020 // membrane 0 0 n n n ruditapes_c1865 1 1 0 0 n n n ruditapes_c18650 1 1 0 0 n n n ruditapes_c18670 1 1 0 0 n n n ruditapes_c18672 1 1 0 0 n n n ruditapes_c18675 1 1 0 0 n n n ruditapes_c18689 1 1 0 0 n n n ruditapes_c18701 1 1 perlucin-like protein isoform b 0 0 n n n ruditapes_c1871 1 1 ovary-specific c1q-like factor 0 0 n n n ruditapes_c18751 1 1 glucosaminyl (n-acetyl) transferase i-branching enzyme (i blood group) 0 0 n n n ruditapes_c18763 1 1 0 0 n n n ruditapes_c18773 1 1 0 0 n n n ruditapes_c18794 1 1 0 0 n n n ruditapes_c18805 1 1 0 0 n n n ruditapes_c18810 1 1 immunity-related gtpase cinema 1 0 0 n n n ruditapes_c18842 1 1 0 0 n n n ruditapes_c18857 1 1 0 0 n n n ruditapes_c18880 1 1 0 0 n n n ruditapes_c18886 1 1 0 0 n n n ruditapes_c18891 1 1 0 0 n n n ruditapes_c18911 1 1 0 0 n n n ruditapes_c18923 1 1 0 0 n n n ruditapes_c18925 1 1 0 0 n n n ruditapes_c18940 1 1 0 0 n n n ruditapes_c18945 1 1 0 0 n n n ruditapes_c18946 1 1 0 0 n n n ruditapes_c18955 1 1 0 0 n n n ruditapes_c18962 1 1 0 0 n n n ruditapes_c18967 1 1 0 0 n n n ruditapes_c18973 1 1 alpha 3 type vi collagen isoform 1 precursor 0 0 n n n ruditapes_c18976 1 1 0 0 n n n ruditapes_c18977 1 1 0 0 n n n ruditapes_c18990 1 1 0 0 n n n ruditapes_c19010 1 1 0 0 n n n ruditapes_c19042 1 1 related to hsp90 associated co-chaperone 0 0 n n n ruditapes_c19043 1 1 0 0 n n n ruditapes_c19057 1 1 0 0 n n n ruditapes_c19059 1 1 0 0 n n n ruditapes_c19069 1 1 0 0 n n n ruditapes_c19072 1 1 0 0 n n n ruditapes_c19094 1 1 0 0 n n n ruditapes_c19108 1 1 0 0 n n n ruditapes_c19112 1 1 0 0 n n n ruditapes_c19135 1 1 0 0 n n n ruditapes_c19137 1 1 0 0 n n n ruditapes_c19152 1 1 0 0 n n n ruditapes_c19161 1 1 0 0 n n n ruditapes_c19168 1 1 0 0 n n n ruditapes_c19181 1 1 0 0 n n n ruditapes_c1920 1 1 protein 0 0 n n n ruditapes_c19206 1 1 0 0 n n n ruditapes_c19213 1 1 0 0 n n n ruditapes_c19214 1 1 c-type lectin 0 0 n n n ruditapes_c19221 1 1 flj45910 protein 0 0 n n n ruditapes_c19238 1 1 0 0 n n n ruditapes_c19245 1 1 0 0 n n n ruditapes_c19256 1 1 tbc1 domain member 10c 0 0 n n n ruditapes_c19258 1 1 0 0 n n n ruditapes_c19276 1 1 0 0 n n n ruditapes_c19280 1 1 0 0 n n n ruditapes_c19290 1 1 0 0 n n n ruditapes_c19295 1 1 0 0 n n n ruditapes_c19296 1 1 0 0 n n n ruditapes_c19299 1 1 integrin alpha hr1 precursor 0 0 n n n ruditapes_c19300 1 1 0 0 n n n ruditapes_c19305 1 1 0 0 n n n ruditapes_c19306 1 1 0 0 n n n ruditapes_c19311 1 1 0 0 n n n ruditapes_c19321 1 1 0 0 n n n ruditapes_c19323 1 1 0 0 n n n ruditapes_c1934 1 1 0 0 n n n ruditapes_c19342 1 1 extracellular solute-binding protein family 5 /// 0006810 // transport /// 0005215 // transporter activity 0 0 n n n ruditapes_c19347 1 1 hypothetical protein BRAFLDRAFT_82399 [Branchiostoma floridae] 0 0 n n n ruditapes_c19360 1 1 0 0 n n n ruditapes_c19365 1 1 0 0 n n n ruditapes_c19373 1 1 0 0 n n n ruditapes_c19405 1 1 0 0 n n n ruditapes_c19419 1 1 0 0 n n n ruditapes_c19442 1 1 0 0 n n n ruditapes_c19476 1 1 0 0 n n n ruditapes_c19477 1 1 0 0 n n n ruditapes_c19494 1 1 isoform b /// 0016021 // integral to membrane /// 0007186 // G-protein coupled receptor protein signaling pathway /// 0016609 // G-protein coupled serotonin receptor activity 0 0 n n n ruditapes_c19498 1 1 0 0 n n n ruditapes_c19507 1 1 spec3 protein /// 0044464 // cell part 0 0 n n n ruditapes_c19511 1 1 0 0 n n n ruditapes_c19526 1 1 nik and ikk binding protein 0 0 n n n ruditapes_c19538 1 1 rad50 homolog ( cerevisiae) 0 0 n n n ruditapes_c19573 1 1 0 0 n n n ruditapes_c19575 1 1 0 0 n n n ruditapes_c19584 1 1 0 0 n n n ruditapes_c19590 1 1 0 0 n n n ruditapes_c19594 1 1 0 0 n n n ruditapes_c19596 1 1 0 0 n n n ruditapes_c196 1 1 protease inhibitor 0 0 n n n ruditapes_c19617 1 1 0 0 n n n ruditapes_c19622 1 1 0 0 n n n ruditapes_c19629 1 1 0 0 n n n ruditapes_c19632 1 1 0 0 n n n ruditapes_c19647 1 1 0 0 n n n ruditapes_c19670 1 1 0 0 n n n ruditapes_c19673 1 1 PREDICTED: hypothetical protein [Homo sapiens] 0 0 n n n ruditapes_c19688 1 1 0 0 n n n ruditapes_c19700 1 1 0 0 n n n ruditapes_c19717 1 1 0 0 n n n ruditapes_c19723 1 1 0 0 n n n ruditapes_c19729 1 1 0 0 n n n ruditapes_c19730 1 1 0 0 n n n ruditapes_c19736 1 1 0 0 n n n ruditapes_c19744 1 1 "Acetylornithine aminotransferase, putative [Perkinsus marinus ATCC 50983]" 0 0 n n n ruditapes_c19747 1 1 novel protein dna polymerases 0 0 n n n ruditapes_c19757 1 1 0 0 n n n ruditapes_c19768 1 1 0 0 n n n ruditapes_c19809 1 1 0 0 n n n ruditapes_c19817 1 1 0 0 n n n ruditapes_c19827 1 1 0 0 n n n ruditapes_c19834 1 1 0 0 n n n ruditapes_c19836 1 1 0 0 n n n ruditapes_c19845 1 1 0 0 n n n ruditapes_c19846 1 1 0 0 n n n ruditapes_c19869 1 1 0 0 n n n ruditapes_c19870 1 1 0 0 n n n ruditapes_c19881 1 1 0 0 n n n ruditapes_c19888 1 1 0 0 n n n ruditapes_c19890 1 1 0 0 n n n ruditapes_c19893 1 1 0 0 n n n ruditapes_c19903 1 1 0 0 n n n ruditapes_c19904 1 1 0 0 n n n ruditapes_c19906 1 1 0 0 n n n ruditapes_c19907 1 1 0 0 n n n ruditapes_c19919 1 1 0 0 n n n ruditapes_c19929 1 1 0 0 n n n ruditapes_c19942 1 1 loc795887 protein 0 0 n n n ruditapes_c19947 1 1 0 0 n n n ruditapes_c19948 1 1 protein 0 0 n n n ruditapes_c19962 1 1 0 0 n n n ruditapes_c19965 1 1 0 0 n n n ruditapes_c19967 1 1 0 0 n n n ruditapes_c19981 1 1 0 0 n n n ruditapes_c19988 1 1 0 0 n n n ruditapes_c19994 1 1 0 0 n n n ruditapes_c20011 1 1 latent transforming growth factor beta binding protein 1 0 0 n n n ruditapes_c20018 1 1 0 0 n n n ruditapes_c20028 1 1 0 0 n n n ruditapes_c20051 1 1 0 0 n n n ruditapes_c20052 1 1 calmodulin 0 0 n n n ruditapes_c20055 1 1 0 0 n n n ruditapes_c20062 1 1 0 0 n n n ruditapes_c20066 1 1 0 0 n n n ruditapes_c20072 1 1 0 0 n n n ruditapes_c20092 1 1 0 0 n n n ruditapes_c20102 1 1 0 0 n n n ruditapes_c20107 1 1 0 0 n n n ruditapes_c20112 1 1 0 0 n n n ruditapes_c20114 1 1 0 0 n n n ruditapes_c20116 1 1 0 0 n n n ruditapes_c20128 1 1 0 0 n n n ruditapes_c20143 1 1 0 0 n n n ruditapes_c20153 1 1 0 0 n n n ruditapes_c20154 1 1 0 0 n n n ruditapes_c20162 1 1 0 0 n n n ruditapes_c20163 1 1 0 0 n n n ruditapes_c20164 1 1 0 0 n n n ruditapes_c20165 1 1 0 0 n n n ruditapes_c20184 1 1 0 0 n n n ruditapes_c20212 1 1 0 0 n n n ruditapes_c20214 1 1 0 0 n n n ruditapes_c20259 1 1 0 0 n n n ruditapes_c20262 1 1 0 0 n n n ruditapes_c20264 1 1 0 0 n n n ruditapes_c20265 1 1 0 0 n n n ruditapes_c20268 1 1 0 0 n n n ruditapes_c20277 1 1 0 0 n n n ruditapes_c20295 1 1 0 0 n n n ruditapes_c20315 1 1 0 0 n n n ruditapes_c20318 1 1 0 0 n n n ruditapes_c20323 1 1 0 0 n n n ruditapes_c20325 1 1 0 0 n n n ruditapes_c20330 1 1 0 0 n n n ruditapes_c20333 1 1 0 0 n n n ruditapes_c20334 1 1 0 0 n n n ruditapes_c20338 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c20341 1 1 0 0 n n n ruditapes_c20346 1 1 0 0 n n n ruditapes_c20356 1 1 0 0 n n n ruditapes_c20359 1 1 0 0 n n n ruditapes_c20366 1 1 0 0 n n n ruditapes_c20378 1 1 0 0 n n n ruditapes_c20390 1 1 0 0 n n n ruditapes_c20404 1 1 0 0 n n n ruditapes_c20405 1 1 0 0 n n n ruditapes_c20410 1 1 0 0 n n n ruditapes_c20413 1 1 0 0 n n n ruditapes_c2043 1 1 0 0 n n n ruditapes_c20433 1 1 0 0 n n n ruditapes_c20439 1 1 0 0 n n n ruditapes_c20440 1 1 0 0 n n n ruditapes_c20441 1 1 0 0 n n n ruditapes_c20445 1 1 0 0 n n n ruditapes_c20447 1 1 0 0 n n n ruditapes_c20455 1 1 0 0 n n n ruditapes_c20466 1 1 0 0 n n n ruditapes_c20475 1 1 0 0 n n n ruditapes_c20512 1 1 0 0 n n n ruditapes_c20538 1 1 sarcoplasmic calcium binding protein 0 0 n n n ruditapes_c20541 1 1 0 0 n n n ruditapes_c20550 1 1 0 0 n n n ruditapes_c20555 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c20556 1 1 0 0 n n n ruditapes_c20561 1 1 0 0 n n n ruditapes_c20570 1 1 0 0 n n n ruditapes_c20574 1 1 0 0 n n n ruditapes_c20586 1 1 0 0 n n n ruditapes_c20595 1 1 0 0 n n n ruditapes_c20596 1 1 0 0 n n n ruditapes_c20608 1 1 0 0 n n n ruditapes_c20609 1 1 0 0 n n n ruditapes_c20611 1 1 0 0 n n n ruditapes_c20612 1 1 0 0 n n n ruditapes_c20613 1 1 ras-like gene family member a /// 0007266 // Rho protein signal transduction /// 0048856 // anatomical structure development /// 0016020 // membrane /// 0003924 // GTPase activity /// 0005515 // protein binding /// 0043229 // intracellular organelle /// 0000166 // nucleotide binding /// 0043123 // positive regulation of I-kappaB kinase/NF-kappaB cascade /// 0030036 // actin cytoskeleton organization /// 0007155 // cell adhesion /// 0042346 // positive regulation of NF-kappaB import into nucleus /// 0048869 // cellular developmental process 0 0 n n n ruditapes_c20615 1 1 0 0 n n n ruditapes_c20618 1 1 0 0 n n n ruditapes_c20639 1 1 0 0 n n n ruditapes_c2064 1 1 0 0 n n n ruditapes_c20647 1 1 0 0 n n n ruditapes_c20655 1 1 0 0 n n n ruditapes_c20658 1 1 0 0 n n n ruditapes_c20661 1 1 0 0 n n n ruditapes_c20665 1 1 0 0 n n n ruditapes_c20671 1 1 serum amyloid a 0 0 n n n ruditapes_c20684 1 1 0 0 n n n ruditapes_c20686 1 1 glucan endo- -beta-d-glucosidase 0 0 n n n ruditapes_c20688 1 1 0 0 n n n ruditapes_c20705 1 1 0 0 n n n ruditapes_c20717 1 1 scavenger receptor cysteine-rich protein type 12 partial 0 0 n n n ruditapes_c20733 1 1 0 0 n n n ruditapes_c20735 1 1 0 0 n n n ruditapes_c20737 1 1 0 0 n n n ruditapes_c20749 1 1 0 0 n n n ruditapes_c20752 1 1 0 0 n n n ruditapes_c20761 1 1 0 0 n n n ruditapes_c20775 1 1 0 0 n n n ruditapes_c20777 1 1 protein 0 0 n n n ruditapes_c20791 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_c20798 1 1 0 0 n n n ruditapes_c20803 1 1 0 0 n n n ruditapes_c20810 1 1 0 0 n n n ruditapes_c20811 1 1 0 0 n n n ruditapes_c20816 1 1 0 0 n n n ruditapes_c20827 1 1 0 0 n n n ruditapes_c20831 1 1 0 0 n n n ruditapes_c20854 1 1 0 0 n n n ruditapes_c20871 1 1 0 0 n n n ruditapes_c20873 1 1 0 0 n n n ruditapes_c20883 1 1 arylsulfatase i /// 0003824 // catalytic activity 0 0 n n n ruditapes_c20884 1 1 0 0 n n n ruditapes_c20902 1 1 0 0 n n n ruditapes_c20913 1 1 col protein 0 0 n n n ruditapes_c20914 1 1 0 0 n n n ruditapes_c20916 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes_c20925 1 1 0 0 n n n ruditapes_c20943 1 1 0 0 n n n ruditapes_c20946 1 1 0 0 n n n ruditapes_c20950 1 1 0 0 n n n ruditapes_c20954 1 1 0 0 n n n ruditapes_c20955 1 1 0 0 n n n ruditapes_c20963 1 1 0 0 n n n ruditapes_c20966 1 1 0 0 n n n ruditapes_c20973 1 1 0 0 n n n ruditapes_c20975 1 1 pol polyprotein 0 0 n n n ruditapes_c20988 1 1 0 0 n n n ruditapes_c20995 1 1 0 0 n n n ruditapes_c21008 1 1 0 0 n n n ruditapes_c21011 1 1 0 0 n n n ruditapes_c21012 1 1 hypothetical protein NEMVEDRAFT_v1g8860 [Nematostella vectensis] 0 0 n n n ruditapes_c21029 1 1 0 0 n n n ruditapes_c21034 1 1 0 0 n n n ruditapes_c21051 1 1 0 0 n n n ruditapes_c21052 1 1 0 0 n n n ruditapes_c21073 1 1 0 0 n n n ruditapes_c21074 1 1 0 0 n n n ruditapes_c21076 1 1 0 0 n n n ruditapes_c21082 1 1 0 0 n n n ruditapes_c21093 1 1 protein 0 0 n n n ruditapes_c21120 1 1 0 0 n n n ruditapes_c21121 1 1 0 0 n n n ruditapes_c21130 1 1 0 0 n n n ruditapes_c21156 1 1 0 0 n n n ruditapes_c21163 1 1 lectin precursor /// 0042742 // defense response to bacterium /// 0005488 // binding 0 0 n n n ruditapes_c21165 1 1 0 0 n n n ruditapes_c2118 1 1 tempt_aplca ame: full=temptin flags: precursor 0 0 n n n ruditapes_c21186 1 1 0 0 n n n ruditapes_c21192 1 1 0 0 n n n ruditapes_c21196 1 1 0 0 n n n ruditapes_c21199 1 1 0 0 n n n ruditapes_c21221 1 1 0 0 n n n ruditapes_c21233 1 1 0 0 n n n ruditapes_c21241 1 1 0 0 n n n ruditapes_c21253 1 1 0 0 n n n ruditapes_c21274 1 1 0 0 n n n ruditapes_c21298 1 1 0 0 n n n ruditapes_c21303 1 1 0 0 n n n ruditapes_c21305 1 1 0 0 n n n ruditapes_c21316 1 1 0 0 n n n ruditapes_c21318 1 1 0 0 n n n ruditapes_c2132 1 1 0 0 n n n ruditapes_c21324 1 1 0 0 n n n ruditapes_c21333 1 1 0 0 n n n ruditapes_c21349 1 1 0 0 n n n ruditapes_c21353 1 1 0 0 n n n ruditapes_c21360 1 1 0 0 n n n ruditapes_c21363 1 1 0 0 n n n ruditapes_c21373 1 1 0 0 n n n ruditapes_c21375 1 1 0 0 n n n ruditapes_c21384 1 1 0 0 n n n ruditapes_c21385 1 1 0 0 n n n ruditapes_c21401 1 1 0 0 n n n ruditapes_c21422 1 1 0 0 n n n ruditapes_c21431 1 1 0 0 n n n ruditapes_c21443 1 1 oxidised low density lipoprotein (lectin-like) receptor 1 /// 0016020 // membrane /// 0005515 // protein binding /// 0004888 // transmembrane receptor activity /// 0009987 // cellular process 0 0 n n n ruditapes_c21469 1 1 0 0 n n n ruditapes_c21473 1 1 0 0 n n n ruditapes_c21483 1 1 0 0 n n n ruditapes_c21493 1 1 0 0 n n n ruditapes_c21516 1 1 0 0 n n n ruditapes_c21517 1 1 very large inducible gtpase 1 0 0 n n n ruditapes_c21518 1 1 0 0 n n n ruditapes_c21526 1 1 0 0 n n n ruditapes_c21535 1 1 0 0 n n n ruditapes_c21542 1 1 0 0 n n n ruditapes_c21545 1 1 0 0 n n n ruditapes_c21548 1 1 0 0 n n n ruditapes_c21555 1 1 0 0 n n n ruditapes_c21557 1 1 0 0 n n n ruditapes_c21560 1 1 0 0 n n n ruditapes_c21573 1 1 0 0 n n n ruditapes_c2158 1 1 protein 0 0 n n n ruditapes_c21583 1 1 0 0 n n n ruditapes_c21584 1 1 0 0 n n n ruditapes_c21585 1 1 0 0 n n n ruditapes_c21587 1 1 0 0 n n n ruditapes_c21611 1 1 0 0 n n n ruditapes_c21615 1 1 0 0 n n n ruditapes_c21622 1 1 0 0 n n n ruditapes_c21630 1 1 0 0 n n n ruditapes_c21634 1 1 0 0 n n n ruditapes_c21653 1 1 0 0 n n n ruditapes_c21662 1 1 0 0 n n n ruditapes_c21664 1 1 0 0 n n n ruditapes_c21682 1 1 0 0 n n n ruditapes_c21683 1 1 0 0 n n n ruditapes_c21685 1 1 0 0 n n n ruditapes_c21686 1 1 0 0 n n n ruditapes_c217 1 1 0 0 n n n ruditapes_c21709 1 1 0 0 n n n ruditapes_c21710 1 1 0 0 n n n ruditapes_c21711 1 1 0 0 n n n ruditapes_c21716 1 1 0 0 n n n ruditapes_c21730 1 1 0 0 n n n ruditapes_c2174 1 1 0 0 n n n ruditapes_c2176 1 1 0 0 n n n ruditapes_c21788 1 1 0 0 n n n ruditapes_c21793 1 1 0 0 n n n ruditapes_c2180 1 1 0 0 n n n ruditapes_c21803 1 1 0 0 n n n ruditapes_c21805 1 1 loc795887 protein 0 0 n n n ruditapes_c21825 1 1 0 0 n n n ruditapes_c21848 1 1 0 0 n n n ruditapes_c21870 1 1 0 0 n n n ruditapes_c21874 1 1 0 0 n n n ruditapes_c21897 1 1 dual oxidase 1 0 0 n n n ruditapes_c21903 1 1 0 0 n n n ruditapes_c21907 1 1 0 0 n n n ruditapes_c21912 1 1 0 0 n n n ruditapes_c21914 1 1 0 0 n n n ruditapes_c21922 1 1 0 0 n n n ruditapes_c21926 1 1 0 0 n n n ruditapes_c21930 1 1 0 0 n n n ruditapes_c21941 1 1 hypothetical protein BRAFLDRAFT_82399 [Branchiostoma floridae] 0 0 n n n ruditapes_c21949 1 1 protein tyrosine receptor k 0 0 n n n ruditapes_c21952 1 1 0 0 n n n ruditapes_c21976 1 1 PREDICTED: similar to PNR-like [Tribolium castaneum] 0 0 n n n ruditapes_c21986 1 1 0 0 n n n ruditapes_c21991 1 1 0 0 n n n ruditapes_c21996 1 1 0 0 n n n ruditapes_c21998 1 1 0 0 n n n ruditapes_c22043 1 1 0 0 n n n ruditapes_c22053 1 1 0 0 n n n ruditapes_c22063 1 1 0 0 n n n ruditapes_c22078 1 1 0 0 n n n ruditapes_c22092 1 1 aslectin al-1 0 0 n n n ruditapes_c22096 1 1 0 0 n n n ruditapes_c22108 1 1 0 0 n n n ruditapes_c22110 1 1 0 0 n n n ruditapes_c22115 1 1 0 0 n n n ruditapes_c22126 1 1 0 0 n n n ruditapes_c22131 1 1 tandem repeat galectin 0 0 n n n ruditapes_c22154 1 1 0 0 n n n ruditapes_c22160 1 1 0 0 n n n ruditapes_c22169 1 1 0 0 n n n ruditapes_c22184 1 1 0 0 n n n ruditapes_c22205 1 1 0 0 n n n ruditapes_c22219 1 1 0 0 n n n ruditapes_c22232 1 1 3-hydroxyacyl-coa dehyrogenase 0 0 n n n ruditapes_c22242 1 1 0 0 n n n ruditapes_c22248 1 1 0 0 n n n ruditapes_c22259 1 1 0 0 n n n ruditapes_c22264 1 1 0 0 n n n ruditapes_c22273 1 1 0 0 n n n ruditapes_c22274 1 1 0 0 n n n ruditapes_c22286 1 1 0 0 n n n ruditapes_c22292 1 1 0 0 n n n ruditapes_c22294 1 1 0 0 n n n ruditapes_c22304 1 1 0 0 n n n ruditapes_c22307 1 1 0 0 n n n ruditapes_c22315 1 1 0 0 n n n ruditapes_c22319 1 1 0 0 n n n ruditapes_c22322 1 1 0 0 n n n ruditapes_c22331 1 1 0 0 n n n ruditapes_c22350 1 1 0 0 n n n ruditapes_c22353 1 1 0 0 n n n ruditapes_c22360 1 1 0 0 n n n ruditapes_c22377 1 1 0 0 n n n ruditapes_c22385 1 1 bone morphogenetic protein 1 0 0 n n n ruditapes_c22400 1 1 0 0 n n n ruditapes_c22407 1 1 0 0 n n n ruditapes_c22417 1 1 0 0 n n n ruditapes_c22418 1 1 0 0 n n n ruditapes_c22424 1 1 0 0 n n n ruditapes_c22434 1 1 0 0 n n n ruditapes_c22438 1 1 0 0 n n n ruditapes_c22439 1 1 0 0 n n n ruditapes_c22445 1 1 0 0 n n n ruditapes_c22450 1 1 0 0 n n n ruditapes_c22456 1 1 0 0 n n n ruditapes_c22480 1 1 0 0 n n n ruditapes_c22484 1 1 0 0 n n n ruditapes_c22488 1 1 0 0 n n n ruditapes_c22492 1 1 0 0 n n n ruditapes_c225 1 1 0 0 n n n ruditapes_c22501 1 1 hypothetical protein BRAFLDRAFT_75504 [Branchiostoma floridae] 0 0 n n n ruditapes_c22504 1 1 0 0 n n n ruditapes_c22509 1 1 0 0 n n n ruditapes_c22519 1 1 0 0 n n n ruditapes_c22522 1 1 ovary-specific c1q-like factor /// 0032502 // developmental process /// 0048523 // negative regulation of cellular process 0 0 n n n ruditapes_c22533 1 1 0 0 n n n ruditapes_c22543 1 1 0 0 n n n ruditapes_c22551 1 1 0 0 n n n ruditapes_c22566 1 1 0 0 n n n ruditapes_c22586 1 1 0 0 n n n ruditapes_c22588 1 1 0 0 n n n ruditapes_c22591 1 1 0 0 n n n ruditapes_c22600 1 1 plasminogen /// 0042246 // tissue regeneration /// 0016525 // negative regulation of angiogenesis /// 0006917 // induction of apoptosis /// 0008233 // peptidase activity /// 0046716 // muscle maintenance /// 0045445 // myoblast differentiation 0 0 n n n ruditapes_c22602 1 1 0 0 n n n ruditapes_c22604 1 1 0 0 n n n ruditapes_c22616 1 1 0 0 n n n ruditapes_c22625 1 1 0 0 n n n ruditapes_c22632 1 1 0 0 n n n ruditapes_c22663 1 1 0 0 n n n ruditapes_c22665 1 1 0 0 n n n ruditapes_c22673 1 1 0 0 n n n ruditapes_c22686 1 1 0 0 n n n ruditapes_c22687 1 1 0 0 n n n ruditapes_c22701 1 1 0 0 n n n ruditapes_c22706 1 1 0 0 n n n ruditapes_c22707 1 1 0 0 n n n ruditapes_c22710 1 1 0 0 n n n ruditapes_c22711 1 1 hypothetical protein BRAFLDRAFT_67695 [Branchiostoma floridae] 0 0 n n n ruditapes_c22732 1 1 0 0 n n n ruditapes_c22739 1 1 0 0 n n n ruditapes_c22747 1 1 0 0 n n n ruditapes_c22748 1 1 0 0 n n n ruditapes_c22763 1 1 0 0 n n n ruditapes_c22777 1 1 0 0 n n n ruditapes_c22796 1 1 hypothetical protein [Trichomonas vaginalis G3] 0 0 n n n ruditapes_c22802 1 1 0 0 n n n ruditapes_c2281 1 1 lysozyme 0 0 n n n ruditapes_c22815 1 1 si:rp71- protein 0 0 n n n ruditapes_c22828 1 1 0 0 n n n ruditapes_c22853 1 1 0 0 n n n ruditapes_c22859 1 1 0 0 n n n ruditapes_c22867 1 1 0 0 n n n ruditapes_c22871 1 1 0 0 n n n ruditapes_c22891 1 1 0 0 n n n ruditapes_c22896 1 1 0 0 n n n ruditapes_c22902 1 1 0 0 n n n ruditapes_c22907 1 1 0 0 n n n ruditapes_c22921 1 1 0 0 n n n ruditapes_c22924 1 1 0 0 n n n ruditapes_c22934 1 1 0 0 n n n ruditapes_c22949 1 1 0 0 n n n ruditapes_c22955 1 1 0 0 n n n ruditapes_c22958 1 1 0 0 n n n ruditapes_c22963 1 1 0 0 n n n ruditapes_c22966 1 1 0 0 n n n ruditapes_c22968 1 1 0 0 n n n ruditapes_c2297 1 1 hypothetical protein BRAFLDRAFT_68166 [Branchiostoma floridae] 0 0 n n n ruditapes_c22972 1 1 0 0 n n n ruditapes_c22974 1 1 0 0 n n n ruditapes_c22981 1 1 0 0 n n n ruditapes_c22982 1 1 0 0 n n n ruditapes_c22983 1 1 0 0 n n n ruditapes_c22993 1 1 0 0 n n n ruditapes_c22994 1 1 hypothetical protein TRIADDRAFT_58856 [Trichoplax adhaerens] 0 0 n n n ruditapes_c23002 1 1 0 0 n n n ruditapes_c23004 1 1 0 0 n n n ruditapes_c23010 1 1 0 0 n n n ruditapes_c23013 1 1 0 0 n n n ruditapes_c23019 1 1 0 0 n n n ruditapes_c23042 1 1 0 0 n n n ruditapes_c23045 1 1 0 0 n n n ruditapes_c23053 1 1 0 0 n n n ruditapes_c23054 1 1 0 0 n n n ruditapes_c23070 1 1 0 0 n n n ruditapes_c23071 1 1 0 0 n n n ruditapes_c23079 1 1 0 0 n n n ruditapes_c23081 1 1 0 0 n n n ruditapes_c23085 1 1 0 0 n n n ruditapes_c23086 1 1 0 0 n n n ruditapes_c23088 1 1 0 0 n n n ruditapes_c23094 1 1 0 0 n n n ruditapes_c23097 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c23109 1 1 0 0 n n n ruditapes_c23127 1 1 0 0 n n n ruditapes_c23137 1 1 0 0 n n n ruditapes_c23157 1 1 0 0 n n n ruditapes_c23163 1 1 protein 0 0 n n n ruditapes_c23171 1 1 0 0 n n n ruditapes_c23174 1 1 0 0 n n n ruditapes_c23177 1 1 0 0 n n n ruditapes_c23179 1 1 chloride channel calcium activated 3 0 0 n n n ruditapes_c23183 1 1 0 0 n n n ruditapes_c23186 1 1 0 0 n n n ruditapes_c23188 1 1 0 0 n n n ruditapes_c23190 1 1 0 0 n n n ruditapes_c23196 1 1 0 0 n n n ruditapes_c23205 1 1 0 0 n n n ruditapes_c23209 1 1 0 0 n n n ruditapes_c23219 1 1 nicotinate phosphoribosyltransferase /// 0016740 // transferase activity 0 0 n n n ruditapes_c23235 1 1 0 0 n n n ruditapes_c23245 1 1 0 0 n n n ruditapes_c23249 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c23262 1 1 0 0 n n n ruditapes_c23287 1 1 0 0 n n n ruditapes_c23291 1 1 0 0 n n n ruditapes_c23297 1 1 0 0 n n n ruditapes_c23302 1 1 0 0 n n n ruditapes_c23308 1 1 0 0 n n n ruditapes_c23315 1 1 0 0 n n n ruditapes_c23321 1 1 0 0 n n n ruditapes_c23324 1 1 0 0 n n n ruditapes_c23339 1 1 0 0 n n n ruditapes_c23345 1 1 0 0 n n n ruditapes_c23359 1 1 0 0 n n n ruditapes_c23360 1 1 0 0 n n n ruditapes_c23364 1 1 0 0 n n n ruditapes_c23366 1 1 0 0 n n n ruditapes_c23392 1 1 0 0 n n n ruditapes_c23423 1 1 0 0 n n n ruditapes_c23432 1 1 0 0 n n n ruditapes_c23456 1 1 0 0 n n n ruditapes_c23472 1 1 hypothetical protein BRAFLDRAFT_83226 [Branchiostoma floridae] 0 0 n n n ruditapes_c23488 1 1 0 0 n n n ruditapes_c23489 1 1 0 0 n n n ruditapes_c23490 1 1 0 0 n n n ruditapes_c23496 1 1 0 0 n n n ruditapes_c23500 1 1 0 0 n n n ruditapes_c23509 1 1 0 0 n n n ruditapes_c23514 1 1 0 0 n n n ruditapes_c23534 1 1 0 0 n n n ruditapes_c23547 1 1 0 0 n n n ruditapes_c23557 1 1 0 0 n n n ruditapes_c23559 1 1 0 0 n n n ruditapes_c23563 1 1 0 0 n n n ruditapes_c23564 1 1 0 0 n n n ruditapes_c23566 1 1 0 0 n n n ruditapes_c23581 1 1 0 0 n n n ruditapes_c23583 1 1 0 0 n n n ruditapes_c23613 1 1 0 0 n n n ruditapes_c23620 1 1 0 0 n n n ruditapes_c23622 1 1 0 0 n n n ruditapes_c23633 1 1 0 0 n n n ruditapes_c23636 1 1 heat shock 70kda protein 12a 0 0 n n n ruditapes_c23645 1 1 0 0 n n n ruditapes_c23653 1 1 0 0 n n n ruditapes_c23656 1 1 0 0 n n n ruditapes_c23657 1 1 0 0 n n n ruditapes_c23660 1 1 0 0 n n n ruditapes_c23668 1 1 0 0 n n n ruditapes_c23678 1 1 0 0 n n n ruditapes_c23682 1 1 0 0 n n n ruditapes_c23693 1 1 0 0 n n n ruditapes_c23715 1 1 0 0 n n n ruditapes_c23741 1 1 intracellular fatty acid binding protein 0 0 n n n ruditapes_c23743 1 1 0 0 n n n ruditapes_c23745 1 1 0 0 n n n ruditapes_c23751 1 1 0 0 n n n ruditapes_c23755 1 1 0 0 n n n ruditapes_c23761 1 1 0 0 n n n ruditapes_c23782 1 1 imap family member 7 /// 0044464 // cell part 0 0 n n n ruditapes_c23788 1 1 0 0 n n n ruditapes_c23791 1 1 0 0 n n n ruditapes_c23792 1 1 0 0 n n n ruditapes_c23803 1 1 0 0 n n n ruditapes_c23805 1 1 0 0 n n n ruditapes_c23809 1 1 0 0 n n n ruditapes_c23814 1 1 0 0 n n n ruditapes_c23817 1 1 0 0 n n n ruditapes_c23820 1 1 0 0 n n n ruditapes_c23823 1 1 0 0 n n n ruditapes_c23838 1 1 0 0 n n n ruditapes_c2384 1 1 0 0 n n n ruditapes_c23845 1 1 0 0 n n n ruditapes_c23847 1 1 0 0 n n n ruditapes_c23854 1 1 0 0 n n n ruditapes_c23863 1 1 0 0 n n n ruditapes_c23871 1 1 0 0 n n n ruditapes_c23881 1 1 0 0 n n n ruditapes_c23883 1 1 0 0 n n n ruditapes_c23896 1 1 0 0 n n n ruditapes_c23903 1 1 0 0 n n n ruditapes_c23912 1 1 0 0 n n n ruditapes_c23930 1 1 0 0 n n n ruditapes_c23938 1 1 0 0 n n n ruditapes_c23939 1 1 0 0 n n n ruditapes_c23941 1 1 0 0 n n n ruditapes_c23942 1 1 0 0 n n n ruditapes_c23943 1 1 0 0 n n n ruditapes_c23987 1 1 0 0 n n n ruditapes_c24003 1 1 0 0 n n n ruditapes_c24006 1 1 0 0 n n n ruditapes_c24012 1 1 0 0 n n n ruditapes_c24013 1 1 0 0 n n n ruditapes_c24020 1 1 0 0 n n n ruditapes_c24027 1 1 0 0 n n n ruditapes_c24034 1 1 0 0 n n n ruditapes_c24069 1 1 0 0 n n n ruditapes_c24076 1 1 0 0 n n n ruditapes_c24082 1 1 0 0 n n n ruditapes_c24087 1 1 0 0 n n n ruditapes_c24105 1 1 0 0 n n n ruditapes_c24109 1 1 0 0 n n n ruditapes_c24116 1 1 0 0 n n n ruditapes_c24119 1 1 0 0 n n n ruditapes_c24136 1 1 0 0 n n n ruditapes_c24154 1 1 0 0 n n n ruditapes_c24156 1 1 0 0 n n n ruditapes_c24159 1 1 0 0 n n n ruditapes_c24166 1 1 0 0 n n n ruditapes_c24167 1 1 0 0 n n n ruditapes_c24180 1 1 zygote arrest 1 0 0 n n n ruditapes_c24181 1 1 0 0 n n n ruditapes_c24183 1 1 0 0 n n n ruditapes_c24184 1 1 0 0 n n n ruditapes_c24187 1 1 0 0 n n n ruditapes_c24213 1 1 0 0 n n n ruditapes_c2422 1 1 whey acidic protein precursor 0 0 n n n ruditapes_c24236 1 1 0 0 n n n ruditapes_c24239 1 1 0 0 n n n ruditapes_c24242 1 1 0 0 n n n ruditapes_c24243 1 1 0 0 n n n ruditapes_c24244 1 1 0 0 n n n ruditapes_c24247 1 1 0 0 n n n ruditapes_c24253 1 1 0 0 n n n ruditapes_c24277 1 1 0 0 n n n ruditapes_c24284 1 1 toll-like receptor (agap006974-pa) 0 0 n n n ruditapes_c24311 1 1 0 0 n n n ruditapes_c24314 1 1 amyloid beta precursor protein a 0 0 n n n ruditapes_c24323 1 1 0 0 n n n ruditapes_c24326 1 1 0 0 n n n ruditapes_c24337 1 1 0 0 n n n ruditapes_c24340 1 1 0 0 n n n ruditapes_c24364 1 1 0 0 n n n ruditapes_c24368 1 1 0 0 n n n ruditapes_c24369 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c24389 1 1 0 0 n n n ruditapes_c24398 1 1 0 0 n n n ruditapes_c24399 1 1 0 0 n n n ruditapes_c24410 1 1 0 0 n n n ruditapes_c24421 1 1 0 0 n n n ruditapes_c24427 1 1 0 0 n n n ruditapes_c24433 1 1 heat shock 70kda protein 12a 0 0 n n n ruditapes_c24443 1 1 0 0 n n n ruditapes_c24460 1 1 0 0 n n n ruditapes_c24467 1 1 0 0 n n n ruditapes_c24489 1 1 0 0 n n n ruditapes_c24496 1 1 extracellular peptidase inhibitor 0 0 n n n ruditapes_c24507 1 1 0 0 n n n ruditapes_c24511 1 1 0 0 n n n ruditapes_c24513 1 1 0 0 n n n ruditapes_c24523 1 1 0 0 n n n ruditapes_c24530 1 1 0 0 n n n ruditapes_c24532 1 1 0 0 n n n ruditapes_c24549 1 1 0 0 n n n ruditapes_c24555 1 1 cd209 protein /// 0006810 // transport /// 0022415 // viral reproductive process /// 0051701 // interaction with host /// 0005488 // binding /// 0044464 // cell part /// 0007155 // cell adhesion 0 0 n n n ruditapes_c24559 1 1 0 0 n n n ruditapes_c24571 1 1 0 0 n n n ruditapes_c24574 1 1 0 0 n n n ruditapes_c24577 1 1 0 0 n n n ruditapes_c24587 1 1 0 0 n n n ruditapes_c24598 1 1 0 0 n n n ruditapes_c24618 1 1 0 0 n n n ruditapes_c24620 1 1 0 0 n n n ruditapes_c24631 1 1 0 0 n n n ruditapes_c24681 1 1 0 0 n n n ruditapes_c24696 1 1 0 0 n n n ruditapes_c24710 1 1 0 0 n n n ruditapes_c24718 1 1 0 0 n n n ruditapes_c24725 1 1 0 0 n n n ruditapes_c24763 1 1 0 0 n n n ruditapes_c24775 1 1 0 0 n n n ruditapes_c24779 1 1 0 0 n n n ruditapes_c24780 1 1 hypothetical protein BRAFLDRAFT_206639 [Branchiostoma floridae] 0 0 n n n ruditapes_c24781 1 1 0 0 n n n ruditapes_c24787 1 1 0 0 n n n ruditapes_c2479 1 1 serine proteinase /// 0004866 // endopeptidase inhibitor activity 0 0 n n n ruditapes_c24803 1 1 0 0 n n n ruditapes_c24805 1 1 0 0 n n n ruditapes_c24816 1 1 0 0 n n n ruditapes_c24831 1 1 0 0 n n n ruditapes_c24834 1 1 0 0 n n n ruditapes_c24839 1 1 0 0 n n n ruditapes_c24849 1 1 0 0 n n n ruditapes_c24862 1 1 0 0 n n n ruditapes_c24888 1 1 0 0 n n n ruditapes_c24893 1 1 0 0 n n n ruditapes_c24898 1 1 0 0 n n n ruditapes_c24900 1 1 0 0 n n n ruditapes_c24903 1 1 0 0 n n n ruditapes_c24913 1 1 0 0 n n n ruditapes_c24921 1 1 0 0 n n n ruditapes_c24944 1 1 0 0 n n n ruditapes_c24952 1 1 0 0 n n n ruditapes_c24984 1 1 0 0 n n n ruditapes_c25009 1 1 0 0 n n n ruditapes_c25020 1 1 0 0 n n n ruditapes_c25025 1 1 0 0 n n n ruditapes_c25050 1 1 0 0 n n n ruditapes_c25058 1 1 0 0 n n n ruditapes_c25073 1 1 0 0 n n n ruditapes_c25078 1 1 0 0 n n n ruditapes_c25082 1 1 0 0 n n n ruditapes_c25086 1 1 0 0 n n n ruditapes_c25098 1 1 0 0 n n n ruditapes_c25100 1 1 0 0 n n n ruditapes_c25106 1 1 0 0 n n n ruditapes_c25107 1 1 0 0 n n n ruditapes_c2511 1 1 0 0 n n n ruditapes_c25112 1 1 0 0 n n n ruditapes_c25131 1 1 0 0 n n n ruditapes_c25147 1 1 0 0 n n n ruditapes_c25148 1 1 0 0 n n n ruditapes_c25149 1 1 0 0 n n n ruditapes_c25163 1 1 0 0 n n n ruditapes_c25164 1 1 0 0 n n n ruditapes_c25169 1 1 0 0 n n n ruditapes_c25178 1 1 fad dependent oxidoreductase /// 0004368 // glycerol-3-phosphate dehydrogenase activity /// 0006072 // glycerol-3-phosphate metabolic process /// 0009331 // glycerol-3-phosphate dehydrogenase complex 0 0 n n n ruditapes_c25180 1 1 0 0 n n n ruditapes_c25189 1 1 0 0 n n n ruditapes_c25191 1 1 0 0 n n n ruditapes_c25192 1 1 0 0 n n n ruditapes_c25198 1 1 mantle gene 1 0 0 n n n ruditapes_c25200 1 1 0 0 n n n ruditapes_c25211 1 1 0 0 n n n ruditapes_c25222 1 1 0 0 n n n ruditapes_c25236 1 1 0 0 n n n ruditapes_c25242 1 1 0 0 n n n ruditapes_c25250 1 1 0 0 n n n ruditapes_c25253 1 1 0 0 n n n ruditapes_c25259 1 1 0 0 n n n ruditapes_c25266 1 1 0 0 n n n ruditapes_c25268 1 1 0 0 n n n ruditapes_c25279 1 1 0 0 n n n ruditapes_c25281 1 1 adp ribosylation factor 1 0 0 n n n ruditapes_c25290 1 1 0 0 n n n ruditapes_c25292 1 1 0 0 n n n ruditapes_c25307 1 1 0 0 n n n ruditapes_c25310 1 1 0 0 n n n ruditapes_c25312 1 1 0 0 n n n ruditapes_c25318 1 1 inhibitor of apoptosis protein 1 0 0 n n n ruditapes_c25320 1 1 0 0 n n n ruditapes_c25321 1 1 0 0 n n n ruditapes_c25346 1 1 0 0 n n n ruditapes_c25359 1 1 0 0 n n n ruditapes_c25374 1 1 0 0 n n n ruditapes_c25382 1 1 0 0 n n n ruditapes_c2542 1 1 0 0 n n n ruditapes_c25425 1 1 0 0 n n n ruditapes_c25427 1 1 0 0 n n n ruditapes_c25431 1 1 0 0 n n n ruditapes_c25448 1 1 0 0 n n n ruditapes_c25474 1 1 0 0 n n n ruditapes_c25477 1 1 0 0 n n n ruditapes_c25493 1 1 0 0 n n n ruditapes_c25504 1 1 0 0 n n n ruditapes_c25510 1 1 0 0 n n n ruditapes_c25524 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c25531 1 1 0 0 n n n ruditapes_c25538 1 1 0 0 n n n ruditapes_c25540 1 1 0 0 n n n ruditapes_c25548 1 1 0 0 n n n ruditapes_c25574 1 1 0 0 n n n ruditapes_c25583 1 1 0 0 n n n ruditapes_c25586 1 1 0 0 n n n ruditapes_c25587 1 1 0 0 n n n ruditapes_c25590 1 1 0 0 n n n ruditapes_c25597 1 1 0 0 n n n ruditapes_c25603 1 1 0 0 n n n ruditapes_c25606 1 1 0 0 n n n ruditapes_c25610 1 1 0 0 n n n ruditapes_c25612 1 1 0 0 n n n ruditapes_c25618 1 1 0 0 n n n ruditapes_c25649 1 1 0 0 n n n ruditapes_c25655 1 1 0 0 n n n ruditapes_c25662 1 1 0 0 n n n ruditapes_c25668 1 1 0 0 n n n ruditapes_c25686 1 1 0 0 n n n ruditapes_c25691 1 1 0 0 n n n ruditapes_c25710 1 1 0 0 n n n ruditapes_c25719 1 1 0 0 n n n ruditapes_c25724 1 1 0 0 n n n ruditapes_c25729 1 1 0 0 n n n ruditapes_c25736 1 1 0 0 n n n ruditapes_c25737 1 1 0 0 n n n ruditapes_c25742 1 1 0 0 n n n ruditapes_c25751 1 1 0 0 n n n ruditapes_c25764 1 1 0 0 n n n ruditapes_c25770 1 1 0 0 n n n ruditapes_c25784 1 1 0 0 n n n ruditapes_c25786 1 1 0 0 n n n ruditapes_c25795 1 1 0 0 n n n ruditapes_c25796 1 1 0 0 n n n ruditapes_c25811 1 1 0 0 n n n ruditapes_c25812 1 1 0 0 n n n ruditapes_c25813 1 1 0 0 n n n ruditapes_c25820 1 1 0 0 n n n ruditapes_c25825 1 1 perlucin-like protein isoform a 0 0 n n n ruditapes_c25832 1 1 0 0 n n n ruditapes_c25838 1 1 0 0 n n n ruditapes_c25845 1 1 0 0 n n n ruditapes_c25863 1 1 0 0 n n n ruditapes_c25867 1 1 0 0 n n n ruditapes_c25880 1 1 0 0 n n n ruditapes_c25888 1 1 0 0 n n n ruditapes_c25893 1 1 0 0 n n n ruditapes_c25900 1 1 0 0 n n n ruditapes_c25906 1 1 0 0 n n n ruditapes_c25926 1 1 0 0 n n n ruditapes_c25927 1 1 0 0 n n n ruditapes_c25950 1 1 0 0 n n n ruditapes_c25961 1 1 0 0 n n n ruditapes_c25978 1 1 0 0 n n n ruditapes_c25986 1 1 0 0 n n n ruditapes_c25990 1 1 0 0 n n n ruditapes_c25993 1 1 0 0 n n n ruditapes_c25998 1 1 0 0 n n n ruditapes_c26001 1 1 0 0 n n n ruditapes_c26024 1 1 0 0 n n n ruditapes_c26057 1 1 0 0 n n n ruditapes_c26069 1 1 nad-dependent epimerase dehydratase /// 0055114 // oxidation reduction /// 0044237 // cellular metabolic process /// 0050662 // coenzyme binding /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0016564 // transcription repressor activity /// 0006808 // regulation of nitrogen utilization /// 0016853 // isomerase activity 0 0 n n n ruditapes_c26070 1 1 0 0 n n n ruditapes_c26079 1 1 0 0 n n n ruditapes_c26082 1 1 hypothetical protein CLOSCI_03388 [Clostridium scindens ATCC 35704] 0 0 n n n ruditapes_c26088 1 1 0 0 n n n ruditapes_c26098 1 1 0 0 n n n ruditapes_c26109 1 1 0 0 n n n ruditapes_c26119 1 1 0 0 n n n ruditapes_c26144 1 1 family with sequence similarity member b 0 0 n n n ruditapes_c26154 1 1 0 0 n n n ruditapes_c26190 1 1 0 0 n n n ruditapes_c26194 1 1 membrane protein 0 0 n n n ruditapes_c26197 1 1 0 0 n n n ruditapes_c26200 1 1 0 0 n n n ruditapes_c26229 1 1 0 0 n n n ruditapes_c26239 1 1 poly (adp-ribose) polymerase member 12 0 0 n n n ruditapes_c26244 1 1 0 0 n n n ruditapes_c26267 1 1 0 0 n n n ruditapes_c26277 1 1 0 0 n n n ruditapes_c26279 1 1 0 0 n n n ruditapes_c26284 1 1 0 0 n n n ruditapes_c26310 1 1 0 0 n n n ruditapes_c26329 1 1 0 0 n n n ruditapes_c26345 1 1 0 0 n n n ruditapes_c26351 1 1 cg33099 cg33099-pa 0 0 n n n ruditapes_c26353 1 1 PREDICTED: hypothetical protein [Homo sapiens] 0 0 n n n ruditapes_c26362 1 1 0 0 n n n ruditapes_c26363 1 1 0 0 n n n ruditapes_c26371 1 1 0 0 n n n ruditapes_c26377 1 1 0 0 n n n ruditapes_c26381 1 1 0 0 n n n ruditapes_c26410 1 1 0 0 n n n ruditapes_c26431 1 1 0 0 n n n ruditapes_c26436 1 1 0 0 n n n ruditapes_c26445 1 1 0 0 n n n ruditapes_c26456 1 1 0 0 n n n ruditapes_c26463 1 1 0 0 n n n ruditapes_c26475 1 1 0 0 n n n ruditapes_c26481 1 1 0 0 n n n ruditapes_c26483 1 1 0 0 n n n ruditapes_c26488 1 1 0 0 n n n ruditapes_c26492 1 1 0 0 n n n ruditapes_c26505 1 1 0 0 n n n ruditapes_c26509 1 1 0 0 n n n ruditapes_c26528 1 1 0 0 n n n ruditapes_c26529 1 1 0 0 n n n ruditapes_c26536 1 1 0 0 n n n ruditapes_c26543 1 1 transporter subunit: periplasmic-binding component of abc superfamily 0 0 n n n ruditapes_c26568 1 1 0 0 n n n ruditapes_c26569 1 1 0 0 n n n ruditapes_c26570 1 1 0 0 n n n ruditapes_c26576 1 1 0 0 n n n ruditapes_c26578 1 1 0 0 n n n ruditapes_c26587 1 1 0 0 n n n ruditapes_c26607 1 1 0 0 n n n ruditapes_c26615 1 1 udp-xylose and udp-n-acetylglucosamine transporter 0 0 n n n ruditapes_c26622 1 1 0 0 n n n ruditapes_c26635 1 1 chitin synthase 1 "/// 0002119 // nematode larval development /// 0040010 // positive regulation of growth rate /// 0007443 // Malpighian tubule morphogenesis /// 0035159 // regulation of tube length, open tracheal system /// 0016757 // transferase activity, transferring glycosyl groups /// 0001838 // embryonic epithelial tube formation /// 0006035 // cuticle chitin biosynthetic process /// 0040011 // locomotion /// 0035158 // regulation of tube diameter, open tracheal system /// 0010171 // body morphogenesis /// 0008362 // chitin-based embryonic cuticle biosynthetic process /// 0009792 // embryonic development ending in birth or egg hatching" 0 0 n n n ruditapes_c26641 1 1 0 0 n n n ruditapes_c26689 1 1 0 0 n n n ruditapes_c26690 1 1 0 0 n n n ruditapes_c26692 1 1 0 0 n n n ruditapes_c26709 1 1 0 0 n n n ruditapes_c26725 1 1 0 0 n n n ruditapes_c26731 1 1 0 0 n n n ruditapes_c26743 1 1 0 0 n n n ruditapes_c26744 1 1 0 0 n n n ruditapes_c26746 1 1 0 0 n n n ruditapes_c26751 1 1 0 0 n n n ruditapes_c2677 1 1 0 0 n n n ruditapes_c26773 1 1 0 0 n n n ruditapes_c26778 1 1 0 0 n n n ruditapes_c26798 1 1 0 0 n n n ruditapes_c26814 1 1 0 0 n n n ruditapes_c26819 1 1 0 0 n n n ruditapes_c26828 1 1 0 0 n n n ruditapes_c26835 1 1 0 0 n n n ruditapes_c26840 1 1 0 0 n n n ruditapes_c26842 1 1 0 0 n n n ruditapes_c26848 1 1 0 0 n n n ruditapes_c2685 1 1 0 0 n n n ruditapes_c26852 1 1 0 0 n n n ruditapes_c26869 1 1 0 0 n n n ruditapes_c26873 1 1 0 0 n n n ruditapes_c26878 1 1 0 0 n n n ruditapes_c26885 1 1 0 0 n n n ruditapes_c26893 1 1 0 0 n n n ruditapes_c26895 1 1 0 0 n n n ruditapes_c26901 1 1 0 0 n n n ruditapes_c26908 1 1 cd209 antigen-like protein d 0 0 n n n ruditapes_c26918 1 1 0 0 n n n ruditapes_c26921 1 1 0 0 n n n ruditapes_c26923 1 1 0 0 n n n ruditapes_c26924 1 1 0 0 n n n ruditapes_c26925 1 1 0 0 n n n ruditapes_c26927 1 1 0 0 n n n ruditapes_c26933 1 1 0 0 n n n ruditapes_c26934 1 1 0 0 n n n ruditapes_c26935 1 1 0 0 n n n ruditapes_c26974 1 1 0 0 n n n ruditapes_c26984 1 1 0 0 n n n ruditapes_c26987 1 1 0 0 n n n ruditapes_c26989 1 1 0 0 n n n ruditapes_c26992 1 1 0 0 n n n ruditapes_c26993 1 1 0 0 n n n ruditapes_c26998 1 1 0 0 n n n ruditapes_c27026 1 1 kainate binding protein precursor 0 0 n n n ruditapes_c27030 1 1 0 0 n n n ruditapes_c27052 1 1 0 0 n n n ruditapes_c27085 1 1 0 0 n n n ruditapes_c27108 1 1 0 0 n n n ruditapes_c27113 1 1 0 0 n n n ruditapes_c27114 1 1 0 0 n n n ruditapes_c27122 1 1 0 0 n n n ruditapes_c27144 1 1 0 0 n n n ruditapes_c27161 1 1 0 0 n n n ruditapes_c27165 1 1 0 0 n n n ruditapes_c2717 1 1 carbon-nitrogen family 0 0 n n n ruditapes_c27174 1 1 0 0 n n n ruditapes_c27185 1 1 0 0 n n n ruditapes_c27192 1 1 0 0 n n n ruditapes_c27196 1 1 0 0 n n n ruditapes_c27201 1 1 replication factor c subunit 2 /// 0005524 // ATP binding /// 0006271 // DNA strand elongation during DNA replication /// 0005634 // nucleus /// 0005663 // DNA replication factor C complex /// 0003689 // DNA clamp loader activity /// 0006281 // DNA repair /// 0004003 // ATP-dependent DNA helicase activity /// 0016321 // female meiosis chromosome segregation /// 0007076 // mitotic chromosome condensation 0 0 n n n ruditapes_c27209 1 1 0 0 n n n ruditapes_c27222 1 1 0 0 n n n ruditapes_c27230 1 1 0 0 n n n ruditapes_c27233 1 1 0 0 n n n ruditapes_c27236 1 1 0 0 n n n ruditapes_c27265 1 1 sarcoplasmic calcium binding protein 0 0 n n n ruditapes_c27278 1 1 0 0 n n n ruditapes_c27289 1 1 0 0 n n n ruditapes_c27291 1 1 0 0 n n n ruditapes_c27299 1 1 0 0 n n n ruditapes_c27312 1 1 0 0 n n n ruditapes_c27314 1 1 0 0 n n n ruditapes_c27326 1 1 0 0 n n n ruditapes_c27328 1 1 0 0 n n n ruditapes_c27332 1 1 0 0 n n n ruditapes_c27340 1 1 0 0 n n n ruditapes_c27343 1 1 0 0 n n n ruditapes_c27349 1 1 0 0 n n n ruditapes_c27366 1 1 0 0 n n n ruditapes_c27381 1 1 0 0 n n n ruditapes_c27387 1 1 0 0 n n n ruditapes_c27398 1 1 0 0 n n n ruditapes_c27404 1 1 0 0 n n n ruditapes_c27408 1 1 0 0 n n n ruditapes_c27430 1 1 0 0 n n n ruditapes_c27450 1 1 0 0 n n n ruditapes_c27466 1 1 0 0 n n n ruditapes_c27471 1 1 0 0 n n n ruditapes_c27477 1 1 0 0 n n n ruditapes_c27485 1 1 0 0 n n n ruditapes_c27502 1 1 0 0 n n n ruditapes_c27518 1 1 0 0 n n n ruditapes_c27520 1 1 0 0 n n n ruditapes_c27521 1 1 0 0 n n n ruditapes_c27523 1 1 0 0 n n n ruditapes_c27533 1 1 0 0 n n n ruditapes_c27552 1 1 eukaryotic translation initiation factor 4e binding protein 3 0 0 n n n ruditapes_c27556 1 1 type alpha 2 0 0 n n n ruditapes_c27566 1 1 0 0 n n n ruditapes_c27588 1 1 0 0 n n n ruditapes_c2759 1 1 defensin 0 0 n n n ruditapes_c27591 1 1 0 0 n n n ruditapes_c27608 1 1 0 0 n n n ruditapes_c27609 1 1 0 0 n n n ruditapes_c27615 1 1 0 0 n n n ruditapes_c27617 1 1 0 0 n n n ruditapes_c27628 1 1 0 0 n n n ruditapes_c27637 1 1 0 0 n n n ruditapes_c27646 1 1 0 0 n n n ruditapes_c27648 1 1 0 0 n n n ruditapes_c27656 1 1 0 0 n n n ruditapes_c27683 1 1 0 0 n n n ruditapes_c27691 1 1 0 0 n n n ruditapes_c27695 1 1 0 0 n n n ruditapes_c2770 1 1 0 0 n n n ruditapes_c27720 1 1 0 0 n n n ruditapes_c27738 1 1 isoform a 0 0 n n n ruditapes_c27744 1 1 0 0 n n n ruditapes_c27745 1 1 0 0 n n n ruditapes_c27747 1 1 0 0 n n n ruditapes_c27750 1 1 0 0 n n n ruditapes_c27755 1 1 0 0 n n n ruditapes_c27759 1 1 0 0 n n n ruditapes_c27770 1 1 0 0 n n n ruditapes_c27780 1 1 0 0 n n n ruditapes_c27807 1 1 c-type lectin 1 0 0 n n n ruditapes_c27825 1 1 0 0 n n n ruditapes_c27837 1 1 0 0 n n n ruditapes_c27846 1 1 0 0 n n n ruditapes_c27848 1 1 0 0 n n n ruditapes_c27889 1 1 0 0 n n n ruditapes_c27891 1 1 0 0 n n n ruditapes_c27901 1 1 0 0 n n n ruditapes_c27923 1 1 0 0 n n n ruditapes_c27930 1 1 0 0 n n n ruditapes_c27946 1 1 0 0 n n n ruditapes_c27960 1 1 0 0 n n n ruditapes_c27976 1 1 0 0 n n n ruditapes_c27978 1 1 0 0 n n n ruditapes_c27983 1 1 Hypothetical protein CBG01090 [Caenorhabditis briggsae AF16] 0 0 n n n ruditapes_c27989 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_c27994 1 1 0 0 n n n ruditapes_c27996 1 1 0 0 n n n ruditapes_c28005 1 1 0 0 n n n ruditapes_c28009 1 1 0 0 n n n ruditapes_c28010 1 1 0 0 n n n ruditapes_c28014 1 1 0 0 n n n ruditapes_c28030 1 1 0 0 n n n ruditapes_c28042 1 1 0 0 n n n ruditapes_c28052 1 1 0 0 n n n ruditapes_c28078 1 1 0 0 n n n ruditapes_c28082 1 1 0 0 n n n ruditapes_c28088 1 1 0 0 n n n ruditapes_c28105 1 1 0 0 n n n ruditapes_c28130 1 1 0 0 n n n ruditapes_c28132 1 1 0 0 n n n ruditapes_c28150 1 1 0 0 n n n ruditapes_c28157 1 1 0 0 n n n ruditapes_c28159 1 1 0 0 n n n ruditapes_c28171 1 1 0 0 n n n ruditapes_c28191 1 1 0 0 n n n ruditapes_c28198 1 1 0 0 n n n ruditapes_c28206 1 1 0 0 n n n ruditapes_c28208 1 1 0 0 n n n ruditapes_c28215 1 1 0 0 n n n ruditapes_c28218 1 1 0 0 n n n ruditapes_c28226 1 1 0 0 n n n ruditapes_c28227 1 1 0 0 n n n ruditapes_c28246 1 1 0 0 n n n ruditapes_c28248 1 1 0 0 n n n ruditapes_c28253 1 1 0 0 n n n ruditapes_c28302 1 1 0 0 n n n ruditapes_c28321 1 1 0 0 n n n ruditapes_c28340 1 1 0 0 n n n ruditapes_c28356 1 1 0 0 n n n ruditapes_c28380 1 1 0 0 n n n ruditapes_c28383 1 1 0 0 n n n ruditapes_c28399 1 1 0 0 n n n ruditapes_c28407 1 1 0 0 n n n ruditapes_c28427 1 1 0 0 n n n ruditapes_c28430 1 1 0 0 n n n ruditapes_c28431 1 1 0 0 n n n ruditapes_c28435 1 1 0 0 n n n ruditapes_c28438 1 1 0 0 n n n ruditapes_c28440 1 1 0 0 n n n ruditapes_c28457 1 1 0 0 n n n ruditapes_c28459 1 1 0 0 n n n ruditapes_c28472 1 1 0 0 n n n ruditapes_c28498 1 1 0 0 n n n ruditapes_c28513 1 1 0 0 n n n ruditapes_c28516 1 1 0 0 n n n ruditapes_c28519 1 1 0 0 n n n ruditapes_c28535 1 1 0 0 n n n ruditapes_c28537 1 1 0 0 n n n ruditapes_c28569 1 1 0 0 n n n ruditapes_c28570 1 1 0 0 n n n ruditapes_c28578 1 1 0 0 n n n ruditapes_c28592 1 1 0 0 n n n ruditapes_c28595 1 1 0 0 n n n ruditapes_c28603 1 1 0 0 n n n ruditapes_c28607 1 1 0 0 n n n ruditapes_c28608 1 1 0 0 n n n ruditapes_c28609 1 1 0 0 n n n ruditapes_c28615 1 1 0 0 n n n ruditapes_c28619 1 1 0 0 n n n ruditapes_c28621 1 1 0 0 n n n ruditapes_c28638 1 1 0 0 n n n ruditapes_c28657 1 1 0 0 n n n ruditapes_c28659 1 1 0 0 n n n ruditapes_c28666 1 1 0 0 n n n ruditapes_c28676 1 1 a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 15 0 0 n n n ruditapes_c28678 1 1 0 0 n n n ruditapes_c28708 1 1 0 0 n n n ruditapes_c28710 1 1 0 0 n n n ruditapes_c28727 1 1 0 0 n n n ruditapes_c28744 1 1 0 0 n n n ruditapes_c28760 1 1 0 0 n n n ruditapes_c28776 1 1 0 0 n n n ruditapes_c28784 1 1 0 0 n n n ruditapes_c28785 1 1 0 0 n n n ruditapes_c28796 1 1 0 0 n n n ruditapes_c28801 1 1 0 0 n n n ruditapes_c28805 1 1 0 0 n n n ruditapes_c28807 1 1 0 0 n n n ruditapes_c28809 1 1 0 0 n n n ruditapes_c28811 1 1 fibropellin partial 0 0 n n n ruditapes_c28836 1 1 0 0 n n n ruditapes_c28846 1 1 0 0 n n n ruditapes_c28853 1 1 0 0 n n n ruditapes_c28876 1 1 0 0 n n n ruditapes_c28886 1 1 0 0 n n n ruditapes_c28923 1 1 0 0 n n n ruditapes_c28926 1 1 0 0 n n n ruditapes_c28934 1 1 0 0 n n n ruditapes_c28940 1 1 0 0 n n n ruditapes_c28944 1 1 0 0 n n n ruditapes_c28956 1 1 0 0 n n n ruditapes_c28957 1 1 0 0 n n n ruditapes_c28980 1 1 primary mesenchyme specific protein msp130-related-2 0 0 n n n ruditapes_c28989 1 1 0 0 n n n ruditapes_c29037 1 1 0 0 n n n ruditapes_c29040 1 1 0 0 n n n ruditapes_c29044 1 1 0 0 n n n ruditapes_c29056 1 1 0 0 n n n ruditapes_c29080 1 1 nlgn4 isoform 3 0 0 n n n ruditapes_c29103 1 1 0 0 n n n ruditapes_c29105 1 1 0 0 n n n ruditapes_c29108 1 1 0 0 n n n ruditapes_c29123 1 1 0 0 n n n ruditapes_c29128 1 1 0 0 n n n ruditapes_c29136 1 1 0 0 n n n ruditapes_c29138 1 1 0 0 n n n ruditapes_c29154 1 1 0 0 n n n ruditapes_c29156 1 1 0 0 n n n ruditapes_c29157 1 1 0 0 n n n ruditapes_c29171 1 1 0 0 n n n ruditapes_c29178 1 1 0 0 n n n ruditapes_c29180 1 1 0 0 n n n ruditapes_c29186 1 1 0 0 n n n ruditapes_c29191 1 1 0 0 n n n ruditapes_c29202 1 1 0 0 n n n ruditapes_c29203 1 1 0 0 n n n ruditapes_c29217 1 1 0 0 n n n ruditapes_c29232 1 1 0 0 n n n ruditapes_c29240 1 1 0 0 n n n ruditapes_c29247 1 1 0 0 n n n ruditapes_c29258 1 1 0 0 n n n ruditapes_c29294 1 1 0 0 n n n ruditapes_c2930 1 1 0 0 n n n ruditapes_c29304 1 1 0 0 n n n ruditapes_c29305 1 1 0 0 n n n ruditapes_c29306 1 1 0 0 n n n ruditapes_c29310 1 1 0 0 n n n ruditapes_c29315 1 1 0 0 n n n ruditapes_c29327 1 1 0 0 n n n ruditapes_c29363 1 1 karyopherin beta 0 0 n n n ruditapes_c29364 1 1 0 0 n n n ruditapes_c29367 1 1 0 0 n n n ruditapes_c29377 1 1 0 0 n n n ruditapes_c29415 1 1 0 0 n n n ruditapes_c29418 1 1 0 0 n n n ruditapes_c29419 1 1 0 0 n n n ruditapes_c29423 1 1 0 0 n n n ruditapes_c29424 1 1 0 0 n n n ruditapes_c29433 1 1 0 0 n n n ruditapes_c29445 1 1 0 0 n n n ruditapes_c29453 1 1 0 0 n n n ruditapes_c29464 1 1 sialic acid binding lectin 0 0 n n n ruditapes_c29474 1 1 0 0 n n n ruditapes_c29483 1 1 0 0 n n n ruditapes_c29494 1 1 0 0 n n n ruditapes_c29497 1 1 0 0 n n n ruditapes_c29499 1 1 0 0 n n n ruditapes_c29506 1 1 0 0 n n n ruditapes_c29513 1 1 0 0 n n n ruditapes_c29514 1 1 0 0 n n n ruditapes_c29519 1 1 0 0 n n n ruditapes_c29531 1 1 0 0 n n n ruditapes_c29532 1 1 0 0 n n n ruditapes_c29537 1 1 0 0 n n n ruditapes_c29538 1 1 0 0 n n n ruditapes_c29539 1 1 0 0 n n n ruditapes_c29553 1 1 0 0 n n n ruditapes_c29556 1 1 0 0 n n n ruditapes_c2956 1 1 calmodulin 0 0 n n n ruditapes_c29569 1 1 0 0 n n n ruditapes_c2958 1 1 0 0 n n n ruditapes_c29585 1 1 0 0 n n n ruditapes_c29589 1 1 0 0 n n n ruditapes_c29607 1 1 0 0 n n n ruditapes_c2961 1 1 0 0 n n n ruditapes_c29613 1 1 0 0 n n n ruditapes_c29624 1 1 0 0 n n n ruditapes_c29625 1 1 0 0 n n n ruditapes_c29647 1 1 0 0 n n n ruditapes_c29651 1 1 0 0 n n n ruditapes_c29660 1 1 0 0 n n n ruditapes_c29661 1 1 0 0 n n n ruditapes_c29663 1 1 0 0 n n n ruditapes_c29668 1 1 0 0 n n n ruditapes_c29670 1 1 0 0 n n n ruditapes_c29671 1 1 0 0 n n n ruditapes_c29685 1 1 0 0 n n n ruditapes_c29695 1 1 0 0 n n n ruditapes_c29698 1 1 0 0 n n n ruditapes_c29712 1 1 0 0 n n n ruditapes_c29718 1 1 0 0 n n n ruditapes_c29723 1 1 myc homolog 0 0 n n n ruditapes_c29728 1 1 0 0 n n n ruditapes_c29729 1 1 0 0 n n n ruditapes_c29741 1 1 0 0 n n n ruditapes_c29746 1 1 0 0 n n n ruditapes_c29749 1 1 0 0 n n n ruditapes_c29751 1 1 0 0 n n n ruditapes_c29783 1 1 0 0 n n n ruditapes_c29791 1 1 0 0 n n n ruditapes_c29801 1 1 0 0 n n n ruditapes_c29807 1 1 0 0 n n n ruditapes_c29816 1 1 0 0 n n n ruditapes_c29822 1 1 0 0 n n n ruditapes_c29826 1 1 0 0 n n n ruditapes_c29834 1 1 0 0 n n n ruditapes_c29840 1 1 0 0 n n n ruditapes_c29849 1 1 0 0 n n n ruditapes_c29851 1 1 0 0 n n n ruditapes_c29852 1 1 gpi mannosyltransferase i 0 0 n n n ruditapes_c29856 1 1 0 0 n n n ruditapes_c29867 1 1 0 0 n n n ruditapes_c29875 1 1 0 0 n n n ruditapes_c29884 1 1 0 0 n n n ruditapes_c29890 1 1 0 0 n n n ruditapes_c29893 1 1 0 0 n n n ruditapes_c29894 1 1 0 0 n n n ruditapes_c299 1 1 GG18875 [Drosophila erecta] 0 0 n n n ruditapes_c2991 1 1 0 0 n n n ruditapes_c29911 1 1 0 0 n n n ruditapes_c29914 1 1 0 0 n n n ruditapes_c29922 1 1 0 0 n n n ruditapes_c29924 1 1 0 0 n n n ruditapes_c29926 1 1 0 0 n n n ruditapes_c29927 1 1 0 0 n n n ruditapes_c29928 1 1 0 0 n n n ruditapes_c29933 1 1 0 0 n n n ruditapes_c29947 1 1 0 0 n n n ruditapes_c29952 1 1 0 0 n n n ruditapes_c29953 1 1 0 0 n n n ruditapes_c29959 1 1 0 0 n n n ruditapes_c29973 1 1 0 0 n n n ruditapes_c29985 1 1 0 0 n n n ruditapes_c30010 1 1 agmatinase 0 0 n n n ruditapes_c30014 1 1 0 0 n n n ruditapes_c30017 1 1 serine protease inhibitor dipetalogastin 0 0 n n n ruditapes_c30020 1 1 0 0 n n n ruditapes_c30028 1 1 0 0 n n n ruditapes_c30033 1 1 0 0 n n n ruditapes_c3004 1 1 0 0 n n n ruditapes_c30040 1 1 0 0 n n n ruditapes_c30056 1 1 0 0 n n n ruditapes_c30058 1 1 0 0 n n n ruditapes_c30067 1 1 0 0 n n n ruditapes_c30071 1 1 0 0 n n n ruditapes_c30075 1 1 0 0 n n n ruditapes_c30089 1 1 0 0 n n n ruditapes_c30092 1 1 0 0 n n n ruditapes_c30107 1 1 0 0 n n n ruditapes_c30112 1 1 0 0 n n n ruditapes_c30116 1 1 0 0 n n n ruditapes_c30125 1 1 0 0 n n n ruditapes_c30128 1 1 0 0 n n n ruditapes_c30141 1 1 0 0 n n n ruditapes_c30143 1 1 0 0 n n n ruditapes_c30165 1 1 0 0 n n n ruditapes_c30203 1 1 0 0 n n n ruditapes_c30204 1 1 0 0 n n n ruditapes_c30215 1 1 0 0 n n n ruditapes_c30218 1 1 0 0 n n n ruditapes_c30220 1 1 0 0 n n n ruditapes_c30221 1 1 0 0 n n n ruditapes_c30235 1 1 0 0 n n n ruditapes_c30236 1 1 0 0 n n n ruditapes_c30245 1 1 cholinergic muscarinic 3 /// 0008144 // drug binding /// 0019229 // regulation of vasoconstriction /// 0007213 // muscarinic acetylcholine receptor signaling pathway /// 0008283 // cell proliferation /// 0007399 // nervous system development /// 0004435 // phosphoinositide phospholipase C activity /// 0004981 // muscarinic acetylcholine receptor activity /// 0043679 // nerve terminal /// 0032279 // asymmetric synapse /// 0045987 // positive regulation of smooth muscle contraction /// 0005887 // integral to plasma membrane /// 0007586 // digestion /// 0006464 // protein modification process /// 0030425 // dendrite 0 0 n n n ruditapes_c30247 1 1 0 0 n n n ruditapes_c30253 1 1 0 0 n n n ruditapes_c30261 1 1 0 0 n n n ruditapes_c30268 1 1 0 0 n n n ruditapes_c30279 1 1 0 0 n n n ruditapes_c30286 1 1 0 0 n n n ruditapes_c30299 1 1 0 0 n n n ruditapes_c30301 1 1 0 0 n n n ruditapes_c30308 1 1 0 0 n n n ruditapes_c30325 1 1 0 0 n n n ruditapes_c30326 1 1 ribosomal-protein-s5-alanine n-acetyltransferase 0 0 n n n ruditapes_c30332 1 1 0 0 n n n ruditapes_c30333 1 1 0 0 n n n ruditapes_c30359 1 1 0 0 n n n ruditapes_c30366 1 1 0 0 n n n ruditapes_c3037 1 1 0 0 n n n ruditapes_c30384 1 1 0 0 n n n ruditapes_c30387 1 1 0 0 n n n ruditapes_c30390 1 1 0 0 n n n ruditapes_c30392 1 1 0 0 n n n ruditapes_c30393 1 1 0 0 n n n ruditapes_c30396 1 1 0 0 n n n ruditapes_c30406 1 1 0 0 n n n ruditapes_c30415 1 1 0 0 n n n ruditapes_c30428 1 1 0 0 n n n ruditapes_c30431 1 1 0 0 n n n ruditapes_c30449 1 1 0 0 n n n ruditapes_c30450 1 1 0 0 n n n ruditapes_c30451 1 1 0 0 n n n ruditapes_c30453 1 1 0 0 n n n ruditapes_c30454 1 1 0 0 n n n ruditapes_c30459 1 1 0 0 n n n ruditapes_c30463 1 1 0 0 n n n ruditapes_c30472 1 1 0 0 n n n ruditapes_c30474 1 1 0 0 n n n ruditapes_c30475 1 1 0 0 n n n ruditapes_c30476 1 1 0 0 n n n ruditapes_c30491 1 1 0 0 n n n ruditapes_c30502 1 1 0 0 n n n ruditapes_c30507 1 1 0 0 n n n ruditapes_c30513 1 1 0 0 n n n ruditapes_c30523 1 1 0 0 n n n ruditapes_c30526 1 1 0 0 n n n ruditapes_c30527 1 1 0 0 n n n ruditapes_c3053 1 1 protein 0 0 n n n ruditapes_c30534 1 1 0 0 n n n ruditapes_c30535 1 1 0 0 n n n ruditapes_c30559 1 1 0 0 n n n ruditapes_c3056 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c30560 1 1 0 0 n n n ruditapes_c30565 1 1 0 0 n n n ruditapes_c30566 1 1 0 0 n n n ruditapes_c30573 1 1 0 0 n n n ruditapes_c30579 1 1 0 0 n n n ruditapes_c30589 1 1 0 0 n n n ruditapes_c30601 1 1 0 0 n n n ruditapes_c30602 1 1 0 0 n n n ruditapes_c30621 1 1 0 0 n n n ruditapes_c30623 1 1 0 0 n n n ruditapes_c30624 1 1 0 0 n n n ruditapes_c30626 1 1 0 0 n n n ruditapes_c30628 1 1 0 0 n n n ruditapes_c30635 1 1 0 0 n n n ruditapes_c30636 1 1 0 0 n n n ruditapes_c30643 1 1 0 0 n n n ruditapes_c30653 1 1 0 0 n n n ruditapes_c30655 1 1 0 0 n n n ruditapes_c30673 1 1 0 0 n n n ruditapes_c30676 1 1 carbohydrate sulfotransferase 11 /// 0007585 // respiratory gaseous exchange /// 0043066 // negative regulation of apoptosis /// 0008146 // sulfotransferase activity /// 0042127 // regulation of cell proliferation /// 0002063 // chondrocyte development /// 0048589 // developmental growth /// 0030206 // chondroitin sulfate biosynthetic process /// 0035121 // tail morphogenesis /// 0009791 // post-embryonic development /// 0030512 // negative regulation of transforming growth factor beta receptor signaling pathway /// 0048703 // embryonic viscerocranium morphogenesis /// 0033037 // polysaccharide localization /// 0042733 // embryonic digit morphogenesis 0 0 n n n ruditapes_c30677 1 1 0 0 n n n ruditapes_c30679 1 1 0 0 n n n ruditapes_c30684 1 1 0 0 n n n ruditapes_c30686 1 1 0 0 n n n ruditapes_c30687 1 1 0 0 n n n ruditapes_c30700 1 1 0 0 n n n ruditapes_c30703 1 1 0 0 n n n ruditapes_c30707 1 1 0 0 n n n ruditapes_c30712 1 1 0 0 n n n ruditapes_c30717 1 1 0 0 n n n ruditapes_c30720 1 1 0 0 n n n ruditapes_c30732 1 1 0 0 n n n ruditapes_c30748 1 1 0 0 n n n ruditapes_c30756 1 1 0 0 n n n ruditapes_c30764 1 1 0 0 n n n ruditapes_c30781 1 1 0 0 n n n ruditapes_c30787 1 1 0 0 n n n ruditapes_c30789 1 1 0 0 n n n ruditapes_c30807 1 1 0 0 n n n ruditapes_c30825 1 1 0 0 n n n ruditapes_c30839 1 1 0 0 n n n ruditapes_c30847 1 1 0 0 n n n ruditapes_c30854 1 1 0 0 n n n ruditapes_c30859 1 1 0 0 n n n ruditapes_c30866 1 1 0 0 n n n ruditapes_c30867 1 1 0 0 n n n ruditapes_c30875 1 1 0 0 n n n ruditapes_c30877 1 1 0 0 n n n ruditapes_c30882 1 1 0 0 n n n ruditapes_c30889 1 1 0 0 n n n ruditapes_c30892 1 1 0 0 n n n ruditapes_c30893 1 1 0 0 n n n ruditapes_c30907 1 1 0 0 n n n ruditapes_c30908 1 1 0 0 n n n ruditapes_c30911 1 1 0 0 n n n ruditapes_c30915 1 1 0 0 n n n ruditapes_c30917 1 1 0 0 n n n ruditapes_c30918 1 1 0 0 n n n ruditapes_c30926 1 1 0 0 n n n ruditapes_c30937 1 1 0 0 n n n ruditapes_c3094 1 1 0 0 n n n ruditapes_c30947 1 1 0 0 n n n ruditapes_c30950 1 1 0 0 n n n ruditapes_c30959 1 1 0 0 n n n ruditapes_c30960 1 1 0 0 n n n ruditapes_c30966 1 1 0 0 n n n ruditapes_c30976 1 1 0 0 n n n ruditapes_c30983 1 1 0 0 n n n ruditapes_c30995 1 1 0 0 n n n ruditapes_c31000 1 1 0 0 n n n ruditapes_c31013 1 1 0 0 n n n ruditapes_c31022 1 1 0 0 n n n ruditapes_c31025 1 1 0 0 n n n ruditapes_c31029 1 1 0 0 n n n ruditapes_c31042 1 1 0 0 n n n ruditapes_c31043 1 1 0 0 n n n ruditapes_c31044 1 1 0 0 n n n ruditapes_c31061 1 1 0 0 n n n ruditapes_c31069 1 1 0 0 n n n ruditapes_c31076 1 1 tenascin r ( janusin) /// 0009987 // cellular process 0 0 n n n ruditapes_c31078 1 1 0 0 n n n ruditapes_c31093 1 1 0 0 n n n ruditapes_c31104 1 1 0 0 n n n ruditapes_c31109 1 1 0 0 n n n ruditapes_c31120 1 1 0 0 n n n ruditapes_c31128 1 1 0 0 n n n ruditapes_c31143 1 1 0 0 n n n ruditapes_c31153 1 1 0 0 n n n ruditapes_c31154 1 1 0 0 n n n ruditapes_c31156 1 1 0 0 n n n ruditapes_c31162 1 1 0 0 n n n ruditapes_c31163 1 1 0 0 n n n ruditapes_c31177 1 1 0 0 n n n ruditapes_c31184 1 1 0 0 n n n ruditapes_c31185 1 1 0 0 n n n ruditapes_c31189 1 1 0 0 n n n ruditapes_c31201 1 1 0 0 n n n ruditapes_c31211 1 1 0 0 n n n ruditapes_c31212 1 1 0 0 n n n ruditapes_c31221 1 1 0 0 n n n ruditapes_c31222 1 1 0 0 n n n ruditapes_c31234 1 1 0 0 n n n ruditapes_c31243 1 1 0 0 n n n ruditapes_c31246 1 1 0 0 n n n ruditapes_c31259 1 1 0 0 n n n ruditapes_c31262 1 1 0 0 n n n ruditapes_c31265 1 1 0 0 n n n ruditapes_c31266 1 1 0 0 n n n ruditapes_c31269 1 1 0 0 n n n ruditapes_c31282 1 1 0 0 n n n ruditapes_c31289 1 1 0 0 n n n ruditapes_c31294 1 1 0 0 n n n ruditapes_c31303 1 1 0 0 n n n ruditapes_c31307 1 1 0 0 n n n ruditapes_c31311 1 1 0 0 n n n ruditapes_c31312 1 1 0 0 n n n ruditapes_c31318 1 1 0 0 n n n ruditapes_c31335 1 1 0 0 n n n ruditapes_c31340 1 1 0 0 n n n ruditapes_c31344 1 1 0 0 n n n ruditapes_c31349 1 1 0 0 n n n ruditapes_c31365 1 1 0 0 n n n ruditapes_c31368 1 1 0 0 n n n ruditapes_c31373 1 1 0 0 n n n ruditapes_c31378 1 1 0 0 n n n ruditapes_c31386 1 1 0 0 n n n ruditapes_c31397 1 1 0 0 n n n ruditapes_c31399 1 1 0 0 n n n ruditapes_c31401 1 1 0 0 n n n ruditapes_c31403 1 1 0 0 n n n ruditapes_c31412 1 1 0 0 n n n ruditapes_c31417 1 1 0 0 n n n ruditapes_c31420 1 1 0 0 n n n ruditapes_c31427 1 1 0 0 n n n ruditapes_c31428 1 1 0 0 n n n ruditapes_c31430 1 1 0 0 n n n ruditapes_c31432 1 1 0 0 n n n ruditapes_c31434 1 1 ep protein precursor 0 0 n n n ruditapes_c31445 1 1 0 0 n n n ruditapes_c31448 1 1 0 0 n n n ruditapes_c31449 1 1 0 0 n n n ruditapes_c31450 1 1 0 0 n n n ruditapes_c31455 1 1 0 0 n n n ruditapes_c31457 1 1 0 0 n n n ruditapes_c31471 1 1 0 0 n n n ruditapes_c31472 1 1 0 0 n n n ruditapes_c31474 1 1 0 0 n n n ruditapes_c31475 1 1 0 0 n n n ruditapes_c31476 1 1 0 0 n n n ruditapes_c31478 1 1 0 0 n n n ruditapes_c31481 1 1 0 0 n n n ruditapes_c31482 1 1 0 0 n n n ruditapes_c31485 1 1 0 0 n n n ruditapes_c31486 1 1 0 0 n n n ruditapes_c31493 1 1 0 0 n n n ruditapes_c31496 1 1 0 0 n n n ruditapes_c31500 1 1 0 0 n n n ruditapes_c31514 1 1 0 0 n n n ruditapes_c31518 1 1 0 0 n n n ruditapes_c31520 1 1 0 0 n n n ruditapes_c31530 1 1 0 0 n n n ruditapes_c31538 1 1 0 0 n n n ruditapes_c31539 1 1 0 0 n n n ruditapes_c31541 1 1 0 0 n n n ruditapes_c31543 1 1 0 0 n n n ruditapes_c31544 1 1 0 0 n n n ruditapes_c31556 1 1 0 0 n n n ruditapes_c31558 1 1 0 0 n n n ruditapes_c31560 1 1 0 0 n n n ruditapes_c31561 1 1 0 0 n n n ruditapes_c31572 1 1 0 0 n n n ruditapes_c31589 1 1 0 0 n n n ruditapes_c31592 1 1 0 0 n n n ruditapes_c31593 1 1 0 0 n n n ruditapes_c31596 1 1 0 0 n n n ruditapes_c31599 1 1 0 0 n n n ruditapes_c316 1 1 0 0 n n n ruditapes_c31604 1 1 0 0 n n n ruditapes_c31615 1 1 0 0 n n n ruditapes_c31616 1 1 0 0 n n n ruditapes_c31619 1 1 0 0 n n n ruditapes_c31632 1 1 0 0 n n n ruditapes_c31639 1 1 0 0 n n n ruditapes_c31641 1 1 0 0 n n n ruditapes_c31642 1 1 0 0 n n n ruditapes_c31648 1 1 0 0 n n n ruditapes_c31650 1 1 0 0 n n n ruditapes_c31651 1 1 0 0 n n n ruditapes_c31656 1 1 0 0 n n n ruditapes_c31658 1 1 0 0 n n n ruditapes_c31659 1 1 0 0 n n n ruditapes_c31663 1 1 0 0 n n n ruditapes_c31667 1 1 0 0 n n n ruditapes_c31669 1 1 0 0 n n n ruditapes_c31672 1 1 0 0 n n n ruditapes_c31677 1 1 0 0 n n n ruditapes_c31684 1 1 0 0 n n n ruditapes_c31686 1 1 0 0 n n n ruditapes_c31689 1 1 0 0 n n n ruditapes_c31691 1 1 0 0 n n n ruditapes_c31692 1 1 0 0 n n n ruditapes_c31693 1 1 0 0 n n n ruditapes_c31694 1 1 0 0 n n n ruditapes_c31695 1 1 0 0 n n n ruditapes_c31709 1 1 0 0 n n n ruditapes_c31712 1 1 0 0 n n n ruditapes_c31719 1 1 0 0 n n n ruditapes_c31723 1 1 0 0 n n n ruditapes_c31732 1 1 0 0 n n n ruditapes_c31737 1 1 0 0 n n n ruditapes_c31741 1 1 0 0 n n n ruditapes_c31744 1 1 0 0 n n n ruditapes_c31745 1 1 0 0 n n n ruditapes_c31747 1 1 0 0 n n n ruditapes_c31752 1 1 0 0 n n n ruditapes_c31758 1 1 0 0 n n n ruditapes_c31762 1 1 0 0 n n n ruditapes_c31765 1 1 0 0 n n n ruditapes_c31771 1 1 0 0 n n n ruditapes_c31772 1 1 0 0 n n n ruditapes_c31773 1 1 0 0 n n n ruditapes_c31774 1 1 0 0 n n n ruditapes_c31776 1 1 0 0 n n n ruditapes_c31779 1 1 0 0 n n n ruditapes_c31793 1 1 0 0 n n n ruditapes_c31795 1 1 0 0 n n n ruditapes_c31803 1 1 0 0 n n n ruditapes_c31805 1 1 0 0 n n n ruditapes_c31806 1 1 0 0 n n n ruditapes_c31807 1 1 0 0 n n n ruditapes_c31812 1 1 0 0 n n n ruditapes_c31813 1 1 0 0 n n n ruditapes_c31819 1 1 0 0 n n n ruditapes_c31824 1 1 tenascin n /// 0007409 // axonogenesis /// 0007160 // cell-matrix adhesion /// 0005634 // nucleus /// 0042802 // identical protein binding /// 0005886 // plasma membrane /// 0005737 // cytoplasm /// 0009986 // cell surface /// 0005578 // proteinaceous extracellular matrix /// 0030308 // negative regulation of cell growth /// 0016477 // cell migration 0 0 n n n ruditapes_c31827 1 1 0 0 n n n ruditapes_c31833 1 1 0 0 n n n ruditapes_c31834 1 1 0 0 n n n ruditapes_c31835 1 1 0 0 n n n ruditapes_c31837 1 1 0 0 n n n ruditapes_c31849 1 1 0 0 n n n ruditapes_c31850 1 1 0 0 n n n ruditapes_c31851 1 1 0 0 n n n ruditapes_c31859 1 1 0 0 n n n ruditapes_c31861 1 1 0 0 n n n ruditapes_c31865 1 1 0 0 n n n ruditapes_c31870 1 1 0 0 n n n ruditapes_c31872 1 1 0 0 n n n ruditapes_c31874 1 1 0 0 n n n ruditapes_c31875 1 1 0 0 n n n ruditapes_c31876 1 1 0 0 n n n ruditapes_c31878 1 1 0 0 n n n ruditapes_c31881 1 1 0 0 n n n ruditapes_c31885 1 1 0 0 n n n ruditapes_c31886 1 1 0 0 n n n ruditapes_c31894 1 1 0 0 n n n ruditapes_c31898 1 1 0 0 n n n ruditapes_c31904 1 1 0 0 n n n ruditapes_c31908 1 1 0 0 n n n ruditapes_c31914 1 1 0 0 n n n ruditapes_c31915 1 1 0 0 n n n ruditapes_c31918 1 1 0 0 n n n ruditapes_c31921 1 1 0 0 n n n ruditapes_c31928 1 1 0 0 n n n ruditapes_c31929 1 1 0 0 n n n ruditapes_c3193 1 1 tolloid-like 2 0 0 n n n ruditapes_c31931 1 1 0 0 n n n ruditapes_c31933 1 1 0 0 n n n ruditapes_c31939 1 1 0 0 n n n ruditapes_c31941 1 1 0 0 n n n ruditapes_c31946 1 1 0 0 n n n ruditapes_c31949 1 1 0 0 n n n ruditapes_c31953 1 1 0 0 n n n ruditapes_c31955 1 1 0 0 n n n ruditapes_c31961 1 1 0 0 n n n ruditapes_c31967 1 1 0 0 n n n ruditapes_c31970 1 1 0 0 n n n ruditapes_c31973 1 1 0 0 n n n ruditapes_c31974 1 1 0 0 n n n ruditapes_c31975 1 1 0 0 n n n ruditapes_c31976 1 1 0 0 n n n ruditapes_c31979 1 1 0 0 n n n ruditapes_c31980 1 1 0 0 n n n ruditapes_c31983 1 1 0 0 n n n ruditapes_c31985 1 1 0 0 n n n ruditapes_c31986 1 1 0 0 n n n ruditapes_c31988 1 1 0 0 n n n ruditapes_c31991 1 1 0 0 n n n ruditapes_c31992 1 1 0 0 n n n ruditapes_c32000 1 1 0 0 n n n ruditapes_c32002 1 1 0 0 n n n ruditapes_c32005 1 1 0 0 n n n ruditapes_c32009 1 1 0 0 n n n ruditapes_c32018 1 1 0 0 n n n ruditapes_c32022 1 1 0 0 n n n ruditapes_c32025 1 1 0 0 n n n ruditapes_c32030 1 1 0 0 n n n ruditapes_c32034 1 1 0 0 n n n ruditapes_c32043 1 1 0 0 n n n ruditapes_c32064 1 1 0 0 n n n ruditapes_c32067 1 1 0 0 n n n ruditapes_c32072 1 1 0 0 n n n ruditapes_c321 1 1 0 0 n n n ruditapes_c3210 1 1 0 0 n n n ruditapes_c3235 1 1 0 0 n n n ruditapes_c32373 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes_c32524 1 1 0 0 n n n ruditapes_c32553 1 1 beta- precursor 0 0 n n n ruditapes_c32641 1 1 lysozyme "/// 0042742 // defense response to bacterium /// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0032502 // developmental process" 0 0 n n n ruditapes_c3268 1 1 0 0 n n n ruditapes_c32787 1 1 0 0 n n n ruditapes_c32928 1 1 cu zn superoxide dismutase 0 0 n n n ruditapes_c32933 1 1 0 0 n n n ruditapes_c330 1 1 0 0 n n n ruditapes_c33083 1 1 peptidoglycan recognition protein /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_c3311 1 1 zygote arrest 1 0 0 n n n ruditapes_c3322 1 1 0 0 n n n ruditapes_c3330 1 1 0 0 n n n ruditapes_c3341 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_c33415 1 1 countin-like protein 0 0 n n n ruditapes_c3343 1 1 s-layer domain-containing protein 0 0 n n n ruditapes_c33617 1 1 0 0 n n n ruditapes_c33634 1 1 0 0 n n n ruditapes_c33744 1 1 0 0 n n n ruditapes_c3383 1 1 0 0 n n n ruditapes_c3405 1 1 0 0 n n n ruditapes_c3428 1 1 0 0 n n n ruditapes_c343 1 1 0 0 n n n ruditapes_c34327 1 1 0 0 n n n ruditapes_c3436 1 1 0 0 n n n ruditapes_c34684 1 1 protein 0 0 n n n ruditapes_c3498 1 1 0 0 n n n ruditapes_c3500 1 1 protease inhibitor 0 0 n n n ruditapes_c35133 1 1 lysozyme "/// 0042742 // defense response to bacterium /// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0009792 // embryonic development ending in birth or egg hatching" 0 0 n n n ruditapes_c35139 1 1 0 0 n n n ruditapes_c35243 1 1 cathepsin l /// 0008234 // cysteine-type peptidase activity 0 0 n n n ruditapes_c35297 1 1 cathepsin s precursor /// 0006508 // proteolysis /// 0004197 // cysteine-type endopeptidase activity 0 0 n n n ruditapes_c35302 1 1 0 0 n n n ruditapes_c35335 1 1 0 0 n n n ruditapes_c3564 1 1 0 0 n n n ruditapes_c3584 1 1 cg3603-pa /// 0005488 // binding /// 0016491 // oxidoreductase activity /// 0016021 // integral to membrane /// 0008152 // metabolic process /// 0007186 // G-protein coupled receptor protein signaling pathway 0 0 n n n ruditapes_c3588 1 1 protein /// 0005622 // intracellular 0 0 n n n ruditapes_c359 1 1 0 0 n n n ruditapes_c3594 1 1 0 0 n n n ruditapes_c35994 1 1 0 0 n n n ruditapes_c36001 1 1 0 0 n n n ruditapes_c3608 1 1 0 0 n n n ruditapes_c3628 1 1 0 0 n n n ruditapes_c36388 1 1 0 0 n n n ruditapes_c3640 1 1 0 0 n n n ruditapes_c3642 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_c36437 1 1 0 0 n n n ruditapes_c36468 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c36757 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c3691 1 1 0 0 n n n ruditapes_c36911 1 1 cornifelin homolog a 0 0 n n n ruditapes_c36958 1 1 peptidoglycan recognition protein l 0 0 n n n ruditapes_c37058 1 1 0 0 n n n ruditapes_c37145 1 1 0 0 n n n ruditapes_c3722 1 1 0 0 n n n ruditapes_c3739 1 1 0 0 n n n ruditapes_c3741 1 1 0 0 n n n ruditapes_c3753 1 1 0 0 n n n ruditapes_c3761 1 1 0 0 n n n ruditapes_c3774 1 1 0 0 n n n ruditapes_c37920 1 1 0 0 n n n ruditapes_c3802 1 1 glutathione s-transferase 0 0 n n n ruditapes_c38098 1 1 0 0 n n n ruditapes_c3816 1 1 macrophage galactose n-acetyl-galactosamine specific lectin 1 0 0 n n n ruditapes_c38168 1 1 0 0 n n n ruditapes_c382 1 1 defensin 0 0 n n n ruditapes_c38376 1 1 matrilin 3 precursor 0 0 n n n ruditapes_c38395 1 1 0 0 n n n ruditapes_c38491 1 1 protein 0 0 n n n ruditapes_c38618 1 1 0 0 n n n ruditapes_c38622 1 1 0 0 n n n ruditapes_c38917 1 1 0 0 n n n ruditapes_c3918 1 1 0 0 n n n ruditapes_c39367 1 1 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0 n n n ruditapes_c3939 1 1 0 0 n n n ruditapes_c3979 1 1 secreted protein with signal peptide and 12 kazal repeats and a mucin-like stretch of threonines 0 0 n n n ruditapes_c4030 1 1 0 0 n n n ruditapes_c4052 1 1 0 0 n n n ruditapes_c4055 1 1 0 0 n n n ruditapes_c4093 1 1 0 0 n n n ruditapes_c4098 1 1 0 0 n n n ruditapes_c4147 1 1 0 0 n n n ruditapes_c4227 1 1 0 0 n n n ruditapes_c4248 1 1 protease inhibitor 0 0 n n n ruditapes_c4316 1 1 0 0 n n n ruditapes_c4332 1 1 antimicrobial peptide hydramacin 0 0 n n n ruditapes_c4333 1 1 ncan protein 0 0 n n n ruditapes_c436 1 1 0 0 n n n ruditapes_c4369 1 1 0 0 n n n ruditapes_c4512 1 1 0 0 n n n ruditapes_c4519 1 1 0 0 n n n ruditapes_c4560 1 1 0 0 n n n ruditapes_c4566 1 1 wsc domain-containing protein 0 0 n n n ruditapes_c4575 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes_c4595 1 1 0 0 n n n ruditapes_c4597 1 1 carbon-nitrogen family /// 0003824 // catalytic activity 0 0 n n n ruditapes_c4629 1 1 protein 0 0 n n n ruditapes_c4634 1 1 0 0 n n n ruditapes_c4671 1 1 ncan protein 0 0 n n n ruditapes_c4693 1 1 0 0 n n n ruditapes_c4724 1 1 0 0 n n n ruditapes_c4781 1 1 0 0 n n n ruditapes_c4791 1 1 0 0 n n n ruditapes_c481 1 1 0 0 n n n ruditapes_c4832 1 1 c-type lectin 0 0 n n n ruditapes_c4936 1 1 0 0 n n n ruditapes_c4966 1 1 0 0 n n n ruditapes_c4973 1 1 whey acidic protein precursor /// 0004857 // enzyme inhibitor activity 0 0 n n n ruditapes_c4999 1 1 0 0 n n n ruditapes_c5029 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes_c5042 1 1 0 0 n n n ruditapes_c5095 1 1 0 0 n n n ruditapes_c5098 1 1 0 0 n n n ruditapes_c5102 1 1 0 0 n n n ruditapes_c5132 1 1 0 0 n n n ruditapes_c5136 1 1 0 0 n n n ruditapes_c5152 1 1 0 0 n n n ruditapes_c5155 1 1 wsc domain-containing protein 0 0 n n n ruditapes_c5166 1 1 0 0 n n n ruditapes_c5171 1 1 0 0 n n n ruditapes_c5185 1 1 protein 0 0 n n n ruditapes_c5193 1 1 0 0 n n n ruditapes_c5213 1 1 0 0 n n n ruditapes_c5259 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes_c5261 1 1 0 0 n n n ruditapes_c5276 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes_c5324 1 1 0 0 n n n ruditapes_c5337 1 1 0 0 n n n ruditapes_c5365 1 1 0 0 n n n ruditapes_c5383 1 1 0 0 n n n ruditapes_c5420 1 1 caveolin 3 /// 0030315 // T-tubule /// 0005901 // caveola /// 0048519 // negative regulation of biological process /// 0060035 // notochord cell development /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0016044 // membrane organization /// 0051179 // localization /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0016021 // integral to membrane /// 0045214 // sarcomere organization /// 0043086 // negative regulation of catalytic activity /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0007204 // elevation of cytosolic calcium ion concentration /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding 0 0 n n n ruditapes_c5446 1 1 0 0 n n n ruditapes_c5510 1 1 hypothetical protein BRAFLDRAFT_74515 [Branchiostoma floridae] 0 0 n n n ruditapes_c5525 1 1 0 0 n n n ruditapes_c5565 1 1 0 0 n n n ruditapes_c5595 1 1 0 0 n n n ruditapes_c5607 1 1 complement component q subcomponent-like 2 0 0 n n n ruditapes_c5619 1 1 0 0 n n n ruditapes_c5644 1 1 tolloid-like 2 0 0 n n n ruditapes_c5647 1 1 proline-rich transmembrane protein 1 0 0 n n n ruditapes_c5654 1 1 0 0 n n n ruditapes_c5704 1 1 0 0 n n n ruditapes_c5707 1 1 0 0 n n n ruditapes_c5716 1 1 0 0 n n n ruditapes_c5747 1 1 0 0 n n n ruditapes_c5755 1 1 0 0 n n n ruditapes_c58 1 1 PPE40 [Mycobacterium avium subsp. avium] 0 0 n n n ruditapes_c5814 1 1 0 0 n n n ruditapes_c5825 1 1 0 0 n n n ruditapes_c5831 1 1 0 0 n n n ruditapes_c585 1 1 0 0 n n n ruditapes_c5863 1 1 0 0 n n n ruditapes_c587 1 1 0 0 n n n ruditapes_c5887 1 1 fc low affinity alpha polypeptide /// 0044425 // membrane part /// 0048518 // positive regulation of biological process 0 0 n n n ruditapes_c5899 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_c5931 1 1 0 0 n n n ruditapes_c5936 1 1 0 0 n n n ruditapes_c5964 1 1 calcium-dependent protein kinase 0 0 n n n ruditapes_c5992 1 1 protein /// 0005488 // binding 0 0 n n n ruditapes_c5993 1 1 0 0 n n n ruditapes_c5999 1 1 0 0 n n n ruditapes_c6015 1 1 0 0 n n n ruditapes_c6119 1 1 0 0 n n n ruditapes_c6146 1 1 0 0 n n n ruditapes_c6153 1 1 0 0 n n n ruditapes_c6202 1 1 0 0 n n n ruditapes_c6216 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_c623 1 1 serine protease inhibitor-1l 0 0 n n n ruditapes_c6242 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_c6256 1 1 precerebellin-like protein 0 0 n n n ruditapes_c6287 1 1 0 0 n n n ruditapes_c629 1 1 rhs element vgr protein 0 0 n n n ruditapes_c6298 1 1 0 0 n n n ruditapes_c6350 1 1 0 0 n n n ruditapes_c6396 1 1 0 0 n n n ruditapes_c6419 1 1 0 0 n n n ruditapes_c6424 1 1 0 0 n n n ruditapes_c6486 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c6487 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c6565 1 1 0 0 n n n ruditapes_c6575 1 1 0 0 n n n ruditapes_c6584 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c6599 1 1 0 0 n n n ruditapes_c6669 1 1 isoform a /// 0008236 // serine-type peptidase activity 0 0 n n n ruditapes_c669 1 1 0 0 n n n ruditapes_c6705 1 1 0 0 n n n ruditapes_c6727 1 1 0 0 n n n ruditapes_c6742 1 1 0 0 n n n ruditapes_c6773 1 1 0 0 n n n ruditapes_c6774 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c6779 1 1 0 0 n n n ruditapes_c6780 1 1 0 0 n n n ruditapes_c6783 1 1 0 0 n n n ruditapes_c6785 1 1 0 0 n n n ruditapes_c6794 1 1 0 0 n n n ruditapes_c6799 1 1 0 0 n n n ruditapes_c680 1 1 tyrosine recombinase 0 0 n n n ruditapes_c6896 1 1 0 0 n n n ruditapes_c6908 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c6912 1 1 0 0 n n n ruditapes_c6934 1 1 0 0 n n n ruditapes_c6935 1 1 0 0 n n n ruditapes_c697 1 1 0 0 n n n ruditapes_c6971 1 1 0 0 n n n ruditapes_c6975 1 1 usher syndrome 2a (autosomal mild) 0 0 n n n ruditapes_c6991 1 1 0 0 n n n ruditapes_c7012 1 1 leishmanolysin family protein 0 0 n n n ruditapes_c7013 1 1 c-type lectin 0 0 n n n ruditapes_c7034 1 1 elegans protein confirmed by transcript evidence 0 0 n n n ruditapes_c7067 1 1 af337908_1chitinase chit1 precursor 0 0 n n n ruditapes_c7080 1 1 0 0 n n n ruditapes_c7090 1 1 0 0 n n n ruditapes_c7112 1 1 0 0 n n n ruditapes_c7115 1 1 0 0 n n n ruditapes_c7178 1 1 0 0 n n n ruditapes_c7180 1 1 collectin sub-family member 12 /// 0044425 // membrane part /// 0016043 // cellular component organization /// 0005488 // binding /// 0050789 // regulation of biological process /// 0006955 // immune response /// 0004872 // receptor activity 0 0 n n n ruditapes_c7211 1 1 0 0 n n n ruditapes_c7231 1 1 0 0 n n n ruditapes_c7233 1 1 0 0 n n n ruditapes_c7236 1 1 0 0 n n n ruditapes_c7259 1 1 0 0 n n n ruditapes_c7328 1 1 0 0 n n n ruditapes_c7344 1 1 0 0 n n n ruditapes_c7364 1 1 0 0 n n n ruditapes_c737 1 1 isoform b /// 0005576 // extracellular region /// 0006032 // chitin catabolic process /// 0016021 // integral to membrane /// 0043169 // cation binding /// 0008061 // chitin binding /// 0004568 // chitinase activity 0 0 n n n ruditapes_c7375 1 1 0 0 n n n ruditapes_c7401 1 1 complement component q subcomponent-like 4 0 0 n n n ruditapes_c7404 1 1 collagen type xxi-like protein 0 0 n n n ruditapes_c7448 1 1 0 0 n n n ruditapes_c7476 1 1 0 0 n n n ruditapes_c7484 1 1 galactose-binding lectin 0 0 n n n ruditapes_c7494 1 1 0 0 n n n ruditapes_c7510 1 1 0 0 n n n ruditapes_c7520 1 1 0 0 n n n ruditapes_c7571 1 1 0 0 n n n ruditapes_c7580 1 1 0 0 n n n ruditapes_c7591 1 1 0 0 n n n ruditapes_c7599 1 1 hypothetical protein BRAFLDRAFT_66129 [Branchiostoma floridae] 0 0 n n n ruditapes_c7626 1 1 0 0 n n n ruditapes_c7641 1 1 0 0 n n n ruditapes_c7645 1 1 spi1_craviserine protease inhibitor cvsi-1 precursor 0 0 n n n ruditapes_c7649 1 1 0 0 n n n ruditapes_c7650 1 1 0 0 n n n ruditapes_c7674 1 1 0 0 n n n ruditapes_c7679 1 1 0 0 n n n ruditapes_c7697 1 1 0 0 n n n ruditapes_c7711 1 1 peptidylglycine alpha-amidating isoform cra_c "/// 0046914 // transition metal ion binding /// 0031410 // cytoplasmic vesicle /// 0048731 // system development /// 0048545 // response to steroid hormone stimulus /// 0016715 // oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen /// 0016829 // lyase activity" 0 0 n n n ruditapes_c7713 1 1 0 0 n n n ruditapes_c7717 1 1 0 0 n n n ruditapes_c7724 1 1 0 0 n n n ruditapes_c7730 1 1 0 0 n n n ruditapes_c7734 1 1 0 0 n n n ruditapes_c7749 1 1 class type "/// 0005215 // transporter activity /// 0005488 // binding /// 0016817 // hydrolase activity, acting on acid anhydrides" 0 0 n n n ruditapes_c7770 1 1 0 0 n n n ruditapes_c7790 1 1 0 0 n n n ruditapes_c7792 1 1 0 0 n n n ruditapes_c7796 1 1 0 0 n n n ruditapes_c7804 1 1 0 0 n n n ruditapes_c7818 1 1 0 0 n n n ruditapes_c7824 1 1 0 0 n n n ruditapes_c7830 1 1 elongation factor 2 /// 0005488 // binding /// 0016740 // transferase activity 0 0 n n n ruditapes_c7831 1 1 0 0 n n n ruditapes_c7866 1 1 0 0 n n n ruditapes_c7874 1 1 0 0 n n n ruditapes_c7889 1 1 0 0 n n n ruditapes_c7908 1 1 0 0 n n n ruditapes_c7927 1 1 hypothetical protein BRAFLDRAFT_76555 [Branchiostoma floridae] 0 0 n n n ruditapes_c7965 1 1 0 0 n n n ruditapes_c7992 1 1 0 0 n n n ruditapes_c8011 1 1 0 0 n n n ruditapes_c8024 1 1 0 0 n n n ruditapes_c8030 1 1 0 0 n n n ruditapes_c8046 1 1 0 0 n n n ruditapes_c8082 1 1 0 0 n n n ruditapes_c8085 1 1 0 0 n n n ruditapes_c8106 1 1 0 0 n n n ruditapes_c8114 1 1 0 0 n n n ruditapes_c8133 1 1 0 0 n n n ruditapes_c8143 1 1 0 0 n n n ruditapes_c8191 1 1 0 0 n n n ruditapes_c8199 1 1 0 0 n n n ruditapes_c8218 1 1 0 0 n n n ruditapes_c8220 1 1 0 0 n n n ruditapes_c8226 1 1 si:rp71- protein 0 0 n n n ruditapes_c8229 1 1 0 0 n n n ruditapes_c8238 1 1 lysozyme "/// 0042742 // defense response to bacterium /// 0016798 // hydrolase activity, acting on glycosyl bonds /// 0032502 // developmental process" 0 0 n n n ruditapes_c8277 1 1 tenascin c 0 0 n n n ruditapes_c8281 1 1 0 0 n n n ruditapes_c8284 1 1 myc homolog 0 0 n n n ruditapes_c8310 1 1 0 0 n n n ruditapes_c8316 1 1 0 0 n n n ruditapes_c8319 1 1 0 0 n n n ruditapes_c8354 1 1 0 0 n n n ruditapes_c8358 1 1 0 0 n n n ruditapes_c8393 1 1 0 0 n n n ruditapes_c8415 1 1 fc low affinity alpha polypeptide /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin /// 0009897 // external side of plasma membrane 0 0 n n n ruditapes_c8427 1 1 0 0 n n n ruditapes_c8467 1 1 0 0 n n n ruditapes_c8469 1 1 0 0 n n n ruditapes_c847 1 1 0 0 n n n ruditapes_c8470 1 1 0 0 n n n ruditapes_c8483 1 1 protein 0 0 n n n ruditapes_c8492 1 1 0 0 n n n ruditapes_c8503 1 1 0 0 n n n ruditapes_c8515 1 1 0 0 n n n ruditapes_c8535 1 1 0 0 n n n ruditapes_c8541 1 1 complement component q subcomponent-like 4 0 0 n n n ruditapes_c8558 1 1 0 0 n n n ruditapes_c8579 1 1 0 0 n n n ruditapes_c8595 1 1 0 0 n n n ruditapes_c8622 1 1 0 0 n n n ruditapes_c8623 1 1 0 0 n n n ruditapes_c8645 1 1 proline-rich transmembrane protein 1 0 0 n n n ruditapes_c8665 1 1 0 0 n n n ruditapes_c8672 1 1 0 0 n n n ruditapes_c8675 1 1 0 0 n n n ruditapes_c8678 1 1 0 0 n n n ruditapes_c8683 1 1 0 0 n n n ruditapes_c8702 1 1 0 0 n n n ruditapes_c8721 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_c8772 1 1 0 0 n n n ruditapes_c8805 1 1 0 0 n n n ruditapes_c8886 1 1 0 0 n n n ruditapes_c8899 1 1 0 0 n n n ruditapes_c8924 1 1 0 0 n n n ruditapes_c8925 1 1 0 0 n n n ruditapes_c8930 1 1 0 0 n n n ruditapes_c8968 1 1 0 0 n n n ruditapes_c9012 1 1 0 0 n n n ruditapes_c9014 1 1 0 0 n n n ruditapes_c9018 1 1 0 0 n n n ruditapes_c9056 1 1 0 0 n n n ruditapes_c9083 1 1 0 0 n n n ruditapes_c9084 1 1 0 0 n n n ruditapes_c9104 1 1 0 0 n n n ruditapes_c9105 1 1 0 0 n n n ruditapes_c9113 1 1 nervana 2 /// 0040007 // growth /// 0032501 // multicellular organismal process /// 0032502 // developmental process 0 0 n n n ruditapes_c9123 1 1 0 0 n n n ruditapes_c9164 1 1 0 0 n n n ruditapes_c9165 1 1 0 0 n n n ruditapes_c9178 1 1 0 0 n n n ruditapes_c918 1 1 0 0 n n n ruditapes_c920 1 1 antimicrobial peptide hydramacin 0 0 n n n ruditapes_c9209 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_c926 1 1 hypothetical protein BRAFLDRAFT_122288 [Branchiostoma floridae] 0 0 n n n ruditapes_c9271 1 1 0 0 n n n ruditapes_c9272 1 1 0 0 n n n ruditapes_c930 1 1 0 0 n n n ruditapes_c931 1 1 c-type superfamily member 14 isoform 2 isoform 2 /// 0005488 // binding /// 0016020 // membrane 0 0 n n n ruditapes_c9310 1 1 0 0 n n n ruditapes_c9342 1 1 platelet endothelial aggregation receptor 1 0 0 n n n ruditapes_c9354 1 1 0 0 n n n ruditapes_c9392 1 1 0 0 n n n ruditapes_c9395 1 1 0 0 n n n ruditapes_c9401 1 1 0 0 n n n ruditapes_c9406 1 1 0 0 n n n ruditapes_c9411 1 1 0 0 n n n ruditapes_c9414 1 1 0 0 n n n ruditapes_c9417 1 1 0 0 n n n ruditapes_c9428 1 1 homeobox protein /// 0004801 // transaldolase activity /// 0003700 // transcription factor activity /// 0045944 // positive regulation of transcription from RNA polymerase II promoter /// 0043565 // sequence-specific DNA binding /// 0030326 // embryonic limb morphogenesis /// 0005515 // protein binding /// 0007387 // anterior compartment specification /// 0007388 // posterior compartment specification /// 0005667 // transcription factor complex /// 0005737 // cytoplasm /// 0009954 // proximal/distal pattern formation 0 0 n n n ruditapes_c9431 1 1 0 0 n n n ruditapes_c9448 1 1 0 0 n n n ruditapes_c9452 1 1 0 0 n n n ruditapes_c9457 1 1 0 0 n n n ruditapes_c9472 1 1 fc low affinity alpha polypeptide /// 0002925 // positive regulation of humoral immune response mediated by circulating immunoglobulin /// 0009897 // external side of plasma membrane 0 0 n n n ruditapes_c9479 1 1 0 0 n n n ruditapes_c9489 1 1 0 0 n n n ruditapes_c9513 1 1 0 0 n n n ruditapes_c9532 1 1 0 0 n n n ruditapes_c9549 1 1 0 0 n n n ruditapes_c9550 1 1 0 0 n n n ruditapes_c9584 1 1 0 0 n n n ruditapes_c9601 1 1 0 0 n n n ruditapes_c9620 1 1 0 0 n n n ruditapes_c9633 1 1 0 0 n n n ruditapes_c9646 1 1 0 0 n n n ruditapes_c9652 1 1 actp2_cymec ame: full=echotoxin-2 short=echt 2 flags: precursor 0 0 n n n ruditapes_c9657 1 1 0 0 n n n ruditapes_c968 1 1 0 0 n n n ruditapes_c9690 1 1 tocopherol transfer 0 0 n n n ruditapes_c9697 1 1 0 0 n n n ruditapes_c972 1 1 sjchgc07766 protein 0 0 n n n ruditapes_c9737 1 1 0 0 n n n ruditapes_c9738 1 1 0 0 n n n ruditapes_c9756 1 1 0 0 n n n ruditapes_c9766 1 1 0 0 n n n ruditapes_c9785 1 1 0 0 n n n ruditapes_c9795 1 1 0 0 n n n ruditapes_c9800 1 1 PREDICTED: hypothetical protein [Hydra magnipapillata] 0 0 n n n ruditapes_c9826 1 1 0 0 n n n ruditapes_c9830 1 1 loc100135371 protein 0 0 n n n ruditapes_c9846 1 1 0 0 n n n ruditapes_c9849 1 1 dna double-strand break repair rad50 atpase 0 0 n n n ruditapes_c9892 1 1 0 0 n n n ruditapes_c9893 1 1 0 0 n n n ruditapes_c9921 1 1 0 0 n n n ruditapes_c9926 1 1 0 0 n n n ruditapes_c9953 1 1 0 0 n n n ruditapes_c9978 1 1 0 0 n n n ruditapes_c9981 1 1 0 0 n n n ruditapes_c9982 1 1 0 0 n n n ruditapes_c9985 1 1 0 0 n n n ruditapes_lrc10032 1 1 0 0 n n n ruditapes_lrc10201 1 1 0 0 n n n ruditapes_lrc10278 1 1 0 0 n n n ruditapes_lrc10573 1 1 0 0 n n n ruditapes_lrc10576 1 1 0 0 n n n ruditapes_lrc10580 1 1 PREDICTED: similar to GA21374-PA [Strongylocentrotus purpuratus] 0 0 n n n ruditapes_lrc10687 1 1 0 0 n n n ruditapes_lrc10855 1 1 0 0 n n n ruditapes_lrc10963 1 1 0 0 n n n ruditapes_lrc11238 1 1 0 0 n n n ruditapes_lrc11306 1 1 0 0 n n n ruditapes_lrc11485 1 1 0 0 n n n ruditapes_lrc12270 1 1 0 0 n n n ruditapes_lrc12567 1 1 0 0 n n n ruditapes_lrc12798 1 1 0 0 n n n ruditapes_lrc12828 1 1 caveolin 3 /// 0006810 // transport /// 0008361 // regulation of cell size /// 0044444 // cytoplasmic part /// 0051493 // regulation of cytoskeleton organization /// 0005624 // membrane fraction /// 0044237 // cellular metabolic process /// 0044238 // primary metabolic process /// 0030154 // cell differentiation /// 0005515 // protein binding /// 0043234 // protein complex /// 0006469 // negative regulation of protein kinase activity /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0008016 // regulation of heart contraction /// 0042383 // sarcolemma /// 0044459 // plasma membrane part /// 0048523 // negative regulation of cellular process /// 0045121 // membrane raft /// 0042391 // regulation of membrane potential /// 0022607 // cellular component assembly 0 0 n n n ruditapes_lrc12852 1 1 protein kinase domain containing protein /// 0000166 // nucleotide binding /// 0004672 // protein kinase activity 0 0 n n n ruditapes_lrc12911 1 1 0 0 n n n ruditapes_lrc13700 1 1 0 0 n n n ruditapes_lrc13827 1 1 0 0 n n n ruditapes_lrc14390 1 1 0 0 n n n ruditapes_lrc14630 1 1 0 0 n n n ruditapes_lrc14711 1 1 0 0 n n n ruditapes_lrc14764 1 1 0 0 n n n ruditapes_lrc14795 1 1 prophage dlp12 integrase /// 0008979 // prophage integrase activity /// 0015074 // DNA integration /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes_lrc14957 1 1 0 0 n n n ruditapes_lrc15013 1 1 0 0 n n n ruditapes_lrc15096 1 1 0 0 n n n ruditapes_lrc15220 1 1 0 0 n n n ruditapes_lrc15258 1 1 0 0 n n n ruditapes_lrc15397 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc15443 1 1 0 0 n n n ruditapes_lrc15571 1 1 0 0 n n n ruditapes_lrc15711 1 1 0 0 n n n ruditapes_lrc15826 1 1 0 0 n n n ruditapes_lrc16089 1 1 0 0 n n n ruditapes_lrc16102 1 1 site-specific phage integrase family /// 0015074 // DNA integration /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes_lrc16116 1 1 prophage dlp12 integrase /// 0008979 // prophage integrase activity /// 0009987 // cellular process 0 0 n n n ruditapes_lrc16188 1 1 0 0 n n n ruditapes_lrc16387 1 1 0 0 n n n ruditapes_lrc16424 1 1 0 0 n n n ruditapes_lrc16443 1 1 0 0 n n n ruditapes_lrc16783 1 1 0 0 n n n ruditapes_lrc16892 1 1 dlp12 prophage integrase 0 0 n n n ruditapes_lrc16962 1 1 0 0 n n n ruditapes_lrc17220 1 1 0 0 n n n ruditapes_lrc17281 1 1 prophage dlp12 integrase /// 0006259 // DNA metabolic process /// 0008979 // prophage integrase activity 0 0 n n n ruditapes_lrc17547 1 1 0 0 n n n ruditapes_lrc17570 1 1 hypothetical protein [Mercenaria mercenaria] 0 0 n n n ruditapes_lrc17618 1 1 predicted protein [Nematostella vectensis] /// 0000166 // nucleotide binding /// 0017111 // nucleoside-triphosphatase activity 0 0 n n n ruditapes_lrc17752 1 1 0 0 n n n ruditapes_lrc18312 1 1 complement component q subcomponent-like 4 0 0 n n n ruditapes_lrc18398 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_lrc18592 1 1 0 0 n n n ruditapes_lrc18627 1 1 0 0 n n n ruditapes_lrc18718 1 1 0 0 n n n ruditapes_lrc19430 1 1 protein 0 0 n n n ruditapes_lrc19804 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_lrc19840 1 1 0 0 n n n ruditapes_lrc19901 1 1 0 0 n n n ruditapes_lrc19992 1 1 0 0 n n n ruditapes_lrc19996 1 1 0 0 n n n ruditapes_lrc20064 1 1 0 0 n n n ruditapes_lrc20120 1 1 0 0 n n n ruditapes_lrc20234 1 1 hypothetical protein TGME49_106360 [Toxoplasma gondii ME49] 0 0 n n n ruditapes_lrc20244 1 1 neurm_aplca ame: full=neuromacin-like protein flags: precursor 0 0 n n n ruditapes_lrc20458 1 1 0 0 n n n ruditapes_lrc20616 1 1 prophage dlp12 integrase /// 0009987 // cellular process 0 0 n n n ruditapes_lrc20681 1 1 0 0 n n n ruditapes_lrc20698 1 1 0 0 n n n ruditapes_lrc20716 1 1 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0 n n n ruditapes_lrc20903 1 1 0 0 n n n ruditapes_lrc21014 1 1 0 0 n n n ruditapes_lrc21456 1 1 0 0 n n n ruditapes_lrc21476 1 1 0 0 n n n ruditapes_lrc21589 1 1 0 0 n n n ruditapes_lrc21901 1 1 0 0 n n n ruditapes_lrc21956 1 1 0 0 n n n ruditapes_lrc22371 1 1 large subunit ribosomal protein 2 0 0 n n n ruditapes_lrc22403 1 1 0 0 n n n ruditapes_lrc22794 1 1 0 0 n n n ruditapes_lrc22863 1 1 integrase /// 0003824 // catalytic activity 0 0 n n n ruditapes_lrc22910 1 1 0 0 n n n ruditapes_lrc22943 1 1 0 0 n n n ruditapes_lrc23120 1 1 0 0 n n n ruditapes_lrc23131 1 1 chondroitin sulfate proteoglycan core protein 0 0 n n n ruditapes_lrc23418 1 1 0 0 n n n ruditapes_lrc23460 1 1 0 0 n n n ruditapes_lrc23463 1 1 0 0 n n n ruditapes_lrc23603 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes_lrc23858 1 1 0 0 n n n ruditapes_lrc24060 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc24138 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc24174 1 1 PREDICTED: similar to CG9306-PA [Apis mellifera] 0 0 n n n ruditapes_lrc24297 1 1 0 0 n n n ruditapes_lrc24451 1 1 0 0 n n n ruditapes_lrc24504 1 1 0 0 n n n ruditapes_lrc24612 1 1 0 0 n n n ruditapes_lrc24668 1 1 0 0 n n n ruditapes_lrc24786 1 1 0 0 n n n ruditapes_lrc24949 1 1 0 0 n n n ruditapes_lrc24956 1 1 0 0 n n n ruditapes_lrc25261 1 1 0 0 n n n ruditapes_lrc25308 1 1 0 0 n n n ruditapes_lrc25309 1 1 0 0 n n n ruditapes_lrc25395 1 1 0 0 n n n ruditapes_lrc25420 1 1 0 0 n n n ruditapes_lrc25711 1 1 0 0 n n n ruditapes_lrc25720 1 1 0 0 n n n ruditapes_lrc25740 1 1 0 0 n n n ruditapes_lrc25803 1 1 glutathione s-transferase 0 0 n n n ruditapes_lrc25815 1 1 0 0 n n n ruditapes_lrc25844 1 1 integrase /// 0015074 // DNA integration /// 0006310 // DNA recombination /// 0003677 // DNA binding 0 0 n n n ruditapes_lrc25877 1 1 0 0 n n n ruditapes_lrc25892 1 1 0 0 n n n ruditapes_lrc25943 1 1 0 0 n n n ruditapes_lrc25995 1 1 0 0 n n n ruditapes_lrc26023 1 1 0 0 n n n ruditapes_lrc26055 1 1 0 0 n n n ruditapes_lrc26060 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc26157 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc26365 1 1 0 0 n n n ruditapes_lrc26406 1 1 0 0 n n n ruditapes_lrc26416 1 1 0 0 n n n ruditapes_lrc26451 1 1 0 0 n n n ruditapes_lrc26706 1 1 0 0 n n n ruditapes_lrc26799 1 1 0 0 n n n ruditapes_lrc26997 1 1 0 0 n n n ruditapes_lrc27015 1 1 integrase /// 0009987 // cellular process 0 0 n n n ruditapes_lrc27075 1 1 0 0 n n n ruditapes_lrc27077 1 1 0 0 n n n ruditapes_lrc27112 1 1 0 0 n n n ruditapes_lrc27168 1 1 0 0 n n n ruditapes_lrc27214 1 1 0 0 n n n ruditapes_lrc27274 1 1 0 0 n n n ruditapes_lrc27360 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc27465 1 1 0 0 n n n ruditapes_lrc27551 1 1 0 0 n n n ruditapes_lrc27660 1 1 0 0 n n n ruditapes_lrc27672 1 1 0 0 n n n ruditapes_lrc27689 1 1 0 0 n n n ruditapes_lrc27802 1 1 0 0 n n n ruditapes_lrc27843 1 1 0 0 n n n ruditapes_lrc27903 1 1 0 0 n n n ruditapes_lrc27964 1 1 0 0 n n n ruditapes_lrc27984 1 1 0 0 n n n ruditapes_lrc27987 1 1 0 0 n n n ruditapes_lrc28073 1 1 0 0 n n n ruditapes_lrc28080 1 1 0 0 n n n ruditapes_lrc28095 1 1 0 0 n n n ruditapes_lrc28173 1 1 0 0 n n n ruditapes_lrc28180 1 1 0 0 n n n ruditapes_lrc28195 1 1 0 0 n n n ruditapes_lrc28217 1 1 0 0 n n n ruditapes_lrc28233 1 1 0 0 n n n ruditapes_lrc28264 1 1 0 0 n n n ruditapes_lrc28279 1 1 0 0 n n n ruditapes_lrc28312 1 1 0 0 n n n ruditapes_lrc28365 1 1 protein kinase c-binding protein nell1 0 0 n n n ruditapes_lrc28373 1 1 0 0 n n n ruditapes_lrc28465 1 1 0 0 n n n ruditapes_lrc28490 1 1 0 0 n n n ruditapes_lrc28795 1 1 0 0 n n n ruditapes_lrc28900 1 1 0 0 n n n ruditapes_lrc28964 1 1 0 0 n n n ruditapes_lrc28995 1 1 0 0 n n n ruditapes_lrc29043 1 1 0 0 n n n ruditapes_lrc29052 1 1 0 0 n n n ruditapes_lrc29114 1 1 0 0 n n n ruditapes_lrc29212 1 1 0 0 n n n ruditapes_lrc29224 1 1 0 0 n n n ruditapes_lrc29226 1 1 0 0 n n n ruditapes_lrc29334 1 1 0 0 n n n ruditapes_lrc29430 1 1 0 0 n n n ruditapes_lrc29461 1 1 0 0 n n n ruditapes_lrc29524 1 1 0 0 n n n ruditapes_lrc29534 1 1 0 0 n n n ruditapes_lrc29555 1 1 0 0 n n n ruditapes_lrc29639 1 1 0 0 n n n ruditapes_lrc29722 1 1 0 0 n n n ruditapes_lrc29780 1 1 0 0 n n n ruditapes_lrc29814 1 1 0 0 n n n ruditapes_lrc29818 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc29873 1 1 0 0 n n n ruditapes_lrc29930 1 1 0 0 n n n ruditapes_lrc29958 1 1 0 0 n n n ruditapes_lrc29996 1 1 0 0 n n n ruditapes_lrc29998 1 1 0 0 n n n ruditapes_lrc30046 1 1 0 0 n n n ruditapes_lrc30076 1 1 0 0 n n n ruditapes_lrc30078 1 1 0 0 n n n ruditapes_lrc30084 1 1 mitochondrial acyl carrier protein 0 0 n n n ruditapes_lrc30135 1 1 0 0 n n n ruditapes_lrc30172 1 1 0 0 n n n ruditapes_lrc30183 1 1 0 0 n n n ruditapes_lrc30190 1 1 0 0 n n n ruditapes_lrc30228 1 1 0 0 n n n ruditapes_lrc30269 1 1 0 0 n n n ruditapes_lrc30330 1 1 0 0 n n n ruditapes_lrc30341 1 1 0 0 n n n ruditapes_lrc30357 1 1 0 0 n n n ruditapes_lrc30401 1 1 0 0 n n n ruditapes_lrc30416 1 1 0 0 n n n ruditapes_lrc30473 1 1 0 0 n n n ruditapes_lrc30498 1 1 0 0 n n n ruditapes_lrc30517 1 1 0 0 n n n ruditapes_lrc30524 1 1 0 0 n n n ruditapes_lrc30530 1 1 0 0 n n n ruditapes_lrc30545 1 1 0 0 n n n ruditapes_lrc30561 1 1 0 0 n n n ruditapes_lrc30592 1 1 0 0 n n n ruditapes_lrc30597 1 1 0 0 n n n ruditapes_lrc30598 1 1 0 0 n n n ruditapes_lrc30634 1 1 0 0 n n n ruditapes_lrc30637 1 1 0 0 n n n ruditapes_lrc30651 1 1 0 0 n n n ruditapes_lrc30674 1 1 0 0 n n n ruditapes_lrc30711 1 1 0 0 n n n ruditapes_lrc30766 1 1 0 0 n n n ruditapes_lrc30772 1 1 0 0 n n n ruditapes_lrc30812 1 1 0 0 n n n ruditapes_lrc30853 1 1 0 0 n n n ruditapes_lrc30861 1 1 0 0 n n n ruditapes_lrc30865 1 1 0 0 n n n ruditapes_lrc30876 1 1 0 0 n n n ruditapes_lrc30944 1 1 0 0 n n n ruditapes_lrc30952 1 1 0 0 n n n ruditapes_lrc31005 1 1 0 0 n n n ruditapes_lrc31017 1 1 0 0 n n n ruditapes_lrc31028 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc31082 1 1 0 0 n n n ruditapes_lrc31130 1 1 0 0 n n n ruditapes_lrc31165 1 1 0 0 n n n ruditapes_lrc31174 1 1 0 0 n n n ruditapes_lrc31179 1 1 0 0 n n n ruditapes_lrc31183 1 1 0 0 n n n ruditapes_lrc31198 1 1 0 0 n n n ruditapes_lrc31224 1 1 0 0 n n n ruditapes_lrc31228 1 1 0 0 n n n ruditapes_lrc31238 1 1 0 0 n n n ruditapes_lrc31271 1 1 0 0 n n n ruditapes_lrc31280 1 1 0 0 n n n ruditapes_lrc31288 1 1 0 0 n n n ruditapes_lrc31324 1 1 0 0 n n n ruditapes_lrc31334 1 1 0 0 n n n ruditapes_lrc31337 1 1 0 0 n n n ruditapes_lrc31358 1 1 0 0 n n n ruditapes_lrc31367 1 1 0 0 n n n ruditapes_lrc31370 1 1 0 0 n n n ruditapes_lrc31377 1 1 0 0 n n n ruditapes_lrc31381 1 1 0 0 n n n ruditapes_lrc31393 1 1 0 0 n n n ruditapes_lrc31400 1 1 0 0 n n n ruditapes_lrc31414 1 1 0 0 n n n ruditapes_lrc31421 1 1 0 0 n n n ruditapes_lrc31458 1 1 0 0 n n n ruditapes_lrc31511 1 1 galactose-specific c-type 0 0 n n n ruditapes_lrc31516 1 1 0 0 n n n ruditapes_lrc31553 1 1 0 0 n n n ruditapes_lrc31554 1 1 0 0 n n n ruditapes_lrc31578 1 1 0 0 n n n ruditapes_lrc31590 1 1 0 0 n n n ruditapes_lrc31603 1 1 0 0 n n n ruditapes_lrc31657 1 1 0 0 n n n ruditapes_lrc31675 1 1 0 0 n n n ruditapes_lrc31701 1 1 0 0 n n n ruditapes_lrc31717 1 1 0 0 n n n ruditapes_lrc31727 1 1 0 0 n n n ruditapes_lrc31733 1 1 0 0 n n n ruditapes_lrc31746 1 1 0 0 n n n ruditapes_lrc31777 1 1 0 0 n n n ruditapes_lrc31792 1 1 0 0 n n n ruditapes_lrc31796 1 1 0 0 n n n ruditapes_lrc31814 1 1 0 0 n n n ruditapes_lrc31815 1 1 0 0 n n n ruditapes_lrc31828 1 1 0 0 n n n ruditapes_lrc31836 1 1 0 0 n n n ruditapes_lrc31842 1 1 0 0 n n n ruditapes_lrc31844 1 1 0 0 n n n ruditapes_lrc31856 1 1 0 0 n n n ruditapes_lrc31863 1 1 0 0 n n n ruditapes_lrc31866 1 1 0 0 n n n ruditapes_lrc31871 1 1 0 0 n n n ruditapes_lrc31887 1 1 0 0 n n n ruditapes_lrc31890 1 1 0 0 n n n ruditapes_lrc31917 1 1 0 0 n n n ruditapes_lrc31920 1 1 0 0 n n n ruditapes_lrc31938 1 1 0 0 n n n ruditapes_lrc31940 1 1 0 0 n n n ruditapes_lrc31960 1 1 0 0 n n n ruditapes_lrc31965 1 1 0 0 n n n ruditapes_lrc31971 1 1 0 0 n n n ruditapes_lrc31972 1 1 0 0 n n n ruditapes_lrc31977 1 1 0 0 n n n ruditapes_lrc31989 1 1 0 0 n n n ruditapes_lrc32001 1 1 0 0 n n n ruditapes_lrc32004 1 1 0 0 n n n ruditapes_lrc32007 1 1 0 0 n n n ruditapes_lrc32010 1 1 0 0 n n n ruditapes_lrc32037 1 1 0 0 n n n ruditapes_lrc32039 1 1 0 0 n n n ruditapes_lrc32044 1 1 0 0 n n n ruditapes_lrc32049 1 1 0 0 n n n ruditapes_lrc32052 1 1 0 0 n n n ruditapes_lrc32054 1 1 0 0 n n n ruditapes_lrc32059 1 1 0 0 n n n ruditapes_lrc32063 1 1 0 0 n n n ruditapes_lrc32070 1 1 0 0 n n n ruditapes_lrc32071 1 1 0 0 n n n ruditapes_lrc32074 1 1 0 0 n n n ruditapes_lrc32075 1 1 0 0 n n n ruditapes_lrc32077 1 1 0 0 n n n ruditapes_lrc32080 1 1 0 0 n n n ruditapes_lrc32083 1 1 proline-rich protein 0 0 n n n ruditapes_lrc32084 1 1 0 0 n n n ruditapes_lrc32088 1 1 0 0 n n n ruditapes_lrc32089 1 1 0 0 n n n ruditapes_lrc32090 1 1 0 0 n n n ruditapes_lrc32091 1 1 0 0 n n n ruditapes_lrc32092 1 1 0 0 n n n ruditapes_lrc32095 1 1 0 0 n n n ruditapes_lrc32096 1 1 0 0 n n n ruditapes_lrc32098 1 1 0 0 n n n ruditapes_lrc32099 1 1 0 0 n n n ruditapes_lrc32101 1 1 0 0 n n n ruditapes_lrc32132 1 1 0 0 n n n ruditapes_lrc32159 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc32179 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc32184 1 1 0 0 n n n ruditapes_lrc32204 1 1 0 0 n n n ruditapes_lrc32212 1 1 0 0 n n n ruditapes_lrc32233 1 1 mantle gene 4 0 0 n n n ruditapes_lrc32237 1 1 0 0 n n n ruditapes_lrc32247 1 1 0 0 n n n ruditapes_lrc32269 1 1 0 0 n n n ruditapes_lrc32290 1 1 0 0 n n n ruditapes_lrc32310 1 1 ovary-specific c1q-like factor 0 0 n n n ruditapes_lrc32345 1 1 0 0 n n n ruditapes_lrc32390 1 1 0 0 n n n ruditapes_lrc32414 1 1 0 0 n n n ruditapes_lrc32491 1 1 0 0 n n n ruditapes_lrc32493 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes_lrc32518 1 1 0 0 n n n ruditapes_lrc32530 1 1 0 0 n n n ruditapes_lrc32532 1 1 0 0 n n n ruditapes_lrc32544 1 1 0 0 n n n ruditapes_lrc32560 1 1 0 0 n n n ruditapes_lrc32567 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes_lrc32600 1 1 retinoblastoma binding protein 9 /// 0042127 // regulation of cell proliferation /// 0009312 // oligosaccharide biosynthetic process /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity 0 0 n n n ruditapes_lrc32636 1 1 0 0 n n n ruditapes_lrc32653 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_lrc32673 1 1 0 0 n n n ruditapes_lrc32683 1 1 0 0 n n n ruditapes_lrc32713 1 1 0 0 n n n ruditapes_lrc32832 1 1 0 0 n n n ruditapes_lrc32838 1 1 0 0 n n n ruditapes_lrc32890 1 1 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0 0 n n n ruditapes_lrc32892 1 1 0 0 n n n ruditapes_lrc32920 1 1 hypothetical protein BRAFLDRAFT_84494 [Branchiostoma floridae] 0 0 n n n ruditapes_lrc32954 1 1 caveolin 3 /// 0030315 // T-tubule /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0030154 // cell differentiation /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0046716 // muscle maintenance /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding 0 0 n n n ruditapes_lrc32962 1 1 0 0 n n n ruditapes_lrc33101 1 1 0 0 n n n ruditapes_lrc33128 1 1 chondroitin sulfate proteoglycan 2 /// 0007275 // multicellular organismal development /// 0005488 // binding /// 0009987 // cellular process 0 0 n n n ruditapes_lrc33132 1 1 0 0 n n n ruditapes_lrc33148 1 1 0 0 n n n ruditapes_lrc33149 1 1 0 0 n n n ruditapes_lrc33165 1 1 0 0 n n n ruditapes_lrc33176 1 1 flj45910 protein /// 0005488 // binding 0 0 n n n ruditapes_lrc33181 1 1 protein 0 0 n n n ruditapes_lrc33187 1 1 protein kinase c inhibitor aswz variant 5 /// 0005634 // nucleus /// 0005737 // cytoplasm /// 0016787 // hydrolase activity /// 0016301 // kinase activity 0 0 n n n ruditapes_lrc33189 1 1 conserved plasmodium protein 0 0 n n n ruditapes_lrc33235 1 1 ribosomal protein l21 /// 0005811 // lipid particle /// 0022625 // cytosolic large ribosomal subunit /// 0000022 // mitotic spindle elongation /// 0006412 // translation /// 0003735 // structural constituent of ribosome 0 0 n n n ruditapes_lrc33239 1 1 0 0 n n n ruditapes_lrc33241 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_lrc33258 1 1 0 0 n n n ruditapes_lrc33263 1 1 0 0 n n n ruditapes_lrc33336 1 1 mannose c type 1-like 1 0 0 n n n ruditapes_lrc33339 1 1 retinoblastoma binding protein 9 0 0 n n n ruditapes_lrc33342 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc33368 1 1 0 0 n n n ruditapes_lrc33394 1 1 0 0 n n n ruditapes_lrc33432 1 1 0 0 n n n ruditapes_lrc33441 1 1 0 0 n n n ruditapes_lrc33459 1 1 0 0 n n n ruditapes_lrc33471 1 1 0 0 n n n ruditapes_lrc33481 1 1 0 0 n n n ruditapes_lrc33523 1 1 0 0 n n n ruditapes_lrc33548 1 1 0 0 n n n ruditapes_lrc33597 1 1 0 0 n n n ruditapes_lrc33618 1 1 0 0 n n n ruditapes_lrc33648 1 1 0 0 n n n ruditapes_lrc33654 1 1 0 0 n n n ruditapes_lrc33711 1 1 0 0 n n n ruditapes_lrc33762 1 1 methyltransferase type 11 0 0 n n n ruditapes_lrc33775 1 1 0 0 n n n ruditapes_lrc33780 1 1 0 0 n n n ruditapes_lrc33798 1 1 0 0 n n n ruditapes_lrc33810 1 1 0 0 n n n ruditapes_lrc33825 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes_lrc33829 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes_lrc33855 1 1 0 0 n n n ruditapes_lrc33911 1 1 0 0 n n n ruditapes_lrc33928 1 1 0 0 n n n ruditapes_lrc33934 1 1 lysozyme /// 0005576 // extracellular region /// 0019835 // cytolysis /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc33954 1 1 0 0 n n n ruditapes_lrc33984 1 1 0 0 n n n ruditapes_lrc33989 1 1 "conserved hypothetical protein; putative CALCIUM BINDING SIGNAL PEPTIDE PROTEIN, Calcium-binding EF-hand motifs [Cupriavidus taiwanensis]" 0 0 n n n ruditapes_lrc34004 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes_lrc34030 1 1 0 0 n n n ruditapes_lrc34065 1 1 methyltransferase type 11 0 0 n n n ruditapes_lrc34076 1 1 0 0 n n n ruditapes_lrc34091 1 1 0 0 n n n ruditapes_lrc34115 1 1 DEC-3 [Lymnaea stagnalis] 0 0 n n n ruditapes_lrc34116 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_lrc34129 1 1 0 0 n n n ruditapes_lrc34161 1 1 0 0 n n n ruditapes_lrc34179 1 1 0 0 n n n ruditapes_lrc34186 1 1 tpa: isg12 protein 0 0 n n n ruditapes_lrc34204 1 1 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0042645 // mitochondrial nucleoid /// 0005783 // endoplasmic reticulum /// 0016787 // hydrolase activity /// 0005792 // microsome 0 0 n n n ruditapes_lrc34215 1 1 0 0 n n n ruditapes_lrc34228 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_lrc34256 1 1 0 0 n n n ruditapes_lrc34271 1 1 0 0 n n n ruditapes_lrc34282 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes_lrc34285 1 1 peptidylprolyl isomerase fkbp-type /// 0005634 // nucleus /// 0000747 // conjugation with cellular fusion /// 0005829 // cytosol /// 0003755 // peptidyl-prolyl cis-trans isomerase activity /// 0006457 // protein folding 0 0 n n n ruditapes_lrc34307 1 1 0 0 n n n ruditapes_lrc34339 1 1 0 0 n n n ruditapes_lrc34427 1 1 0 0 n n n ruditapes_lrc34457 1 1 cysteine and glycine-rich protein 1 /// 0032501 // multicellular organismal process /// 0005488 // binding /// 0043229 // intracellular organelle /// 0032502 // developmental process /// 0009987 // cellular process 0 0 n n n ruditapes_lrc34475 1 1 0 0 n n n ruditapes_lrc34482 1 1 bdef_tactr ame: full=big defensin flags: precursor /// 0050896 // response to stimulus 0 0 n n n ruditapes_lrc34511 1 1 0 0 n n n ruditapes_lrc34535 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc34554 1 1 0 0 n n n ruditapes_lrc34555 1 1 hypothetical protein BRAFLDRAFT_125500 [Branchiostoma floridae] 0 0 n n n ruditapes_lrc34558 1 1 dopamine beta hydroxylase-like protein 0 0 n n n ruditapes_lrc34592 1 1 0 0 n n n ruditapes_lrc34637 1 1 0 0 n n n ruditapes_lrc34683 1 1 0 0 n n n ruditapes_lrc34693 1 1 0 0 n n n ruditapes_lrc34737 1 1 0 0 n n n ruditapes_lrc34744 1 1 0 0 n n n ruditapes_lrc34759 1 1 0 0 n n n ruditapes_lrc34782 1 1 0 0 n n n ruditapes_lrc34789 1 1 0 0 n n n ruditapes_lrc34796 1 1 0 0 n n n ruditapes_lrc34850 1 1 0 0 n n n ruditapes_lrc34860 1 1 0 0 n n n ruditapes_lrc34870 1 1 rna recognition 0 0 n n n ruditapes_lrc34877 1 1 multiple egf-like-domains 6 0 0 n n n ruditapes_lrc34882 1 1 0 0 n n n ruditapes_lrc34913 1 1 0 0 n n n ruditapes_lrc34938 1 1 0 0 n n n ruditapes_lrc34946 1 1 0 0 n n n ruditapes_lrc34962 1 1 metal-binding protein 0 0 n n n ruditapes_lrc34997 1 1 0 0 n n n ruditapes_lrc34998 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes_lrc35004 1 1 0 0 n n n ruditapes_lrc35033 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc35035 1 1 0 0 n n n ruditapes_lrc35038 1 1 leucine rich repeat containing 59 /// 0044425 // membrane part /// 0005515 // protein binding /// 0005783 // endoplasmic reticulum 0 0 n n n ruditapes_lrc35053 1 1 protein 0 0 n n n ruditapes_lrc35060 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc35074 1 1 0 0 n n n ruditapes_lrc35078 1 1 0 0 n n n ruditapes_lrc35121 1 1 0 0 n n n ruditapes_lrc35142 1 1 0 0 n n n ruditapes_lrc35171 1 1 serine proteinase 0 0 n n n ruditapes_lrc35175 1 1 0 0 n n n ruditapes_lrc35185 1 1 elegans protein partially confirmed by transcript evidence 0 0 n n n ruditapes_lrc35191 1 1 0 0 n n n ruditapes_lrc35202 1 1 leucine rich repeat containing 59 /// 0044444 // cytoplasmic part /// 0043231 // intracellular membrane-bounded organelle /// 0016020 // membrane 0 0 n n n ruditapes_lrc35206 1 1 0 0 n n n ruditapes_lrc35211 1 1 0 0 n n n ruditapes_lrc35223 1 1 0 0 n n n ruditapes_lrc35231 1 1 0 0 n n n ruditapes_lrc35235 1 1 0 0 n n n ruditapes_lrc35390 1 1 0 0 n n n ruditapes_lrc35436 1 1 0 0 n n n ruditapes_lrc35445 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_lrc35454 1 1 0 0 n n n ruditapes_lrc35468 1 1 ribosomal protein l4 /// 0006414 // translational elongation /// 0005515 // protein binding /// 0022625 // cytosolic large ribosomal subunit /// 0003723 // RNA binding /// 0003735 // structural constituent of ribosome 0 0 n n n ruditapes_lrc35471 1 1 0 0 n n n ruditapes_lrc35472 1 1 0 0 n n n ruditapes_lrc35473 1 1 0 0 n n n ruditapes_lrc35476 1 1 lysozyme /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc35537 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc35571 1 1 metal-binding protein 0 0 n n n ruditapes_lrc35590 1 1 0 0 n n n ruditapes_lrc35632 1 1 0 0 n n n ruditapes_lrc35646 1 1 0 0 n n n ruditapes_lrc35653 1 1 0 0 n n n ruditapes_lrc35675 1 1 0 0 n n n ruditapes_lrc35677 1 1 0 0 n n n ruditapes_lrc35700 1 1 protein 0 0 n n n ruditapes_lrc35718 1 1 0 0 n n n ruditapes_lrc35723 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc35727 1 1 0 0 n n n ruditapes_lrc35738 1 1 nadh dehydrogenase 1 alpha subcomplex subunit 5 /// 0005739 // mitochondrion /// 0016020 // membrane 0 0 n n n ruditapes_lrc35763 1 1 0 0 n n n ruditapes_lrc35783 1 1 c-type lectin /// 0005488 // binding 0 0 n n n ruditapes_lrc35808 1 1 0 0 n n n ruditapes_lrc35818 1 1 0 0 n n n ruditapes_lrc35850 1 1 unknown protein 9 [Haliotis diversicolor] 0 0 n n n ruditapes_lrc35854 1 1 0 0 n n n ruditapes_lrc35855 1 1 0 0 n n n ruditapes_lrc35860 1 1 0 0 n n n ruditapes_lrc35872 1 1 0 0 n n n ruditapes_lrc35879 1 1 0 0 n n n ruditapes_lrc35883 1 1 0 0 n n n ruditapes_lrc35918 1 1 0 0 n n n ruditapes_lrc35920 1 1 lysozyme "/// 0042742 // defense response to bacterium /// 0016798 // hydrolase activity, acting on glycosyl bonds" 0 0 n n n ruditapes_lrc35952 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_lrc35956 1 1 0 0 n n n ruditapes_lrc35989 1 1 cg3621 cg3621-pa 0 0 n n n ruditapes_lrc36004 1 1 0 0 n n n ruditapes_lrc36017 1 1 0 0 n n n ruditapes_lrc36045 1 1 0 0 n n n ruditapes_lrc36048 1 1 0 0 n n n ruditapes_lrc36078 1 1 0 0 n n n ruditapes_lrc36109 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc36112 1 1 glutathione s-transferase /// 0005515 // protein binding 0 0 n n n ruditapes_lrc36119 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_lrc36123 1 1 0 0 n n n ruditapes_lrc36124 1 1 0 0 n n n ruditapes_lrc36169 1 1 0 0 n n n ruditapes_lrc36181 1 1 0 0 n n n ruditapes_lrc36196 1 1 cytochrome c oxidase subunit vib isoform 1 /// 0005739 // mitochondrion 0 0 n n n ruditapes_lrc36256 1 1 acyl carrier protein "/// 0005759 // mitochondrial matrix /// 0006633 // fatty acid biosynthetic process /// 0000036 // acyl carrier activity /// 0006120 // mitochondrial electron transport, NADH to ubiquinone /// 0005504 // fatty acid binding /// 0008137 // NADH dehydrogenase (ubiquinone) activity /// 0005747 // mitochondrial respiratory chain complex I /// 0005509 // calcium ion binding /// 0031177 // phosphopantetheine binding /// 0048037 // cofactor binding" 0 0 n n n ruditapes_lrc36263 1 1 protein 0 0 n n n ruditapes_lrc36285 1 1 0 0 n n n ruditapes_lrc36291 1 1 0 0 n n n ruditapes_lrc36315 1 1 transmembrane protein 0 0 n n n ruditapes_lrc36330 1 1 0 0 n n n ruditapes_lrc36357 1 1 0 0 n n n ruditapes_lrc36362 1 1 0 0 n n n ruditapes_lrc36398 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_lrc36400 1 1 0 0 n n n ruditapes_lrc36406 1 1 0 0 n n n ruditapes_lrc36410 1 1 0 0 n n n ruditapes_lrc36423 1 1 0 0 n n n ruditapes_lrc36425 1 1 0 0 n n n ruditapes_lrc36431 1 1 tempt_aplca ame: full=temptin flags: precursor 0 0 n n n ruditapes_lrc36460 1 1 0 0 n n n ruditapes_lrc36500 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc36504 1 1 lysozyme /// 0042742 // defense response to bacterium /// 0016787 // hydrolase activity 0 0 n n n ruditapes_lrc36524 1 1 0 0 n n n ruditapes_lrc36603 1 1 0 0 n n n ruditapes_lrc36614 1 1 0 0 n n n ruditapes_lrc36628 1 1 0 0 n n n ruditapes_lrc36657 1 1 0 0 n n n ruditapes_lrc36675 1 1 tandem repeat galectin 0 0 n n n ruditapes_lrc36702 1 1 0 0 n n n ruditapes_lrc36703 1 1 0 0 n n n ruditapes_lrc36728 1 1 cytochrome c oxidase subunit va 0 0 n n n ruditapes_lrc36732 1 1 0 0 n n n ruditapes_lrc36739 1 1 hypothetical protein BRAFLDRAFT_72548 [Branchiostoma floridae] 0 0 n n n ruditapes_lrc36752 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_lrc36776 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc36810 1 1 mantle gene 4 0 0 n n n ruditapes_lrc36818 1 1 unknown protein 7 [Haliotis diversicolor] 0 0 n n n ruditapes_lrc36823 1 1 0 0 n n n ruditapes_lrc36877 1 1 protein /// 0005488 // binding 0 0 n n n ruditapes_lrc36889 1 1 0 0 n n n ruditapes_lrc36904 1 1 0 0 n n n ruditapes_lrc36905 1 1 unknown protein 7 [Haliotis diversicolor] 0 0 n n n ruditapes_lrc36918 1 1 glutathione s-transferase /// 0005515 // protein binding 0 0 n n n ruditapes_lrc36924 1 1 protein /// 0005488 // binding 0 0 n n n ruditapes_lrc36936 1 1 0 0 n n n ruditapes_lrc36952 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0005901 // caveola /// 0048519 // negative regulation of biological process /// 0043231 // intracellular membrane-bounded organelle /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0016044 // membrane organization /// 0051179 // localization /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0001756 // somitogenesis /// 0043086 // negative regulation of catalytic activity /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc37063 1 1 0 0 n n n ruditapes_lrc37132 1 1 protein 0 0 n n n ruditapes_lrc37161 1 1 nucleoside diphosphate kinase /// 0005488 // binding /// 0009117 // nucleotide metabolic process 0 0 n n n ruditapes_lrc37248 1 1 0 0 n n n ruditapes_lrc37298 1 1 lysozyme /// 0006952 // defense response /// 0003824 // catalytic activity 0 0 n n n ruditapes_lrc37348 1 1 hypothetical protein [Mercenaria mercenaria] 0 0 n n n ruditapes_lrc37378 1 1 0 0 n n n ruditapes_lrc37417 1 1 0 0 n n n ruditapes_lrc37495 1 1 0 0 n n n ruditapes_lrc37496 1 1 0 0 n n n ruditapes_lrc37601 1 1 0 0 n n n ruditapes_lrc37610 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_lrc37615 1 1 0 0 n n n ruditapes_lrc37681 1 1 0 0 n n n ruditapes_lrc37727 1 1 0 0 n n n ruditapes_lrc37753 1 1 0 0 n n n ruditapes_lrc37804 1 1 caveolin 3 /// 0030299 // intestinal cholesterol absorption /// 0007520 // myoblast fusion /// 0001756 // somitogenesis /// 0045214 // sarcomere organization /// 0042383 // sarcolemma /// 0060036 // notochord cell vacuolation /// 0007507 // heart development /// 0042693 // muscle cell fate commitment /// 0048884 // neuromast development 0 0 n n n ruditapes_lrc37829 1 1 0 0 n n n ruditapes_lrc37850 1 1 mitochondrial ubiquinol-cytochrome c reductase hinge protein "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0005750 // mitochondrial respiratory chain complex III /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0 0 n n n ruditapes_lrc37884 1 1 sialic acid-binding lectin 0 0 n n n ruditapes_lrc37945 1 1 mgc64417 protein /// 0016787 // hydrolase activity 0 0 n n n ruditapes_lrc37958 1 1 0 0 n n n ruditapes_lrc38039 1 1 c inesis defect family member (cyk-1) 0 0 n n n ruditapes_lrc38189 1 1 dicarbonyl l-xylulose reductase /// 0005975 // carbohydrate metabolic process /// 0044237 // cellular metabolic process /// 0016491 // oxidoreductase activity /// 0044464 // cell part 0 0 n n n ruditapes_lrc38214 1 1 0 0 n n n ruditapes_lrc38228 1 1 0 0 n n n ruditapes_lrc38243 1 1 0 0 n n n ruditapes_lrc38245 1 1 0 0 n n n ruditapes_lrc38252 1 1 0 0 n n n ruditapes_lrc38277 1 1 0 0 n n n ruditapes_lrc38296 1 1 0 0 n n n ruditapes_lrc38324 1 1 0 0 n n n ruditapes_lrc38325 1 1 tempt_aplca ame: full=temptin flags: precursor 0 0 n n n ruditapes_lrc38349 1 1 0 0 n n n ruditapes_lrc38357 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes_lrc38362 1 1 0 0 n n n ruditapes_lrc38405 1 1 0 0 n n n ruditapes_lrc38413 1 1 0 0 n n n ruditapes_lrc38423 1 1 0 0 n n n ruditapes_lrc38457 1 1 0 0 n n n ruditapes_lrc38461 1 1 0 0 n n n ruditapes_lrc38462 1 1 0 0 n n n ruditapes_lrc38492 1 1 0 0 n n n ruditapes_lrc38517 1 1 0 0 n n n ruditapes_lrc38526 1 1 0 0 n n n ruditapes_lrc38558 1 1 caveolin 3 0 0 n n n ruditapes_lrc38579 1 1 methyltransferase type 11 0 0 n n n ruditapes_lrc38589 1 1 0 0 n n n ruditapes_lrc38603 1 1 0 0 n n n ruditapes_lrc38633 1 1 0 0 n n n ruditapes_lrc38648 1 1 0 0 n n n ruditapes_lrc38663 1 1 0 0 n n n ruditapes_lrc38709 1 1 0 0 n n n ruditapes_lrc38711 1 1 0 0 n n n ruditapes_lrc38726 1 1 dopamine beta hydroxylase-like protein 0 0 n n n ruditapes_lrc38732 1 1 complement component q subcomponent-like 4 0 0 n n n ruditapes_lrc38792 1 1 hypothetical protein BRAFLDRAFT_125501 [Branchiostoma floridae] 0 0 n n n ruditapes_lrc38890 1 1 secretory protein loc348174 precursor /// 0005488 // binding 0 0 n n n ruditapes_lrc38894 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_lrc38964 1 1 0 0 n n n ruditapes_lrc38987 1 1 tandem repeat galectin 0 0 n n n ruditapes_lrc39009 1 1 0 0 n n n ruditapes_lrc39074 1 1 tandem repeat galectin 0 0 n n n ruditapes_lrc39087 1 1 0 0 n n n ruditapes_lrc39106 1 1 0 0 n n n ruditapes_lrc39163 1 1 serine proteinase 0 0 n n n ruditapes_lrc39167 1 1 0 0 n n n ruditapes_lrc39194 1 1 0 0 n n n ruditapes_lrc39198 1 1 0 0 n n n ruditapes_lrc39205 1 1 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0 0 n n n ruditapes_lrc39242 1 1 0 0 n n n ruditapes_lrc39252 1 1 trypsin-like proteinase /// 0008236 // serine-type peptidase activity 0 0 n n n ruditapes_lrc39319 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_lrc39430 1 1 tenascin r ( janusin) /// 0009987 // cellular process 0 0 n n n ruditapes_lrc39435 1 1 0 0 n n n ruditapes_lrc39530 1 1 0 0 n n n ruditapes_lrc39545 1 1 protein 0 0 n n n ruditapes_lrc39601 1 1 PREDICTED: similar to MEGF6 [Strongylocentrotus purpuratus] 0 0 n n n ruditapes_lrc39609 1 1 0 0 n n n ruditapes_lrc39652 1 1 small nuclear ribonucleoprotein e /// 0000245 // spliceosome assembly /// 0030532 // small nuclear ribonucleoprotein complex /// 0005681 // spliceosomal complex /// 0005515 // protein binding /// 0005654 // nucleoplasm /// 0005829 // cytosol /// 0003723 // RNA binding /// 0000387 // spliceosomal snRNP biogenesis 0 0 n n n ruditapes_lrc39712 1 1 sialic acid binding lectin 0 0 n n n ruditapes_lrc39780 1 1 0 0 n n n ruditapes_lrc39818 1 1 0 0 n n n ruditapes_lrc40050 1 1 0 0 n n n ruditapes_lrc40100 1 1 0 0 n n n ruditapes_lrc40300 1 1 0 0 n n n ruditapes_lrc6819 1 1 0 0 n n n ruditapes_lrc6829 1 1 0 0 n n n ruditapes_lrc6865 1 1 0 0 n n n ruditapes_lrc6880 1 1 prophage dlp12 integrase 0 0 n n n ruditapes_lrc6888 1 1 0 0 n n n ruditapes_lrc6902 1 1 0 0 n n n ruditapes_lrc6940 1 1 0 0 n n n ruditapes_lrc6993 1 1 protein 0 0 n n n ruditapes_lrc7026 1 1 0 0 n n n ruditapes_lrc7184 1 1 0 0 n n n ruditapes_lrc7221 1 1 0 0 n n n ruditapes_lrc7397 1 1 0 0 n n n ruditapes_lrc7726 1 1 0 0 n n n ruditapes_lrc7991 1 1 0 0 n n n ruditapes_lrc8001 1 1 0 0 n n n ruditapes_lrc8204 1 1 0 0 n n n ruditapes_lrc8505 1 1 0 0 n n n ruditapes_lrc8567 1 1 0 0 n n n ruditapes_lrc8627 1 1 0 0 n n n ruditapes_lrc8841 1 1 0 0 n n n ruditapes_lrc8887 1 1 serine proteinase 0 0 n n n ruditapes_lrc9232 1 1 0 0 n n n ruditapes_lrc9396 1 1 0 0 n n n ruditapes_lrc9546 1 1 cg6329- isoform c 0 0 n n n ruditapes_lrc9922 1 1 0 0 n n n ruditapes_s25210 1 1 0 0 n n n ruditapes_s32258 1 1 sialic acid binding lectin 0 0 n n n ruditapes_s32331 1 1 0 0 n n n ruditapes_s32410 1 1 lysozyme [Venerupis philippinarum] 0 0 n n n ruditapes_s32503 1 1 0 0 n n n ruditapes_s32555 1 1 dicarbonyl l-xylulose reductase 0 0 n n n ruditapes_s32586 1 1 0 0 n n n ruditapes_s32761 1 1 0 0 n n n ruditapes_s32802 1 1 0 0 n n n ruditapes_s32921 1 1 0 0 n n n ruditapes_s32945 1 1 0 0 n n n ruditapes_s32970 1 1 0 0 n n n ruditapes_s33050 1 1 0 0 n n n ruditapes_s33108 1 1 0 0 n n n ruditapes_s33136 1 1 0 0 n n n ruditapes_s33164 1 1 ribosomal protein l21 0 0 n n n ruditapes_s33196 1 1 0 0 n n n ruditapes_s33200 1 1 0 0 n n n ruditapes_s33205 1 1 PREDICTED: similar to predicted protein [Hydra magnipapillata] 0 0 n n n ruditapes_s33210 1 1 0 0 n n n ruditapes_s33238 1 1 0 0 n n n ruditapes_s33245 1 1 0 0 n n n ruditapes_s33264 1 1 0 0 n n n ruditapes_s33317 1 1 0 0 n n n ruditapes_s33340 1 1 0 0 n n n ruditapes_s33345 1 1 0 0 n n n ruditapes_s33347 1 1 0 0 n n n ruditapes_s33367 1 1 0 0 n n n ruditapes_s33462 1 1 dicarbonyl l-xylulose reductase "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005996 // monosaccharide metabolic process /// 0044464 // cell part" 0 0 n n n ruditapes_s33465 1 1 developmentally-regulated vdg3 0 0 n n n ruditapes_s33467 1 1 0 0 n n n ruditapes_s33470 1 1 0 0 n n n ruditapes_s33508 1 1 0 0 n n n ruditapes_s33525 1 1 0 0 n n n ruditapes_s33621 1 1 0 0 n n n ruditapes_s33716 1 1 0 0 n n n ruditapes_s33800 1 1 0 0 n n n ruditapes_s33819 1 1 signal transduction protein with efhand domain 0 0 n n n ruditapes_s33894 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_s33920 1 1 0 0 n n n ruditapes_s33922 1 1 0 0 n n n ruditapes_s33973 1 1 0 0 n n n ruditapes_s34012 1 1 0 0 n n n ruditapes_s34044 1 1 0 0 n n n ruditapes_s34047 1 1 0 0 n n n ruditapes_s34094 1 1 af320565_1cathepsine l-like cysteine protease 0 0 n n n ruditapes_s34133 1 1 0 0 n n n ruditapes_s34176 1 1 0 0 n n n ruditapes_s34297 1 1 0 0 n n n ruditapes_s34467 1 1 methyltransferase type 12 0 0 n n n ruditapes_s34502 1 1 0 0 n n n ruditapes_s34517 1 1 0 0 n n n ruditapes_s34593 1 1 0 0 n n n ruditapes_s34790 1 1 0 0 n n n ruditapes_s34828 1 1 0 0 n n n ruditapes_s34837 1 1 0 0 n n n ruditapes_s34847 1 1 0 0 n n n ruditapes_s34930 1 1 protein 0 0 n n n ruditapes_s34963 1 1 0 0 n n n ruditapes_s34964 1 1 0 0 n n n ruditapes_s35000 1 1 0 0 n n n ruditapes_s35104 1 1 predicted protein [Nematostella vectensis] 0 0 n n n ruditapes_s35106 1 1 0 0 n n n ruditapes_s35149 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0044444 // cytoplasmic part /// 0005902 // microvillus /// 0043231 // intracellular membrane-bounded organelle /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_s35192 1 1 0 0 n n n ruditapes_s35216 1 1 0 0 n n n ruditapes_s35226 1 1 0 0 n n n ruditapes_s35228 1 1 0 0 n n n ruditapes_s35303 1 1 0 0 n n n ruditapes_s35330 1 1 0 0 n n n ruditapes_s35352 1 1 0 0 n n n ruditapes_s35363 1 1 0 0 n n n ruditapes_s35378 1 1 0 0 n n n ruditapes_s35440 1 1 0 0 n n n ruditapes_s35474 1 1 0 0 n n n ruditapes_s35541 1 1 0 0 n n n ruditapes_s35565 1 1 0 0 n n n ruditapes_s35609 1 1 0 0 n n n ruditapes_s35620 1 1 0 0 n n n ruditapes_s35621 1 1 0 0 n n n ruditapes_s35661 1 1 0 0 n n n ruditapes_s35664 1 1 0 0 n n n ruditapes_s35733 1 1 0 0 n n n ruditapes_s35743 1 1 0 0 n n n ruditapes_s35824 1 1 0 0 n n n ruditapes_s35892 1 1 0 0 n n n ruditapes_s35926 1 1 ef hand family protein 0 0 n n n ruditapes_s35939 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_s35959 1 1 0 0 n n n ruditapes_s35967 1 1 0 0 n n n ruditapes_s35982 1 1 myc homolog 0 0 n n n ruditapes_s35988 1 1 prophage dlp12 integrase /// 0006259 // DNA metabolic process /// 0008979 // prophage integrase activity 0 0 n n n ruditapes_s36021 1 1 0 0 n n n ruditapes_s36033 1 1 0 0 n n n ruditapes_s36051 1 1 0 0 n n n ruditapes_s36077 1 1 methyltransferase type 11 0 0 n n n ruditapes_s36110 1 1 0 0 n n n ruditapes_s36113 1 1 0 0 n n n ruditapes_s36139 1 1 0 0 n n n ruditapes_s36171 1 1 0 0 n n n ruditapes_s36177 1 1 lysozyme /// 0005576 // extracellular region /// 0050829 // defense response to Gram-negative bacterium /// 0050830 // defense response to Gram-positive bacterium /// 0003796 // lysozyme activity 0 0 n n n ruditapes_s36184 1 1 small nuclear ribonucleoprotein g "/// 0000245 // spliceosome assembly /// 0051236 // establishment of RNA localization /// 0005681 // spliceosomal complex /// 0003730 // mRNA 3'-UTR binding /// 0000289 // nuclear-transcribed mRNA poly(A) tail shortening /// 0005515 // protein binding /// 0000184 // nuclear-transcribed mRNA catabolic process, nonsense-mediated decay /// 0031202 // RNA splicing factor activity, transesterification mechanism /// 0043488 // regulation of mRNA stability /// 0016310 // phosphorylation /// 0000900 // translation repressor activity, nucleic acid binding /// 0035195 // gene silencing by miRNA /// 0005737 // cytoplasm /// 0004672 // protein kinase activity /// 0017148 // negative regulation of translation /// 0016246 // RNA interference /// 0007052 // mitotic spindle organization" 0 0 n n n ruditapes_s36203 1 1 0 0 n n n ruditapes_s36221 1 1 caveolin 3 /// 0030315 // T-tubule /// 0032403 // protein complex binding /// 0007009 // plasma membrane organization /// 0017080 // sodium channel regulator activity /// 0060307 // regulation of ventricular cardiomyocyte membrane repolarization /// 0043409 // negative regulation of MAPKKK cascade /// 0010614 // negative regulation of cardiac muscle hypertrophy /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0060299 // negative regulation of sarcomere organization /// 0043231 // intracellular membrane-bounded organelle /// 0016010 // dystrophin-associated glycoprotein complex /// 0006641 // triglyceride metabolic process /// 0031116 // positive regulation of microtubule polymerization /// 0006897 // endocytosis /// 0016049 // cell growth /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0016021 // integral to membrane /// 0045792 // negative regulation of cell size /// 0043407 // negative regulation of MAP kinase activity /// 0042593 // glucose homeostasis /// 0009986 // cell surface /// 0031579 // membrane raft organization /// 0008022 // protein C-terminus binding /// 0046716 // muscle maintenance /// 0014819 // regulation of skeletal muscle contraction /// 0007204 // elevation of cytosolic calcium ion concentration /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding 0 0 n n n ruditapes_s36226 1 1 0 0 n n n ruditapes_s36250 1 1 0 0 n n n ruditapes_s36268 1 1 0 0 n n n ruditapes_s36309 1 1 0 0 n n n ruditapes_s36311 1 1 0 0 n n n ruditapes_s36313 1 1 0 0 n n n ruditapes_s36320 1 1 0 0 n n n ruditapes_s36340 1 1 0 0 n n n ruditapes_s36347 1 1 0 0 n n n ruditapes_s36359 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_s36361 1 1 0 0 n n n ruditapes_s36378 1 1 0 0 n n n ruditapes_s36379 1 1 0 0 n n n ruditapes_s36414 1 1 0 0 n n n ruditapes_s36422 1 1 0 0 n n n ruditapes_s36528 1 1 0 0 n n n ruditapes_s36566 1 1 0 0 n n n ruditapes_s36579 1 1 0 0 n n n ruditapes_s36590 1 1 0 0 n n n ruditapes_s36599 1 1 0 0 n n n ruditapes_s36609 1 1 0 0 n n n ruditapes_s36701 1 1 0 0 n n n ruditapes_s36706 1 1 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0 n n n ruditapes_s36735 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_s36741 1 1 0 0 n n n ruditapes_s36764 1 1 0 0 n n n ruditapes_s36765 1 1 0 0 n n n ruditapes_s36814 1 1 f-type h+-transporting atpase subunit f 0 0 n n n ruditapes_s36819 1 1 0 0 n n n ruditapes_s36820 1 1 0 0 n n n ruditapes_s36821 1 1 0 0 n n n ruditapes_s36825 1 1 glutathione s-transferase (gst class-sigma) (major allergen bla g 5) 0 0 n n n ruditapes_s36832 1 1 0 0 n n n ruditapes_s36836 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_s36872 1 1 galactoside- 3 0 0 n n n ruditapes_s36895 1 1 0 0 n n n ruditapes_s36897 1 1 0 0 n n n ruditapes_s36899 1 1 0 0 n n n ruditapes_s36901 1 1 0 0 n n n ruditapes_s36925 1 1 0 0 n n n ruditapes_s36929 1 1 0 0 n n n ruditapes_s36935 1 1 ribosomal protein s7 0 0 n n n ruditapes_s36962 1 1 0 0 n n n ruditapes_s36976 1 1 calponin-like protein 0 0 n n n ruditapes_s37011 1 1 glutathione s-transferase c 0 0 n n n ruditapes_s37013 1 1 0 0 n n n ruditapes_s37022 1 1 0 0 n n n ruditapes_s37033 1 1 cellular retinoic acid binding protein 0 0 n n n ruditapes_s37050 1 1 0 0 n n n ruditapes_s37084 1 1 0 0 n n n ruditapes_s37088 1 1 0 0 n n n ruditapes_s37104 1 1 0 0 n n n ruditapes_s37141 1 1 0 0 n n n ruditapes_s37143 1 1 serine proteinase 0 0 n n n ruditapes_s37148 1 1 0 0 n n n ruditapes_s37179 1 1 0 0 n n n ruditapes_s37183 1 1 0 0 n n n ruditapes_s37213 1 1 tandem repeat galectin 0 0 n n n ruditapes_s37222 1 1 0 0 n n n ruditapes_s37244 1 1 0 0 n n n ruditapes_s37253 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_s37260 1 1 sec61p gamma subunit /// 0044425 // membrane part /// 0015031 // protein transport /// 0005783 // endoplasmic reticulum 0 0 n n n ruditapes_s37275 1 1 0 0 n n n ruditapes_s37300 1 1 0 0 n n n ruditapes_s37303 1 1 caveolin 3 /// 0044425 // membrane part /// 0065009 // regulation of molecular function /// 0030154 // cell differentiation /// 0044057 // regulation of system process /// 0005886 // plasma membrane /// 0005515 // protein binding /// 0003012 // muscle system process /// 0016044 // membrane organization /// 0048513 // organ development /// 0048878 // chemical homeostasis /// 0005737 // cytoplasm /// 0051128 // regulation of cellular component organization /// 0019725 // cellular homeostasis 0 0 n n n ruditapes_s37323 1 1 0 0 n n n ruditapes_s37325 1 1 0 0 n n n ruditapes_s37360 1 1 dicarbonyl l-xylulose reductase /// 0005975 // carbohydrate metabolic process /// 0044237 // cellular metabolic process /// 0003824 // catalytic activity 0 0 n n n ruditapes_s37365 1 1 0 0 n n n ruditapes_s37381 1 1 0 0 n n n ruditapes_s37383 1 1 0 0 n n n ruditapes_s37413 1 1 0 0 n n n ruditapes_s37414 1 1 0 0 n n n ruditapes_s37419 1 1 0 0 n n n ruditapes_s37440 1 1 0 0 n n n ruditapes_s37446 1 1 0 0 n n n ruditapes_s37457 1 1 0 0 n n n ruditapes_s37469 1 1 0 0 n n n ruditapes_s37482 1 1 0 0 n n n ruditapes_s37504 1 1 0 0 n n n ruditapes_s37512 1 1 achain crystal structure of tapes japonica lysozyme /// 0003796 // lysozyme activity 0 0 n n n ruditapes_s37517 1 1 0 0 n n n ruditapes_s37538 1 1 0 0 n n n ruditapes_s37540 1 1 0 0 n n n ruditapes_s37544 1 1 0 0 n n n ruditapes_s37550 1 1 0 0 n n n ruditapes_s37555 1 1 0 0 n n n ruditapes_s37566 1 1 0 0 n n n ruditapes_s37567 1 1 galactoside- 3 /// 0005634 // nucleus /// 0005515 // protein binding /// 0030198 // extracellular matrix organization /// 0001501 // skeletal system development /// 0005737 // cytoplasm /// 0005578 // proteinaceous extracellular matrix 0 0 n n n ruditapes_s37580 1 1 0 0 n n n ruditapes_s37581 1 1 translocon-associated protein subunit gamma /// 0044464 // cell part 0 0 n n n ruditapes_s37591 1 1 glutathione s-transferase /// 0005515 // protein binding 0 0 n n n ruditapes_s37597 1 1 0 0 n n n ruditapes_s37602 1 1 0 0 n n n ruditapes_s37611 1 1 0 0 n n n ruditapes_s37614 1 1 0 0 n n n ruditapes_s37618 1 1 angiopoietin-like 2 0 0 n n n ruditapes_s37645 1 1 ribosomal protein l21 /// 0005811 // lipid particle /// 0000022 // mitotic spindle elongation 0 0 n n n ruditapes_s37667 1 1 0 0 n n n ruditapes_s37670 1 1 0 0 n n n ruditapes_s37671 1 1 0 0 n n n ruditapes_s37672 1 1 0 0 n n n ruditapes_s37688 1 1 0 0 n n n ruditapes_s37691 1 1 0 0 n n n ruditapes_s37692 1 1 lysozyme 0 0 n n n ruditapes_s37707 1 1 0 0 n n n ruditapes_s37737 1 1 0 0 n n n ruditapes_s37762 1 1 0 0 n n n ruditapes_s37790 1 1 0 0 n n n ruditapes_s37803 1 1 0 0 n n n ruditapes_s37805 1 1 0 0 n n n ruditapes_s37840 1 1 0 0 n n n ruditapes_s37844 1 1 0 0 n n n ruditapes_s37852 1 1 0 0 n n n ruditapes_s37853 1 1 0 0 n n n ruditapes_s37857 1 1 0 0 n n n ruditapes_s37880 1 1 cytochrome b-c1 complex subunit mitochondrial precursor "/// 0006122 // mitochondrial electron transport, ubiquinol to cytochrome c /// 0040010 // positive regulation of growth rate /// 0008121 // ubiquinol-cytochrome-c reductase activity" 0 0 n n n ruditapes_s37881 1 1 0 0 n n n ruditapes_s37883 1 1 0 0 n n n ruditapes_s37885 1 1 unnamed protein product [Tetraodon nigroviridis] 0 0 n n n ruditapes_s37886 1 1 glutathione s-transferase /// 0005515 // protein binding 0 0 n n n ruditapes_s37891 1 1 0 0 n n n ruditapes_s37906 1 1 0 0 n n n ruditapes_s37907 1 1 nadh dehydrogenase iron-sulfur protein 5 0 0 n n n ruditapes_s37922 1 1 0 0 n n n ruditapes_s37923 1 1 0 0 n n n ruditapes_s37924 1 1 40s ribosomal protein s2 0 0 n n n ruditapes_s37930 1 1 glutathione s-transferase 0 0 n n n ruditapes_s37948 1 1 protein kinase c inhibitor aswz variant 5 /// 0003824 // catalytic activity /// 0044424 // intracellular part 0 0 n n n ruditapes_s37950 1 1 0 0 n n n ruditapes_s37959 1 1 0 0 n n n ruditapes_s37964 1 1 0 0 n n n ruditapes_s37969 1 1 0 0 n n n ruditapes_s37976 1 1 0 0 n n n ruditapes_s37979 1 1 0 0 n n n ruditapes_s37986 1 1 0 0 n n n ruditapes_s37992 1 1 serine protease cfsp3 0 0 n n n ruditapes_s38004 1 1 0 0 n n n ruditapes_s38005 1 1 protein 0 0 n n n ruditapes_s38013 1 1 ependymin related protein-1 precursor 0 0 n n n ruditapes_s38016 1 1 0 0 n n n ruditapes_s38025 1 1 0 0 n n n ruditapes_s38029 1 1 0 0 n n n ruditapes_s38041 1 1 0 0 n n n ruditapes_s38044 1 1 0 0 n n n ruditapes_s38046 1 1 0 0 n n n ruditapes_s38065 1 1 0 0 n n n ruditapes_s38080 1 1 0 0 n n n ruditapes_s38084 1 1 0 0 n n n ruditapes_s38093 1 1 0 0 n n n ruditapes_s38111 1 1 0 0 n n n ruditapes_s38129 1 1 0 0 n n n ruditapes_s38133 1 1 dicarbonyl l-xylulose reductase "/// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005488 // binding /// 0019321 // pentose metabolic process /// 0042995 // cell projection" 0 0 n n n ruditapes_s38137 1 1 0 0 n n n ruditapes_s38145 1 1 0 0 n n n ruditapes_s38180 1 1 0 0 n n n ruditapes_s38202 1 1 0 0 n n n ruditapes_s38205 1 1 0 0 n n n ruditapes_s38211 1 1 zona pellucida c 0 0 n n n ruditapes_s38226 1 1 0 0 n n n ruditapes_s38229 1 1 0 0 n n n ruditapes_s38235 1 1 0 0 n n n ruditapes_s38236 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0016740 // transferase activity 0 0 n n n ruditapes_s38241 1 1 tempt_aplca ame: full=temptin flags: precursor 0 0 n n n ruditapes_s38247 1 1 0 0 n n n ruditapes_s38259 1 1 0 0 n n n ruditapes_s38265 1 1 0 0 n n n ruditapes_s38272 1 1 0 0 n n n ruditapes_s38280 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_s38318 1 1 0 0 n n n ruditapes_s38330 1 1 0 0 n n n ruditapes_s38345 1 1 0 0 n n n ruditapes_s38352 1 1 0 0 n n n ruditapes_s38369 1 1 0 0 n n n ruditapes_s38384 1 1 0 0 n n n ruditapes_s38394 1 1 0 0 n n n ruditapes_s38398 1 1 0 0 n n n ruditapes_s38402 1 1 0 0 n n n ruditapes_s38411 1 1 0 0 n n n ruditapes_s38412 1 1 0 0 n n n ruditapes_s38418 1 1 0 0 n n n ruditapes_s38448 1 1 0 0 n n n ruditapes_s38473 1 1 0 0 n n n ruditapes_s38480 1 1 0 0 n n n ruditapes_s38483 1 1 0 0 n n n ruditapes_s38489 1 1 0 0 n n n ruditapes_s38503 1 1 0 0 n n n ruditapes_s38508 1 1 0 0 n n n ruditapes_s38515 1 1 0 0 n n n ruditapes_s38527 1 1 0 0 n n n ruditapes_s38530 1 1 0 0 n n n ruditapes_s38536 1 1 0 0 n n n ruditapes_s38555 1 1 0 0 n n n ruditapes_s38559 1 1 methyltransferase type 11 0 0 n n n ruditapes_s38568 1 1 dicarbonyl l-xylulose reductase "/// 0006739 // NADP metabolic process /// 0016614 // oxidoreductase activity, acting on CH-OH group of donors /// 0005902 // microvillus /// 0005515 // protein binding /// 0005903 // brush border /// 0005997 // xylulose metabolic process" 0 0 n n n ruditapes_s38577 1 1 0 0 n n n ruditapes_s38587 1 1 achain crystal structure of tapes japonica lysozyme 0 0 n n n ruditapes_s38593 1 1 0 0 n n n ruditapes_s38599 1 1 0 0 n n n ruditapes_s38607 1 1 0 0 n n n ruditapes_s38620 1 1 0 0 n n n ruditapes_s38637 1 1 0 0 n n n ruditapes_s38649 1 1 0 0 n n n ruditapes_s38662 1 1 0 0 n n n ruditapes_s38702 1 1 0 0 n n n ruditapes_s38733 1 1 methyltransferase type 12 0 0 n n n ruditapes_s38744 1 1 0 0 n n n ruditapes_s38757 1 1 0 0 n n n ruditapes_s38788 1 1 0 0 n n n ruditapes_s38798 1 1 0 0 n n n ruditapes_s38810 1 1 0 0 n n n ruditapes_s38825 1 1 0 0 n n n ruditapes_s38837 1 1 0 0 n n n ruditapes_s38843 1 1 0 0 n n n ruditapes_s38844 1 1 0 0 n n n ruditapes_s38849 1 1 tempt_aplca ame: full=temptin flags: precursor 0 0 n n n ruditapes_s38901 1 1 0 0 n n n ruditapes_s38906 1 1 0 0 n n n ruditapes_s38909 1 1 0 0 n n n ruditapes_s38935 1 1 caveolin 3 /// 0030315 // T-tubule /// 0030299 // intestinal cholesterol absorption /// 0007009 // plasma membrane organization /// 0043409 // negative regulation of MAPKKK cascade /// 0005901 // caveola /// 0042632 // cholesterol homeostasis /// 0051001 // negative regulation of nitric-oxide synthase activity /// 0043231 // intracellular membrane-bounded organelle /// 0006641 // triglyceride metabolic process /// 0043234 // protein complex /// 0031116 // positive regulation of microtubule polymerization /// 0006469 // negative regulation of protein kinase activity /// 0006897 // endocytosis /// 0016049 // cell growth /// 0006942 // regulation of striated muscle contraction /// 0005625 // soluble fraction /// 0030018 // Z disc /// 0042598 // vesicular fraction /// 0032947 // protein complex scaffold /// 0008104 // protein localization /// 0001756 // somitogenesis /// 0042593 // glucose homeostasis /// 0008016 // regulation of heart contraction /// 0009986 // cell surface /// 0060036 // notochord cell vacuolation /// 0046716 // muscle maintenance /// 0007507 // heart development /// 0007204 // elevation of cytosolic calcium ion concentration /// 0042391 // regulation of membrane potential /// 0051925 // regulation of calcium ion transport via voltage-gated calcium channel activity /// 0031594 // neuromuscular junction /// 0019899 // enzyme binding /// 0048884 // neuromast development 0 0 n n n ruditapes_s38969 1 1 0 0 n n n ruditapes_s38971 1 1 0 0 n n n ruditapes_s38985 1 1 0 0 n n n ruditapes_s38996 1 1 0 0 n n n ruditapes_s38998 1 1 0 0 n n n ruditapes_s39037 1 1 tandem repeat galectin 0 0 n n n ruditapes_s39039 1 1 0 0 n n n ruditapes_s39051 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_s39067 1 1 0 0 n n n ruditapes_s39072 1 1 0 0 n n n ruditapes_s39079 1 1 0 0 n n n ruditapes_s39085 1 1 0 0 n n n ruditapes_s39104 1 1 0 0 n n n ruditapes_s39112 1 1 placenta-specific 8 0 0 n n n ruditapes_s39117 1 1 0 0 n n n ruditapes_s39127 1 1 0 0 n n n ruditapes_s39144 1 1 polcalcin phl p 7 (calcium-binding pollen allergen phl p 7) 0 0 n n n ruditapes_s39147 1 1 0 0 n n n ruditapes_s39151 1 1 0 0 n n n ruditapes_s39154 1 1 0 0 n n n ruditapes_s39166 1 1 0 0 n n n ruditapes_s39168 1 1 0 0 n n n ruditapes_s39178 1 1 0 0 n n n ruditapes_s39195 1 1 0 0 n n n ruditapes_s39200 1 1 0 0 n n n ruditapes_s39228 1 1 0 0 n n n ruditapes_s39233 1 1 0 0 n n n ruditapes_s39249 1 1 0 0 n n n ruditapes_s39266 1 1 0 0 n n n ruditapes_s39270 1 1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 /// 0016021 // integral to membrane /// 0016740 // transferase activity 0 0 n n n ruditapes_s39277 1 1 0 0 n n n ruditapes_s39278 1 1 0 0 n n n ruditapes_s39332 1 1 DEC-3 [Lymnaea stagnalis] 0 0 n n n ruditapes_s39339 1 1 leucine rich repeat containing 59 0 0 n n n ruditapes_s39363 1 1 0 0 n n n ruditapes_s39364 1 1 0 0 n n n ruditapes_s39366 1 1 0 0 n n n ruditapes_s39369 1 1 0 0 n n n ruditapes_s39378 1 1 dicarbonyl l-xylulose reductase /// 0044238 // primary metabolic process /// 0016491 // oxidoreductase activity /// 0044464 // cell part 0 0 n n n ruditapes_s39387 1 1 0 0 n n n ruditapes_s39395 1 1 cysteine and glycine-rich protein 1 /// 0048731 // system development /// 0005634 // nucleus /// 0015629 // actin cytoskeleton /// 0005515 // protein binding /// 0005737 // cytoplasm /// 0030036 // actin cytoskeleton organization /// 0008270 // zinc ion binding 0 0 n n n ruditapes_s39404 1 1 0 0 n n n ruditapes_s39432 1 1 0 0 n n n ruditapes_s39468 1 1 0 0 n n n ruditapes_s39470 1 1 cytochrome c oxidase subunit vib isoform 1 0 0 n n n ruditapes_s39473 1 1 0 0 n n n ruditapes_s39504 1 1 0 0 n n n ruditapes_s39513 1 1 0 0 n n n ruditapes_s39544 1 1 ribosomal protein s8e /// 0005622 // intracellular 0 0 n n n ruditapes_s39566 1 1 0 0 n n n ruditapes_s39582 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_s39593 1 1 0 0 n n n ruditapes_s39599 1 1 0 0 n n n ruditapes_s39604 1 1 0 0 n n n ruditapes_s39613 1 1 0 0 n n n ruditapes_s39637 1 1 0 0 n n n ruditapes_s39641 1 1 0 0 n n n ruditapes_s39646 1 1 0 0 n n n ruditapes_s39677 1 1 glutathione s-transferase /// 0005515 // protein binding /// 0004667 // prostaglandin-D synthase activity /// 0016740 // transferase activity /// 0007626 // locomotory behavior /// 0005737 // cytoplasm /// 0009987 // cellular process 0 0 n n n ruditapes_s39695 1 1 0 0 n n n ruditapes_s39697 1 1 0 0 n n n ruditapes_s39698 1 1 0 0 n n n ruditapes_s39726 1 1 0 0 n n n ruditapes_s39744 1 1 0 0 n n n ruditapes_s39762 1 1 0 0 n n n ruditapes_s39764 1 1 0 0 n n n ruditapes_s39765 1 1 0 0 n n n ruditapes_s39777 1 1 0 0 n n n ruditapes_s39781 1 1 0 0 n n n ruditapes_s39796 1 1 0 0 n n n ruditapes_s39813 1 1 0 0 n n n ruditapes_s39825 1 1 0 0 n n n ruditapes_s39826 1 1 elegans protein partially confirmed by transcript evidence 0 0 n n n ruditapes_s39831 1 1 0 0 n n n ruditapes_s39839 1 1 0 0 n n n ruditapes_s39841 1 1 elastase-like serine protease 0 0 n n n ruditapes_s39851 1 1 0 0 n n n ruditapes_s39852 1 1 0 0 n n n ruditapes_s39859 1 1 0 0 n n n ruditapes_s39862 1 1 0 0 n n n ruditapes_s39885 1 1 nucleoside diphosphate kinase /// 0009209 // pyrimidine ribonucleoside triphosphate biosynthetic process /// 0000166 // nucleotide binding /// 0016301 // kinase activity 0 0 n n n ruditapes_s39889 1 1 0 0 n n n ruditapes_s39905 1 1 glutathione s-transferase /// 0004364 // glutathione transferase activity /// 0005515 // protein binding 0 0 n n n ruditapes_s39906 1 1 0 0 n n n ruditapes_s39926 1 1 0 0 n n n ruditapes_s39927 1 1 caveolin 3 /// 0044464 // cell part 0 0 n n n ruditapes_s39931 1 1 sarcoplasmic calcium-binding protein 0 0 n n n ruditapes_s39936 1 1 0 0 n n n ruditapes_s39945 1 1 0 0 n n n ruditapes_s39947 1 1 0 0 n n n ruditapes_s39949 1 1 0 0 n n n ruditapes_s39988 1 1 0 0 n n n ruditapes_s39990 1 1 elastase-like serine protease 0 0 n n n ruditapes_s39997 1 1 hypothetical protein BRAFLDRAFT_246513 [Branchiostoma floridae] 0 0 n n n ruditapes_s40000 1 1 0 0 n n n ruditapes_s40009 1 1 0 0 n n n ruditapes_s40021 1 1 0 0 n n n ruditapes_s40036 1 1 0 0 n n n ruditapes_s40039 1 1 lysozyme /// 0006952 // defense response /// 0003824 // catalytic activity 0 0 n n n ruditapes_s40046 1 1 0 0 n n n ruditapes_s40054 1 1 glutathione s-transferase /// 0005515 // protein binding 0 0 n n n ruditapes_s40059 1 1 0 0 n n n ruditapes_s40061 1 1 0 0 n n n ruditapes_s40063 1 1 c-specific lectin 0 0 n n n ruditapes_s40073 1 1 thioredoxin domain containing 17 0 0 n n n ruditapes_s40090 1 1 0 0 n n n ruditapes_s40096 1 1 0 0 n n n ruditapes_s40109 1 1 0 0 n n n ruditapes_s40113 1 1 0 0 n n n ruditapes_s40122 1 1 briggsae cbr-gst- protein /// 0005515 // protein binding 0 0 n n n ruditapes_s40145 1 1 0 0 n n n ruditapes_s40154 1 1 hypothetical protein BRAFLDRAFT_89333 [Branchiostoma floridae] 0 0 n n n ruditapes_s40178 1 1 0 0 n n n ruditapes_s40179 1 1 hypothetical protein BRAFLDRAFT_117811 [Branchiostoma floridae] 0 0 n n n ruditapes_s40202 1 1 hypothetical protein BRAFLDRAFT_117811 [Branchiostoma floridae] 0 0 n n n ruditapes_s40217 1 1 0 0 n n n ruditapes_s40226 1 1 prostaglandin d synthase-like 0 0 n n n ruditapes_s40228 1 1 galactoside- 3 0 0 n n n ruditapes_s40232 1 1 0 0 n n n ruditapes_s40263 1 1 0 0 n n n ruditapes_s40271 1 1 glutathione s-transferase 0 0 n n n ruditapes_s40273 1 1 0 0 n n n ruditapes_s40278 1 1 0 0 n n n ruditapes_s40302 1 1 0 0 n n n ruditapes_s40303 1 1 0 0 n n n ruditapes_s40305 1 1 0 0 n n n ruditapes_s40311 1 1 kazal-type serine proteinase inhibitor 0 0 n n n ruditapes_s40326 1 1 0 0 n n n ruditapes_s40330 1 1 dopamine beta hydroxylase-like protein 0 0 n n n ruditapes_s40332 1 1 inhibitor of apoptosis protein 1 0 0 n n n ruditapes_s40345 1 1 calmodulin-like 3 /// 0005515 // protein binding /// 0044424 // intracellular part 0 0 n n n ruditapes_s40352 1 1 0 0 n n n ruditapes_s40353 1 1 0 0 n n n ruditapes_s40355 1 1 0 0 n n n ruditapes_s40369 1 1 peptidoglycan recognition protein s3 0 0 n n n ruditapes_s40375 1 1 0 0 n n n ruditapes_s40377 1 1 0 0 n n n ruditapes_s40379 1 1 0 0 n n n ruditapes_s40381 1 1 0 0 n n n ruditapes_s40386 1 1 0 0 n n n ruditapes_s40388 1 1 achain crystal structure of tapes japonica lysozyme 0 0 n n n ruditapes_s40395 1 1 0 0 n n n ruditapes_s40400 1 1 0 0 n n n ruditapes_s40403 1 1 0 0 n n n ruditapes_s40417 1 1 0 0 n n n ruditapes_s40421 1 1 0 0 n n n ruditapes_s40425 1 1 ubiquinol-cytochrome c reductase complex 11 kda 0 0 n n n ruditapes_s40436 1 1 0 0 n n n ruditapes_s40439 1 1 0 0 n n n ruditapes_s40456 1 1 caveolin 3 0 0 n n n ruditapes_s40467 1 1 0 0 n n n ruditapes_c6709 -16.882 3.7E-320 "1,752.72" 103.824 n y n